maint_debian-med package set for buster/arm64

• All tracked package sets for buster/arm64

The package set maint_debian-med in buster/arm64 consists of 675 packages:
30 (4.4%) packages failed to build reproducibly: sleepyhead logol emboss mummer treeview microbiomeutil flexbar libsbml macsyfinder crac qtltools python-biopython mira librostlab gdcm fastx-toolkit ncbi-entrez-direct toil jmodeltest gatb-core grabix gbrowse+ pixelmed dicom3tools mapsembler2 metastudent-data ball raster3d ncbi-blast+ htslib
5 (0.7%) packages failed to build from source: ngs-sdk libmurmurhash minimap2 libundead seqan2
75 (11.1%) packages are either in depwait state, blacklisted, not for us, or cannot be downloaded: relion plink1.9 fermi-lite plast nanopolish swarm-cluster soapdenovo2 soapaligner insighttoolkit4 consensuscore libstatgen libssw iqtree infernal sortmerna bolt-lmm diamond-aligner spoa obitools artemis circlator picard-tools bwa cnvkit pftools hisat2 vsearch hhsuite bowtie2 sra-sdk elastix fis-gtm bio-eagle hmmer raxml examl soapdenovo centrifuge canu seqsero surankco fw4spl gubbins chromhmm plastimatch qcumber unicycler psortb libseqlib pilon trinityrnaseq ginkgocadx minimac4 salmon bioperl-run racon pbgenomicconsensus paleomix simpleitk mhap metaphlan2 beagle fastqc gasic camitk spades libvcflib barrnap htsjdk giira srst2 ariba tnseq-transit freebayes ncbi-vdb
565 (83.7%) packages successfully build reproducibly: abacas abyss acedb adapterremoval adun.app aegean aeskulap aevol aghermann alien-hunter alter-sequence-alignment altree amap-align amide ampliconnoise andi anfo aragorn arden artfastqgenerator art-nextgen-simulation-tools assemblytics augustus autodocksuite autodock-vina axe-demultiplexer baitfisher bali-phy bambamc bamtools bandage bart bart-view bcbio bcftools beads beast2-mcmc beast-mcmc bedops bedtools berkeley-express biococoa biojava4-live biojava-live biomaj3 biomaj3-cli biomaj3-core biomaj3-daemon biomaj3-download biomaj3-process biomaj3-user biomaj3-zipkin bioperl bio-rainbow biosquid biosyntax bio-tradis bitseq blasr bowtie boxshade bppphyview bppsuite brig cain camp cassiopee cct cdbfasta cd-hit cfflib cgview changeo charls chromimpute ciftilib circos circos-tools clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx codonw coils concavity conservation-code ctdconverter ctdopts ctn ctsim cwltool cycle cyvcf2 daligner dascrubber dawg dazzdb dcm2niix dcmtk debian-med deepnano delly dialign dialign-t dicompyler dicomscope dindel discosnp disulfinder dnaclust dssp dwgsim ea-utils ecopcr edfbrowser edflib edtsurf eigensoft elph embassy-domainatrix embassy-domalign embassy-domsearch emboss-explorer e-mem epcr estscan exonerate fast5 fastaq fastdnaml fastlink fastml fastp fastqtl fasttree ffindex figtree fitgcp freecontact freemedforms-project fsa fsm-lite g2 galileo garli gdpc gemma genometester genometools gentle getdata gfapy gff2aplot gff2ps ghmm glam2 gnumed-client gnumed-server golang-github-dataence-porter2 graphlan grinder gwama gwyddion harvest-tools hilive hinge hmmer2 htseq hunspell-en-med hyphy idba igor igraph imagej imagevis3d indelible invesalius ipig ismrmrd# iva jaligner jam-lib jebl2 jellyfish jellyfish1 jheatchart kalign khmer kineticstools king king-probe kissplice kmc kmer kraken lagan lamarc lambda-align lambda-align2 last-align lefse libace-perl libbio-coordinate-perl libbio-das-lite-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbioparser-dev libbpp-core libbpp-phyl libbpp-phyl-omics libbpp-popgen libbpp-qt libbpp-raa libbpp-seq libbpp-seq-omics libcereal libchado-perl libcolt-free-java libctapimkt libdeflate libdisorder libdivsufsort libedlib libfastahack libfreecontact-perl libgenome libgenome-model-tools-music-perl libgenome-perl libgff libgkarrays libgo-perl libgtextutils libgzstream libhac-java libhat-trie libhmsbeagle libhpptools libics libjbzip2-java libjloda-java libjung-free-java libkmlframework-java liblemon libmems libmialm libminc libmuscle libncl liboptions-java libpal-java libpll libpsortb libqes libquazip librandom123 librcsb-core-wrapper librdp-taxonomy-tree-java librg-blast-parser-perl librg-exception-perl librg-utils-perl librostlab-blast libsis-base-java libsmithwaterman libsort-key-top-perl libtabixpp libtecla libtfbs-perl libthread-pool libvistaio libxdf libzeep libzerg libzerg-perl libzstd loki ltrsift lucy macs maffilter mafft mapdamage maq maqview mash maude mauve-aligner maxflow mcl medicalterms melting mencal metaphlan2-data metastudent metastudent-data-2 mia mialmpick miaviewit microbegps milib minc-tools minia miniasm minimap mipe mlv-smile mobyle mobyle-programs mobyle-tutorials mothur mptp mrbayes mriconvert mrs murasaki muscle mustang mypy nanook ncbi-seg ncbi-tools6 neobio njplot norsnet norsp nutsqlite odil opencfu openslide openslide-python opensurgsim orthanc orthanc-dicomweb orthanc-imagej orthanc-mysql orthanc-postgresql orthanc-webviewer orthanc-wsi pal2nal paml papyrus paraclu parafly parsinsert parsnp patman pbalign pbbam pbbarcode pbcopper pbdagcon pbh5tools pbseqlib pbsim pbsuite pcalendar pdb2pqr perlprimer perm phast phipack phybin phylip phyml physamp phyutility phyx piler pirs pixelmed-codec placnet plasmidomics plasmidseeker plink plip poa pondus populations porechop poretools pp-popularity-contest praat prank predictnls predictprotein prime-phylo primer3 proalign probabel probalign probcons proda prodigal profbval profisis profnet profphd profphd-utils proftmb progressivemauve proteinortho prottest pscan-chip pscan-tfbs pvrg-jpeg pycorrfit pymia pynast pyqi pyscanfcs python3-typed-ast python-avro python-biom-format python-biotools python-burrito python-bx python-bz2file python-clips python-cobra python-cogent python-colormap python-colormath python-csb python-cutadapt python-dendropy python-depinfo python-easydev python-fitbit python-freecontact python-gffutils python-hdmedians python-hl7 python-intervaltree-bio python-lzstring python-matplotlib-venn python-mne python-multipletau python-mypy-extensions python-pbcommand python-pbcore python-pipdeptree python-pybedtools python-pyfaidx python-pyflow python-pymummer python-pysam python-pyvcf python-qcli python-rdflib-jsonld python-ruffus python-schema-salad python-screed python-spectra python-sqlsoup python-sqt python-treetime python-xopen qrisk2 qsopt-ex quorum radiant rambo-k rampler rapmap rate4site ray rdp-alignment rdp-classifier rdp-readseq readseq reapr repeatmasker-recon reprof rnahybrid rna-star roary roguenarok rsem rtax ruby-rgfa runcircos-gui saint salmid samblaster samtools samtools-legacy sbmltoolbox scoary scrm scythe seaview seer segemehl seqan seqmagick seqprep seqtk seqtools sga sibsim4 sickle sigma-align sim4 smalr smalt snakemake snap snap-aligner sniffles snpomatic snp-sites soapsnp socket++ sofa-framework spaced spdlog sphinxcontrib-autoprogram sprai spread-phy squizz srf ssake sspace stacks staden staden-io-lib subread suitename sumaclust sumatra sweed swissknife tantan t-coffee theseus tifffile tigr-glimmer tm-align tophat toppred trace2dbest tracetuner transdecoder transrate-tools transtermhp tree-puzzle treeviewx trimmomatic tvc uc-echo unanimity varna vcftools velvet velvetoptimiser volpack vtk-dicom wise xmedcon yaggo yaha zalign

A package name displayed with a bold font is an indication that this package has a note. Visited packages are linked in green, those which have not been visited are linked in blue.
A # sign after the name of a package indicates that a bug is filed against it. Likewise, a + sign indicates there is a patch available, a P means a pending bug while # indicates a closed bug. In cases of several bugs, the symbol is repeated.