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maint_debian-med package set for buster/amd64

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package set maint_debian-med in buster/amd64
The package set maint_debian-med in buster/amd64 consists of:
None 29 (4.7%) packages failed to build reproducibly: microbiomeutil dicom3tools mira librostlab librostlab-blast metastudent-data fis-gtm ncbi-blast+ raster3d macsyfinder emboss jellyfish flexbar centrifuge seqan2 treeview gbrowse# grabix libhpptools fastx-toolkit logol sleepyhead mapsembler2 camitk bowtie2 mummer gdcm python-biopython libzstd
None 25 (4.1%) packages failed to build from source: gemma htseq bowtie theseus libseqlib psortb libsis-base-java libfastahack librcsb-core-wrapper staden-io-lib python-skbio libbpp-popgen libbpp-seq-omics libbpp-seq libbpp-qt picard-tools libbpp-phyl-omics htsjdk sra-sdk libbpp-phyl libbpp-core jmodeltest freebayes spades python-cobra
None None None None 3 (0.5%) packages are either in depwait state, blacklisted, not for us, or cannot be downloaded: bioperl-run pbbarcode libjloda-java
None 555 (90.7%) packages successfully build reproducibly: abacas abyss acedb adapterremoval adun.app aegean aeskulap aevol aghermann alien-hunter alter-sequence-alignment altree amap-align amide ampliconnoise andi anfo aragorn arden ariba artemis# artfastqgenerator art-nextgen-simulation-tools assemblytics augustus autodocksuite autodock-vina axe-demultiplexer baitfisher# bali-phy bambamc bamtools barrnap bart bart-view bcftools### beads beagle beast-mcmc bedops bedtools# berkeley-express biococoa bio-eagle biojava4-live biojava-live biomaj3 biomaj3-cli biomaj3-core biomaj3-daemon biomaj3-download biomaj3-process biomaj3-user biomaj3-zipkin bioperl biosquid biosyntax bio-tradis bitseq bolt-lmm boxshade bppphyview bppsuite brig bwa cain camp canu cassiopee cdbfasta cd-hit cfflib cgview charls chromhmm chromimpute ciftilib circlator circos circos-tools clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx codonw coils concavity consensuscore conservation-code crac ctdconverter ctdopts ctn ctsim cwltool cycle daligner dascrubber dawg dazzdb dcm2niix dcmtk debian-med deepnano delly dialign-t diamond-aligner dicompyler dicomscope dindel discosnp disulfinder dnaclust dssp dwgsim ea-utils ecopcr edfbrowser edflib edtsurf eigensoft elastix embassy-domainatrix embassy-domalign embassy-domsearch emboss-explorer e-mem epcr examl exonerate fast5 fastaq fastdnaml fastlink fastml fastqc fastqtl fasttree fermi-lite ffindex figtree fitgcp freecontact freemedforms-project fsa fsm-lite fw4spl g2 galileo garli gasic gdpc genometester genometools gentle getdata gfapy gff2aplot gff2ps giira ginkgocadx glam2 gnumed-client gnumed-server golang-github-dataence-porter2 graphlan grinder gubbins gwama gwyddion harvest-tools hhsuite hilive hinge hisat2 hmmer hmmer2 htslib## hunspell-en-med hyphy idba igraph imagej imagevis3d indelible infernal insighttoolkit4 ipig iqtree ismrmrd# iva jaligner jam-lib jebl2 jellyfish1 jheatchart kalign khmer kineticstools king king-probe kissplice kmc kmer kraken lamarc lambda-align last-align lefse libace-perl libbio-coordinate-perl libbiod libbio-das-lite-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbioparser-dev libbpp-raa libcereal libchado-perl libcolt-free-java libctapimkt libdisorder libdivsufsort libfreecontact-perl libgenome libgenome-model-tools-music-perl libgenome-perl libgff libgkarrays libgo-perl libgtextutils libgzstream libhac-java libhat-trie libhmsbeagle libics libjbzip2-java libjung-free-java libkmlframework-java liblemon libmems libmialm libminc libmuscle libncl liboptions-java libpal-java libpll libpsortb libqes libquazip librandom123 librdp-taxonomy-tree-java librg-blast-parser-perl librg-exception-perl librg-utils-perl libsmithwaterman libsort-key-top-perl libssw libtabixpp libtfbs-perl libthread-pool libundead libvcflib libzeep libzerg libzerg-perl loki ltrsift macs maffilter mafft mapdamage maq maqview mash maude maxflow mcl medicalterms melting mencal metaphlan2 metaphlan2-data metastudent metastudent-data-2 mhap mia mialmpick miaviewit microbegps minc-tools minia minimap mipe mlv-smile mobyle mobyle-programs mobyle-tutorials mothur mptp mrbayes mriconvert mrs murasaki muscle mustang mypy nanook nanopolish ncbi-entrez-direct ncbi-seg ncbi-tools6 ncbi-vdb neobio ngs-sdk# njplot norsnet norsp odil opencfu openslide openslide-python orthanc orthanc-dicomweb orthanc-imagej orthanc-postgresql orthanc-webviewer orthanc-wsi pal2nal paleomix paml papyrus paraclu parafly parsinsert parsnp patman pbbam# pbsim pcalendar pdb2pqr perlprimer perm pftools phast phipack phybin phylip phyml physamp phyutility piler pilon pirs pixelmed-codec plasmidomics plast plastimatch plink plink1.9 plip poa pondus populations poretools pp-popularity-contest praat prank predictnls predictprotein prime-phylo primer3 proalign probabel probalign probcons proda prodigal profbval profisis profnet profphd profphd-utils proftmb progressivemauve proteinortho prottest pscan-tfbs pvrg-jpeg pycorrfit pymia pynast pyqi pyscanfcs python3-typed-ast python-avro python-bd2k python-biom-format python-biotools python-burrito python-bx python-bz2file python-clips python-cogent python-colormap python-colormath python-csb python-cutadapt python-dendropy python-dictobj python-easydev python-fitbit python-freecontact python-hl7 python-intervaltree-bio python-lzstring python-matplotlib-venn python-multipletau python-pbcommand python-pbcore python-pyfaidx python-pyflow python-pymummer python-pysam python-pyvcf python-qcli python-rdflib-jsonld python-ruffus python-schema-salad python-screed python-spectra python-sqlsoup python-treetime python-xopen qcumber qrisk2 qsopt-ex qtltools quorum radiant rambo-k rampler rapmap rate4site raxml ray r-cran-ape r-cran-evd r-cran-r.oo r-cran-waveslim r-cran-wavethresh r-cran-webutils rdp-alignment rdp-classifier rdp-readseq readseq reapr relion repeatmasker-recon reprof rnahybrid roary roguenarok r-other-hms-dbmi-spp rsem rtax ruby-rgfa runcircos-gui salmon sambamba samtools samtools-legacy scrm scythe seaview seer seqan seqmagick seqprep seqsero seqtk seqtools sga sibsim4 sickle sigma-align sim4 simpleitk smalr smalt snakemake snap snap-aligner# sniffles snpomatic snp-sites soapdenovo soapdenovo2 soapsnp socket++ sofa-framework sortmerna spaced spdlog sphinxcontrib-autoprogram sprai spread-phy squizz srf srst2 ssake sspace stacks staden subread suitename sumaclust sumatra surankco swarm-cluster sweed swissknife tantan t-coffee tifffile tigr-glimmer tm-align tnseq-transit tophat toppred trace2dbest transdecoder transrate-tools transtermhp tree-puzzle treeviewx trimmomatic uc-echo varna vcftools velvet velvetoptimiser volpack vsearch vtk-dicom wise xmedcon yaggo yaha zalign

A package name displayed with a bold font is an indication that this package has a note. Visited packages are linked in green, those which have not been visited are linked in blue.
A # sign after the name of a package indicates that a bug is filed against it. Likewise, a + sign indicates there is a patch available, a P means a pending bug while # indicates a closed bug. In cases of several bugs, the symbol is repeated.