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maint_debian-med package set for bullseye/amd64

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package set maint_debian-med in bullseye/amd64
The package set maint_debian-med in bullseye/amd64 consists of 718 packages:
None 33 (4.6%) packages failed to build reproducibly: sra-sdk bali-phy libbiod loki raster3d gbrowse htslib## mira librostlab flexbar insighttoolkit4 logol mapsembler2 dicom3tools sambamba seqan2 python-cogent jmodeltest fis-gtm libzeep macs centrifuge ball vg metastudent-data nitime pydicom minia kissplice treeview crac mummer ncbi-blast+
None 17 (2.4%) packages failed to build from source: seqmagick libsmithwaterman conda-package-handling libfastahack libgenome libncl libbpp-popgen libbpp-seq-omics libbpp-seq libbpp-qt libbpp-raa gatb-core figtree libbpp-core libbpp-phyl python-schema-salad libquazip
None None None None 1 (0.1%) packages are either in depwait state, blacklisted, not for us, or cannot be downloaded: seqan
None 667 (92.9%) packages successfully build reproducibly: abacas acedb adapterremoval adun.app aegean aeskulap aghermann alien-hunter allelecount alter-sequence-alignment altree ampliconnoise andi anfo aragorn arcp arden ariba artemis artfastqgenerator art-nextgen-simulation-tools assembly-stats assemblytics ataqv atropos augur augustus autodocksuite axe-demultiplexer baitfisher bambamc bamkit bamtools bandage barrnap bart bart-view bbhash bbmap bcalm bcftools### beast2-mcmc beast-mcmc bedops bedtools berkeley-express bio-eagle biomaj3 biomaj3-cli biomaj3-daemon biomaj3-process biomaj3-user biomaj3-zipkin bioperl bio-rainbow biosig4c++ biosquid biosyntax bitseq bolt-lmm bowtie boxshade bppphyview bppsuite brig busco bustools bwa camitk camp canu cat-bat cct cdbfasta cd-hit cgview changeo charls chip-seq chromhmm chromimpute ciftilib circlator circos-tools clearcut clonalframe clonalframeml clonalorigin clustalo clustalw clustalx cnvkit codonw coils concavity consensuscore conservation-code covtobed ctdconverter ctdopts ctn cwltool cyvcf2 daligner dascrubber dawg dazzdb dcmtk deepnano delly dextractor dialign dialign-t diamond-aligner dicompyler dicomscope dindel discosnp dnaclust dnapi drop-seq dssp dwgsim ea-utils edflib edtsurf eigensoft elastix embassy-domainatrix embassy-domalign embassy-domsearch e-mem emmax enlighten epcr epigrass estscan exonerate fast5 fasta3 fastaq fastdnaml fastlink fastml fastp fastqc fastqtl fasttree fermi-lite ffindex filtlong fitgcp flash freecontact fsa fsm-lite g2 galileo garli gasic gdpc genometester genomethreader genometools gentle getdata gfapy gff2aplot gff2ps gffread ginkgocadx glam2 gmap# gnumed-client gnumed-server golang-github-dataence-porter2 grabix graphlan grinder gubbins gwama gwyddion harvest-tools hdmf hhsuite hilive hinge hisat2 hmmer2 hopscotch-map htscodecs htseq htsjdk hunspell-en-med idba igdiscover igor igraph imagej indelible infernal intake invesalius ipig iqtree ismrmrd# iva ivar jaligner jam-lib jebl2 jellyfish jellyfish1 jheatchart kalign kallisto kaptive khmer kineticstools king king-probe kleborate kma kmer kmerresistance kraken2 lagan lamarc lambda-align lambda-align2 last-align lastz lefse libace-perl libatomicbitvector libbigwig libbio-alignio-stockholm-perl libbio-cluster-perl libbio-coordinate-perl libbio-das-lite-perl libbio-db-hts-perl libbio-featureio-perl libbio-graphics-perl libbio-mage-perl libbio-mage-utils-perl libbioparser-dev libbio-tools-run-remoteblast-perl libbpp-phyl-omics libcereal libchado-perl libcolt-free-java libctapimkt libdeflate libdistlib-java libdivsufsort libedlib libfreecontact-perl libgclib libgenome-model-tools-music-perl libgenome-perl libgff libgkarrays libgo-perl libgzstream libhac-java libhat-trie libhmsbeagle libhpptools libics libips4o libjbzip2-java libjloda-java libjung-free-java libkmlframework-java libla4j-java liblemon libmaus2 libmems libmialm libminc libmmap-allocator libmurmurhash libmuscle liboptions-java libpal-java libpll libpsortb libqes librandom123 librcsb-core-wrapper librdp-taxonomy-tree-java librg-blast-parser-perl librg-exception-perl librg-utils-perl libseqlib libsis-base-java libsort-key-top-perl libssw libstatgen libtabixpp libtecla libtfbs-perl libthread-pool libundead libvcflib libvistaio libxdf libzerg libzerg-perl lighter ltrsift lucy maffilter mafft mapdamage maq maqview mash maude mauve-aligner mcl medicalterms melting mencal metabat metaphlan2 metaphlan2-data metastudent-data-2 mhap miaviewit microbegps milib minc-tools mindthegap miniasm minimac4 minimap minimap2 mipe mirtop mlv-smile mmseqs2 mothur mptp mrbayes# mriconvert mrs multiqc murasaki muscle mustang nanofilt nanook nanopolish nanosv ncbi-acc-download ncbi-entrez-direct ncbi-seg neobio ngmlr ngs-sdk nibabel njplot nutsqlite odil openslide opensurgsim orthanc orthanc-dicomweb orthanc-imagej orthanc-postgresql orthanc-python orthanc-webviewer orthanc-wsi oscar pairtools pal2nal paml papyrus paraclu parasail parsinsert parsnp paryfor patsy pbcopper pbsim pcalendar pdb2pqr perlprimer perm pftools phast phipack phybin phylip phyml physamp phyutility phyx picard-tools piler pilercr pilon pirs pixelmed pixelmed-codec placnet plasmidomics plasmidseeker plast plastimatch plink plink1.9 plink2 plip poa populations porechop pplacer pp-popularity-contest praat prank predictnls presto prime-phylo primer3 prinseq-lite proalign probabel probalign proda prodigal profphd-utils proftmb progressivemauve proteinortho prottest pscan-chip pscan-tfbs psortb psychopy pvrg-jpeg pybel pybigwig pychopper pycoqc pymia pyqi pyrle pyscanfcs python3-typed-ast python-avro python-bcbio-gff python-bel-resources python-bids-validator python-biom-format python-biopython python-biotools python-bx python-bz2file python-cgecore python-ciso8601 python-cobra python-colormap python-colormath python-csb python-cutadapt python-deeptools python-deeptoolsintervals python-dendropy python-depinfo python-dicompylercore python-dnaio python-easydev python-ete3 python-etelemetry python-fitbit python-freecontact python-geneimpacts python-gffutils python-hl7 python-lzstring python-matplotlib-venn python-multipletau python-multisplitby python-mypy-extensions python-nanoget python-nanomath python-ncls python-parasail python-pauvre# python-pbcommand python-pbcore python-pipdeptree python-py2bit python-pybedtools python-pycosat python-pyfaidx python-pyflow python-pymummer python-pypubsub python-pysam python-pyvcf python-questplus python-rdflib-jsonld python-ruffus python-scitrack python-screed python-skbio python-spectra python-sqlsoup python-sqt python-streamz python-tinyalign python-treetime python-wordcloud python-xopen pyxid pyxnat q2templates qcat qcumber qrisk2 qsopt-ex qtltools+ quicktree quorum racon radiant ragout rambo-k rampler rapmap rate4site raxml ray rdp-alignment rdp-classifier rdp-readseq readerwriterqueue readseq readucks reapr recan repeatmasker-recon reprof resfinder resfinder-db rnahybrid rna-star roary roguenarok routine-update rsem rtax ruby-rgfa runcircos-gui salmid salmon samblaster samclip samtools samtools-legacy sbmltoolbox scoary scrm scythe seaview segemehl seirsplus seqan3 seqprep seqsero seqtk seqtools sga shapeit4 sibsim4 sickle sight sigma-align sim4 simde skewer smalt smart-open snakemake# snap snap-aligner sniffles snpomatic snp-sites soapaligner soapdenovo soapdenovo2 soapsnp socket++ sorted-nearest spaced spades spaln spdlog sphinxcontrib-autoprogram spoa sprai spread-phy squizz srf srst2 ssake sspace stacks staden staden-io-lib stringtie subread suitename sumaclust sumalibs sumatra surankco swarm-cluster sweed swissknife tantan tao-config tao-json t-coffee theseus thesias tiddit tigr-glimmer tm-align tnseq-transit toil tophat-recondition toppred trace2dbest transdecoder transrate-tools transtermhp treeviewx trim-galore trimmomatic trinculo trinityrnaseq tvc uc-echo umap-learn umis vcftools velvet velvetoptimiser virulencefinder vmatch volpack vsearch vt vtk-dicom wise wtdbg2 xmedcon yaggo yaha yanagiba zalign

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A # sign after the name of a package indicates that a bug is filed against it. Likewise, a + sign indicates there is a patch available, a P means a pending bug while # indicates a closed bug. In cases of several bugs, the symbol is repeated.