Fri Nov 22 23:24:06 UTC 2024 I: starting to build python-pdbfixer/unstable/i386 on jenkins on '2024-11-22 23:23' Fri Nov 22 23:24:06 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_19/31369/console.log Fri Nov 22 23:24:06 UTC 2024 I: Downloading source for unstable/python-pdbfixer=1.9-4 --2024-11-22 23:24:06-- http://deb.debian.org/debian/pool/main/p/python-pdbfixer/python-pdbfixer_1.9-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2196 (2.1K) [text/prs.lines.tag] Saving to: ‘python-pdbfixer_1.9-4.dsc’ 0K .. 100% 246M=0s 2024-11-22 23:24:06 (246 MB/s) - ‘python-pdbfixer_1.9-4.dsc’ saved [2196/2196] Fri Nov 22 23:24:06 UTC 2024 I: python-pdbfixer_1.9-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-pdbfixer Binary: python3-pdbfixer Architecture: all Version: 1.9-4 Maintainer: Debian Python Team Uploaders: Andrius Merkys , Homepage: https://github.com/openmm/pdbfixer Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/python-team/packages/python-pdbfixer Vcs-Git: https://salsa.debian.org/python-team/packages/python-pdbfixer.git Testsuite: autopkgtest Testsuite-Triggers: python3-pytest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, python3, python3-legacy-cgi, python3-openmm, python3-pytest , python3-setuptools, rename Package-List: python3-pdbfixer deb python optional arch=all Checksums-Sha1: 4c91ec5a75bb631f5f90db425c4f609aa61eb75e 648085 python-pdbfixer_1.9.orig.tar.gz bce855d281e398255ae822da6efefdb1a9d6375c 3032 python-pdbfixer_1.9-4.debian.tar.xz Checksums-Sha256: 88b9a77e50655f89d0eb2075093773e82c27a4cef842cb7d735c877b20cd39fb 648085 python-pdbfixer_1.9.orig.tar.gz 20e34a602494ab4b53d05330df4c3d8970fd5d4656492397f5711ef6f17ebd8a 3032 python-pdbfixer_1.9-4.debian.tar.xz Files: 48fc0c9c12eda19e786acbc9e62433f5 648085 python-pdbfixer_1.9.orig.tar.gz afcd8687f2c8a3c429f9bc025cfdf752 3032 python-pdbfixer_1.9-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmc4pUkRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBqb8A//QrBirRhPMEhSFlqTii5kcGi/PPXdVdeX qw/s0vjqmwEcqi6TNSZN1szl+OqN2wgBWGdsa2n8t0uVK7FMjAyvZTlCrF23Bg1W 4oqSivwDhAiEtPD/jwGqjx3RVmXjV/NNpTCElyu9zUgtc00HNww5jI2tl1BKTG3Y 7p51Id7b6eNHJ9/zfz/5GloIq6zMa9wtu/51Do9NqFeUMcanU5DwSbNFyWlZmd+H bxRgoTbQR9XvjMuOKhXtsoE4n3KXTHyr8eoX9J0X0LoEZPbQ6RVBqQI98AmV3qiK Y7hc0C5lqD+lN9NIgLdAyRDlux7U6eQ3dZ9MX46wwoY4Ni3fdSsI2s1os4i3MZl0 PrOLDx7bFqnhF5YNzGpsyLHPgCYtq0sogGSCuxJGb1+lKkPmTnsYj5nwI2Yz7qCK Urwr1dzTmmd/e9aUTCz+jg2XOSJb+Bhd1Y0F3Px4Wp7GLZyP4kQOXztneWm3t8Wf c7ie/am6xqJaveFwf0nS8TEyxcItMqejL1i6O47fPf/pQk4ruS0DspqQ2PE7oA6+ PcT8MyzzOxJwGNx56FHzGEcj0aeHmhNUqO1XiTL7RYrWXlAYpQA+3uP6Q3EIAdx6 s7A9F9TtGyMYHMcOMv67V4zQhrwGtinylUTZpkxQm59kn6QazzzKw5ebqOHKenq3 wfW8aPIz5nA= =2tt0 -----END PGP SIGNATURE----- Fri Nov 22 23:24:06 UTC 2024 I: Checking whether the package is not for us Fri Nov 22 23:24:06 UTC 2024 I: Starting 1st build on remote node infom07-i386.debian.net. Fri Nov 22 23:24:06 UTC 2024 I: Preparing to do remote build '1' on infom07-i386.debian.net. Fri Nov 22 23:24:24 UTC 2024 I: Deleting $TMPDIR on infom07-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Nov 22 11:24:08 -12 2024 I: pbuilder-time-stamp: 1732317848 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-pdbfixer_1.9-4.dsc] I: copying [./python-pdbfixer_1.9.orig.tar.gz] I: copying [./python-pdbfixer_1.9-4.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Nov 16 13:59:37 2024 gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A gpgv: issuer "tchet@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-pdbfixer_1.9-4.dsc: no acceptable signature found dpkg-source: info: extracting python-pdbfixer in python-pdbfixer-1.9 dpkg-source: info: unpacking python-pdbfixer_1.9.orig.tar.gz dpkg-source: info: unpacking python-pdbfixer_1.9-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/30280/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='944d009e753d449cabec9e6780d5c407' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='30280' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.mIlcrg7Y/pbuilderrc_wWcn --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.mIlcrg7Y/b1 --logfile b1/build.log python-pdbfixer_1.9-4.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom07-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/30280/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, python3, python3-legacy-cgi, python3-openmm, python3-pytest, python3-setuptools, rename dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19952 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-legacy-cgi; however: Package python3-legacy-cgi is not installed. pbuilder-satisfydepends-dummy depends on python3-openmm; however: Package python3-openmm is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on rename; however: Package rename is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-autocommand{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-legacy-cgi{a} python3-minimal{a} python3-more-itertools{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pytest{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} rename{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-pygments wget 0 packages upgraded, 71 newly installed, 0 to remove and 0 not upgraded. Need to get 29.2 MB of archives. After unpacking 113 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: python3-openmm which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-autocommand{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-legacy-cgi{a} python3-minimal{a} python3-more-itertools{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pytest{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} rename{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-pygments wget 0 packages upgraded, 71 newly installed, 0 to remove and 0 not upgraded. Need to get 29.2 MB of archives. After unpacking 113 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/30280 and its subdirectories Fri Nov 22 23:24:25 UTC 2024 W: No second build log, what happened? Fri Nov 22 23:24:25 UTC 2024 W: Downloading the build dependencies failed Fri Nov 22 23:24:25 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Fri Nov 22 23:24:25 UTC 2024 W: Network problems are automatically rescheduled after some hours.