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maint_debian-med package set for bookworm/i386

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package set maint_debian-med in bookworm/i386
The package set maint_debian-med in bookworm/i386 consists of 926 packages:
None 50 (5.4%) packages failed to build reproducibly: gatb-core hmmer emboss nipype mia python-pybedtools+ libsbml mira gdcm treeview ncbi-blast+ insighttoolkit4 logol brian last-align segemehl parallel bali-phy htslib jellyfish libvbz-hdf-plugin python-cogent tree-puzzle python-anndata fis-gtm nipy minimap2 shapeit4 minia metastudent-data ball python-pairix+ macs freebayes librostlab macsyfinder libdeflate libamplsolver tvc hhsuite gbrowse filtlong centrifuge ginkgocadx dicom3tools libzeep ngs-sdk porechop spaln cif-tools
None 38 (4.1%) packages failed to build from source: umap-learn pyranges resfinder-db libbioparser-dev python-pbcore spades picard-tools gjh-asl-json bioawk libmaus2 spdlog pynn pplacer bbhash skesa scrappie mypy ncbi-vdb python-streamz opensurgsim nim-hts tnseq-transit xenium quorum bustools samclip illustrate python-biom-format sorted-nearest rapmap orthanc-wsi seqan3 python-skbio acedb canu staden scrm libbiod
None None None None 80 (8.6%) packages are either in depwait state, blacklisted, not for us, or cannot be downloaded: artemis mecat2 lambda-align2 libstatgen pftools soapaligner vg swarm-cluster bmtk python-pynndescent rna-star mapsembler2 gdpc vsearch prokka sra-sdk megahit khmer mrtrix3 diamond-aligner bowtie2 bowtie snap-aligner python-loompy circlator kissplice soapdenovo soapdenovo2 kma salmon cnvkit mmseqs2 pbcopper obitools mash fsm-lite q2-quality-control shovill q2-taxa pbseqlib q2-demux libatomic-queue blasr q2-quality-filter q2-alignment king metaphlan2 libmmmulti pbdagcon smrtanalysis plasmidid psortb proteinortho qcumber paleomix sspace shasta rsem q2-metadata minimac4 gasic pbbam srst2 q2-types ariba q2-cutadapt unicycler parallel-fastq-dump sambamba q2-dada2 q2-feature-classifier kleborate cat-bat unifrac q2-feature-table sepp seqsero pigx-rnaseq# trinityrnaseq python-ete3
None 758 (81.9%) packages successfully build reproducibly: abacas abyss adapterremoval adun.app aegean aeskulap aevol aghermann alien-hunter allelecount alter-sequence-alignment altree amap-align amide ampliconnoise andi anfo aragorn arcp arden argh artfastqgenerator art-nextgen-simulation-tools assembly-stats assemblytics ataqv atropos augur augustus autodocksuite autodock-vina axe-demultiplexer baitfisher bambamc bamclipper bamkit bamtools bandage barrnap bart bart-view bbmap bcalm bcftools### beads beagle beast2-mcmc beast-mcmc bedops bedtools berkeley-express biobambam2 biococoa bio-eagle biojava4-live biojava-live biomaj3 biomaj3-cli biomaj3-core biomaj3-daemon biomaj3-download biomaj3-process biomaj3-user biomaj3-zipkin bioperl bioperl-run bio-rainbow biosig biosquid biosyntax bio-tradis bio-vcf bitseq bolt-lmm boxshade bppphyview bppsuite brig busco bwa camitk camp capsule-maven-nextflow capsule-nextflow cassiopee cct cdbfasta cd-hit cgview changeo charls chip-seq chromhmm chromimpute ciftilib circos circos-tools civetweb clearcut clonalframe clonalframeml clonalorigin clustalo clustalw codonw coils concavity concurrentqueue conda-package-handling conservation-code covtobed crac ctdconverter ctdopts ctn ctsim cwlformat cwltool cyvcf2 daligner damapper dascrubber dawg dazzdb dcm2niix dcmtk debian-med deepnano delly density-fitness dextractor dialign dialign-t dicomnifti dicomscope dipy discosnp disulfinder dnaclust dnapi drop-seq dssp dwgsim ecopcr edfbrowser edflib edtsurf eegdev eigensoft elastix elph embassy-domainatrix embassy-domalign embassy-domsearch emboss-explorer e-mem emmax enlighten epcr epigrass estscan examl exonerate fast5 fasta3 fastani fastaq fastdnaml fastlink fastml fastp fastqc fastq-pair fastqtl fasttree fermi-lite ffindex figtree fitgcp flash flexbar freecontact fsa g2 galileo garli gemma genometester genomethreader genometools gentle getdata gfapy gff2aplot gff2ps gffread ggd-utils ghmm gifticlib glam2 gmap gnumed-client gnumed-server golang-github-dataence-porter2 grabix graphlan grinder gsort gubbins gwama gwyddion h5sparse harvest-tools hdmf hilive hinge hisat2 hmmer2 hnswlib hopscotch-map htscodecs htseq htsjdk hts-nim-tools hunspell-en-med hyphy icb-utils idba idseq-bench igdiscover igor igraph iitii imagej indelible indexed-gzip infernal insilicoseq intake invesalius ipig iqtree ismrmrd# ivar jaligner jam-lib jebl2 jellyfish1 jheatchart jmodeltest kalign kallisto kaptive kineticstools king-probe klustakwik kmc kmer kmerresistance kraken kraken2 lagan lamarc lambda-align lastz lefse libace-perl libargs libatomicbitvector libbigwig libbio-alignio-stockholm-perl libbio-cluster-perl libbio-coordinate-perl libbio-das-lite-perl libbio-db-biofetch-perl libbio-db-embl-perl libbio-db-hts-perl libbio-db-ncbihelper-perl libbio-featureio-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbio-tools-run-remoteblast-perl libbio-variation-perl libbpp-core libbpp-phyl libbpp-phyl-omics libbpp-popgen libbpp-qt libbpp-raa libbpp-seq libcereal libchado-perl libcifpp libcolt-free-java libctapimkt libdisorder libdistlib-java libdivsufsort libedlib libfastahack libflathashmap libfreecontact-perl libgclib libgenome libgenome-model-tools-music-perl libgenome-perl libgff libgkarrays libgo-perl libgtextutils libgzstream libhac-java libhat-trie libhmsbeagle libhpptools libics libips4o libjbzip2-java libjloda-java libjung-free-java libkmlframework-java libla4j-java liblemon libmems libmialm libminc libmmap-allocator libmurmurhash libmuscle libncl libnewuoa liboptions-java libpal-java libpdb-redo libpj-java libpll libpsortb libqes librandom123 librcsb-core-wrapper librdp-taxonomy-tree-java librg-blast-parser-perl librg-exception-perl librg-utils-perl librostlab-blast libsecrecy libseqlib libsis-base-java libsis-jhdf5-java libsmithwaterman libsort-key-top-perl libssw libstreamvbyte libtabixpp libtecla libtfbs-perl libthread-pool libvcflib libvistaio libxdf libzerg libzerg-perl libzstd lighter loki ltrsift lucy lumpy-sv maffilter mafft mapdamage maq maqview maude mauve-aligner mcl medicalterms melting mencal metabat metaphlan2-data metastudent metastudent-data-2 mhap mialmpick miaviewit microbegps microbiomeutil milib minc-tools mindthegap miniasm minimap mipe mirtop mlv-smile mosdepth mothur mptp mrbayes mrc mriconvert mricron multiqc mummer murasaki muscle mustang nanofilt nanolyse nanook nanopolish nanostat nanosv ncbi-acc-download ncbi-entrez-direct ncbi-seg ncbi-tools6 neo neobio ngmlr nibabel nifti2dicom nifticlib nim-kexpr nim-lapper njplot norsnet norsp ntcard nthash nutsqlite nxtrim odil odin ont-fast5-api opencfu openslide openslide-python optimir orthanc orthanc-dicomweb orthanc-gdcm orthanc-imagej orthanc-mysql orthanc-postgresql orthanc-python orthanc-webviewer oscar pairtools pal2nal paml papyrus paraclu parafly parasail parsinsert parsnp paryfor patman patsy pbsim pbsuite pcalendar pdb2pqr peptidebuilder perm phast phipack phybin phylip phylonium phyml phyutility phyx picopore piler pilercr pilon pinfish pique pirs pixelmed pixelmed-codec pizzly placnet plasmidomics plast plastimatch plink plink1.9 plink2 plip poa populations poretools pp-popularity-contest praat prank predictnls presto prime-phylo primer3 prinseq-lite proalign probabel probalign probcons proda prodigal profbval profisis profnet profphd-utils proftmb progressivemauve prottest pscan-chip pscan-tfbs psignifit psychopy pullseq pvrg-jpeg pybel pybigwig pychopper pycoqc pycorrfit pyensembl pymia pyode pyqi pyrle pyscanfcs pysurfer python-alignlib python-avro python-bcbio-gff python-bel-resources python-bids-validator python-biopython python-biotools python-bx python-bz2file python-cgecore python-cigar python-ciso8601 python-cobra python-colormap python-colormath python-csb python-cutadapt python-datacache python-deeptools python-deeptoolsintervals python-dendropy python-depinfo python-dicompylercore python-dnaio python-duckpy python-easydev python-epimodels python-etelemetry python-fitbit python-freecontact python-geneimpacts python-gffutils python-gtfparse python-hdmedians python-hl7 python-intervaltree-bio python-leidenalg python-lzstring python-matplotlib-venn python-mne python-multipletau python-multisplitby python-nanoget python-nanomath python-ncls python-parasail python-pauvre python-pbcommand python-pipdeptree python-py2bit python-pyani python-pycosat python-pyfaidx python-pyflow python-pymummer python-pypubsub python-pysam python-pyspoa python-pyvcf python-questplus python-ruffus python-scitrack python-screed python-sinfo python-spectra python-sqlsoup python-stdlib-list python-stubserver python-tinyalign python-treetime python-typechecks python-upsetplot python-wdlparse python-wordcloud python-xopen pyxid pyxnat q2cli q2templates qcat qrisk2 qsopt-ex qtltools quicktree quitcount racon radiant rambo-k raster3d rate4site raxml ray rdp-alignment rdp-classifier rdp-readseq readerwriterqueue readseq readucks reapr recan relacy relion repeatmasker-recon reprof resfinder rnahybrid roary roguenarok routine-update rtax ruby-rgfa runcircos-gui saint salmid samblaster samtools samtools-legacy sbmltoolbox scoary scythe seaview seer seirsplus seqan2 seqkit seqmagick seqprep seqtk seqtools seriation sga sibelia sibsim4 sickle sigma-align sigviewer sim4 simde simka simrisc skewer smalt smart-open snakemake snap sniffles snpomatic snp-sites soapsnp socket++ sortmerna spaced sphinxcontrib-autoprogram spoa sprai spread-phy squizz srf ssake ssshtest stacks staden-io-lib stringtie subread suitename sumaclust sumalibs sumatra surankco survivor svim sweed swissknife tantan tao-config tao-json t-coffee theseus thesias tiddit tigr-glimmer tm-align toil tombo tophat-recondition toppred tortoize trace2dbest tracetuner transdecoder transrate-tools transtermhp treeviewx trf trim-galore trimmomatic trinculo uc-echo umis uncalled unikmer varna vcfanno vcftools velvet velvetoptimiser virulencefinder vmatch volpack vt vtk-dicom wham-align wise wtdbg2 xdffileio xmedcon xpore yaggo yaha yanagiba yanosim zalign

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