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maint_debian-med package set for bullseye/i386

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package set maint_debian-med in bullseye/i386
The package set maint_debian-med in bullseye/i386 consists of 772 packages:
None 47 (6.1%) packages failed to build reproducibly: treeview fastp kalign ncbi-blast+ porechop insighttoolkit4 python-pysam libdeflate raster3d fis-gtm filtlong ngs-sdk camitk minia flexbar hmmer emboss bali-phy python-cogent gbrowse mapsembler2 segemehl ginkgocadx mira consensuscore loki librostlab jmodeltest logol tvc shapeit4 htslib## librcsb-core-wrapper ball bart qtltools+ macs libsbml gdcm libzeep python-deeptoolsintervals mothur spaln dicom3tools ragout mummer phast
None 40 (5.2%) packages failed to build from source: seqmagick racon resfinder-db kleborate mmseqs2 python-pbcore libbioparser-dev skesa libla4j-java spades proteinortho conda-package-handling mypy liboptions-java bbhash ngmlr vt python-pyani umap-learn python-streamz vg pplacer dextractor libsmithwaterman mash libbpp-phyl gatb-core python-skbio libbiod microbiomeutil bustools seqan2 nibabel libmaus2 ncbi-vdb pydicom bedtools nitime seqan3 metastudent-data
None None None None 51 (6.6%) packages are either in depwait state, blacklisted, not for us, or cannot be downloaded: swarm-cluster plast artemis soapaligner soapdenovo2 rapmap pftools bowtie2 sra-sdk circlator picard-tools libstatgen cnvkit vsearch kissplice rna-star snap-aligner jellyfish hhsuite gmap# soapdenovo bowtie obitools pbcopper lambda-align2 centrifuge barrnap fsm-lite drop-seq srst2 roary minimac4 metaphlan2 seqsero quorum psortb sspace salmon trinityrnaseq rsem python-gffutils qcumber python-pybedtools unicycler crac gasic mirtop python-ncls sambamba python-ete3 ariba
None 634 (82.1%) packages successfully build reproducibly: abacas abyss acedb adapterremoval adun.app aegean aeskulap aevol aghermann alien-hunter allelecount alter-sequence-alignment altree amap-align ampliconnoise anfo aragorn arcp arden artfastqgenerator art-nextgen-simulation-tools assembly-stats assemblytics ataqv atropos augur augustus autodocksuite autodock-vina axe-demultiplexer baitfisher bambamc bamkit bamtools bandage bart-view bbmap bcalm bcftools### beads beagle beast2-mcmc beast-mcmc bedops berkeley-express biococoa bio-eagle biojava4-live biojava-live biomaj3 biomaj3-cli biomaj3-core biomaj3-daemon biomaj3-download biomaj3-process biomaj3-user biomaj3-zipkin bioperl bio-rainbow biosig4c++ biosquid biosyntax bio-tradis bitseq bolt-lmm boxshade bppphyview bppsuite brig busco bwa camp canu cassiopee cat-bat cct cdbfasta cd-hit cgview changeo charls chip-seq chromhmm chromimpute ciftilib circos circos-tools clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx codonw coils concavity conservation-code covtobed ctdconverter ctdopts ctn ctsim cwltool cyvcf2 daligner dascrubber dawg dazzdb dcm2niix dcmtk debian-med deepnano delly dialign dialign-t diamond-aligner dicompyler dicomscope dindel discosnp disulfinder dnaclust dnapi dssp dwgsim ea-utils ecopcr edfbrowser edflib edtsurf eigensoft elastix elph embassy-domainatrix embassy-domalign embassy-domsearch emboss-explorer e-mem emmax enlighten epcr epigrass estscan examl exonerate fast5 fasta3 fastaq fastdnaml fastlink fastml fastqtl fasttree fermi-lite ffindex figtree fitgcp flash freebayes freecontact fsa g2 galileo garli gdpc genometester genomethreader genometools gentle getdata gfapy gff2aplot gff2ps gffread glam2 gnumed-client gnumed-server golang-github-dataence-porter2 grabix graphlan grinder gubbins gwama gwyddion harvest-tools hdmf hilive hinge hisat2 hmmer2 hopscotch-map htscodecs htseq htsjdk hunspell-en-med idba igdiscover igor igraph imagej indelible infernal intake invesalius ipig iqtree ismrmrd# iva ivar jaligner jam-lib jebl2 jellyfish1 jheatchart kallisto kaptive kineticstools king king-probe kma kmc kmer kmerresistance kraken kraken2 lagan lamarc lambda-align last-align lastz lefse libace-perl libatomicbitvector libbigwig libbio-alignio-stockholm-perl libbio-cluster-perl libbio-coordinate-perl libbio-das-lite-perl libbio-db-hts-perl libbio-featureio-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbio-tools-run-remoteblast-perl libbpp-core libbpp-phyl-omics libbpp-popgen libbpp-qt libbpp-raa libbpp-seq libbpp-seq-omics libcereal libchado-perl libcolt-free-java libctapimkt libdistlib-java libdivsufsort libedlib libfastahack libfreecontact-perl libgclib libgenome libgenome-model-tools-music-perl libgenome-perl libgff libgkarrays libgo-perl libgzstream libhac-java libhat-trie libhmsbeagle libhpptools libics libips4o libjbzip2-java libjloda-java libjung-free-java libkmlframework-java liblemon libmems libmialm libminc libmmap-allocator libmurmurhash libmuscle libncl libpal-java libpll libpsortb libqes libquazip librandom123 librdp-taxonomy-tree-java librg-blast-parser-perl librg-exception-perl librg-utils-perl librostlab-blast libseqlib libsis-base-java libsort-key-top-perl libssw libtabixpp libtecla libtfbs-perl libthread-pool libundead libvcflib libvistaio libxdf libzerg libzerg-perl libzstd lighter ltrsift lucy maffilter mafft mapdamage maq maqview maude mauve-aligner mcl medicalterms melting mencal metabat metaphlan2-data metastudent metastudent-data-2 mhap miaviewit microbegps milib minc-tools mindthegap miniasm minimap minimap2 mipe mlv-smile mptp mrbayes# mriconvert mrs multiqc murasaki muscle mustang nanofilt nanook nanopolish nanosv ncbi-acc-download ncbi-entrez-direct ncbi-seg ncbi-tools6 neobio njplot norsp nutsqlite odil openslide openslide-python opensurgsim optimir orthanc orthanc-dicomweb orthanc-imagej orthanc-mysql orthanc-postgresql orthanc-python orthanc-webviewer orthanc-wsi oscar pairtools pal2nal paml papyrus paraclu parafly parasail parsinsert parsnp paryfor patman patsy pbsim pcalendar pdb2pqr perlprimer perm phipack phybin phylip phylonium phyml physamp phyutility phyx piler pilercr pilon pirs pixelmed pixelmed-codec placnet plasmidomics plasmidseeker plastimatch plink plink1.9 plink2 plip poa populations poretools pp-popularity-contest praat prank predictnls presto prime-phylo primer3 prinseq-lite proalign probabel probalign probcons proda prodigal profphd-utils proftmb progressivemauve prottest pscan-chip pscan-tfbs psychopy pvrg-jpeg pybel pybigwig pychopper pycoqc pymia pyqi pyrle pyscanfcs python3-typed-ast python-avro python-bcbio-gff python-bel-resources python-bids-validator python-biom-format python-biopython python-biotools python-bx python-bz2file python-cgecore python-ciso8601 python-cobra python-colormap python-colormath python-csb python-cutadapt python-deeptools python-dendropy python-depinfo python-dicompylercore python-dnaio python-easydev python-etelemetry python-fitbit python-freecontact python-geneimpacts python-hdmedians python-hl7 python-lzstring python-matplotlib-venn python-mne python-multipletau python-multisplitby python-mypy-extensions python-nanoget python-nanomath python-parasail python-pauvre# python-pbcommand python-pipdeptree python-py2bit python-pycosat python-pyfaidx python-pyflow python-pymummer python-pypubsub python-pyvcf python-questplus python-rdflib-jsonld python-ruffus python-schema-salad python-scitrack python-screed python-spectra python-sqlsoup python-sqt python-tinyalign python-treetime python-wordcloud python-xopen pyxid pyxnat q2templates qcat qrisk2 qsopt-ex quicktree radiant rambo-k rampler rate4site raxml ray rdp-alignment rdp-classifier rdp-readseq readerwriterqueue readseq readucks reapr recan repeatmasker-recon reprof resfinder rnahybrid roguenarok routine-update rtax ruby-rgfa runcircos-gui saint salmid samblaster samclip samtools samtools-legacy sbmltoolbox scoary scrm scythe seaview seer seirsplus seqan seqtk seqtools sga sibsim4 sickle sight sigma-align sim4 simde skewer smalt smart-open snakemake# snap sniffles snpomatic snp-sites soapsnp socket++ sorted-nearest sortmerna spaced spdlog sphinxcontrib-autoprogram spoa sprai spread-phy squizz srf ssake stacks staden staden-io-lib stringtie subread suitename sumaclust sumalibs sumatra surankco sweed swissknife tantan tao-config tao-json t-coffee theseus thesias tiddit tigr-glimmer tm-align tnseq-transit toil tophat-recondition toppred trace2dbest tracetuner transdecoder transrate-tools transtermhp treeviewx trim-galore trimmomatic trinculo uc-echo umis varna vcftools velvet velvetoptimiser virulencefinder vmatch volpack vtk-dicom wise wtdbg2 xmedcon yaggo yaha yanagiba zalign

A package name displayed with a bold font is an indication that this package has a note. Visited packages are linked in green, those which have not been visited are linked in blue.
A # sign after the name of a package indicates that a bug is filed against it. Likewise, a + sign indicates there is a patch available, a P means a pending bug while # indicates a closed bug. In cases of several bugs, the symbol is repeated.