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maint_debian-med package set for unstable/armhf

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package set maint_debian-med in unstable/armhf
The package set maint_debian-med in unstable/armhf consists of 721 packages:
None 72 (10.0%) packages failed to build reproducibly: libminc ctsim flexbar mapsembler2 prime-phylo cyvcf2 mothur ragout shapeit4 ncbi-blast+ dicom3tools librostlab clustalo emboss exonerate freecontact cassiopee librostlab-blast hilive murasaki sleepyhead plip htslib## oscar orthanc primer3 segemehl python-biopython pdb2pqr loki libpll lambda-align librcsb-core-wrapper mcl raster3d mia bart axe-demultiplexer treeview golang-github-dataence-porter2 libcereal gdcm libgclib microbiomeutil libzeep autodock-vina bamtools mira seqtk libqes maffilter python-deeptoolsintervals dcmtk fastp mummer orthanc-dicomweb orthanc-webviewer fastx-toolkit libace-perl vtk-dicom acedb ffindex odil metastudent-data snakemake+ g2 libchado-perl norsnet+ tm-align+ jmodeltest estscan delly
None 34 (4.7%) packages failed to build from source: pbbam# python-pysam gatb-core mash gemma bbmap last-align libgtextutils ngs-sdkP biobambam2 libmaus2 gffread python-bx ismrmrd# adapterremoval bppphyview libundead gbrowse ball bedtools ncbi-entrez-direct python-colormap qiime opensurgsim logol liblemon mriconvert gfapy bppsuite orthanc-postgresql seqan3 aghermann libsbml libics
None None None None 139 (19.3%) packages are either in depwait state, blacklisted, not for us, or cannot be downloaded: swarm-cluster parafly plast vsearch artemis soapdenovo2 bolt-lmm libstatgen python-skbio hmmer khmer rna-star kissplice sortmerna consensuscore pftools nanopolish elastix libbpp-phyl mmseqs2 libssw bwa bio-eagle fermi-lite examl bowtie bowtie2 raxml soapdenovo diamond-aligner insighttoolkit4 fis-gtm soapaligner hhsuite spoa cnvkit obitools gasic racon bioperl-run sra-sdk iqtree rapmap q2-demux sight hisat2 seqan2 praat canu python-pybedtools infernal falcon phast hinge minimac4 minia python-mne centrifuge pilon barrnap proteinortho fastqc metaphlan2 ariba freebayes sspace fw4spl quorum salmon unanimity mirtop python-gffutils python-sqt q2-types igdiscover libseqlib atropos camitk skesa ginkgocadx blasr fitgcp macsyfinder simpleitk pbalign sga plastimatch rsem python-cutadapt surankco pbgenomicconsensus tophat gubbins mhap pbdagcon pbseqlib pbbarcode trinityrnaseq python-pbcommand kineticstools iva fsm-lite beagle python-pbcore htsjdk srst2 crac pbh5tools libvcflib psortb umis seqsero ncbi-vdb libbiod tnseq-transit chromhmm giira qcumber sambamba paleomix beads discosnp mapdamage smalr q2-cutadapt q2-feature-table q2-feature-classifier htseq q2-quality-filter snap-aligner# picard-tools jellyfish berkeley-express simka relion circlator unicycler libthread-pool spades
None 476 (66.0%) packages successfully build reproducibly: abacas abyss adun.app aegean aeskulap aevol alien-hunter alter-sequence-alignment altree amap-align amide ampliconnoise andi anfo aragorn arden artfastqgenerator art-nextgen-simulation-tools assemblytics augustus autodocksuite baitfisher bali-phy bambamc bandage bart-view bcftools### beast2-mcmc beast-mcmc bedops biococoa biojava4-live biojava-live biomaj3 biomaj3-cli biomaj3-core biomaj3-daemon biomaj3-download biomaj3-process biomaj3-user biomaj3-zipkin bioperl bio-rainbow biosquid biosyntax bio-tradis bitseq boxshade brig cain camp cct cdbfasta cd-hit cfflib cgview changeo charls chromimpute ciftilib circos circos-tools clearcut clonalframe clonalframeml clonalorigin clustalw clustalx codonw coils concavity conservation-code ctdconverter ctdopts ctn cwltool cycle daligner dascrubber dawg dazzdb dcm2niix debian-med deepnano dialign dialign-t dicompyler dicomscope dindel disulfinder dnaclust dssp dwgsim ea-utils ecopcr edfbrowser edflib edtsurf eigensoft elph embassy-domainatrix embassy-domalign embassy-domsearch emboss-explorer e-mem emmax epcr epigrass fast5 fastaq fastdnaml fastlink fastml fastqtl fasttree figtree freemedforms-project fsa galileo garli gdpc genometester genometools gentle getdata gff2aplot gff2ps ghmm glam2 gnumed-client gnumed-server grabix graphlan grinder gwama gwyddion harvest-tools hmmer2 hunspell-en-med hyphy idba igor igraph imagej indelible invesalius ipig jaligner jam-lib jebl2 jellyfish1 jheatchart kalign kallisto kaptive king king-probe kma kmc kmer kmerresistance kraken kraken2 lagan lamarc lambda-align2 lefse libbio-coordinate-perl libbio-das-lite-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbioparser-dev libbpp-core libbpp-phyl-omics libbpp-popgen libbpp-qt libbpp-raa libbpp-seq libbpp-seq-omics libcolt-free-java libctapimkt libdeflate libdisorder libdivsufsort libedlib libfastahack libfreecontact-perl libgenome libgenome-model-tools-music-perl libgenome-perl libgff libgkarrays libgo-perl libgzstream libhac-java libhat-trie libhmsbeagle libhpptools libjbzip2-java libjloda-java libjung-free-java libkmlframework-java libmems libmialm libmurmurhash libmuscle libncl liboptions-java libpal-java libpsortb libquazip librandom123 librdp-taxonomy-tree-java librg-blast-parser-perl librg-exception-perl librg-utils-perl libsis-base-java libsis-jhdf5-java## libsmithwaterman libsort-key-top-perl libtabixpp libtecla libtfbs-perl libvistaio libxdf libzerg libzerg-perl libzstd ltrsift lucy macs mafft maq maqview maude mauve-aligner maxflow medicalterms melting mencal metaphlan2-data metastudent metastudent-data-2 mialmpick miaviewit microbegps milib minc-tools miniasm minimap minimap2 mipe mlv-smile mobyle mptp mrbayes mrs muscle mustang mypy nanook ncbi-seg ncbi-tools6 neobio njplot norsp nutsqlite opencfu openslide openslide-python optimir orthanc-imagej orthanc-mysql orthanc-wsi pal2nal paml papyrus paraclu parsinsert parsnp patman pbcopper pbsim pbsuite pcalendar perlprimer perm phipack phybin phylip phylonium phyml physamp phyutility phyx piler pilercr pirs pixelmed pixelmed-codec placnet plasmidomics plasmidseeker plink plink1.9 poa populations porechop poretools pp-popularity-contest prank predictnls predictprotein proalign probabel probalign probcons proda prodigal profbval profisis profnet profphd profphd-utils proftmb progressivemauve prokka prottest pscan-chip pscan-tfbs pvrg-jpeg pybigwig pycorrfit pymia pynast pyqi pyscanfcs python3-typed-ast python-avro python-bids-validator python-biom-format python-biotools python-bz2file python-cgecore python-cobra python-cogent python-colormath python-csb python-dendropy python-depinfo python-dnaio python-easydev python-fitbit python-freecontact python-geneimpacts python-hdmedians python-hl7 python-intervaltree-bio python-lzstring python-matplotlib-venn python-multipletau python-mypy-extensions python-pipdeptree python-py2bit python-pycosat python-pyfaidx python-pyflow python-pymummer python-pypubsub python-pyvcf python-rdflib-jsonld python-schema-salad python-screed python-spectra python-sqlsoup python-treetime python-xopen q2cli q2templates qrisk2 qsopt-ex qtltools radiant rambo-k rampler ray rdp-alignment rdp-classifier rdp-readseq readseq reapr repeatmasker-recon reprof rnahybrid roary roguenarok rtax ruby-rgfa runcircos-gui saint salmid samblaster samtools samtools-legacy sbmltoolbox scoary scrm scythe seaview seer seqan seqmagick seqprep seqtools sibsim4 sickle sigma-align sim4 skewer smalt smrtanalysis snap sniffles snpomatic snp-sites soapsnp socket++ sofa-framework spaced spdlog sphinxcontrib-autoprogram sprai spread-phy squizz srf ssake stacks staden staden-io-lib stringtie subread suitename sumaclust sumatra sweed swissknife tantan t-coffee theseus tifffile tigr-glimmer toil toppred trace2dbest tracetuner transdecoder transrate-tools transtermhp tree-puzzle treeviewx trim-galore trimmomatic tvc uc-echo varna vcftools velvet velvetoptimiser virulencefinder volpack wise xmedcon yaggo yaha zalign

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A # sign after the name of a package indicates that a bug is filed against it. Likewise, a + sign indicates there is a patch available, a P means a pending bug while # indicates a closed bug. In cases of several bugs, the symbol is repeated.