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maint_debian-med package set for unstable/i386

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package set maint_debian-med in unstable/i386
The package set maint_debian-med in unstable/i386 consists of 976 packages:
None 34 (3.5%) packages failed to build reproducibly: gbrowse jebl2 librostlab ncbi-blast+ macsyfinder metastudent-data pixelmed treeview consensuscore libpll iqtree mia segemehl hhsuite dcmtk ball shapeit4 hmmer parallel filtlong libamplsolver libvbz-hdf-plugin gdcm porechop twopaco tvc mmlib libsbml nipy python-trx-python dipy toil igraph dicom3tools
None 50 (5.1%) packages failed to build from source: scrm python-pbcore nim-hts aevol resfinder-db unicycler libbio-alignio-stockholm-perl libgkarrays gjh-asl-json centrifuge metaphlan seqmagick python-bioframe simde python-dicompylercore umis anfo probabel gatk-bwamem rapmap btllib libbioparser-dev heudiconv sambamba seqan3 seqan-raptor genometools python-pyani quorum unifrac-tools bbhash pyranges prime-phylo biojava6-live bcftools nitime macs ugene bifrost ncbi-igblast seqan-needle abpoa bustools cwltool pydicom flye python-biom-format phylonium snakemake nipype
None None None None 140 (14.3%) packages are either in depwait state, blacklisted, not for us, or cannot be downloaded: fis-gtm pftools ncbi-vdb soapaligner soapdenovo vg kallisto mapsembler2 elastix sra-sdk lambda-align2 soapdenovo2 wtdbg2 xenium mrtrix3 salmon libstatgen canu fastqc sspace kraken sepp qcumber smrtanalysis psortb artemis pbdagcon fsm-lite mmseqs2 plastimatch shovill blasr paleomix nthash kmerresistance parallel-fastq-dump gasic racon seqsero pizzly genomicsdb megahit beagle skesa pplacer fastp plasmidid pigx-rnaseq snpsift mecat2 seqtk umap-learn drop-seq freebayes libatomic-queue pbseqlib pbbam snpeff biojava-live jellyfish1 kma circlator rockhopper pilon libgoby-java libvcflib insighttoolkit5 python-array-api-compat tipp minimac4 king ntcard python-ete3 gdpc liblemon abyss picard-tools unifrac obitools minia rsem mash snippy shasta bmtk libmmmulti sight discosnp python-iow trinityrnaseq cnvkit mindthegap surankco python-loompy bcalm kissplice metaeuk gatb-core simka bowtie2 cat-bat snap-aligner proteinortho kleborate srst2 bowtie swarm-cluster pbcopper python-skbio python-cogent q2-feature-table q2-types q2-quality-filter q2-cutadapt q2-demux q2-taxa q2-metadata q2-dada2 q2-diversity-lib q2-alignment q2-emperor q2-fragment-insertion q2-phylogeny ariba emboss spades emperor python-cooler libcolt-free-java chromhmm diamond-aligner rna-star htsjdk spaln vsearch igv khmer q2-quality-control q2-feature-classifier q2cliP
None 752 (77.0%) packages successfully build reproducibly: abacas acedb adapterremoval adun.app aegean aeonbits-owner aghermann alien-hunter allelecount alter-sequence-alignment altree amap-align amide ampliconnoise andi any2fasta aragorn arden argh artfastqgenerator art-nextgen-simulation-tools assembly-stats assemblytics ataqv atropos augur augustus autodocksuite autodock-vina axe-demultiplexer baitfisher bali-phy bambamc bamclipper bamkit bamtools bandage barrnap bart bart-view bbmap beads beast2-mcmc beast-mcmc bedops bedtools berkeley-express bioawk biobambam2 bio-eagle biojava4-live biomaj3 biomaj3-cli biomaj3-core biomaj3-daemon biomaj3-download biomaj3-process biomaj3-user biomaj3-zipkin bioperl bioperl-run bio-rainbow biosig biosquid biosyntax bio-tradis bio-vcf bitseq bolt-lmm boxshade bppphyview bppsuite brian brig busco bwa camp capsule-maven-nextflow capsule-nextflow cassiopee castxml cct cdbfasta cd-hit cgview changeo charls chip-seq chromimpute ciftilib cif-tools circos circos-tools civetweb clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx cmtk codonw coils concavity concurrentqueue conda-package-handling conda-package-streaming conservation-code covtobed crac ctdconverter ctdopts ctffind ctn ctsim cutesv cwlformat cwltest cycle cyvcf2 daligner damapper dascrubber dawg dazzdb dcm2niix dcmstack debian-med delly density-fitness dextractor dialign dialign-t dicomnifti dicomscope disulfinder dnaclust dnapi dnarrange drmaa dssp dwgsim ea-utils ecopcr edfbrowser edflib edtsurf eegdev eigensoft elph embassy-domainatrix embassy-domalign embassy-domsearch emboss-explorer e-mem emmax epcr epigrass estscan examl exonerate fast5 fasta3 fastani fastaq fastdnaml fastlink fastml fastq-pair fastqtl fasttree fermi-lite ffindex figtree fitgcp flash flexbar freecontact fsa g2 galileo garli gatk-fermilite gemma genometester genomethreader gentle getdata gfapy gff2aplot gff2ps gffread ggd-utils ghmm gifticlib glam2 gmap gnumed-client gnumed-server grabix graphlan grinder gsort gubbins gwama gwyddion harmonypy harvest-tools hdmf hilive hinge hisat2 hmmer2 hnswlib hopscotch-map htscodecs htseq htslib hts-nim-tools hunspell-en-med hyphy icb-utils idba idseq-bench igdiscover igor iitii illustrate imagej imbalanced-learn indelible infernal insilicoseq intake invesalius ipig ismrmrd# iva ivar jaligner jam-lib jellyfish jheatchart jmodeltest kalign kaptive kineticstools king-probe klustakwik kmc kmer kraken2 lagan lamarc lamassemble lambda-align last-align lastz lefse libace-perl libargparse libargs libatomicbitvector libbigwig libbio-cluster-perl libbio-coordinate-perl libbio-das-lite-perl libbio-db-biofetch-perl libbio-db-embl-perl libbio-db-hts-perl libbio-db-ncbihelper-perl libbio-db-seqfeature-perl libbio-featureio-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbiosoup-dev libbio-tools-run-remoteblast-perl libbio-variation-perl libbitarray libbpp-core libbpp-phyl libbpp-phyl-omics libbpp-popgen libbpp-qt libbpp-raa libbpp-seq libbpp-seq-omics libcereal libchado-perl libcifpp libctapimkt libdeflate libdisorder libdistlib-java libdivsufsort libedlib libfastahack libflathashmap libfreecontact-perl libgclib libgdf libgenome libgenome-model-tools-music-perl libgenome-perl libgff libgo-perl libgtextutils libgzstream libhac-java libhat-trie libhmsbeagle libhpptools libhttp-nio-java libics libips4o libjung-free-java libkmlframework-java libla4j-java libleidenalg libmaus2 libmcfp libmems libmialm libminc libmjson-java libmmap-allocator libmurmurhash libmuscle libncl libnewuoa libomp-jonathonl liboptions-java libpal-java libpdb-redo libpj-java libpsortb libqes librandom123 librcsb-core-wrapper librdp-taxonomy-tree-java librg-blast-parser-perl librg-exception-perl librg-utils-perl librostlab-blast libsecrecy libseqlib libshrinkwrap libsis-base-java libsis-jhdf5-java libslow5lib libsmithwaterman libsort-key-top-perl libssw libstreamvbyte libtabixpp libtecla libtfbs-perl libthread-pool libvistaio libwfa2 libxdf libzeep libzerg libzerg-perl lighter loki ltrsift lucy lumpy-sv maffilter mafft malt mapdamage maq maqview maude mauve-aligner mcaller mcl medicalterms megadepth megan-ce melting mencal metabat metaphlan2-data metastudent metastudent-data-2 mhap mialmpick microbegps microbiomeutil milib minc-tools miniasm minimap minimap2 mipe mira mirtop mlv-smile mosdepth mothur mptp mrbayes mrc mricron multiqc mummer murasaki muscle muscle3 mustang nanofilt nanolyse nanook nanopolish nanostat nanosv ncbi-acc-download ncbi-entrez-direct ncbi-seg ncbi-tools6 neo neobio ngmlr nibabel nifticlib nim-kexpr nim-lapper njplot norsnet norsp nutsqlite nxtrim odil odin ont-fast5-api opencfu openslide openslide-python optimir orthanc orthanc-dicomweb orthanc-gdcm orthanc-imagej orthanc-mysql orthanc-neuro orthanc-postgresql orthanc-python orthanc-webviewer orthanc-wsi oscar pairtools pal2nal paml papyrus paraclu parafly parasail parsinsert parsnp paryfor patman patsy pbsim pbsuite pcalendar pdb2pqr peptidebuilder perlprimer perm phast phipack phybin phylip phyml physamp phyutility phyx picopore piler pilercr pinfish pique pirs pixelmed-codec placnet plasmidomics plasmidseeker plast plink plink1.9 plink2 plip poa populations poretools praat prank predictnls presto primer3 prinseq-lite proalign probalign probcons proda prodigal profbval profisis profnet profphd-utils proftmb progressivemauve prokka propka prottest provean pscan-chip pscan-tfbs psignifit psychopy pullseq pvrg-jpeg pybel pybigwig pychopper pycoqc pycorrfit pyensembl pyfastx pymia pynn pynwb pyode pyqi pyscanfcs pysurfer python-alignlib python-anndata python-bcbio-gff python-bel-resources python-bids-validator python-bioblend python-biopython python-biotools python-bx python-cgecore python-cgelib python-cigar python-cobra python-csb python-cutadapt python-cykhash python-datacache python-deeptools python-deeptoolsintervals python-dendropy python-dnaio python-epimodels python-etelemetry python-fitbit python-freecontact python-geneimpacts python-gffutils python-gtfparse python-hl7 python-hmmlearn python-intervaltree-bio python-leidenalg python-mne python-nanoget python-nanomath python-pairix python-pangolearn python-parasail python-pauvre python-pbcommand python-prefixed python-py2bit python-pybedtools python-pycosat python-pyfaidx python-pyflow python-pymummer python-pysam python-pyspoa python-pyvcf python-questplus python-ruffus python-scitrack python-screed python-sqt python-tinyalign python-treetime python-wdlparse pyxid pyxnat q2-sample-classifier q2templates qcat qiime qrisk2 qsopt-ex qtltools quicktree quitcount radiant ragout rambo-k rampler raster3d rate4site raxml ray rdp-alignment rdp-classifier rdp-readseq readerwriterqueue readseq readucks reapr recan relacy relion repeatmasker-recon reprof resfinder rnahybrid roary roguenarok routine-update rtax ruby-rgfa runcircos-gui saint salmid samblaster samclip samtools samtools-legacy savvy sbmltoolbox scoary scrappie scythe seaview seer seirsplus seqan2 seqkit seqprep seqtools seriation setcover sga sibelia sibsim4 sickle sigma-align sigviewer sim4 simrisc ska skewer smalt snap sniffles snpomatic snp-sites soapsnp socket++ sorted-nearest sortmerna spaced spdlog spoa sprai spread-phy squizz srf ssake ssshtest stacks staden staden-io-lib stringtie subarch-select subread suitename sumaclust sumalibs sumatra surpyvor survivor svim sweed swissknife tantan tao-config tao-json t-coffee terraphast theseus thesias tiddit tigr-glimmer tm-align tnseq-transit tombo toml11 tophat-recondition toppred tortoize trace2dbest tracetuner transdecoder transrate-tools transtermhp tree-puzzle treeviewx trf trim-galore trimmomatic trinculo uc-echo uncalled unikmer varna vcfanno vcftools velvet velvetoptimiser veryfasttree virulencefinder vmatch volpack vt vtk-dicom wham-align wise xdffileio xmedcon xpore xxsds-dynamic yaggo yaha yanagiba yanosim

A package name displayed with a bold font is an indication that this package has a note. Visited packages are linked in green, those which have not been visited are linked in blue.
A # sign after the name of a package indicates that a bug is filed against it. Likewise, a + sign indicates there is a patch available, a P means a pending bug while # indicates a closed bug. In cases of several bugs, the symbol is repeated.