maint_debian-med package set for buster/i386

• All tracked package sets for buster/i386

The package set maint_debian-med in buster/i386 consists of 675 packages:
46 (6.8%) packages failed to build reproducibly: gdcm dicom3tools metastudent-data raster3d mapsembler2 gatb-core orthanc-webviewer fis-gtm orthanc ffindex mcl bart mira tvc librostlab fastx-toolkit jmodeltest ncbi-blast+ sleepyhead pixelmed logol iqtree macsyfinder emboss phast camitk python-biopython flexbar libdeflate ginkgocadx toil fastp gbrowse+ mummer microbiomeutil lambda-align treeview librcsb-core-wrapper ball mothur consensuscore libsbml cdbfasta porechop htslib genometools
7 (1.0%) packages failed to build from source: libbioparser-dev gemma libmurmurhash simpleitk jellyfish ncbi-vdb seqan2
103 (15.3%) packages are either in depwait state, blacklisted, not for us, or cannot be downloaded: pftools parafly hhsuite bolt-lmm libstatgen bwa cnvkit bowtie2 hisat2 diamond-aligner fermi-lite khmer kissplice vsearch soapdenovo bowtie rna-star soapaligner swarm-cluster plast snap-aligner spoa obitools soapdenovo2 artemis circlator picard-tools libssw sra-sdk delly python-sqt segemehl pbh5tools nanopolish pbbam canu fitgcp python-pbcommand python-pysam python-pbcore centrifuge kineticstools reapr fastaq bcftools dwgsim libseqlib iva qtltools srst2 crac minimac4 freebayes bio-eagle tnseq-transit qcumber fsm-lite unanimity bioperl-run pbgenomicconsensus psortb pbseqlib cyvcf2 pbalign pbdagcon trinityrnaseq bcbio rapmap blasr python-pybedtools hinge python-gffutils paleomix smalt libtabixpp mhap barrnap samtools smalr spades seqsero bedtools ariba rsem tophat fastqtl libvcflib gasic stacks htseq python-pymummer hilive unicycler sga pbbarcode giira quorum racon sspace metaphlan2 salmon grabix augustus
519 (76.9%) packages successfully build reproducibly: abacas abyss acedb adapterremoval adun.app aegean aeskulap aevol aghermann alien-hunter alter-sequence-alignment altree amap-align amide ampliconnoise andi anfo aragorn arden artfastqgenerator art-nextgen-simulation-tools assemblytics autodocksuite autodock-vina axe-demultiplexer baitfisher bali-phy bambamc bamtools bandage bart-view beads beagle beast2-mcmc beast-mcmc bedops berkeley-express biococoa biojava4-live biojava-live biomaj3 biomaj3-cli biomaj3-core biomaj3-daemon biomaj3-download biomaj3-process biomaj3-user biomaj3-zipkin bioperl bio-rainbow biosquid biosyntax bio-tradis bitseq boxshade bppphyview bppsuite brig cain camp cassiopee cct cd-hit cfflib cgview changeo charls chromhmm chromimpute ciftilib circos circos-tools clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx codonw coils concavity conservation-code ctdconverter ctdopts ctn ctsim cwltool cycle daligner dascrubber dawg dazzdb dcm2niix dcmtk debian-med deepnano dialign dialign-t dicompyler dicomscope dindel discosnp disulfinder dnaclust dssp ea-utils ecopcr edfbrowser edflib edtsurf eigensoft elastix elph embassy-domainatrix embassy-domalign embassy-domsearch emboss-explorer e-mem epcr estscan examl exonerate fast5 fastdnaml fastlink fastml fastqc fasttree figtree freecontact freemedforms-project fsa fw4spl g2 galileo garli gdpc genometester gentle getdata gfapy gff2aplot gff2ps ghmm glam2 gnumed-client gnumed-server golang-github-dataence-porter2 graphlan grinder gubbins gwama gwyddion harvest-tools hmmer hmmer2 htsjdk hunspell-en-med hyphy idba igor igraph imagej imagevis3d indelible infernal insighttoolkit4 invesalius ipig ismrmrd# jaligner jam-lib jebl2 jellyfish1 jheatchart kalign king king-probe kmc kmer kraken lagan lamarc lambda-align2 last-align lefse libace-perl libbio-coordinate-perl libbio-das-lite-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbpp-core libbpp-phyl libbpp-phyl-omics libbpp-popgen libbpp-qt libbpp-raa libbpp-seq libbpp-seq-omics libcereal libchado-perl libcolt-free-java libctapimkt libdisorder libdivsufsort libedlib libfastahack libfreecontact-perl libgenome libgenome-model-tools-music-perl libgenome-perl libgff libgkarrays libgo-perl libgtextutils libgzstream libhac-java libhat-trie libhmsbeagle libhpptools libics libjbzip2-java libjloda-java libjung-free-java libkmlframework-java liblemon libmems libmialm libminc libmuscle libncl liboptions-java libpal-java libpll libpsortb libqes libquazip librandom123 librdp-taxonomy-tree-java librg-blast-parser-perl librg-exception-perl librg-utils-perl librostlab-blast libsis-base-java libsmithwaterman libsort-key-top-perl libtecla libtfbs-perl libthread-pool libundead libvistaio libxdf libzeep libzerg libzerg-perl libzstd loki ltrsift lucy macs maffilter mafft mapdamage maq maqview mash maude mauve-aligner maxflow medicalterms melting mencal metaphlan2-data metastudent metastudent-data-2 mia mialmpick miaviewit microbegps milib minc-tools minia miniasm minimap minimap2 mipe mlv-smile mobyle mobyle-programs mobyle-tutorials mptp mrbayes mriconvert mrs murasaki muscle mustang mypy nanook ncbi-entrez-direct ncbi-seg ncbi-tools6 neobio ngs-sdk njplot norsnet norsp nutsqlite odil opencfu openslide openslide-python opensurgsim orthanc-dicomweb orthanc-imagej orthanc-mysql orthanc-postgresql orthanc-wsi pal2nal paml papyrus paraclu parsinsert parsnp patman pbcopper pbsim pbsuite pcalendar pdb2pqr perlprimer perm phipack phybin phylip phyml physamp phyutility phyx piler pilon pirs pixelmed-codec placnet plasmidomics plasmidseeker plastimatch plink plink1.9 plip poa pondus populations poretools pp-popularity-contest praat prank predictnls predictprotein prime-phylo primer3 proalign probabel probalign probcons proda prodigal profbval profisis profnet profphd profphd-utils proftmb progressivemauve proteinortho prottest pscan-chip pscan-tfbs pvrg-jpeg pycorrfit pymia pynast pyqi pyscanfcs python3-typed-ast python-avro python-biom-format python-biotools python-burrito python-bx python-bz2file python-clips python-cobra python-cogent python-colormap python-colormath python-csb python-cutadapt python-dendropy python-depinfo python-easydev python-fitbit python-freecontact python-hdmedians python-hl7 python-intervaltree-bio python-lzstring python-matplotlib-venn python-mne python-multipletau python-mypy-extensions python-pipdeptree python-pyfaidx python-pyflow python-pyvcf python-qcli python-rdflib-jsonld python-ruffus python-schema-salad python-screed python-spectra python-sqlsoup python-treetime python-xopen qrisk2 qsopt-ex radiant rambo-k rampler rate4site raxml ray rdp-alignment rdp-classifier rdp-readseq readseq relion repeatmasker-recon reprof rnahybrid roary roguenarok rtax ruby-rgfa runcircos-gui saint salmid samblaster samtools-legacy sbmltoolbox scoary scrm scythe seaview seer seqan seqmagick seqprep seqtk seqtools sibsim4 sickle sigma-align sim4 snakemake snap sniffles snpomatic snp-sites soapsnp socket++ sofa-framework sortmerna spaced spdlog sphinxcontrib-autoprogram sprai spread-phy squizz srf ssake staden staden-io-lib subread suitename sumaclust sumatra surankco sweed swissknife tantan t-coffee theseus tifffile tigr-glimmer tm-align toppred trace2dbest tracetuner transdecoder transrate-tools transtermhp tree-puzzle treeviewx trimmomatic uc-echo varna vcftools velvet velvetoptimiser volpack vtk-dicom wise xmedcon yaggo yaha zalign

A package name displayed with a bold font is an indication that this package has a note. Visited packages are linked in green, those which have not been visited are linked in blue.
A # sign after the name of a package indicates that a bug is filed against it. Likewise, a + sign indicates there is a patch available, a P means a pending bug while # indicates a closed bug. In cases of several bugs, the symbol is repeated.