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maint_debian-med package set for bookworm/arm64

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package set maint_debian-med in bookworm/arm64
The package set maint_debian-med in bookworm/arm64 consists of 902 packages:
None 30 (3.3%) packages failed to build reproducibly: mapsembler2 parallel htslib bali-phy ncbi-blast+ python-cogent mrtrix3 ball macs python-anndata libzeep mira nipype emboss cif-tools hhsuite gbrowse salmon centrifuge metastudent-data gatb-core mia kissplice gdcm dicom3tools librostlab snakemake# libsbml treeview nipy
None 18 (2.0%) packages failed to build from source: python-stubserver mypy python-streamz acedb illustrate spades pychopper vg canu bedops python-easydev rapmap epigrass orthanc-wsi pydicom eegdev opensurgsim nitime
None None None None 49 (5.4%) packages are either in depwait state, blacklisted, not for us, or cannot be downloaded: prokka megahit fis-gtm ncbi-vdb sra-sdk xenium macsyfinder bolt-lmm hmmer soapdenovo2 metabat libstatgen iqtree sortmerna artemis bio-eagle soapaligner mecat2 soapdenovo lambda-align2 consensuscore circlator obitools elastix infernal smrtanalysis libmmmulti sight camitk nifti2dicom minimac4 unicycler psortb seqsero ginkgocadx plastimatch gubbins sepp barrnap parallel-fastq-dump skesa q2-dada2 plasmidid shovill libatomic-queue pftools relion insighttoolkit4 bmtk
None 805 (89.2%) packages successfully build reproducibly: abacas abyss adapterremoval adun.app aegean aeskulap aevol aghermann alien-hunter allelecount alter-sequence-alignment altree amap-align amide ampliconnoise andi anfo aragorn arcp arden argh ariba artfastqgenerator art-nextgen-simulation-tools assembly-stats assemblytics ataqv atropos augur augustus autodocksuite autodock-vina axe-demultiplexer baitfisher bambamc bamtools bandage bart bart-view bbhash bbmap bcalm bcftools### beads beagle beast2-mcmc beast-mcmc bedtools berkeley-express bioawk biobambam2 biococoa biojava4-live biojava-live biomaj3 biomaj3-cli biomaj3-core biomaj3-daemon biomaj3-download biomaj3-process biomaj3-user biomaj3-zipkin bioperl bioperl-run bio-rainbow biosig biosquid biosyntax bio-tradis bio-vcf bitseq blasr bowtie bowtie2 boxshade bppphyview bppsuite brian brig bustools bwa capsule-maven-nextflow capsule-nextflow cassiopee cat-bat cct cdbfasta cgview charls chip-seq chromhmm chromimpute ciftilib circos circos-tools civetweb clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx cnvkit codonw coils concavity concurrentqueue conservation-code covtobed crac ctdconverter ctdopts ctn ctsim cwlformat cwltool daligner damapper dascrubber dawg dazzdb dcm2niix dcmtk debian-med deepnano delly density-fitness dextractor dialign dialign-t diamond-aligner dicomnifti dicomscope dipy discosnp dnaclust dnapi drop-seq dssp dwgsim ea-utils ecopcr edfbrowser edflib edtsurf eigensoft elph embassy-domainatrix embassy-domalign embassy-domsearch emboss-explorer emmax enlighten epcr examl exonerate fast5 fasta3 fastani fastaq fastdnaml fastlink fastml fastp fastqc fastqtl fasttree fermi-lite ffindex figtree filtlong fitgcp flash flexbar freebayes freecontact fsa fsm-lite g2 galileo garli gasic gdpc gemma genometester genomethreader genometools gentle getdata gfapy gff2aplot gff2ps gffread ggd-utils ghmm gifticlib gjh-asl-json glam2 gmap gnumed-client gnumed-server golang-github-dataence-porter2 grabix graphlan grinder gsort gwama gwyddion h5sparse harvest-tools hilive hinge hisat2 hmmer2 hnswlib htscodecs htseq htsjdk hts-nim-tools hunspell-en-med hyphy icb-utils idba idseq-bench igdiscover igor igraph iitii imagej indelible indexed-gzip insilicoseq intake invesalius ipig ismrmrd# iva ivar jaligner jam-lib jebl2 jellyfish jellyfish1 jheatchart jmodeltest kalign kallisto kaptive khmer kineticstools king king-probe kleborate kma kmer kmerresistance kraken lagan lamarc lambda-align lastz lefse libace-perl libamplsolver libargs libatomicbitvector libbigwig libbio-alignio-stockholm-perl libbio-cluster-perl libbio-coordinate-perl libbiod libbio-das-lite-perl libbio-db-biofetch-perl libbio-db-embl-perl libbio-db-hts-perl libbio-db-ncbihelper-perl libbio-featureio-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbioparser-dev libbio-tools-run-remoteblast-perl libbio-variation-perl libbpp-core libbpp-phyl libbpp-phyl-omics libbpp-popgen libbpp-qt libbpp-raa libbpp-seq libbpp-seq-omics libcereal libchado-perl libcifpp libcolt-free-java libctapimkt libdeflate libdisorder libdistlib-java libdivsufsort libedlib libfastahack libflathashmap libfreecontact-perl libgclib libgenome libgenome-model-tools-music-perl libgenome-perl libgff libgkarrays libgo-perl libgtextutils libgzstream libhac-java libhat-trie libhmsbeagle libhpptools libics libips4o libjloda-java libjung-free-java libkmlframework-java libla4j-java liblemon libmaus2 libmems libmialm libminc libmmap-allocator libmuscle libncl libnewuoa liboptions-java libpal-java libpdb-redo libpj-java libpll libpsortb libqes libquazip librandom123 librcsb-core-wrapper librdp-taxonomy-tree-java librg-blast-parser-perl librg-exception-perl librg-utils-perl librostlab-blast libsecrecy libseqlib libsis-base-java libsis-jhdf5-java libsmithwaterman libsort-key-top-perl libssw libstreamvbyte libtabixpp libtecla libtfbs-perl libthread-pool libvbz-hdf-plugin libvcflib libvistaio libxdf libzerg libzerg-perl libzstd lighter loki ltrsift lucy lumpy-sv maffilter mafft mapdamage maq maqview mash maude mauve-aligner mcl medicalterms melting mencal metaphlan2 metaphlan2-data metastudent metastudent-data-2 mhap mialmpick miaviewit microbegps microbiomeutil milib minc-tools mindthegap minia miniasm minimap minimap2 mipe mirtop mlv-smile mmseqs2 mosdepth mothur mptp mrbayes mrc mriconvert mricron multiqc mummer muscle mustang nanofilt nanolyse nanook nanopolish nanostat nanosv ncbi-entrez-direct ncbi-seg ncbi-tools6 neo neobio ngmlr ngs-sdk nibabel nifticlib nim-hts nim-kexpr nim-lapper njplot norsnet norsp ntcard nthash nutsqlite nxtrim odil odin ont-fast5-api opencfu openslide openslide-python optimir orthanc orthanc-dicomweb orthanc-gdcm orthanc-imagej orthanc-mysql orthanc-postgresql orthanc-python orthanc-webviewer oscar pairtools pal2nal paleomix paml papyrus paraclu parafly parasail parsinsert paryfor patman patsy pbbam pbcopper pbdagcon pbseqlib pbsim pbsuite pcalendar pdb2pqr peptidebuilder perlprimer perm phast phipack phybin phylip phyml physamp phyutility phyx picard-tools picopore pigx-rnaseq piler pique pirs pixelmed pixelmed-codec pizzly placnet plasmidomics plasmidseeker plast plink plip poa populations porechop poretools pplacer pp-popularity-contest praat prank predictnls presto prime-phylo primer3 prinseq-lite proalign probabel probalign probcons proda prodigal profbval profisis profnet profphd-utils proftmb progressivemauve proteinortho prottest pscan-chip pscan-tfbs psignifit psychopy pvrg-jpeg pybel pybigwig pycoqc pycorrfit pyensembl pymia pynn pyode pyqi pyranges pyrle pyscanfcs pysurfer python-alignlib python-avro python-bcbio-gff python-bel-resources python-bids-validator python-biom-format python-biopython python-biotools python-bx python-bz2file python-cgecore python-cigar python-ciso8601 python-cobra python-colormap python-colormath python-csb python-cutadapt python-datacache python-deeptools python-deeptoolsintervals python-dendropy python-depinfo python-dicompylercore python-dnaio python-epimodels python-ete3 python-etelemetry python-fitbit python-freecontact python-geneimpacts python-gffutils python-gtfparse python-hdmedians python-hl7 python-intervaltree-bio python-leidenalg python-loompy python-lzstring python-matplotlib-venn python-mne python-multipletau python-multisplitby python-nanoget python-ncls python-pairix+ python-parasail python-pbcommand python-pbcore python-pipdeptree python-py2bit python-pyani python-pybedtools+ python-pycosat python-pyfaidx python-pyflow python-pymummer python-pynndescent python-pypubsub python-pysam python-pyspoa python-pyvcf python-questplus python-rdflib-jsonld python-ruffus python-scitrack python-screed python-sinfo python-skbio python-spectra python-sqlsoup python-sqt python-stdlib-list python-tinyalign python-treetime python-typechecks python-upsetplot python-wdlparse python-wordcloud python-xopen pyxid pyxnat q2-alignment q2cli q2-cutadapt q2-demux q2-feature-classifier q2-feature-table q2-metadata q2-quality-control q2-quality-filter q2-taxa q2templates q2-types qcat qcumber qiime qrisk2 qsopt-ex qtltools quicktree quitcount quorum racon ragout rambo-k rampler raster3d rate4site raxml ray rdp-alignment rdp-classifier rdp-readseq readerwriterqueue readseq readucks reapr recan relacy repeatmasker-recon reprof resfinder resfinder-db rnahybrid rna-star roary roguenarok routine-update rsem rtax ruby-rgfa runcircos-gui saint salmid sambamba samblaster samclip samtools samtools-legacy sbmltoolbox scoary scrappie scrm scythe seaview seer segemehl seqan2 seqan3 seqkit seqmagick seqprep seqtk seqtools seriation sga shapeit4 shasta sibelia sibsim4 sickle sigma-align sigviewer sim4 simde simka simrisc skewer smalt smart-open snap snap-aligner sniffles snpomatic snp-sites soapsnp socket++ sorted-nearest spaln spdlog sphinxcontrib-autoprogram spoa sprai spread-phy squizz srf srst2 ssake sspace stacks staden staden-io-lib stringtie subread suitename sumaclust sumalibs sumatra surankco survivor swarm-cluster sweed swissknife tantan tao-config tao-json t-coffee theseus thesias tigr-glimmer tm-align tnseq-transit toil tombo tophat-recondition toppred tortoize trace2dbest tracetuner transdecoder transrate-tools transtermhp tree-puzzle treeviewx trf trim-galore trimmomatic trinculo trinityrnaseq tvc uc-echo umap-learn umis uncalled unifrac unikmer varna vcfanno vcftools velvet velvetoptimiser virulencefinder vmatch volpack vsearch vt vtk-dicom wham-align wise wtdbg2 xdffileio xmedcon xpore yaggo yanagiba yanosim zalign

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