Sun Oct 6 08:48:43 UTC 2024 I: starting to build r-bioc-scrnaseq/unstable/armhf on jenkins on '2024-10-06 08:48' Sun Oct 6 08:48:43 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_9/9336/console.log Sun Oct 6 08:48:43 UTC 2024 I: Downloading source for unstable/r-bioc-scrnaseq=2.18.0+ds-1 --2024-10-06 08:48:43-- http://deb.debian.org/debian/pool/main/r/r-bioc-scrnaseq/r-bioc-scrnaseq_2.18.0%2bds-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2708 (2.6K) [text/prs.lines.tag] Saving to: ‘r-bioc-scrnaseq_2.18.0+ds-1.dsc’ 0K .. 100% 327M=0s 2024-10-06 08:48:43 (327 MB/s) - ‘r-bioc-scrnaseq_2.18.0+ds-1.dsc’ saved [2708/2708] Sun Oct 6 08:48:43 UTC 2024 I: r-bioc-scrnaseq_2.18.0+ds-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: r-bioc-scrnaseq Binary: r-bioc-scrnaseq Architecture: all Version: 2.18.0+ds-1 Maintainer: Debian R Packages Maintainers Uploaders: Michael R. Crusoe Homepage: https://bioconductor.org/packages/scRNAseq/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-scrnaseq Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-scrnaseq.git Testsuite: autopkgtest-pkg-r Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-singlecellexperiment (>= 1.26.0), r-cran-matrix, r-bioc-biocgenerics (>= 0.50.0), r-bioc-s4vectors (>= 0.42.1), r-bioc-sparsearray (>= 1.4.8), r-bioc-delayedarray (>= 0.30.1), r-bioc-genomicranges (>= 1.56.1), r-bioc-summarizedexperiment (>= 1.34.0), r-bioc-experimenthub (>= 2.12.0), r-bioc-annotationhub (>= 3.12.0), r-bioc-annotationdbi (>= 1.66.0), r-bioc-ensembldb (>= 2.28.0), r-bioc-genomicfeatures (>= 1.56.0), r-bioc-alabaster.base (>= 1.4.2+ds-2~0exp3), r-bioc-alabaster.matrix, r-bioc-alabaster.sce, r-bioc-gypsum (>= 1.0.1+ds-2~0exp1), r-cran-jsonlite, r-cran-dbi, r-cran-rsqlite, r-bioc-hdf5array (>= 1.32.0-1~0exp2) Package-List: r-bioc-scrnaseq deb gnu-r optional arch=all Checksums-Sha1: 28327e6e06e79e12f8cf3c2c79c4087520e52608 57608 r-bioc-scrnaseq_2.18.0+ds.orig.tar.xz 3c7c29298b581308684a41bff3222891d69f9473 6612 r-bioc-scrnaseq_2.18.0+ds-1.debian.tar.xz Checksums-Sha256: 59b2b0b3e8511429a16597605e4c9f1de7e0d74bbc486baae100148f0d3b3b15 57608 r-bioc-scrnaseq_2.18.0+ds.orig.tar.xz 9dfd0d3b42e68f7f01de35a275d2c8b926411730ec5436a2aa0c2cb75c276533 6612 r-bioc-scrnaseq_2.18.0+ds-1.debian.tar.xz Files: b410c6b53e70bcc4f09fdf7b8c67cc6c 57608 r-bioc-scrnaseq_2.18.0+ds.orig.tar.xz 988a1c712fd5a4218980d1481d70a504 6612 r-bioc-scrnaseq_2.18.0+ds-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmbBz58ACgkQPCZ2P2xn 5uKjihAArfXne+sPCkiED6pBbnM3FgWID2DzOjsRGyiAIQPlpp7LIKyjBcsd4wyD 7yUXu97Pc9x2jPx87ZFARyERZfYxG2Na6JFfhkCMfVQsq7iYtO5R8v+demhP1Jt4 muZ/qyT1KkT87ce6CVNlnIvVQhISv06b/A/X/pnkBl/tVdVSXPq8/b5zRUxHEF1V FpEEE1+Ak3Avr5Il8/N0tPhJ+ZQIuFLCMTJHS+ObseH8KqbTTvUdeIk1Ft+gHRDk 3g0xQzVB0QgiOc0A6qPIPx2CiWPD56GiNI8BAI1KKPEl4FQm7F0s3VeQ5hIYUpHM Pp753u50y+ItWekOSKB9l37J1SL30RWIncYgzQBnJCV2tLofg5DU2zTPi81hyi9Q pOrd+vfrChRIwIld5XFp0kE0rtBd8/aC1cgAEt87TNAHjUaUKZznZt72EvX41+bN 40qg1SKSHxES5cUzeQAUBRxzgoHKdSw3cgW9JsPZJcUMi4/D38crzrTAN0ZugqSs MV8ElNwsdPENV9V65WlYfp50SbdYLOk3J8/9ME3CXUtP2c3+8eDqU9SKk5vjtc+X OV/4PyHNBP9cLIysHfiQt98HUTSYrp0j3DfjxYolSY8Gaha2q+XkeZE0rHvEPmRW fZ72UVmoFngErglxoLMPtEADwrKkSyGUkkmNiM8Ym0pinW9hf3s= =LlMa -----END PGP SIGNATURE----- Sun Oct 6 08:48:43 UTC 2024 I: Checking whether the package is not for us Sun Oct 6 08:48:43 UTC 2024 I: Starting 1st build on remote node virt32a-armhf-rb.debian.net. Sun Oct 6 08:48:43 UTC 2024 I: Preparing to do remote build '1' on virt32a-armhf-rb.debian.net. Sun Oct 6 08:49:22 UTC 2024 I: Deleting $TMPDIR on virt32a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Oct 5 20:48:50 -12 2024 I: pbuilder-time-stamp: 1728204530 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [r-bioc-scrnaseq_2.18.0+ds-1.dsc] I: copying [./r-bioc-scrnaseq_2.18.0+ds.orig.tar.xz] I: copying [./r-bioc-scrnaseq_2.18.0+ds-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Aug 18 10:40:31 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./r-bioc-scrnaseq_2.18.0+ds-1.dsc: no acceptable signature found dpkg-source: info: extracting r-bioc-scrnaseq in r-bioc-scrnaseq-2.18.0+ds dpkg-source: info: unpacking r-bioc-scrnaseq_2.18.0+ds.orig.tar.xz dpkg-source: info: unpacking r-bioc-scrnaseq_2.18.0+ds-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying skip-online-tests dpkg-source: info: applying skip-jsonvalidate-test I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1584/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='c654698dc33b41a781a567924f257fb5' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1584' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.tmiTuRJp/pbuilderrc_A0nH --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.tmiTuRJp/b1 --logfile b1/build.log r-bioc-scrnaseq_2.18.0+ds-1.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32a 6.1.0-26-armmp-lpae #1 SMP Debian 6.1.112-1 (2024-09-30) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1584/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-bioc-singlecellexperiment (>= 1.26.0), r-cran-matrix, r-bioc-biocgenerics (>= 0.50.0), r-bioc-s4vectors (>= 0.42.1), r-bioc-sparsearray (>= 1.4.8), r-bioc-delayedarray (>= 0.30.1), r-bioc-genomicranges (>= 1.56.1), r-bioc-summarizedexperiment (>= 1.34.0), r-bioc-experimenthub (>= 2.12.0), r-bioc-annotationhub (>= 3.12.0), r-bioc-annotationdbi (>= 1.66.0), r-bioc-ensembldb (>= 2.28.0), r-bioc-genomicfeatures (>= 1.56.0), r-bioc-alabaster.base (>= 1.4.2+ds-2~0exp3), r-bioc-alabaster.matrix, r-bioc-alabaster.sce, r-bioc-gypsum (>= 1.0.1+ds-2~0exp1), r-cran-jsonlite, r-cran-dbi, r-cran-rsqlite, r-bioc-hdf5array (>= 1.32.0-1~0exp2) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19506 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-r; however: Package dh-r is not installed. pbuilder-satisfydepends-dummy depends on r-base-dev; however: Package r-base-dev is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-singlecellexperiment (>= 1.26.0); however: Package r-bioc-singlecellexperiment is not installed. pbuilder-satisfydepends-dummy depends on r-cran-matrix; however: Package r-cran-matrix is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-biocgenerics (>= 0.50.0); however: Package r-bioc-biocgenerics is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-s4vectors (>= 0.42.1); however: Package r-bioc-s4vectors is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-sparsearray (>= 1.4.8); however: Package r-bioc-sparsearray is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-delayedarray (>= 0.30.1); however: Package r-bioc-delayedarray is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-genomicranges (>= 1.56.1); however: Package r-bioc-genomicranges is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-summarizedexperiment (>= 1.34.0); however: Package r-bioc-summarizedexperiment is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-experimenthub (>= 2.12.0); however: Package r-bioc-experimenthub is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-annotationhub (>= 3.12.0); however: Package r-bioc-annotationhub is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-annotationdbi (>= 1.66.0); however: Package r-bioc-annotationdbi is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-ensembldb (>= 2.28.0); however: Package r-bioc-ensembldb is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-genomicfeatures (>= 1.56.0); however: Package r-bioc-genomicfeatures is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-alabaster.base (>= 1.4.2+ds-2~0exp3); however: Package r-bioc-alabaster.base is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-alabaster.matrix; however: Package r-bioc-alabaster.matrix is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-alabaster.sce; however: Package r-bioc-alabaster.sce is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-gypsum (>= 1.0.1+ds-2~0exp1); however: Package r-bioc-gypsum is not installed. pbuilder-satisfydepends-dummy depends on r-cran-jsonlite; however: Package r-cran-jsonlite is not installed. pbuilder-satisfydepends-dummy depends on r-cran-dbi; however: Package r-cran-dbi is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rsqlite; however: Package r-cran-rsqlite is not installed. pbuilder-satisfydepends-dummy depends on r-bioc-hdf5array (>= 1.32.0-1~0exp2); however: Package r-bioc-hdf5array is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-arm-linux-gnueabihf{a} gfortran-arm-linux-gnueabihf{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} m4{a} man-db{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} r-base-core{a} r-base-dev{a} r-bioc-biocgenerics{a} r-bioc-gypsum{a} r-bioc-s4vectors{a} r-cran-askpass{a} r-cran-bit{a} r-cran-bit64{a} r-cran-blob{a} r-cran-cachem{a} r-cran-cli{a} r-cran-cpp11{a} r-cran-curl{a} r-cran-dbi{a} r-cran-dbplyr{a} r-cran-dplyr{a} r-cran-fansi{a} r-cran-fastmap{a} r-cran-filelock{a} r-cran-generics{a} r-cran-glue{a} r-cran-httr{a} r-cran-httr2{a} r-cran-jsonlite{a} r-cran-lattice{a} r-cran-lifecycle{a} r-cran-magrittr{a} r-cran-matrix{a} r-cran-memoise{a} r-cran-mime{a} r-cran-openssl{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-plogr{a} r-cran-purrr{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rlang{a} r-cran-rsqlite{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-sys{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-withr{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl lynx publicsuffix r-cran-bench r-cran-brio r-cran-broom r-cran-callr r-cran-clipr r-cran-covr r-cran-crayon r-cran-data.table r-cran-dbitest r-cran-decor r-cran-desc r-cran-digest r-cran-docopt r-cran-formattable r-cran-fs r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-jpeg r-cran-knitr r-cran-later r-cran-lintr r-cran-lobstr r-cran-lubridate r-cran-mockery r-cran-mockr r-cran-pkgdown r-cran-pkgload r-cran-png r-cran-processx r-cran-progress r-cran-promises r-cran-ps r-cran-r.rsp r-cran-rcpp r-cran-readr r-cran-rmariadb r-cran-rmarkdown r-cran-rmysql r-cran-rpostgresql r-cran-rprojroot r-cran-rstudioapi r-cran-rvest r-cran-scales r-cran-sf r-cran-sodium r-cran-spelling r-cran-testthat r-cran-tidyverse r-cran-unitizer r-cran-usethis r-cran-waldo r-cran-webfakes r-cran-webutils r-cran-whoami r-cran-xml2 r-cran-zeallot r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 231 newly installed, 0 to remove and 0 not upgraded. Need to get 119 MB of archives. After unpacking 301 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: r-bioc-singlecellexperiment (>= 1.26.0) but it is not installable Depends: r-bioc-sparsearray (>= 1.4.8) which is a virtual package and is not provided by any available package Depends: r-bioc-delayedarray (>= 0.30.1) which is a virtual package and is not provided by any available package Depends: r-bioc-genomicranges (>= 1.56.1) which is a virtual package and is not provided by any available package Depends: r-bioc-summarizedexperiment (>= 1.34.0) but it is not installable Depends: r-bioc-experimenthub (>= 2.12.0) but it is not installable Depends: r-bioc-annotationhub (>= 3.12.0) but it is not installable Depends: r-bioc-annotationdbi (>= 1.66.0) but it is not installable Depends: r-bioc-ensembldb (>= 2.28.0) but it is not installable Depends: r-bioc-genomicfeatures (>= 1.56.0) but it is not installable Depends: r-bioc-alabaster.base (>= 1.4.2+ds-2~0exp3) which is a virtual package and is not provided by any available package Depends: r-bioc-alabaster.matrix which is a virtual package and is not provided by any available package Depends: r-bioc-alabaster.sce but it is not installable Depends: r-bioc-hdf5array (>= 1.32.0-1~0exp2) which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-arm-linux-gnueabihf{a} gfortran-arm-linux-gnueabihf{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1t64{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-14-dev{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu72{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16t64{a} libpsl5t64{a} libreadline-dev{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6t64{a} m4{a} man-db{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} r-base-core{a} r-base-dev{a} r-bioc-biocgenerics{a} r-bioc-gypsum{a} r-bioc-s4vectors{a} r-cran-askpass{a} r-cran-bit{a} r-cran-bit64{a} r-cran-blob{a} r-cran-cachem{a} r-cran-cli{a} r-cran-cpp11{a} r-cran-curl{a} r-cran-dbi{a} r-cran-dbplyr{a} r-cran-dplyr{a} r-cran-fansi{a} r-cran-fastmap{a} r-cran-filelock{a} r-cran-generics{a} r-cran-glue{a} r-cran-httr{a} r-cran-httr2{a} r-cran-jsonlite{a} r-cran-lattice{a} r-cran-lifecycle{a} r-cran-magrittr{a} r-cran-matrix{a} r-cran-memoise{a} r-cran-mime{a} r-cran-openssl{a} r-cran-pillar{a} r-cran-pkgconfig{a} r-cran-plogr{a} r-cran-purrr{a} r-cran-r6{a} r-cran-rappdirs{a} r-cran-rlang{a} r-cran-rsqlite{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-sys{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-utf8{a} r-cran-vctrs{a} r-cran-withr{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage krb5-locales libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl lynx publicsuffix r-cran-bench r-cran-brio r-cran-broom r-cran-callr r-cran-clipr r-cran-covr r-cran-crayon r-cran-data.table r-cran-dbitest r-cran-decor r-cran-desc r-cran-digest r-cran-docopt r-cran-formattable r-cran-fs r-cran-gert r-cran-ggplot2 r-cran-gh r-cran-hms r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-jpeg r-cran-knitr r-cran-later r-cran-lintr r-cran-lobstr r-cran-lubridate r-cran-mockery r-cran-mockr r-cran-pkgdown r-cran-pkgload r-cran-png r-cran-processx r-cran-progress r-cran-promises r-cran-ps r-cran-r.rsp r-cran-rcpp r-cran-readr r-cran-rmariadb r-cran-rmarkdown r-cran-rmysql r-cran-rpostgresql r-cran-rprojroot r-cran-rstudioapi r-cran-rvest r-cran-scales r-cran-sf r-cran-sodium r-cran-spelling r-cran-testthat r-cran-tidyverse r-cran-unitizer r-cran-usethis r-cran-waldo r-cran-webfakes r-cran-webutils r-cran-whoami r-cran-xml2 r-cran-zeallot r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 231 newly installed, 0 to remove and 0 not upgraded. Need to get 119 MB of archives. After unpacking 301 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1584 and its subdirectories Sun Oct 6 08:49:25 UTC 2024 W: No second build log, what happened? Sun Oct 6 08:49:25 UTC 2024 W: Downloading the build dependencies failed Sun Oct 6 08:49:25 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Sun Oct 6 08:49:25 UTC 2024 W: Network problems are automatically rescheduled after some hours.