Sat May 18 07:00:44 UTC 2024 I: starting to build gasic/unstable/i386 on jenkins on '2024-05-18 07:00' Sat May 18 07:00:44 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_20/1957/console.log Sat May 18 07:00:44 UTC 2024 I: Downloading source for unstable/gasic=0.0.r19-8 --2024-05-18 07:00:44-- http://deb.debian.org/debian/pool/main/g/gasic/gasic_0.0.r19-8.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2112 (2.1K) [text/prs.lines.tag] Saving to: ‘gasic_0.0.r19-8.dsc’ 0K .. 100% 276M=0s 2024-05-18 07:00:44 (276 MB/s) - ‘gasic_0.0.r19-8.dsc’ saved [2112/2112] Sat May 18 07:00:44 UTC 2024 I: gasic_0.0.r19-8.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: gasic Binary: gasic, gasic-examples Architecture: all Version: 0.0.r19-8 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Navid Fehrenbacher , Roland Fehrenbacher Homepage: http://sourceforge.net/projects/gasic/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/gasic Vcs-Git: https://salsa.debian.org/med-team/gasic.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-python, python3, bowtie2 Package-List: gasic deb science optional arch=all gasic-examples deb science optional arch=all Checksums-Sha1: 88354107099408f01e5bf58d98ceeffd847e63c0 12380 gasic_0.0.r19.orig.tar.xz 2f6a1244bb634fd49d01f52cfa1b291a86d2e8d5 7304572 gasic_0.0.r19-8.debian.tar.xz Checksums-Sha256: dcda434ace63719c7d3baca18c5da9adfe0e8a269b8dc6224306be9ddec9b8a9 12380 gasic_0.0.r19.orig.tar.xz 9a7a7ca939f2ae414f4d33780eea48970d510e11d7a487acb05e20ca9a7a5ec6 7304572 gasic_0.0.r19-8.debian.tar.xz Files: 9c24c950ab06a11b4de9a32bdb462669 12380 gasic_0.0.r19.orig.tar.xz e6ced514a072de9bce169370205f391a 7304572 gasic_0.0.r19-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmOt1cIRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHgLg/+PBXHWGYtyk2zCHEcaIaeZuRvxFD1ki7J Y1M271LwxnY77Y2JmUwjhu9mYJ8OeTkRtigqKzr4T4Pxi0YYIjn73jpIDnbosfvQ xcg8sAKGBd6z1rB925fWi51cNr64ieQMZd/yhOu74dKPuU5FxvgMfao+B+fan0Ek XPS0ph0rQs4VVZafwYspu6kc0Sd8H78hd07co3YMbzWsQ+eI060UvMMQlZBEBQ3v euJDmLL9hf61KbL+kKDjTE9TxVKR8uXRnM49+o1lybIiaydPRHmicVLXuXgxrDrE GWk049/5Tjd0VTM5a+WaHz1LUYxJWqrG7dGgWwS1cBHgjjl/0NkzcLrPWhncMtns yl6eN0SweSfPYN2HRyJkJ7T4VotLoM4Nnv0h9TPAaZ1f9ubnXmZuSsx4mlpyrsDt vhlRELcYhte66086D7RBfJHnf5LvGYz5i4n8bCdbanBNr/A7ggrN9cyx8b+1Zixy HhGriNYhG3kW7nPkxwnjdV3RE80R5puLW94yWsbPAT+anhw39K7HwtO8gnPwg2Zm wveQu7ijx9J0A5jkohUnMnPWIDNqkd+o5/GoBLhbhCIVFhnVJOVhyvUR96SA4C1k F2J/AiDwhJHBaLHYDVTeVPEFpwhbEzmGiJ+t2U4n16laWUrO+UTbH4SdMIlXCRwv SA0b4iO6oR4= =6Oig -----END PGP SIGNATURE----- Sat May 18 07:00:44 UTC 2024 I: Checking whether the package is not for us Sat May 18 07:00:44 UTC 2024 I: Starting 1st build on remote node infom08-i386.debian.net. Sat May 18 07:00:44 UTC 2024 I: Preparing to do remote build '1' on infom08-i386.debian.net. Sat May 18 07:00:58 UTC 2024 I: Deleting $TMPDIR on infom08-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jun 20 01:23:45 -12 2025 I: pbuilder-time-stamp: 1750425825 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [gasic_0.0.r19-8.dsc] I: copying [./gasic_0.0.r19.orig.tar.xz] I: copying [./gasic_0.0.r19-8.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Dec 29 18:00:34 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./gasic_0.0.r19-8.dsc: no acceptable signature found dpkg-source: info: extracting gasic in gasic-0.0.r19 dpkg-source: info: unpacking gasic_0.0.r19.orig.tar.xz dpkg-source: info: unpacking gasic_0.0.r19-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 2to3.patch dpkg-source: info: applying use_seqan_mason.patch dpkg-source: info: applying fix_example_indentation.patch dpkg-source: info: applying numpy_1.24.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/21842/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='3844aaa5cb244f6bad6c6e9596c81a35' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='21842' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.QGGvRbX2/pbuilderrc_R1gX --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.QGGvRbX2/b1 --logfile b1/build.log gasic_0.0.r19-8.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom08-i386 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 19 21:18 /bin -> usr/bin I: user script /srv/workspace/pbuilder/21842/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3, bowtie2 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on bowtie2; however: Package bowtie2 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdata-optlist-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libparams-util-perl{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8t64{a} libsub-exporter-perl{a} libsub-install-perl{a} libsub-override-perl{a} libsub-prototype-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 53 newly installed, 0 to remove and 0 not upgraded. Need to get 26.3 MB of archives. After unpacking 103 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: bowtie2 which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdata-optlist-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libparams-util-perl{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8t64{a} libsub-exporter-perl{a} libsub-install-perl{a} libsub-override-perl{a} libsub-prototype-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 53 newly installed, 0 to remove and 0 not upgraded. Need to get 26.3 MB of archives. After unpacking 103 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/21842 and its subdirectories Sat May 18 07:00:59 UTC 2024 W: No second build log, what happened? Sat May 18 07:00:59 UTC 2024 W: Downloading the build dependencies failed Sat May 18 07:00:59 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Sat May 18 07:00:59 UTC 2024 W: Network problems are automatically rescheduled after some hours.