Wed Nov 20 06:52:24 UTC 2024 I: starting to build fenicsx-performance-tests/unstable/armhf on jenkins on '2024-11-20 06:52' Wed Nov 20 06:52:24 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_34/12487/console.log Wed Nov 20 06:52:24 UTC 2024 I: Downloading source for unstable/fenicsx-performance-tests=0.9.0-2 --2024-11-20 06:52:24-- http://deb.debian.org/debian/pool/main/f/fenicsx-performance-tests/fenicsx-performance-tests_0.9.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2467 (2.4K) [text/prs.lines.tag] Saving to: ‘fenicsx-performance-tests_0.9.0-2.dsc’ 0K .. 100% 321M=0s 2024-11-20 06:52:24 (321 MB/s) - ‘fenicsx-performance-tests_0.9.0-2.dsc’ saved [2467/2467] Wed Nov 20 06:52:24 UTC 2024 I: fenicsx-performance-tests_0.9.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: fenicsx-performance-tests Binary: fenicsx-performance-tests, fenicsx-performance-tests-source Architecture: any all Version: 0.9.0-2 Maintainer: Debian Science Maintainers Uploaders: Drew Parsons , Francesco Ballarin Homepage: https://github.com/FEniCS/performance-test Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/science-team/fenics/fenicsx-performance-tests Vcs-Git: https://salsa.debian.org/science-team/fenics/fenicsx-performance-tests.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@ Build-Depends: debhelper-compat (= 13), cmake (>= 3.16~), libboost-dev (>= 1.70~), libdolfinx-dev (>= 1:0.9~), libdolfinx-real-dev, mpi-default-dev, python3-ffcx Package-List: fenicsx-performance-tests deb libdevel optional arch=any fenicsx-performance-tests-source deb libdevel optional arch=all Checksums-Sha1: 0bae6b5b5310de362337f147f3308ab4b450f7cb 21022 fenicsx-performance-tests_0.9.0.orig.tar.gz e42689299be073e6bcdecbdc72343b665b2e4fea 6360 fenicsx-performance-tests_0.9.0-2.debian.tar.xz Checksums-Sha256: d7d39eb7e8964658687ef2240ad79e43392ceaa8c17117bd641b97a726c7d111 21022 fenicsx-performance-tests_0.9.0.orig.tar.gz 6f391125ffb809beae151e8c8411547f5f2fd9627153e1d72396ec1fdc7db738 6360 fenicsx-performance-tests_0.9.0-2.debian.tar.xz Files: e6427a2c02c8364c21d3f31ffafff18b 21022 fenicsx-performance-tests_0.9.0.orig.tar.gz 6a309742bcdb49f72d3fbf49a21e57ad 6360 fenicsx-performance-tests_0.9.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEG10EseUHu/A2aeK4AfNfwz5zr4wFAmcwyAAACgkQAfNfwz5z r4x6+A//d1iYy+wPAYtjIKSLh9RaULqBLOmwY3Gx/WxLSOHvFl2kl6MJmdsPxK9A 31w4hnGNADDYJkTRi9RL1qif7ID+SGLwoFBYvOZVgL0MOVajshwPLMJZeJSRZ03s ojSrH7p90LLXSHE+OgWdDy1XKE9RtB2gmg8gDhmQeTuTOa5Ck+gDrtFCvQQm8RU7 OfBIMsdr6nhcoSkRIUM9nD4Ip+lSyxBmHphVYs46nQkHuBvPfksTGjs0n15J4ist nfXPvkCQcK5jfHbPt0GYZccSFnQkOr1YQDBIGiSwqFI5zazc5Txi2U0cnagmblm9 Y/L9dwkIIRxBzTzBchyN9nifjBtXN2KxWf6YERnTRoCvYSg5JAp8th/MCsGvIS1P t5swOLTHrG+AMVSOrLnleGmqUh6Wqtq6N7/aO50ErWIZqUZM+EZMhH4fDdA9rBfw W56rls4DqqG4q9L5gNJBD+Mb+JxBnrSxTmYmql5FOI8S4/cej8lQr9jcKxSwFD04 vzldYbl8Vx89GZa4qe1wV7Hbj/izvyCjZ+F79PaV1GQ/l8N/hi66vT/yOZOtAdGD BQ5kLlmAiz30kB6xAC/uNaUpdJ9SBUO0WKj/NiaQ9Wnwu2fxzUR2x6hieqrKKECe +77pX4mAdODktGwapB3Vh7rX/ukItzSycNnQzaNmNJj8uOpDLcs= =6WIY -----END PGP SIGNATURE----- Wed Nov 20 06:52:24 UTC 2024 I: Checking whether the package is not for us Wed Nov 20 06:52:24 UTC 2024 I: Starting 1st build on remote node virt32z-armhf-rb.debian.net. Wed Nov 20 06:52:24 UTC 2024 I: Preparing to do remote build '1' on virt32z-armhf-rb.debian.net. Wed Nov 20 06:58:23 UTC 2024 I: Deleting $TMPDIR on virt32z-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Nov 19 18:52:30 -12 2024 I: pbuilder-time-stamp: 1732085550 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [fenicsx-performance-tests_0.9.0-2.dsc] I: copying [./fenicsx-performance-tests_0.9.0.orig.tar.gz] I: copying [./fenicsx-performance-tests_0.9.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Nov 10 14:49:36 2024 gpgv: using RSA key 1B5D04B1E507BBF03669E2B801F35FC33E73AF8C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fenicsx-performance-tests_0.9.0-2.dsc: no acceptable signature found dpkg-source: info: extracting fenicsx-performance-tests in fenicsx-performance-tests-0.9.0 dpkg-source: info: unpacking fenicsx-performance-tests_0.9.0.orig.tar.gz dpkg-source: info: unpacking fenicsx-performance-tests_0.9.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying enable_complex_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/13302/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='6a70ac8c8ec04293b48aaacba064da96' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='13302' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.MpJhjcB8/pbuilderrc_eXag --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.MpJhjcB8/b1 --logfile b1/build.log fenicsx-performance-tests_0.9.0-2.dsc' SUDO_GID='110' SUDO_UID='103' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32z 6.1.0-27-armmp-lpae #1 SMP Debian 6.1.115-1 (2024-11-01) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/13302/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake (>= 3.16~), libboost-dev (>= 1.70~), libdolfinx-dev (>= 1:0.9~), libdolfinx-real-dev, mpi-default-dev, python3-ffcx dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19686 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake (>= 3.16~); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev (>= 1.70~); however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libdolfinx-dev (>= 1:0.9~); however: Package libdolfinx-dev is not installed. pbuilder-satisfydepends-dummy depends on libdolfinx-real-dev; however: Package libdolfinx-real-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx; however: Package python3-ffcx is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} catch2{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-arm-linux-gnueabihf{a} gfortran-arm-linux-gnueabihf{a} groff-base{a} hwloc-nox{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libaec-dev{a} libaec0{a} libamd3{a} libarchive-zip-perl{a} libarchive13t64{a} libarpack2-dev{a} libarpack2t64{a} libbasix-dev{a} libbasix0.9{a} libblas-dev{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libbtf2{a} libc6-dbg{a} libcamd3{a} libcatch2-dev{a} libccolamd3{a} libcholmod5{a} libcolamd3{a} libcom-err2{a} libcombblas2.0.0t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdebhelper-perl{a} libdolfinx-dev{a} libdolfinx-real-dev{a} libdolfinx-real0.9{a} libeigen3-dev{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libfmt-dev{a} libfmt10{a} libgfortran-14-dev{a} libgfortran5{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libhdf5-mpi-dev{a} libhdf5-mpich-103-1t64{a} libhdf5-mpich-cpp-103-1t64{a} libhdf5-mpich-dev{a} libhdf5-mpich-fortran-102t64{a} libhdf5-mpich-hl-100t64{a} libhdf5-mpich-hl-cpp-100t64{a} libhdf5-mpich-hl-fortran-100t64{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libhypre-2.31.0{a} libhypre-dev{a} libibverbs1{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libklu2{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} libldap-dev{a} libldl3{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmetis5{a} libmpich-dev{a} libmpich12{a} libmumps-5.7{a} libmumps-dev{a} libmumps-headers-dev{a} libnghttp2-14{a} libnghttp2-dev{a} libnl-3-200{a} libnl-route-3-200{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libopenmpi3t64{a} libp11-kit-dev{a} libparpack2-dev{a} libparpack2t64{a} libparu1{a} libpciaccess0{a} libpetsc-real3.21{a} libpetsc-real3.21-dev{a} libpetsc3.21-dev-common{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libptscotch-7.0{a} libptscotch-dev{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} librbio4{a} librdmacm1t64{a} libreadline8t64{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-mpi-dev{a} libscalapack-mpich-dev{a} libscalapack-mpich2.2{a} libscotch-7.0{a} libscotch-dev{a} libslepc-real3.21{a} libslepc-real3.21-dev{a} libslurm41t64{a} libspdlog-dev{a} libspdlog1.12{a} libspex3{a} libspqr4{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist8{a} libsuperlu7{a} libsz2{a} libtasn1-6-dev{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libumfpack6{a} libunbound8{a} libuv1t64{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxml2{a} libxml2-dev{a} libxnvctrl0{a} libyaml-0-2{a} libyaml-dev{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} mpich{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-autocommand{a} python3-basix{a} python3-cffi{a} python3-cffi-backend{a} python3-dev{a} python3-ffcx{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-pkg-resources{a} python3-ply{a} python3-pycparser{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-ufl{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} valgrind{a} valgrind-mpi{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl gdb ibverbs-providers javascript-common krb5-locales ksh ksh93u+m libarchive-cpio-perl libgl-dev libgraphblas-dev libldap-common libmail-sendmail-perl libpetsc3.21-dev-examples libsasl2-modules libssl3 libtasn1-doc linux-sysctl-defaults lynx mksh psmisc publicsuffix wget zsh 0 packages upgraded, 303 newly installed, 0 to remove and 0 not upgraded. Need to get 183 MB of archives. After unpacking 811 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf libpython3.12-minimal armhf 3.12.7-3 [800 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf python3.12-minimal armhf 3.12.7-3 [1808 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf python3-minimal armhf 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf libcom-err2 armhf 1.47.1-1+b1 [22.3 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 12 http://deb.debian.org/debian unstable/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 13 http://deb.debian.org/debian unstable/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3+b1 [71.3 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf libnsl2 armhf 1.3.0-3+b3 [35.0 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf libreadline8t64 armhf 8.2-5 [146 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libpython3.12-stdlib armhf 3.12.7-3 [1819 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf python3.12 armhf 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf libpython3-stdlib armhf 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main armhf python3 armhf 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40.2-11 [83.6 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3 [493 kB] Get: 37 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf autopoint all 0.22.5-2 [723 kB] Get: 40 http://deb.debian.org/debian unstable/main armhf libcatch2-dev armhf 3.7.1-0.4 [584 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf catch2 all 3.7.1-0.4 [5052 B] Get: 42 http://deb.debian.org/debian unstable/main armhf cmake-data all 3.31.0-1 [2265 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-5+b1 [9088 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [605 kB] Get: 45 http://deb.debian.org/debian unstable/main armhf libarchive13t64 armhf 3.7.4-1.1 [306 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf libbrotli1 armhf 1.1.0-2+b6 [282 kB] Get: 47 http://deb.debian.org/debian unstable/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8 [18.2 kB] Get: 48 http://deb.debian.org/debian unstable/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8 [50.2 kB] Get: 49 http://deb.debian.org/debian unstable/main armhf libldap-2.5-0 armhf 2.5.18+dfsg-3+b1 [163 kB] Get: 50 http://deb.debian.org/debian unstable/main armhf libnghttp2-14 armhf 1.64.0-1 [62.9 kB] Get: 51 http://deb.debian.org/debian unstable/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB] Get: 52 http://deb.debian.org/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf libcurl4t64 armhf 8.11.0-1 [303 kB] Get: 55 http://deb.debian.org/debian unstable/main armhf libjsoncpp26 armhf 1.9.6-2 [70.0 kB] Get: 56 http://deb.debian.org/debian unstable/main armhf librhash1 armhf 1.4.5-1 [143 kB] Get: 57 http://deb.debian.org/debian unstable/main armhf libuv1t64 armhf 1.48.0-7 [134 kB] Get: 58 http://deb.debian.org/debian unstable/main armhf cmake armhf 3.31.0-1 [5744 kB] Get: 59 http://deb.debian.org/debian unstable/main armhf comerr-dev armhf 2.1-1.47.1-1+b1 [54.3 kB] Get: 60 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 61 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-8 [517 kB] Get: 62 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 63 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 64 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 65 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 66 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 67 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 68 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 69 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 70 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 71 http://deb.debian.org/debian unstable/main armhf debhelper all 13.20 [915 kB] Get: 72 http://deb.debian.org/debian unstable/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 73 http://deb.debian.org/debian unstable/main armhf libgfortran5 armhf 14.2.0-8 [263 kB] Get: 74 http://deb.debian.org/debian unstable/main armhf libgfortran-14-dev armhf 14.2.0-8 [315 kB] Get: 75 http://deb.debian.org/debian unstable/main armhf gfortran-14-arm-linux-gnueabihf armhf 14.2.0-8 [8724 kB] Get: 76 http://deb.debian.org/debian unstable/main armhf gfortran-14 armhf 14.2.0-8 [12.2 kB] Get: 77 http://deb.debian.org/debian unstable/main armhf gfortran-arm-linux-gnueabihf armhf 4:14.2.0-1 [1288 B] Get: 78 http://deb.debian.org/debian unstable/main armhf gfortran armhf 4:14.2.0-1 [1428 B] Get: 79 http://deb.debian.org/debian unstable/main armhf libhwloc15 armhf 2.11.2-1 [134 kB] Get: 80 http://deb.debian.org/debian unstable/main armhf hwloc-nox armhf 2.11.2-1 [201 kB] Get: 81 http://deb.debian.org/debian unstable/main armhf icu-devtools armhf 72.1-5+b1 [187 kB] Get: 82 http://deb.debian.org/debian unstable/main armhf libgssrpc4t64 armhf 1.21.3-3 [52.5 kB] Get: 83 http://deb.debian.org/debian unstable/main armhf libkadm5clnt-mit12 armhf 1.21.3-3 [37.0 kB] Get: 84 http://deb.debian.org/debian unstable/main armhf libkdb5-10t64 armhf 1.21.3-3 [37.1 kB] Get: 85 http://deb.debian.org/debian unstable/main armhf libkadm5srv-mit12 armhf 1.21.3-3 [46.7 kB] Get: 86 http://deb.debian.org/debian unstable/main armhf krb5-multidev armhf 1.21.3-3 [126 kB] Get: 87 http://deb.debian.org/debian unstable/main armhf libaec0 armhf 1.1.3-1+b1 [21.9 kB] Get: 88 http://deb.debian.org/debian unstable/main armhf libsz2 armhf 1.1.3-1+b1 [8036 B] Get: 89 http://deb.debian.org/debian unstable/main armhf libaec-dev armhf 1.1.3-1+b1 [19.3 kB] Get: 90 http://deb.debian.org/debian unstable/main armhf libsuitesparseconfig7 armhf 1:7.8.3+dfsg-2 [23.2 kB] Get: 91 http://deb.debian.org/debian unstable/main armhf libamd3 armhf 1:7.8.3+dfsg-2 [42.0 kB] Get: 92 http://deb.debian.org/debian unstable/main armhf libblas3 armhf 3.12.0-3+b1 [111 kB] Get: 93 http://deb.debian.org/debian unstable/main armhf liblapack3 armhf 3.12.0-3+b1 [1828 kB] Get: 94 http://deb.debian.org/debian unstable/main armhf libarpack2t64 armhf 3.9.1-1.1+b1 [85.0 kB] Get: 95 http://deb.debian.org/debian unstable/main armhf libblas-dev armhf 3.12.0-3+b1 [121 kB] Get: 96 http://deb.debian.org/debian unstable/main armhf liblapack-dev armhf 3.12.0-3+b1 [1930 kB] Get: 97 http://deb.debian.org/debian unstable/main armhf libarpack2-dev armhf 3.9.1-1.1+b1 [103 kB] Get: 98 http://deb.debian.org/debian unstable/main armhf libbasix0.9 armhf 0.9.0-2+b1 [382 kB] Get: 99 http://deb.debian.org/debian unstable/main armhf libpkgconf3 armhf 1.8.1-4 [31.8 kB] Get: 100 http://deb.debian.org/debian unstable/main armhf pkgconf-bin armhf 1.8.1-4 [29.2 kB] Get: 101 http://deb.debian.org/debian unstable/main armhf pkgconf armhf 1.8.1-4 [26.1 kB] Get: 102 http://deb.debian.org/debian unstable/main armhf libeigen3-dev all 3.4.0-4 [1041 kB] Get: 103 http://deb.debian.org/debian unstable/main armhf libbasix-dev armhf 0.9.0-2+b1 [67.1 kB] Get: 104 http://deb.debian.org/debian unstable/main armhf libboost1.83-dev armhf 1.83.0-3.2+b1 [10.6 MB] Get: 105 http://deb.debian.org/debian unstable/main armhf libboost-atomic1.83.0 armhf 1.83.0-3.2+b1 [233 kB] Get: 106 http://deb.debian.org/debian unstable/main armhf libboost-atomic1.83-dev armhf 1.83.0-3.2+b1 [234 kB] Get: 107 http://deb.debian.org/debian unstable/main armhf libboost-chrono1.83.0t64 armhf 1.83.0-3.2+b1 [238 kB] Get: 108 http://deb.debian.org/debian unstable/main armhf libboost-chrono1.83-dev armhf 1.83.0-3.2+b1 [244 kB] Get: 109 http://deb.debian.org/debian unstable/main armhf libboost-chrono-dev armhf 1.83.0.2+b2 [4212 B] Get: 110 http://deb.debian.org/debian unstable/main armhf libboost-date-time1.83.0 armhf 1.83.0-3.2+b1 [230 kB] Get: 111 http://deb.debian.org/debian unstable/main armhf libboost-serialization1.83.0 armhf 1.83.0-3.2+b1 [317 kB] Get: 112 http://deb.debian.org/debian unstable/main armhf libboost-serialization1.83-dev armhf 1.83.0-3.2+b1 [384 kB] Get: 113 http://deb.debian.org/debian unstable/main armhf libboost-date-time1.83-dev armhf 1.83.0-3.2+b1 [239 kB] Get: 114 http://deb.debian.org/debian unstable/main armhf libboost-dev armhf 1.83.0.2+b2 [3832 B] Get: 115 http://deb.debian.org/debian unstable/main armhf libboost-filesystem1.83.0 armhf 1.83.0-3.2+b1 [271 kB] Get: 116 http://deb.debian.org/debian unstable/main armhf libboost-system1.83.0 armhf 1.83.0-3.2+b1 [230 kB] Get: 117 http://deb.debian.org/debian unstable/main armhf libboost-system1.83-dev armhf 1.83.0-3.2+b1 [232 kB] Get: 118 http://deb.debian.org/debian unstable/main armhf libboost-filesystem1.83-dev armhf 1.83.0-3.2+b1 [286 kB] Get: 119 http://deb.debian.org/debian unstable/main armhf libboost-filesystem-dev armhf 1.83.0.2+b2 [3616 B] Get: 120 http://deb.debian.org/debian unstable/main armhf libboost-regex1.83.0 armhf 1.83.0-3.2+b1 [308 kB] Get: 121 http://deb.debian.org/debian unstable/main armhf libicu-dev armhf 72.1-5+b1 [10.1 MB] Get: 122 http://deb.debian.org/debian unstable/main armhf libboost-regex1.83-dev armhf 1.83.0-3.2+b1 [335 kB] Get: 123 http://deb.debian.org/debian unstable/main armhf libboost-iostreams1.83-dev armhf 1.83.0-3.2+b1 [261 kB] Get: 124 http://deb.debian.org/debian unstable/main armhf libboost-iostreams-dev armhf 1.83.0.2+b2 [3568 B] Get: 125 http://deb.debian.org/debian unstable/main armhf libboost-math1.83.0 armhf 1.83.0-3.2+b1 [328 kB] Get: 126 http://deb.debian.org/debian unstable/main armhf libboost-math1.83-dev armhf 1.83.0-3.2+b1 [347 kB] Get: 127 http://deb.debian.org/debian unstable/main armhf libboost-math-dev armhf 1.83.0.2+b2 [3788 B] Get: 128 http://deb.debian.org/debian unstable/main armhf libmpich12 armhf 4.2.0-14 [1498 kB] Get: 129 http://deb.debian.org/debian unstable/main armhf libboost-mpi1.83.0 armhf 1.83.0-3.2+b1 [264 kB] Get: 130 http://deb.debian.org/debian unstable/main armhf libnuma1 armhf 2.0.18-1+b1 [18.9 kB] Get: 131 http://deb.debian.org/debian unstable/main armhf libnuma-dev armhf 2.0.18-1+b1 [34.6 kB] Get: 132 http://deb.debian.org/debian unstable/main armhf libltdl7 armhf 2.4.7-8 [390 kB] Get: 133 http://deb.debian.org/debian unstable/main armhf libltdl-dev armhf 2.4.7-8 [162 kB] Get: 134 http://deb.debian.org/debian unstable/main armhf libhwloc-dev armhf 2.11.2-1 [226 kB] Get: 135 http://deb.debian.org/debian unstable/main armhf libslurm41t64 armhf 24.05.4-1 [683 kB] Get: 136 http://deb.debian.org/debian unstable/main armhf mpich armhf 4.2.0-14 [223 kB] Get: 137 http://deb.debian.org/debian unstable/main armhf libmpich-dev armhf 4.2.0-14 [2410 kB] Get: 138 http://deb.debian.org/debian unstable/main armhf mpi-default-dev armhf 1.17 [3148 B] Get: 139 http://deb.debian.org/debian unstable/main armhf libboost-mpi1.83-dev armhf 1.83.0-3.2+b1 [289 kB] Get: 140 http://deb.debian.org/debian unstable/main armhf libboost-mpi-dev armhf 1.83.0.2+b2 [3668 B] Get: 141 http://deb.debian.org/debian unstable/main armhf libboost-program-options1.83.0 armhf 1.83.0-3.2+b1 [327 kB] Get: 142 http://deb.debian.org/debian unstable/main armhf libboost-program-options1.83-dev armhf 1.83.0-3.2+b1 [369 kB] Get: 143 http://deb.debian.org/debian unstable/main armhf libboost-program-options-dev armhf 1.83.0.2+b2 [3604 B] Get: 144 http://deb.debian.org/debian unstable/main armhf libboost-serialization-dev armhf 1.83.0.2+b2 [3816 B] Get: 145 http://deb.debian.org/debian unstable/main armhf libboost-thread1.83.0 armhf 1.83.0-3.2+b1 [262 kB] Get: 146 http://deb.debian.org/debian unstable/main armhf libboost-thread1.83-dev armhf 1.83.0-3.2+b1 [275 kB] Get: 147 http://deb.debian.org/debian unstable/main armhf libboost-thread-dev armhf 1.83.0.2+b2 [3612 B] Get: 148 http://deb.debian.org/debian unstable/main armhf libboost-timer1.83.0 armhf 1.83.0-3.2+b1 [234 kB] Get: 149 http://deb.debian.org/debian unstable/main armhf libboost-timer1.83-dev armhf 1.83.0-3.2+b1 [236 kB] Get: 150 http://deb.debian.org/debian unstable/main armhf libboost-timer-dev armhf 1.83.0.2+b2 [3708 B] Get: 151 http://deb.debian.org/debian unstable/main armhf libbrotli-dev armhf 1.1.0-2+b6 [293 kB] Get: 152 http://deb.debian.org/debian unstable/main armhf libbtf2 armhf 1:7.8.3+dfsg-2 [25.5 kB] Get: 153 http://deb.debian.org/debian unstable/main armhf libc6-dbg armhf 2.40-3 [6579 kB] Get: 154 http://deb.debian.org/debian unstable/main armhf libcamd3 armhf 1:7.8.3+dfsg-2 [39.1 kB] Get: 155 http://deb.debian.org/debian unstable/main armhf libccolamd3 armhf 1:7.8.3+dfsg-2 [40.8 kB] Get: 156 http://deb.debian.org/debian unstable/main armhf libcolamd3 armhf 1:7.8.3+dfsg-2 [33.4 kB] Get: 157 http://deb.debian.org/debian unstable/main armhf libcholmod5 armhf 1:7.8.3+dfsg-2 [616 kB] Get: 158 http://deb.debian.org/debian unstable/main armhf libcombblas2.0.0t64 armhf 2.0.0-6 [256 kB] Get: 159 http://deb.debian.org/debian unstable/main armhf libidn2-dev armhf 2.3.7-2+b1 [119 kB] Get: 160 http://deb.debian.org/debian unstable/main armhf libkrb5-dev armhf 1.21.3-3 [15.8 kB] Get: 161 http://deb.debian.org/debian unstable/main armhf libldap-dev armhf 2.5.18+dfsg-3+b1 [282 kB] Get: 162 http://deb.debian.org/debian unstable/main armhf libnghttp2-dev armhf 1.64.0-1 [103 kB] Get: 163 http://deb.debian.org/debian unstable/main armhf libpsl-dev armhf 0.21.2-1.1+b1 [76.8 kB] Get: 164 http://deb.debian.org/debian unstable/main armhf libgmpxx4ldbl armhf 2:6.3.0+dfsg-2+b2 [328 kB] Get: 165 http://deb.debian.org/debian unstable/main armhf libgmp-dev armhf 2:6.3.0+dfsg-2+b2 [593 kB] Get: 166 http://deb.debian.org/debian unstable/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-10+b1 [164 kB] Get: 167 http://deb.debian.org/debian unstable/main armhf libunbound8 armhf 1.22.0-1 [539 kB] Get: 168 http://deb.debian.org/debian unstable/main armhf libgnutls-dane0t64 armhf 3.8.8-2 [440 kB] Get: 169 http://deb.debian.org/debian unstable/main armhf libgnutls-openssl27t64 armhf 3.8.8-2 [440 kB] Get: 170 http://deb.debian.org/debian unstable/main armhf libp11-kit-dev armhf 0.25.5-2+b1 [208 kB] Get: 171 http://deb.debian.org/debian unstable/main armhf libtasn1-6-dev armhf 4.19.0-3+b3 [93.2 kB] Get: 172 http://deb.debian.org/debian unstable/main armhf nettle-dev armhf 3.10-1+b1 [1313 kB] Get: 173 http://deb.debian.org/debian unstable/main armhf libgnutls28-dev armhf 3.8.8-2 [1328 kB] Get: 174 http://deb.debian.org/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] Get: 175 http://deb.debian.org/debian unstable/main armhf librtmp-dev armhf 2.4+20151223.gitfa8646d.1-2+b5 [63.6 kB] Get: 176 http://deb.debian.org/debian unstable/main armhf libssl-dev armhf 3.3.2-2 [2385 kB] Get: 177 http://deb.debian.org/debian unstable/main armhf libssh2-1-dev armhf 1.11.1-1 [378 kB] Get: 178 http://deb.debian.org/debian unstable/main armhf libzstd-dev armhf 1.5.6+dfsg-1+b1 [327 kB] Get: 179 http://deb.debian.org/debian unstable/main armhf libcurl4-openssl-dev armhf 8.11.0-1 [423 kB] Get: 180 http://deb.debian.org/debian unstable/main armhf libcxsparse4 armhf 1:7.8.3+dfsg-2 [80.6 kB] Get: 181 http://deb.debian.org/debian unstable/main armhf libfmt10 armhf 10.1.1+ds1-4 [118 kB] Get: 182 http://deb.debian.org/debian unstable/main armhf libhdf5-mpich-103-1t64 armhf 1.10.10+repack-4 [1251 kB] Get: 183 http://deb.debian.org/debian unstable/main armhf libfftw3-double3 armhf 3.3.10-2 [330 kB] Get: 184 http://deb.debian.org/debian unstable/main armhf libfftw3-single3 armhf 3.3.10-2 [520 kB] Get: 185 http://deb.debian.org/debian unstable/main armhf libfftw3-mpi3 armhf 3.3.10-2 [44.2 kB] Get: 186 http://deb.debian.org/debian unstable/main armhf libmetis5 armhf 5.1.0.dfsg-7+b2 [139 kB] Get: 187 http://deb.debian.org/debian unstable/main armhf libptscotch-7.0 armhf 7.0.5-1 [647 kB] Get: 188 http://deb.debian.org/debian unstable/main armhf libsuperlu-dist8 armhf 8.2.1+dfsg1-5 [485 kB] Get: 189 http://deb.debian.org/debian unstable/main armhf libhypre-2.31.0 armhf 2.31.0-3 [1264 kB] Get: 190 http://deb.debian.org/debian unstable/main armhf libklu2 armhf 1:7.8.3+dfsg-2 [84.2 kB] Get: 191 http://deb.debian.org/debian unstable/main armhf mpi-default-bin armhf 1.17 [2368 B] Get: 192 http://deb.debian.org/debian unstable/main armhf libscalapack-mpich2.2 armhf 2.2.1-5 [1258 kB] Get: 193 http://deb.debian.org/debian unstable/main armhf libmumps-5.7 armhf 5.7.3-3 [1728 kB] Get: 194 http://deb.debian.org/debian unstable/main armhf libspqr4 armhf 1:7.8.3+dfsg-2 [132 kB] Get: 195 http://deb.debian.org/debian unstable/main armhf libsuperlu7 armhf 7.0.0+dfsg1-2 [142 kB] Get: 196 http://deb.debian.org/debian unstable/main armhf libumfpack6 armhf 1:7.8.3+dfsg-2 [274 kB] Get: 197 http://deb.debian.org/debian unstable/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB] Get: 198 http://deb.debian.org/debian unstable/main armhf libxdmcp6 armhf 1:1.1.5-1 [26.4 kB] Get: 199 http://deb.debian.org/debian unstable/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB] Get: 200 http://deb.debian.org/debian unstable/main armhf libx11-data all 2:1.8.10-2 [337 kB] Get: 201 http://deb.debian.org/debian unstable/main armhf libx11-6 armhf 2:1.8.10-2 [750 kB] Get: 202 http://deb.debian.org/debian unstable/main armhf libyaml-0-2 armhf 0.2.5-1+b2 [45.4 kB] Get: 203 http://deb.debian.org/debian unstable/main armhf ocl-icd-libopencl1 armhf 2.3.2-1+b2 [37.3 kB] Get: 204 http://deb.debian.org/debian unstable/main armhf libpetsc-real3.21 armhf 3.21.6+dfsg1-2 [5835 kB] Get: 205 http://deb.debian.org/debian unstable/main armhf libpugixml1v5 armhf 1.14-2 [76.5 kB] Get: 206 http://deb.debian.org/debian unstable/main armhf libevent-core-2.1-7t64 armhf 2.1.12-stable-10+b1 [122 kB] Get: 207 http://deb.debian.org/debian unstable/main armhf libevent-pthreads-2.1-7t64 armhf 2.1.12-stable-10+b1 [53.9 kB] Get: 208 http://deb.debian.org/debian unstable/main armhf libnl-3-200 armhf 3.7.0-0.3+b1 [52.0 kB] Get: 209 http://deb.debian.org/debian unstable/main armhf libnl-route-3-200 armhf 3.7.0-0.3+b1 [154 kB] Get: 210 http://deb.debian.org/debian unstable/main armhf libibverbs1 armhf 52.0-2+b1 [54.8 kB] Get: 211 http://deb.debian.org/debian unstable/main armhf librdmacm1t64 armhf 52.0-2+b1 [62.2 kB] Get: 212 http://deb.debian.org/debian unstable/main armhf libfabric1 armhf 1.17.0-3.1 [387 kB] Get: 213 http://deb.debian.org/debian unstable/main armhf libpciaccess0 armhf 0.17-3+b2 [49.2 kB] Get: 214 http://deb.debian.org/debian unstable/main armhf libxext6 armhf 2:1.3.4-1+b2 [45.2 kB] Get: 215 http://deb.debian.org/debian unstable/main armhf libxnvctrl0 armhf 535.171.04-1+b1 [13.0 kB] Get: 216 http://deb.debian.org/debian unstable/main armhf libhwloc-plugins armhf 2.11.2-1 [16.1 kB] Get: 217 http://deb.debian.org/debian unstable/main armhf libopenmpi3t64 armhf 4.1.6-13.3 [2216 kB] Get: 218 http://deb.debian.org/debian unstable/main armhf libparpack2t64 armhf 3.9.1-1.1+b1 [81.3 kB] Get: 219 http://deb.debian.org/debian unstable/main armhf libslepc-real3.21 armhf 3.21.2+dfsg1-2 [988 kB] Get: 220 http://deb.debian.org/debian unstable/main armhf libspdlog1.12 armhf 1:1.12.0+ds-2+b3 [92.9 kB] Get: 221 http://deb.debian.org/debian unstable/main armhf libdolfinx-real0.9 armhf 1:0.9.0-3 [466 kB] Get: 222 http://deb.debian.org/debian unstable/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 223 http://deb.debian.org/debian unstable/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 224 http://deb.debian.org/debian unstable/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 225 http://deb.debian.org/debian unstable/main armhf libldl3 armhf 1:7.8.3+dfsg-2 [24.2 kB] Get: 226 http://deb.debian.org/debian unstable/main armhf libsuitesparse-mongoose3 armhf 1:7.8.3+dfsg-2 [48.7 kB] Get: 227 http://deb.debian.org/debian unstable/main armhf librbio4 armhf 1:7.8.3+dfsg-2 [40.8 kB] Get: 228 http://deb.debian.org/debian unstable/main armhf libspex3 armhf 1:7.8.3+dfsg-2 [58.7 kB] Get: 229 http://deb.debian.org/debian unstable/main armhf libparu1 armhf 1:7.8.3+dfsg-2 [67.2 kB] Get: 230 http://deb.debian.org/debian unstable/main armhf libsuitesparse-dev armhf 1:7.8.3+dfsg-2 [1459 kB] Get: 231 http://deb.debian.org/debian unstable/main armhf libscotch-7.0 armhf 7.0.5-1 [419 kB] Get: 232 http://deb.debian.org/debian unstable/main armhf libscotch-dev armhf 7.0.5-1 [1594 kB] Get: 233 http://deb.debian.org/debian unstable/main armhf libptscotch-dev armhf 7.0.5-1 [1389 kB] Get: 234 http://deb.debian.org/debian unstable/main armhf libscalapack-mpich-dev armhf 2.2.1-5 [10.7 kB] Get: 235 http://deb.debian.org/debian unstable/main armhf libscalapack-mpi-dev armhf 2.2.1-5 [5888 B] Get: 236 http://deb.debian.org/debian unstable/main armhf libfftw3-bin armhf 3.3.10-2 [41.5 kB] Get: 237 http://deb.debian.org/debian unstable/main armhf libfftw3-dev armhf 3.3.10-2 [835 kB] Get: 238 http://deb.debian.org/debian unstable/main armhf libfftw3-mpi-dev armhf 3.3.10-2 [51.9 kB] Get: 239 http://deb.debian.org/debian unstable/main armhf opencl-c-headers all 3.0~2024.05.08-1 [46.1 kB] Get: 240 http://deb.debian.org/debian unstable/main armhf opencl-clhpp-headers all 3.0~2024.05.08-1 [49.8 kB] Get: 241 http://deb.debian.org/debian unstable/main armhf ocl-icd-opencl-dev armhf 2.3.2-1+b2 [8672 B] Get: 242 http://deb.debian.org/debian unstable/main armhf libhdf5-mpich-fortran-102t64 armhf 1.10.10+repack-4 [79.2 kB] Get: 243 http://deb.debian.org/debian unstable/main armhf libhdf5-mpich-hl-100t64 armhf 1.10.10+repack-4 [62.2 kB] Get: 244 http://deb.debian.org/debian unstable/main armhf libhdf5-mpich-hl-fortran-100t64 armhf 1.10.10+repack-4 [34.9 kB] Get: 245 http://deb.debian.org/debian unstable/main armhf libhdf5-mpich-cpp-103-1t64 armhf 1.10.10+repack-4 [121 kB] Get: 246 http://deb.debian.org/debian unstable/main armhf libhdf5-mpich-hl-cpp-100t64 armhf 1.10.10+repack-4 [21.0 kB] Get: 247 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo armhf 1:2.1.5-3+b1 [145 kB] Get: 248 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo-dev armhf 1:2.1.5-3+b1 [263 kB] Get: 249 http://deb.debian.org/debian unstable/main armhf libjpeg-dev armhf 1:2.1.5-3+b1 [72.2 kB] Get: 250 http://deb.debian.org/debian unstable/main armhf libhdf5-mpich-dev armhf 1.10.10+repack-4 [2696 kB] Get: 251 http://deb.debian.org/debian unstable/main armhf libhdf5-mpi-dev armhf 1.10.10+repack-4 [15.6 kB] Get: 252 http://deb.debian.org/debian unstable/main armhf libsuperlu-dev armhf 7.0.0+dfsg1-2 [21.9 kB] Get: 253 http://deb.debian.org/debian unstable/main armhf libsuperlu-dist-dev armhf 8.2.1+dfsg1-5 [806 kB] Get: 254 http://deb.debian.org/debian unstable/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 255 http://deb.debian.org/debian unstable/main armhf x11proto-dev all 2024.1-1 [603 kB] Get: 256 http://deb.debian.org/debian unstable/main armhf libxau-dev armhf 1:1.0.11-1 [23.0 kB] Get: 257 http://deb.debian.org/debian unstable/main armhf libxdmcp-dev armhf 1:1.1.5-1 [42.9 kB] Get: 258 http://deb.debian.org/debian unstable/main armhf xtrans-dev all 1.4.0-1 [98.7 kB] Get: 259 http://deb.debian.org/debian unstable/main armhf libxcb1-dev armhf 1.17.0-2+b1 [180 kB] Get: 260 http://deb.debian.org/debian unstable/main armhf libx11-dev armhf 2:1.8.10-2 [825 kB] Get: 261 http://deb.debian.org/debian unstable/main armhf libyaml-dev armhf 0.2.5-1+b2 [56.8 kB] Get: 262 http://deb.debian.org/debian unstable/main armhf libpetsc3.21-dev-common all 3.21.6+dfsg1-2 [309 kB] Get: 263 http://deb.debian.org/debian unstable/main armhf libhypre-dev armhf 2.31.0-3 [1553 kB] Get: 264 http://deb.debian.org/debian unstable/main armhf libmumps-headers-dev all 5.7.3-3 [36.3 kB] Get: 265 http://deb.debian.org/debian unstable/main armhf libmumps-dev armhf 5.7.3-3 [1649 kB] Get: 266 http://deb.debian.org/debian unstable/main armhf valgrind armhf 1:3.20.0-2.1 [7522 kB] Get: 267 http://deb.debian.org/debian unstable/main armhf valgrind-mpi armhf 1:3.20.0-2.1 [119 kB] Get: 268 http://deb.debian.org/debian unstable/main armhf libpetsc-real3.21-dev armhf 3.21.6+dfsg1-2 [6614 kB] Get: 269 http://deb.debian.org/debian unstable/main armhf libparpack2-dev armhf 3.9.1-1.1+b1 [96.1 kB] Get: 270 http://deb.debian.org/debian unstable/main armhf libslepc-real3.21-dev armhf 3.21.2+dfsg1-2 [5654 kB] Get: 271 http://deb.debian.org/debian unstable/main armhf libdolfinx-real-dev armhf 1:0.9.0-3 [48.3 kB] Get: 272 http://deb.debian.org/debian unstable/main armhf libpugixml-dev armhf 1.14-2 [101 kB] Get: 273 http://deb.debian.org/debian unstable/main armhf libfmt-dev armhf 10.1.1+ds1-4 [177 kB] Get: 274 http://deb.debian.org/debian unstable/main armhf libspdlog-dev armhf 1:1.12.0+ds-2+b3 [85.5 kB] Get: 275 http://deb.debian.org/debian unstable/main armhf libxml2-dev armhf 2.12.7+dfsg+really2.9.14-0.2+b1 [723 kB] Get: 276 http://deb.debian.org/debian unstable/main armhf python3-cffi-backend armhf 1.17.1-2+b1 [83.7 kB] Get: 277 http://deb.debian.org/debian unstable/main armhf python3-ply all 3.11-7 [62.6 kB] Get: 278 http://deb.debian.org/debian unstable/main armhf python3-pycparser all 2.22-2 [78.0 kB] Get: 279 http://deb.debian.org/debian unstable/main armhf python3-cffi all 1.17.1-2 [89.4 kB] Get: 280 http://deb.debian.org/debian unstable/main armhf libpython3.12t64 armhf 3.12.7-3 [1848 kB] Get: 281 http://deb.debian.org/debian unstable/main armhf libexpat1-dev armhf 2.6.4-1 [140 kB] Get: 282 http://deb.debian.org/debian unstable/main armhf libpython3.12-dev armhf 3.12.7-3 [3808 kB] Get: 283 http://deb.debian.org/debian unstable/main armhf libpython3-dev armhf 3.12.7-1 [9976 B] Get: 284 http://deb.debian.org/debian unstable/main armhf python3.12-dev armhf 3.12.7-3 [505 kB] Get: 285 http://deb.debian.org/debian unstable/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 286 http://deb.debian.org/debian unstable/main armhf libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 287 http://deb.debian.org/debian unstable/main armhf python3-dev armhf 3.12.7-1 [26.1 kB] Get: 288 http://deb.debian.org/debian unstable/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Get: 289 http://deb.debian.org/debian unstable/main armhf python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 290 http://deb.debian.org/debian unstable/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 291 http://deb.debian.org/debian unstable/main armhf python3-typeguard all 4.4.1-1 [37.0 kB] Get: 292 http://deb.debian.org/debian unstable/main armhf python3-inflect all 7.3.1-2 [32.4 kB] Get: 293 http://deb.debian.org/debian unstable/main armhf python3-jaraco.context all 6.0.0-1 [7984 B] Get: 294 http://deb.debian.org/debian unstable/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 295 http://deb.debian.org/debian unstable/main armhf python3-pkg-resources all 75.2.0-1 [213 kB] Get: 296 http://deb.debian.org/debian unstable/main armhf python3-numpy armhf 1:1.26.4+ds-12 [3676 kB] Get: 297 http://deb.debian.org/debian unstable/main armhf python3-ufl all 2024.2.0-2 [150 kB] Get: 298 http://deb.debian.org/debian unstable/main armhf python3-basix armhf 0.9.0-2+b1 [121 kB] Get: 299 http://deb.debian.org/debian unstable/main armhf python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 300 http://deb.debian.org/debian unstable/main armhf python3-zipp all 3.21.0-1 [10.6 kB] Get: 301 http://deb.debian.org/debian unstable/main armhf python3-setuptools all 75.2.0-1 [731 kB] Get: 302 http://deb.debian.org/debian unstable/main armhf python3-ffcx all 1:0.9.0-2 [94.9 kB] Get: 303 http://deb.debian.org/debian unstable/main armhf libdolfinx-dev armhf 1:0.9.0-3 [201 kB] Fetched 183 MB in 3s (58.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19686 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.7-3) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.4-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_armhf.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:armhf (3.12.7-3) ... Setting up libexpat1:armhf (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20006 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_armhf.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../04-libkrb5support0_1.21.3-3_armhf.deb ... Unpacking libkrb5support0:armhf (1.21.3-3) ... Selecting previously unselected package libcom-err2:armhf. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_armhf.deb ... Unpacking libcom-err2:armhf (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../06-libk5crypto3_1.21.3-3_armhf.deb ... Unpacking libk5crypto3:armhf (1.21.3-3) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../07-libkeyutils1_1.6.3-4_armhf.deb ... Unpacking libkeyutils1:armhf (1.6.3-4) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../08-libkrb5-3_1.21.3-3_armhf.deb ... Unpacking libkrb5-3:armhf (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:armhf. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:armhf. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_armhf.deb ... Unpacking libnsl2:armhf (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../14-libreadline8t64_8.2-5_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:armhf. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_armhf.deb ... Unpacking libpython3.12-stdlib:armhf (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_armhf.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21068 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.7-1_armhf.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package libproc2-0:armhf. Preparing to unpack .../001-libproc2-0_2%3a4.0.4-6_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../002-procps_2%3a4.0.4-6_armhf.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../005-libmagic1t64_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-3+b1_armhf.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.22.5-2_armhf.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../008-libuchardet0_0.0.8-1+b2_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-5_armhf.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.40.2-11_armhf.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../011-libpipeline1_1.5.8-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.13.0-1_armhf.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../013-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../014-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../015-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../016-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../017-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libcatch2-dev. Preparing to unpack .../018-libcatch2-dev_3.7.1-0.4_armhf.deb ... Unpacking libcatch2-dev (3.7.1-0.4) ... Selecting previously unselected package catch2. Preparing to unpack .../019-catch2_3.7.1-0.4_all.deb ... Unpacking catch2 (3.7.1-0.4) ... Selecting previously unselected package cmake-data. 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Setting up libboost-math1.83.0:armhf (1.83.0-3.2+b1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libboost-mpi1.83.0 (1.83.0-3.2+b1) ... Setting up valgrind (1:3.20.0-2.1) ... Setting up libtasn1-6-dev:armhf (4.19.0-3+b3) ... Setting up libcatch2-dev (3.7.1-0.4) ... Setting up valgrind-mpi (1:3.20.0-2.1) ... Setting up readline-common (8.2-5) ... Setting up libicu-dev:armhf (72.1-5+b1) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libbrotli-dev:armhf (1.1.0-2+b6) ... Setting up libfmt10:armhf (10.1.1+ds1-4) ... Setting up libp11-kit-dev:armhf (0.25.5-2+b1) ... Setting up libblas-dev:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up libsz2:armhf (1.1.3-1+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:armhf (14.2.0-8) ... Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up catch2 (3.7.1-0.4) ... Setting up libptscotch-7.0:armhf (7.0.5-1) ... Setting up liblapack3:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up gettext (0.22.5-2) ... Setting up libarpack2t64:armhf (3.9.1-1.1+b1) ... Setting up libgmp-dev:armhf (2:6.3.0+dfsg-2+b2) ... Setting up libamd3:armhf (1:7.8.3+dfsg-2) ... Setting up libxau-dev:armhf (1:1.0.11-1) ... Setting up libboost-chrono1.83-dev:armhf (1.83.0-3.2+b1) ... Setting up libspdlog1.12:armhf (1:1.12.0+ds-2+b3) ... Setting up nettle-dev:armhf (3.10-1+b1) ... Setting up libyaml-dev:armhf (0.2.5-1+b2) ... Setting up libboost-math1.83-dev:armhf (1.83.0-3.2+b1) ... Setting up libtool (2.4.7-8) ... Setting up libcolamd3:armhf (1:7.8.3+dfsg-2) ... Setting up libspex3:armhf (1:7.8.3+dfsg-2) ... Setting up libboost-chrono-dev:armhf (1.83.0.2+b2) ... Setting up libfftw3-bin (3.3.10-2) ... Setting up libsuitesparse-mongoose3:armhf (1:7.8.3+dfsg-2) ... Setting up libevent-pthreads-2.1-7t64:armhf (2.1.12-stable-10+b1) ... Setting up libboost-math-dev:armhf (1.83.0.2+b2) ... Setting up libpugixml-dev:armhf (1.14-2) ... Setting up hwloc-nox (2.11.2-1) ... Setting up libaec-dev:armhf (1.1.3-1+b1) ... Setting up libcxsparse4:armhf (1:7.8.3+dfsg-2) ... Setting up libboost-serialization1.83-dev:armhf (1.83.0-3.2+b1) ... Setting up libjpeg-dev:armhf (1:2.1.5-3+b1) ... Setting up libxext6:armhf (2:1.3.4-1+b2) ... Setting up libcombblas2.0.0t64:armhf (2.0.0-6) ... Setting up libfftw3-mpi3:armhf (3.3.10-2) ... Setting up libboost-filesystem1.83-dev:armhf (1.83.0-3.2+b1) ... Setting up libldap-2.5-0:armhf (2.5.18+dfsg-3+b1) ... Setting up libcamd3:armhf (1:7.8.3+dfsg-2) ... Setting up libsuperlu7:armhf (7.0.0+dfsg1-2) ... Setting up pkgconf:armhf (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:armhf (2.0.18-1+b1) ... Setting up libnl-route-3-200:armhf (3.7.0-0.3+b1) ... Setting up libxnvctrl0:armhf (535.171.04-1+b1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:armhf (2.4.7-8) ... Setting up libxdmcp-dev:armhf (1:1.1.5-1) ... Setting up libxml2-dev:armhf (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libboost-timer1.83-dev:armhf (1.83.0-3.2+b1) ... Setting up librbio4:armhf (1:7.8.3+dfsg-2) ... Setting up libboost-date-time1.83-dev:armhf (1.83.0-3.2+b1) ... Setting up libldap-dev:armhf (2.5.18+dfsg-3+b1) ... Setting up opencl-clhpp-headers (3.0~2024.05.08-1) ... Setting up liblapack-dev:armhf (3.12.0-3+b1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... Setting up libfmt-dev:armhf (10.1.1+ds1-4) ... Setting up libboost-regex1.83-dev:armhf (1.83.0-3.2+b1) ... Setting up libboost-serialization-dev:armhf (1.83.0.2+b2) ... Setting up libssh2-1-dev:armhf (1.11.1-1) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up ocl-icd-opencl-dev:armhf (2.3.2-1+b2) ... Setting up libccolamd3:armhf (1:7.8.3+dfsg-2) ... Setting up libreadline8t64:armhf (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libbasix0.9:armhf (0.9.0-2+b1) ... Setting up groff-base (1.23.0-5) ... Setting up libhwloc-dev:armhf (2.11.2-1) ... Setting up libsuperlu-dev:armhf (7.0.0+dfsg1-2) ... Setting up libbasix-dev:armhf (0.9.0-2+b1) ... Setting up libarchive13t64:armhf (3.7.4-1.1) ... Setting up libfftw3-dev:armhf (3.3.10-2) ... Setting up libboost-timer-dev:armhf (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:armhf (1.83.0.2+b2) ... Setting up gfortran-14-arm-linux-gnueabihf (14.2.0-8) ... Setting up libboost-thread1.83-dev:armhf (1.83.0-3.2+b1) ... Setting up libgnutls28-dev:armhf (3.8.8-2) ... Setting up libnghttp2-dev:armhf (1.64.0-1) ... Setting up libibverbs1:armhf (52.0-2+b1) ... Setting up libcholmod5:armhf (1:7.8.3+dfsg-2) ... Setting up libarpack2-dev:armhf (3.9.1-1.1+b1) ... Setting up libxcb1-dev:armhf (1.17.0-2+b1) ... Setting up libcurl4t64:armhf (8.11.0-1) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.3+b1) ... Setting up libspqr4:armhf (1:7.8.3+dfsg-2) ... Setting up libsuperlu-dist8:armhf (8.2.1+dfsg1-5) ... Setting up mpich (4.2.0-14) ... update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode Setting up libboost-iostreams1.83-dev:armhf (1.83.0-3.2+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libfftw3-mpi-dev:armhf (3.3.10-2) ... Setting up mpi-default-bin (1.17) ... Setting up libx11-dev:armhf (2:1.8.10-2) ... Setting up libscalapack-mpich2.2:armhf (2.2.1-5) ... Setting up libboost-iostreams-dev:armhf (1.83.0.2+b2) ... Setting up libhwloc-plugins:armhf (2.11.2-1) ... Setting up libspdlog-dev:armhf (1:1.12.0+ds-2+b3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran-arm-linux-gnueabihf (4:14.2.0-1) ... Setting up libmumps-5.7:armhf (5.7.3-3) ... Setting up libhdf5-mpich-103-1t64:armhf (1.10.10+repack-4) ... Setting up libklu2:armhf (1:7.8.3+dfsg-2) ... Setting up libgssrpc4t64:armhf (1.21.3-3) ... Setting up libhypre-2.31.0:armhf (2.31.0-3) ... Setting up librtmp-dev:armhf (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libscalapack-mpich-dev:armhf (2.2.1-5) ... Setting up libumfpack6:armhf (1:7.8.3+dfsg-2) ... Setting up libnsl2:armhf (1.3.0-3+b3) ... Setting up cmake (3.31.0-1) ... Setting up librdmacm1t64:armhf (52.0-2+b1) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libhdf5-mpich-hl-100t64:armhf (1.10.10+repack-4) ... Setting up libboost-thread-dev:armhf (1.83.0.2+b2) ... Setting up libkadm5clnt-mit12:armhf (1.21.3-3) ... Setting up libfabric1:armhf (1.17.0-3.1) ... Setting up libpython3.12-stdlib:armhf (3.12.7-3) ... Setting up libkdb5-10t64:armhf (1.21.3-3) ... Setting up python3.12 (3.12.7-3) ... Setting up libhdf5-mpich-fortran-102t64:armhf (1.10.10+repack-4) ... Setting up libpetsc-real3.21:armhf (3.21.6+dfsg1-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/libpetsc_real.so.3.21.6 to provide /usr/lib/arm-linux-gnueabihf/libpetsc.so.3.21 (libpetsc.so.3.21) in auto mode Setting up debhelper (13.20) ... Setting up libparu1:armhf (1:7.8.3+dfsg-2) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libhdf5-mpich-cpp-103-1t64:armhf (1.10.10+repack-4) ... Setting up libsuperlu-dist-dev:armhf (8.2.1+dfsg1-5) ... Setting up libpython3.12t64:armhf (3.12.7-3) ... Setting up libhdf5-mpich-hl-cpp-100t64:armhf (1.10.10+repack-4) ... Setting up libmpich-dev:armhf (4.2.0-14) ... update-alternatives: using /usr/include/arm-linux-gnueabihf/mpich to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode Setting up libopenmpi3t64:armhf (4.1.6-13.3) ... Setting up libhdf5-mpich-hl-fortran-100t64:armhf (1.10.10+repack-4) ... Setting up libparpack2t64:armhf (3.9.1-1.1+b1) ... Setting up mpi-default-dev (1.17) ... Setting up libkadm5srv-mit12:armhf (1.21.3-3) ... Setting up libscalapack-mpi-dev:armhf (2.2.1-5) ... Setting up libpython3-stdlib:armhf (3.12.7-1) ... Setting up krb5-multidev:armhf (1.21.3-3) ... Setting up libslepc-real3.21 (3.21.2+dfsg1-2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/libslepc_real.so.3.21.2 to provide /usr/lib/arm-linux-gnueabihf/libslepc.so.3.21 (libslepc.so.3.21) in auto mode Setting up libdolfinx-real0.9:armhf (1:0.9.0-3) ... Setting up libmumps-dev:armhf (5.7.3-3) ... Setting up libscotch-dev (7.0.5-1) ... Setting up libsuitesparse-dev:armhf (1:7.8.3+dfsg-2) ... Setting up libparpack2-dev:armhf (3.9.1-1.1+b1) ... Setting up python3 (3.12.7-1) ... /usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.21/lib/petsc/bin/petsc_tas_analysis.py:779: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:253: SyntaxWarning: invalid escape sequence '\d' print("\documentclass{article}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:256: SyntaxWarning: invalid escape sequence '\c' print("\centering") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:259: SyntaxWarning: invalid escape sequence '\m' print(" & & \multicolumn{4}{c}{--------------- Percent of -------------} & \\\\") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:261: SyntaxWarning: invalid escape sequence '\h' print("\hline") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: invalid escape sequence '\e' print("\end{tabular}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: invalid escape sequence '\e' print("\end{table}") /usr/share/petsc/3.21/lib/petsc/bin/petsclogformat.py:323: SyntaxWarning: invalid escape sequence '\e' print("\end{document}") Setting up libpython3.12-dev:armhf (3.12.7-3) ... Setting up python3-zipp (3.21.0-1) ... Setting up libhypre-dev:armhf (2.31.0-3) ... Setting up python3-autocommand (2.2.2-3) ... Setting up libptscotch-dev (7.0.5-1) ... Setting up libboost-mpi1.83-dev (1.83.0-3.2+b1) ... Setting up libkrb5-dev:armhf (1.21.3-3) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libcurl4-openssl-dev:armhf (8.11.0-1) ... Setting up python3.12-dev (3.12.7-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-cffi-backend:armhf (1.17.1-2+b1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up libpython3-dev:armhf (3.12.7-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-ply (3.11-7) ... Setting up python3-typeguard (4.4.1-1) ... Setting up libhdf5-mpich-dev (1.10.10+repack-4) ... update-alternatives: using /usr/bin/h5pcc.mpich to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-mpich.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.mpich because link group mpi has changed slave links update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-mpi.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-pycparser (2.22-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.12.7-1) ... Setting up libhdf5-mpi-dev (1.10.10+repack-4) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-cffi (1.17.1-2) ... Setting up libpetsc3.21-dev-common (3.21.6+dfsg1-2) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up libpetsc-real3.21-dev:armhf (3.21.6+dfsg1-2) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/libpetsc_real.so.3.21.6 to provide /usr/lib/arm-linux-gnueabihf/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real to provide /usr/lib/petscdir/3.21 (petsc3.21) in auto mode Setting up python3-ufl (2024.2.0-2) ... Setting up libslepc-real3.21-dev (3.21.2+dfsg1-2) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/libslepc_real.so.3.21.2 to provide /usr/lib/arm-linux-gnueabihf/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real to provide /usr/lib/slepcdir/3.21 (slepc3.21) in auto mode Setting up libdolfinx-real-dev:armhf (1:0.9.0-3) ... Setting up python3-basix (0.9.0-2+b1) ... Setting up python3-ffcx (1:0.9.0-2) ... Setting up libdolfinx-dev:armhf (1:0.9.0-3) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.9.0-2_source.changes dpkg-buildpackage: info: source package fenicsx-performance-tests dpkg-buildpackage: info: source version 0.9.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Francesco Ballarin dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem=cmake --sourcedirectory=src dh_auto_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_clean -O--buildsystem=cmake -O--sourcedirectory=src debian/rules binary dh binary --buildsystem=cmake --sourcedirectory=src dh_update_autotools_config -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf -O--buildsystem=cmake -O--sourcedirectory=src debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' dh_auto_configure -- -D CMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -D CMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF ../src -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/arm-linux-gnueabihf/mpich/lib/libmpich.so (found version "4.1") -- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/mpich/lib/libmpichcxx.so (found version "4.1") -- Found MPI: TRUE (found version "4.1") -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found Boost 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0 -- Requested configuration: REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Checking for Basix hints with /usr/bin/python3 -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/mpich/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libcrypto.so;/usr/lib/arm-linux-gnueabihf/libcurl.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.a;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/mpich -- HDF5_LIBRARIES: /usr/lib/arm-linux-gnueabihf/hdf5/mpich/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libcrypto.so;/usr/lib/arm-linux-gnueabihf/libcurl.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.a;/usr/lib/arm-linux-gnueabihf/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/mpich -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/arm-linux-gnueabihf/hdf5/mpich/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libcrypto.so;/usr/lib/arm-linux-gnueabihf/libcurl.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.a;/usr/lib/arm-linux-gnueabihf/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' CMake Warning (dev) at CMakeLists.txt:52 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0 -- Requested configuration: QUIET REQUIRED COMPONENTS program_options -- Found boost_program_options 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/boost_program_options-1.83.0 -- [x] libboost_program_options.so.1.83.0 -- [ ] libboost_program_options.a -- Adding boost_program_options dependencies: headers -- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70") found components: program_options -- -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -- Configuring done (6.8s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' dh_auto_build -O--buildsystem=cmake -O--sourcedirectory=src cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' [ 9%] Generating Poisson.c [ 18%] Generating Elasticity.c ffcx /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/Poisson.py ffcx /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/Elasticity.py cd /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenicsx-performance-tests-0.9.0/src /build/reproducible-path/fenicsx-performance-tests-0.9.0/src 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-DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o.d -o 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-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.cpp [ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/main.cpp In file included from /usr/include/c++/14/vector:72, from /usr/include/c++/14/chrono:47, from /usr/include/spdlog/common.h:10, from /usr/include/spdlog/spdlog.h:12, from /usr/include/dolfinx/common/log.h:9, from /usr/include/dolfinx/common/MPI.h:10, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/mesh.cpp:6: /usr/include/c++/14/bits/vector.tcc: In function 'constexpr void std::vector<_Tp, _Alloc>::_M_range_insert(iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = const long long int*; _Tp = long long int; _Alloc = std::allocator]': /usr/include/c++/14/bits/vector.tcc:954:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 954 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/mesh/generation.h:11, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/mesh.cpp:15: /usr/include/dolfinx/mesh/utils.h: In function 'void dolfinx::mesh::impl::reorder_list(std::span<_Type, 4294967295>, std::span) [with T = long long int]': /usr/include/dolfinx/mesh/utils.h:46:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 46 | void reorder_list(std::span list, std::span nodemap) | ^~~~~~~~~~~~ In file included from /usr/include/dolfinx/mesh/Mesh.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/mesh.cpp:12: /usr/include/dolfinx/mesh/Geometry.h: In function 'dolfinx::mesh::Geometry::type> dolfinx::mesh::create_geometry(const Topology&, const dolfinx::fem::CoordinateElement::type>&, std::span, std::span, const U&, int, std::function(const dolfinx::graph::AdjacencyList&)>) [with U = std::vector >]': /usr/include/dolfinx/mesh/Geometry.h:382:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 382 | create_geometry( | ^~~~~~~~~~~~~~~ /usr/include/dolfinx/mesh/Geometry.h:382:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/Geometry.h:425:44: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 425 | graph::build::compute_local_to_global(xdofs, dofmaps.front()), nodes); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/mesh/Geometry.h:424:35: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 424 | const std::vector l2l = graph::build::compute_local_to_local( | ^~~ /usr/include/dolfinx/mesh/Geometry.h:424:35: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/Geometry.h:424:35: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/c++/14/chrono:48: /usr/include/c++/14/bits/stl_algo.h: In function 'constexpr void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter(std::ranges::less&, std::identity&):: >]': /usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1876 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/refinement/plaza.h:12, from /usr/include/dolfinx/refinement/interval.h:12, from /usr/include/dolfinx/refinement/refine.h:14, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/mesh.cpp:16: /usr/include/dolfinx/refinement/utils.h: In function 'std::tuple, std::allocator > >, std::vector >, std::array > dolfinx::refinement::create_new_vertices(MPI_Comm, const dolfinx::graph::AdjacencyList&, const dolfinx::mesh::Mesh&, std::span) [with T = double]': /usr/include/dolfinx/refinement/utils.h:253:49: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 253 | mesh.topology()->index_map(1)->global_to_local(recv_global_edge, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ 254 | recv_local_edge); | ~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/vector:66: In member function 'constexpr std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = long long int; _Alloc = std::allocator]', inlined from 'std::tuple, std::vector >, std::array, std::optional > >, std::optional > > > dolfinx::refinement::interval::compute_refinement_data(const dolfinx::mesh::Mesh&, std::optional >, dolfinx::refinement::Option) [with T = double]' at /usr/include/dolfinx/refinement/interval.h:171:27: /usr/include/c++/14/bits/stl_vector.h:1416:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1416 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1417 | std::random_access_iterator_tag()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'constexpr std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = long long int; _Alloc = std::allocator]', inlined from 'std::tuple, std::vector >, std::array, std::optional > >, std::optional > > > dolfinx::refinement::interval::compute_refinement_data(const dolfinx::mesh::Mesh&, std::optional >, dolfinx::refinement::Option) [with T = double]' at /usr/include/dolfinx/refinement/interval.h:163:27: /usr/include/c++/14/bits/stl_vector.h:1416:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1416 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1417 | std::random_access_iterator_tag()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h: In function 'constexpr void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter(std::ranges::less&, std::identity&):: >]': /usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1770 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1770:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 In file included from /usr/include/c++/14/bits/stl_algo.h:61: /usr/include/c++/14/bits/stl_heap.h: In function 'constexpr void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = int; _Tp = tuple; _Compare = __gnu_cxx::__ops::_Iter_comp_iter(std::ranges::less&, std::identity&):: >]': /usr/include/c++/14/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h: In function 'constexpr void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter(std::ranges::less&, std::identity&):: >]': /usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1876 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1876:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/14/bits/stl_algo.h:1890:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1890 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/basix/finite-element.h:12, from /usr/include/dolfinx/fem/FiniteElement.h:11, from /usr/include/dolfinx/fem/Function.h:10, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.cpp:7: /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_tranpose_matrix_right(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 285 | void apply_tranpose_matrix_right( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 243 | void apply_matrix( | ^~~~~~~~~~~~ /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/common/MPI.h: In function 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::vector >]': /usr/include/dolfinx/common/MPI.h:461:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | distribute_from_postoffice(MPI_Comm comm, std::span indices, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter(std::ranges::less&, std::identity&):: >]', inlined from 'constexpr void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Compare = ranges::__detail::__make_comp_proj(std::ranges::less&, std::identity&)::]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, inlined from 'constexpr _Iter std::ranges::__sort_fn::operator()(_Iter, _Sent, _Comp, _Proj) const [with _Iter = __gnu_cxx::__normal_iterator*, std::vector > >; _Sent = __gnu_cxx::__normal_iterator*, std::vector > >; _Comp = std::ranges::less; _Proj = std::identity]' at /usr/include/c++/14/bits/ranges_algo.h:1783:22, inlined from 'constexpr std::ranges::borrowed_iterator_t<_Range> std::ranges::__sort_fn::operator()(_Range&&, _Comp, _Proj) const [with _Range = std::vector >&; _Comp = std::ranges::less; _Proj = std::identity]' at /usr/include/c++/14/bits/ranges_algo.h:1794:16, inlined from 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::vector >]' at /usr/include/dolfinx/common/MPI.h:495:20: /usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1905 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1906 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1907 | __comp); | ~~~~~~~ In function 'constexpr void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter(std::ranges::less&, std::identity&):: >]', inlined from 'constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter(std::ranges::less&, std::identity&):: >]' at /usr/include/c++/14/bits/stl_algo.h:1908:31, inlined from 'constexpr void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >; _Compare = ranges::__detail::__make_comp_proj(std::ranges::less&, std::identity&)::]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, inlined from 'constexpr _Iter std::ranges::__sort_fn::operator()(_Iter, _Sent, _Comp, _Proj) const [with _Iter = __gnu_cxx::__normal_iterator*, std::vector > >; _Sent = __gnu_cxx::__normal_iterator*, std::vector > >; _Comp = std::ranges::less; _Proj = std::identity]' at /usr/include/c++/14/bits/ranges_algo.h:1783:22, inlined from 'constexpr std::ranges::borrowed_iterator_t<_Range> std::ranges::__sort_fn::operator()(_Range&&, _Comp, _Proj) const [with _Range = std::vector >&; _Comp = std::ranges::less; _Proj = std::identity]' at /usr/include/c++/14/bits/ranges_algo.h:1794:16, inlined from 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::vector >]' at /usr/include/dolfinx/common/MPI.h:495:20: /usr/include/c++/14/bits/stl_algo.h:1817:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1817 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1822:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1822 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ [ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o /usr/include/dolfinx/common/MPI.h: In function 'std::vector::type> dolfinx::MPI::distribute_data(MPI_Comm, std::span, MPI_Comm, const U&, int) [with U = std::vector >]': /usr/include/dolfinx/common/MPI.h:676:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 676 | distribute_data(MPI_Comm comm0, std::span indices, | ^~~~~~~~~~~~~~~ /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp /usr/include/dolfinx/mesh/utils.h: In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, MPI_Comm, const U&, std::array, const CellPartitionFunction&) [with U = std::vector >]': /usr/include/dolfinx/mesh/utils.h:783:64: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 783 | Mesh> create_mesh( | ^~~~~~~~~~~ /usr/include/dolfinx/mesh/utils.h:814:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 814 | auto t = extract_topology(element.cell_shape(), doflayout, cells); | ^ /usr/include/dolfinx/mesh/utils.h:814:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:841:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 841 | std::vector cells1_v | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:841:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In function 'constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter(std::ranges::less&, std::identity&):: >]', inlined from 'constexpr void std::sort(_RAIter, _RAIter, _Compare) [with _RAIter = __gnu_cxx::__normal_iterator >; _Compare = ranges::__detail::__make_comp_proj(std::ranges::less&, std::identity&)::]' at /usr/include/c++/14/bits/stl_algo.h:4804:18, inlined from 'constexpr _Iter std::ranges::__sort_fn::operator()(_Iter, _Sent, _Comp, _Proj) const [with _Iter = __gnu_cxx::__normal_iterator >; _Sent = __gnu_cxx::__normal_iterator >; _Comp = std::ranges::less; _Proj = std::identity]' at /usr/include/c++/14/bits/ranges_algo.h:1783:22, inlined from 'constexpr std::ranges::borrowed_iterator_t<_Range> std::ranges::__sort_fn::operator()(_Range&&, _Comp, _Proj) const [with _Range = std::vector&; _Comp = std::ranges::less; _Proj = std::identity]' at /usr/include/c++/14/bits/ranges_algo.h:1794:16, inlined from 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, MPI_Comm, const U&, std::array, const CellPartitionFunction&) [with U = std::vector >]' at /usr/include/dolfinx/mesh/utils.h:878:22: /usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1905 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1906 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1907 | __comp); | ~~~~~~~ /usr/include/c++/14/bits/stl_algo.h:1905:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h: In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, MPI_Comm, const U&, std::array, const CellPartitionFunction&) [with U = std::vector >]': /usr/include/dolfinx/mesh/utils.h:889:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 889 | Topology topology = create_topology(comm, cells1_v, original_idx1, | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:889:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:911:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 911 | Geometry geometry | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:911:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:911:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In function 'std::tuple, std::vector >, std::array, std::optional > >, std::optional > > > dolfinx::refinement::plaza::impl::compute_refinement(MPI_Comm, std::span, const dolfinx::graph::AdjacencyList&, const dolfinx::mesh::Mesh&, std::span, std::span, dolfinx::refinement::Option) [with T = double]', inlined from 'std::tuple, std::vector >, std::array, std::optional > >, std::optional > > > dolfinx::refinement::plaza::compute_refinement_data(const dolfinx::mesh::Mesh&, std::optional >, dolfinx::refinement::Option) [with T = double]' at /usr/include/dolfinx/refinement/plaza.h:533:8, inlined from 'std::tuple, std::optional > >, std::optional > > > dolfinx::refinement::refine(const dolfinx::mesh::Mesh&, std::optional >, const dolfinx::mesh::CellPartitionFunction&, Option) [with T = double]' at /usr/include/dolfinx/refinement/refine.h:68:8: /usr/include/dolfinx/refinement/plaza.h:404:26: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 404 | = get_simplices(indices, longest_edge, tdim, uniform); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/refinement/refine.h: In function 'std::tuple, std::optional > >, std::optional > > > dolfinx::refinement::refine(const dolfinx::mesh::Mesh&, std::optional >, const dolfinx::mesh::CellPartitionFunction&, Option) [with T = double]': /usr/include/dolfinx/refinement/refine.h:73:17: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 73 | mesh::Mesh mesh1 = mesh::create_mesh( | ^~~~~ /usr/include/dolfinx/refinement/refine.h:73:17: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'constexpr std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(const_iterator, std::initializer_list<_Tp>) [with _Tp = long long int; _Alloc = std::allocator]', inlined from 'dolfinx::mesh::Mesh dolfinx::mesh::impl::build_tet(MPI_Comm, MPI_Comm, std::array, 2>, std::array, const dolfinx::mesh::CellPartitionFunction&) [with T = double]' at /usr/include/dolfinx/mesh/generation.h:379:19: /usr/include/c++/14/bits/stl_vector.h:1416:24: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1416 | _M_range_insert(begin() + __offset, __l.begin(), __l.end(), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1417 | std::random_access_iterator_tag()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/mesh/generation.h: In function 'dolfinx::mesh::Mesh dolfinx::mesh::impl::build_tet(MPI_Comm, MPI_Comm, std::array, 2>, std::array, const dolfinx::mesh::CellPartitionFunction&) [with T = double]': /usr/include/dolfinx/mesh/generation.h:386:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 386 | {x.size() / 3, 3}, partitioner); | ^ /usr/include/dolfinx/mesh/generation.h:386:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.cpp:11: /usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, std::optional >, T) const [with T = double; U = double]': /usr/include/dolfinx/fem/DirichletBC.h:495:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 495 | void set(std::span x, std::optional> x0, | ^~~ In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, const U&, std::array, GhostMode) [with U = std::vector >]', inlined from 'std::shared_ptr > create_spoke_mesh(MPI_Comm, std::size_t, bool, std::size_t)' at /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/mesh.cpp:367:33: /usr/include/dolfinx/mesh/utils.h:1173:77: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1173 | return create_mesh(comm, comm, cells, elements, comm, x, xshape, nullptr); | ^ /usr/include/dolfinx/mesh/utils.h:1173:77: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:1177:59: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1177 | create_cell_partitioner(ghost_mode)); | ^ /usr/include/dolfinx/mesh/utils.h:1177:59: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/fem/Function.h:11: /usr/include/dolfinx/fem/FunctionSpace.h: In member function 'std::vector dolfinx::fem::FunctionSpace::tabulate_dof_coordinates(bool) const [with T = double]': /usr/include/dolfinx/fem/FunctionSpace.h:276:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 276 | cmap.tabulate(0, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/Function.h:12: /usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': /usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 72 | cmap.tabulate(0, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 63%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/poisson_problem.cpp In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, from /usr/include/dolfinx/fem/assembler.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.cpp:16: /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1062:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1062 | void pack_coefficients(const Form& form, IntegralType integral_type, | ^~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1305:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1305 | pack_coefficients(form, key.first, key.second, val.first, val.second); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h:1305:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = false; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1733:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1733 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1754 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1755 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1756 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1775:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1775 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1776 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1777 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1775:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1786 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1787 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1788 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_inv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:561:27, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:374:21, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1852:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1852 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1853 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:544:22, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:386:16, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1820:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1820 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1821 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tt_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:643:29, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:490:23, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1892:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1892 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1893 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:626:31, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:494:25, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1916:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1916 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1917 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = true; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1733:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1733 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1754 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1755 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1756 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1786 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1787 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1788 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1797:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1797 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1798 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1799 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1797:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:577:23, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:378:17, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1836:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1836 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1837 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:593:25, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:382:19, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1868:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1868 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1869 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tt_inv_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:660:33, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:486:27, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1964:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1964 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1965 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:609:28, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:498:22, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1940:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1940 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1941 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/CoordinateElement.h:17, from /usr/include/dolfinx/fem/FunctionSpace.h:9: /usr/include/dolfinx/common/math.h: In function 'auto dolfinx::math::det(Matrix) [with Matrix = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:87:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 87 | auto det(Matrix A) | ^~~ /usr/include/dolfinx/fem/CoordinateElement.h: In static member function 'static double dolfinx::fem::CoordinateElement::compute_jacobian_determinant(const U&, std::span) [with U = std::mdspan, std::layout_right, std::default_accessor >; T = double]': /usr/include/dolfinx/fem/CoordinateElement.h:152:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 152 | compute_jacobian_determinant(const U& J, std::span w) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:125:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 125 | void inv(U A, V B) | ^~~ /usr/include/dolfinx/common/math.h:125:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::pinv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:212:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 212 | void pinv(U A, V P) | ^~~~ /usr/include/dolfinx/common/math.h:212:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h:246:8: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 246 | inv(ATA, Inv); | ~~~^~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h: In function 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/interpolate.h:703:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 703 | void interpolate(Function& u, std::span f, | ^~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:954:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 954 | cmap.tabulate(1, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:1008:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1008 | detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In static member function 'static void dolfinx::fem::CoordinateElement::compute_jacobian_inverse(const U&, V&&) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >&; T = double]', inlined from 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]' at /usr/include/dolfinx/fem/interpolate.h:1007:38: /usr/include/dolfinx/fem/CoordinateElement.h:142:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 142 | math::pinv(J, K); | ~~~~~~~~~~^~~~~~ /usr/include/dolfinx/fem/CoordinateElement.h:142:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/Function.h:234:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 234 | fem::interpolate(*this, std::span(fx.data(), fx.size()), | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 | _fshape, cells); | ~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/assembler.h:11: /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:1147:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1147 | void assemble_vector( | ^~~~~~~~~~~~~~~ /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp: In function 'void {anonymous}::unpack_fn(std::span, std::span, std::span, std::function)': /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp:39:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 39 | void unpack_fn(std::span in, std::span idx, | ^~~~~~~~~ /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp:39:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/basix/finite-element.h:12, from /usr/include/dolfinx/fem/FiniteElement.h:11, from /usr/include/dolfinx/fem/Function.h:10, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp:7: /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 243 | void apply_matrix( | ^~~~~~~~~~~~ /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_exterior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, int, auto:188, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:189, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:190, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T, std::span) [with T = double; int _bs = -1; auto:188 = std::function; auto:189 = std::function, std::span, int, int)>; auto:190 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:263:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 263 | void _lift_bc_exterior_facets( | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_cells(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:185, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:186, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:187, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs0 = -1; int _bs1 = -1; auto:185 = std::function; auto:186 = std::function, std::span, int, int)>; auto:187 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:76:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 76 | void _lift_bc_cells( | ^~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_interior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, int, auto:191, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:192, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:193, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:191 = std::function; auto:192 = std::function, std::span, int, int)>; auto:193 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:412:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 412 | void _lift_bc_interior_facets( | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::lift_bc(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&, std::span, std::span, std::span, T) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:929:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 929 | void lift_bc(std::span b, const Form& a, mdspan2_t x_dofmap, | ^~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:929:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/assemble_vector_impl.h:1003:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1003 | _lift_bc_cells(b, x_dofmap, x, kernel, cells, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 | {dofmap0, bs0, a.domain(IntegralType::cell, i, *mesh0)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 | P0, | ~~~ 1006 | {dofmap1, bs1, a.domain(IntegralType::cell, i, *mesh1)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 | bc_values1, bc_markers1, x0, alpha); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1028:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1028 | _lift_bc_exterior_facets( | ~~~~~~~~~~~~~~~~~~~~~~~~^ 1029 | b, x_dofmap, x, num_facets_per_cell, kernel, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 | a.domain(IntegralType::exterior_facet, i), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 | {dofmap0, bs0, a.domain(IntegralType::exterior_facet, i, *mesh0)}, P0, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 | {dofmap1, bs1, a.domain(IntegralType::exterior_facet, i, *mesh1)}, P1T, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 | constants, coeffs, cstride, cell_info0, cell_info1, bc_values1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 | bc_markers1, x0, alpha, perms); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1043:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1043 | _lift_bc_interior_facets( | ~~~~~~~~~~~~~~~~~~~~~~~~^ 1044 | b, x_dofmap, x, num_facets_per_cell, kernel, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 | a.domain(IntegralType::interior_facet, i), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 | {dofmap0, bs0, a.domain(IntegralType::interior_facet, i, *mesh0)}, P0, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 | {dofmap1, bs1, a.domain(IntegralType::interior_facet, i, *mesh1)}, P1T, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 | constants, coeffs, cstride, cell_info0, cell_info1, perms, bc_values1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 | bc_markers1, x0, alpha); | ~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp:14: /usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, std::optional >, T) const [with T = double; U = double]': /usr/include/dolfinx/fem/DirichletBC.h:495:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 495 | void set(std::span x, std::optional> x0, | ^~~ In function 'void dolfinx::fem::impl::apply_lifting(std::span<_Type, 4294967295>, std::vector > >, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]', inlined from 'void dolfinx::fem::apply_lifting(std::span<_Type, 4294967295>, const std::vector > >&, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:165:25: /usr/include/dolfinx/fem/assemble_vector_impl.h:1121:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1121 | bc->set(bc_values1, std::nullopt, 1); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1126:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1126 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1127 | bc_markers1, x0[j], alpha); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1126:19: note: parameter passing for argument of type 'const std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/assemble_vector_impl.h:1131:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1131 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1132 | bc_markers1, std::span(), alpha); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1131:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/fem/Function.h:12: /usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': /usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 72 | cmap.tabulate(0, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]', inlined from 'void dolfinx::fem::assemble_vector(std::span<_Type, 4294967295>, const Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:116:24, inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > elastic::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.cpp:216:26: /usr/include/dolfinx/fem/assemble_vector_impl.h:1297:20: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1297 | assemble_vector(b, L, mesh->geometry().dofmap(), mesh->geometry().x(), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1298 | constants, coefficients); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.cpp: In function 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > elastic::problem(std::shared_ptr >, int)': /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/elasticity_problem.cpp:222:10: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 222 | bc->set(b.mutable_array(), std::nullopt); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, from /usr/include/dolfinx/fem/assembler.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp:17: /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1062:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1062 | void pack_coefficients(const Form& form, IntegralType integral_type, | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/basix/finite-element.h:12, from /usr/include/dolfinx/fem/FiniteElement.h:11, from /usr/include/dolfinx/fem/Function.h:10, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/poisson_problem.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/poisson_problem.cpp:7: /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_tranpose_matrix_right(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 285 | void apply_tranpose_matrix_right( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 243 | void apply_matrix( | ^~~~~~~~~~~~ /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1305:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1305 | pack_coefficients(form, key.first, key.second, val.first, val.second); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h:1305:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/fem/CoordinateElement.h:17, from /usr/include/dolfinx/fem/FunctionSpace.h:9, from /usr/include/dolfinx/fem/Function.h:11: /usr/include/dolfinx/common/math.h: In function 'auto dolfinx::math::det(Matrix) [with Matrix = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:87:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 87 | auto det(Matrix A) | ^~~ /usr/include/dolfinx/fem/CoordinateElement.h: In static member function 'static double dolfinx::fem::CoordinateElement::compute_jacobian_determinant(const U&, std::span) [with U = std::mdspan, std::layout_right, std::default_accessor >; T = double]': /usr/include/dolfinx/fem/CoordinateElement.h:152:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 152 | compute_jacobian_determinant(const U& J, std::span w) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:125:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 125 | void inv(U A, V B) | ^~~ /usr/include/dolfinx/common/math.h:125:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::pinv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:212:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 212 | void pinv(U A, V P) | ^~~~ /usr/include/dolfinx/common/math.h:212:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h:246:8: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 246 | inv(ATA, Inv); | ~~~^~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h: In function 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/interpolate.h:703:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 703 | void interpolate(Function& u, std::span f, | ^~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:954:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 954 | cmap.tabulate(1, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:1008:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1008 | detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In static member function 'static void dolfinx::fem::CoordinateElement::compute_jacobian_inverse(const U&, V&&) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >&; T = double]', inlined from 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]' at /usr/include/dolfinx/fem/interpolate.h:1007:38: /usr/include/dolfinx/fem/CoordinateElement.h:142:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 142 | math::pinv(J, K); | ~~~~~~~~~~^~~~~~ /usr/include/dolfinx/fem/CoordinateElement.h:142:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/Function.h:234:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 234 | fem::interpolate(*this, std::span(fx.data(), fx.size()), | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 | _fshape, cells); | ~~~~~~~~~~~~~~~ [ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/mem.cpp In file included from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/poisson_problem.cpp:12: /usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, std::optional >, T) const [with T = double; U = double]': /usr/include/dolfinx/fem/DirichletBC.h:495:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 495 | void set(std::span x, std::optional> x0, | ^~~ In file included from /usr/include/dolfinx/fem/Function.h:12: /usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': /usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 72 | cmap.tabulate(0, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/assembler.h:11: /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:1147:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1147 | void assemble_vector( | ^~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:1297:20: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1297 | assemble_vector(b, L, mesh->geometry().dofmap(), mesh->geometry().x(), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1298 | constants, coefficients); | ~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = false; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1733:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1733 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1754 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1755 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1756 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1775:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1775 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1776 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1777 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1775:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1786 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1787 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1788 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_inv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:561:27, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:374:21, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1852:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1852 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1853 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:544:22, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:386:16, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1820:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1820 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1821 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = true; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1733:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1733 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1754 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1755 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1756 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1786 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1787 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1788 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1797:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1797 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1798 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1799 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1797:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:577:23, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:378:17, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1836:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1836 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1837 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:593:25, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:382:19, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1868:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1868 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1869 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o /usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf/Elasticity.c /usr/include/dolfinx/fem/assembler.h: In function 'void dolfinx::fem::assemble_vector(std::span<_Type, 4294967295>, const Form&) [with T = double; U = double]': /usr/include/dolfinx/fem/assembler.h:124:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 124 | void assemble_vector(std::span b, const Form& L) | ^~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/la/Vector.h:14, from /usr/include/dolfinx/fem/Function.h:17: In member function 'void dolfinx::common::Scatterer::scatter_rev_end(std::span, std::span, F, BinaryOp, std::span) [with T = double; F = void (*)(std::span, std::span, std::span, std::function); BinaryOp = std::plus; Allocator = std::allocator]', inlined from 'cgpoisson::problem(std::shared_ptr >, int, std::string)::&, const dolfinx::la::Vector&)>::&, dolfinx::la::Vector&)>' at /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp:221:29: /usr/include/dolfinx/common/Scatterer.h:530:14: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 530 | unpack_fn(local_buffer, _local_inds, local_data, op); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void dolfinx::common::Scatterer::scatter_fwd_end(std::span, std::span, F, std::span) const [with T = double; F = void (*)(std::span, std::span, std::span, std::function); Allocator = std::allocator]', inlined from 'cgpoisson::problem(std::shared_ptr >, int, std::string)::&, const dolfinx::la::Vector&)>::&, dolfinx::la::Vector&)>' at /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp:227:29: /usr/include/dolfinx/common/Scatterer.h:322:14: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 322 | unpack_fn(remote_buffer, _remote_inds, remote_data, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 | [](T /*a*/, T b) { return b; }); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, from /usr/include/dolfinx/fem/assembler.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/poisson_problem.cpp:16: /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1062:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1062 | void pack_coefficients(const Form& form, IntegralType integral_type, | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp: In function 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > cgpoisson::problem(std::shared_ptr >, int, std::string)': /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp:154:10: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 154 | bc->set(un->x()->mutable_array(), std::nullopt, -1.0); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/cgpoisson_problem.cpp:154:10: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1305:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1305 | pack_coefficients(form, key.first, key.second, val.first, val.second); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h:1305:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/fem/CoordinateElement.h:17, from /usr/include/dolfinx/fem/FunctionSpace.h:9, from /usr/include/dolfinx/fem/Function.h:11: /usr/include/dolfinx/common/math.h: In function 'auto dolfinx::math::det(Matrix) [with Matrix = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:87:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 87 | auto det(Matrix A) | ^~~ /usr/include/dolfinx/fem/CoordinateElement.h: In static member function 'static double dolfinx::fem::CoordinateElement::compute_jacobian_determinant(const U&, std::span) [with U = std::mdspan, std::layout_right, std::default_accessor >; T = double]': /usr/include/dolfinx/fem/CoordinateElement.h:152:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 152 | compute_jacobian_determinant(const U& J, std::span w) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:125:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 125 | void inv(U A, V B) | ^~~ /usr/include/dolfinx/common/math.h:125:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::pinv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:212:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 212 | void pinv(U A, V P) | ^~~~ /usr/include/dolfinx/common/math.h:212:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h:246:8: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 246 | inv(ATA, Inv); | ~~~^~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h: In function 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/interpolate.h:703:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 703 | void interpolate(Function& u, std::span f, | ^~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:954:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 954 | cmap.tabulate(1, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:1008:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1008 | detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In static member function 'static void dolfinx::fem::CoordinateElement::compute_jacobian_inverse(const U&, V&&) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >&; T = double]', inlined from 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]' at /usr/include/dolfinx/fem/interpolate.h:1007:38: /usr/include/dolfinx/fem/CoordinateElement.h:142:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 142 | math::pinv(J, K); | ~~~~~~~~~~^~~~~~ /usr/include/dolfinx/fem/CoordinateElement.h:142:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/Function.h:234:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 234 | fem::interpolate(*this, std::span(fx.data(), fx.size()), | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 | _fshape, cells); | ~~~~~~~~~~~~~~~ [ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o /usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.9.0\" -DFMT_SHARED -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -DSPDLOG_COMPILED_LIB -DSPDLOG_FMT_EXTERNAL -DSPDLOG_SHARED_LIB -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf/Poisson.c In file included from /usr/include/dolfinx/fem/assembler.h:11: /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:1147:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1147 | void assemble_vector( | ^~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_exterior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, int, auto:188, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:189, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:190, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T, std::span) [with T = double; int _bs = -1; auto:188 = std::function; auto:189 = std::function, std::span, int, int)>; auto:190 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:263:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 263 | void _lift_bc_exterior_facets( | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_cells(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:185, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:186, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:187, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs0 = -1; int _bs1 = -1; auto:185 = std::function; auto:186 = std::function, std::span, int, int)>; auto:187 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:76:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 76 | void _lift_bc_cells( | ^~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_interior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, int, auto:191, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:192, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:193, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:191 = std::function; auto:192 = std::function, std::span, int, int)>; auto:193 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:412:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 412 | void _lift_bc_interior_facets( | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::lift_bc(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&, std::span, std::span, std::span, T) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:929:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 929 | void lift_bc(std::span b, const Form& a, mdspan2_t x_dofmap, | ^~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:929:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/assemble_vector_impl.h:1003:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1003 | _lift_bc_cells(b, x_dofmap, x, kernel, cells, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 | {dofmap0, bs0, a.domain(IntegralType::cell, i, *mesh0)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1005 | P0, | ~~~ 1006 | {dofmap1, bs1, a.domain(IntegralType::cell, i, *mesh1)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 | bc_values1, bc_markers1, x0, alpha); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1028:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1028 | _lift_bc_exterior_facets( | ~~~~~~~~~~~~~~~~~~~~~~~~^ 1029 | b, x_dofmap, x, num_facets_per_cell, kernel, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1030 | a.domain(IntegralType::exterior_facet, i), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1031 | {dofmap0, bs0, a.domain(IntegralType::exterior_facet, i, *mesh0)}, P0, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1032 | {dofmap1, bs1, a.domain(IntegralType::exterior_facet, i, *mesh1)}, P1T, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1033 | constants, coeffs, cstride, cell_info0, cell_info1, bc_values1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1034 | bc_markers1, x0, alpha, perms); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1043:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1043 | _lift_bc_interior_facets( | ~~~~~~~~~~~~~~~~~~~~~~~~^ 1044 | b, x_dofmap, x, num_facets_per_cell, kernel, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 | a.domain(IntegralType::interior_facet, i), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1046 | {dofmap0, bs0, a.domain(IntegralType::interior_facet, i, *mesh0)}, P0, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 | {dofmap1, bs1, a.domain(IntegralType::interior_facet, i, *mesh1)}, P1T, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 | constants, coeffs, cstride, cell_info0, cell_info1, perms, bc_values1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 | bc_markers1, x0, alpha); | ~~~~~~~~~~~~~~~~~~~~~~~ In function 'void dolfinx::fem::impl::apply_lifting(std::span<_Type, 4294967295>, std::vector > >, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]', inlined from 'void dolfinx::fem::apply_lifting(std::span<_Type, 4294967295>, const std::vector > >&, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:165:25: /usr/include/dolfinx/fem/assemble_vector_impl.h:1121:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1121 | bc->set(bc_values1, std::nullopt, 1); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1126:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1126 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1127 | bc_markers1, x0[j], alpha); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1126:19: note: parameter passing for argument of type 'const std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/assemble_vector_impl.h:1131:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1131 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1132 | bc_markers1, std::span(), alpha); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1131:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = false; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1733:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1733 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1754 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1755 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1756 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1775:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1775 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1776 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1777 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1775:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1786 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1787 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1788 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_inv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:561:27, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:374:21, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1852:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1852 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1853 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:544:22, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:386:16, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1820:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1820 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1821 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tt_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:643:29, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:490:23, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1892:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1892 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1893 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:626:31, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:494:25, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1916:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1916 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1917 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = true; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1733:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1733 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1754 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1755 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1756 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1754:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1786 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1787 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1788 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1786:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1797:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1797 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1798 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1799 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1797:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:577:23, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:378:17, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1836:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1836 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1837 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:593:25, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:382:19, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1868:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1868 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1869 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tt_inv_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:660:33, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:486:27, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1964:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1964 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1965 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:609:28, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:498:22, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t<((bool)is_invocable_r_v<_Res, _Callable, _Args ...>), _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/14/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/14/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1940:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1940 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1941 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]', inlined from 'void dolfinx::fem::assemble_vector(std::span<_Type, 4294967295>, const Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:116:24, inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > poisson::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/poisson_problem.cpp:142:26: /usr/include/dolfinx/fem/assemble_vector_impl.h:1297:20: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1297 | assemble_vector(b, L, mesh->geometry().dofmap(), mesh->geometry().x(), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1298 | constants, coefficients); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/poisson_problem.cpp: In function 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > poisson::problem(std::shared_ptr >, int)': /build/reproducible-path/fenicsx-performance-tests-0.9.0/src/poisson_problem.cpp:148:10: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 148 | bc->set(b.mutable_array(), std::nullopt); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX executable dolfinx-scaling-test /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx-scaling-test.dir/link.txt --verbose=1 /usr/bin/c++ -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -Wl,-z,relro -Wl,--dependency-file,CMakeFiles/dolfinx-scaling-test.dir/link.d "CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o" "CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o" -o dolfinx-scaling-test /usr/lib/arm-linux-gnueabihf/libdolfinx_real.so.0.9.0 /usr/lib/arm-linux-gnueabihf/libboost_program_options.so.1.83.0 -lpthread /usr/lib/arm-linux-gnueabihf/libpugixml.so.1.14 /usr/lib/arm-linux-gnueabihf/libbasix.so.0.9.0 /usr/lib/arm-linux-gnueabihf/libboost_timer.so.1.83.0 /usr/lib/arm-linux-gnueabihf/mpich/lib/libmpichcxx.so /usr/lib/arm-linux-gnueabihf/mpich/lib/libmpich.so /usr/lib/arm-linux-gnueabihf/libspdlog.so.1.12.0 /usr/lib/arm-linux-gnueabihf/libfmt.so.10.1.0 /usr/lib/arm-linux-gnueabihf/hdf5/mpich/libhdf5.so /usr/lib/slepcdir/slepc3.21/arm-linux-gnueabihf-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/lib/libpetsc_real.so make[3]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' [100%] Built target dolfinx-scaling-test make[2]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' debian/tests/run-dolfinx-scaling-test -p /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf ==== elasticity weak scaling (3 processes with ndofs=10000) ==== [2024-11-19 18:56:46.553] [RANK: 0] [info] Using partitioner with 69312 cell data [2024-11-19 18:56:46.555] [RANK: 0] [info] Compute partition of cells across ranks [2024-11-19 18:56:46.555] [RANK: 0] [info] Building mesh dual graph [2024-11-19 18:56:46.555] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-11-19 18:56:46.592] [RANK: 0] [info] Build nonlocal part of mesh dual graph [2024-11-19 18:56:46.593] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:46.593] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:46.594] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 [2024-11-19 18:56:46.595] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962) [2024-11-19 18:56:46.596] [RANK: 0] [info] Compute graph partition using PT-SCOTCH [2024-11-19 18:56:52.006] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-11-19 18:56:52.016] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-11-19 18:56:52.038] [RANK: 0] [info] Extract basic topology: 68408->68408 [2024-11-19 18:56:52.038] [RANK: 0] [info] Build local dual graph [2024-11-19 18:56:52.038] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-11-19 18:56:52.068] [RANK: 0] [info] GPS pseudo-diameter:(120) 16471-1328 [2024-11-19 18:56:52.073] [RANK: 0] [info] Create topology (single cell type) [2024-11-19 18:56:52.073] [RANK: 0] [info] Create topology (generalised) [2024-11-19 18:56:52.089] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-11-19 18:56:52.089] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-11-19 18:56:52.096] [RANK: 0] [info] Compute ghost indices [2024-11-19 18:56:52.096] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 [2024-11-19 18:56:52.097] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 [2024-11-19 18:56:52.099] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-11-19 18:56:52.099] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-11-19 18:56:52.109] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:52.109] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:52.109] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:52.109] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:52.113] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-11-19 18:56:52.113] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-11-19 18:56:52.113] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 [2024-11-19 18:56:52.114] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:52.114] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:52.114] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 [2024-11-19 18:56:52.114] [RANK: 0] [info] Checking required entities per dimension [2024-11-19 18:56:52.114] [RANK: 0] [info] Cell type: 0 dofmap: 17102x4 [2024-11-19 18:56:52.119] [RANK: 0] [info] Global index computation [2024-11-19 18:56:52.119] [RANK: 0] [info] Got 1 index_maps [2024-11-19 18:56:52.119] [RANK: 0] [info] Get global indices [2024-11-19 18:56:52.120] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:52.120] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (24x19x19) to be refined 0 times [2024-11-19 18:56:52.122] [RANK: 0] [info] Computing mesh entities of dimension 2 [2024-11-19 18:56:52.160] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:52.160] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:52.229] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:52.229] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:52.231] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-11-19 18:56:52.231] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. [2024-11-19 18:56:52.233] [RANK: 0] [info] Checking required entities per dimension [2024-11-19 18:56:52.233] [RANK: 0] [info] Cell type: 0 dofmap: 17102x4 [2024-11-19 18:56:52.237] [RANK: 0] [info] Global index computation [2024-11-19 18:56:52.237] [RANK: 0] [info] Got 1 index_maps [2024-11-19 18:56:52.238] [RANK: 0] [info] Get global indices [2024-11-19 18:56:52.238] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:52.238] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:52.239] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-11-19 18:56:52.239] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-11-19 18:56:52.239] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) [2024-11-19 18:56:52.282] [RANK: 0] [info] Column ghost size increased from 225 to 570 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 dolfinx hash: debian_1:0.9.0-3 ufl hash: 475c28073ccb3c02130118a9af65e8309bf276c3 petsc version: Petsc Release Version 3.21.6, Sep 28, 2024 Problem type: elasticity Scaling type: weak Num processes: 3 Num cells: 51984 (52 thousand) Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- [2024-11-19 18:56:52.631] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = -1. -1. -1. Threshold scaling factor for each level not specified = 1. AGG specific options Number of levels of aggressive coarsening 1 Square graph aggressive coarsening Number smoothing steps 1 Complexity: grid = 1.093 operator = 1.38036 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 3 MPI processes type: bjacobi number of blocks = 3 Local solver information for first block is in the following KSP and PC objects on rank 0: Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks KSP Object: (mg_coarse_sub_) 1 MPI process type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI process type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.17847 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=252, cols=252, bs=6 package used to perform factorization: petsc total: nonzeros=57528, allocated nonzeros=57528 using I-node routines: found 67 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=252, cols=252, bs=6 total: nonzeros=48816, allocated nonzeros=48816 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 82 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=252, cols=252, bs=6 total: nonzeros=48816, allocated nonzeros=48816 total number of mallocs used during MatSetValues calls=0 using I-node (on process 0) routines: found 82 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.264903, max 2.91393 eigenvalues provided (min 0.0363342, max 2.64903) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=2538, cols=2538, bs=6 total: nonzeros=427212, allocated nonzeros=427212 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 266 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.257906, max 2.83696 eigenvalues provided (min 0.0684725, max 2.57906) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3371 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3371 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 5.570000 5.570000 Build dofmap data | 2 0.010000 0.020000 Build sparsity | 1 0.010000 0.010000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.110000 0.110000 Compute graph partition (SCOTCH) | 1 5.410000 5.410000 Compute local part of mesh dual graph (mixed) | 2 0.040000 0.080000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.000000 0.000000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute fixed-degree adjacency list to destination ranks | 1 0.050000 0.050000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 2 0.005000 0.010000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 Init MPI | 1 0.060000 0.060000 Init PETSc | 1 0.000000 0.000000 Init dofmap from element dofmap | 2 0.010000 0.020000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 1.150000 1.150000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 5.400000 5.400000 SparsityPattern::finalize | 1 0.010000 0.010000 Topology: create | 1 0.040000 0.040000 Topology: determine shared index ownership | 1 0.010000 0.010000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 ZZZ Assemble matrix | 1 0.320000 0.320000 ZZZ Assemble vector | 1 0.010000 0.010000 ZZZ Create Mesh | 1 5.580000 5.580000 ZZZ Create RHS function | 1 0.020000 0.020000 ZZZ Create boundary conditions | 1 0.000000 0.000000 ZZZ Create facets and facet->cell connectivity | 1 0.110000 0.110000 ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.010000 0.010000 ZZZ FunctionSpace | 1 0.010000 0.010000 ZZZ Solve | 1 1.160000 1.160000 *** Number of Krylov iterations: 18 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt32z with 3 processes, by pbuilder1 on Tue Nov 19 18:56:53 2024 Using Petsc Release Version 3.21.6, Sep 28, 2024 Max Max/Min Avg Total Time (sec): 7.233e+00 1.000 7.233e+00 Objects: 0.000e+00 0.000 0.000e+00 Flops: 2.165e+08 1.068 2.082e+08 6.245e+08 Flops/sec: 2.993e+07 1.068 2.878e+07 8.635e+07 MPI Msg Count: 7.960e+02 1.040 7.757e+02 2.327e+03 MPI Msg Len (bytes): 7.646e+06 1.447 8.246e+03 1.919e+07 MPI Reductions: 4.760e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 7.2328e+00 100.0% 6.2453e+08 100.0% 2.327e+03 100.0% 8.246e+03 100.0% 4.580e+02 96.2% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 111 1.0 1.1846e-01 7.1 0.00e+00 0.0 1.9e+02 4.0e+00 1.1e+02 1 0 8 0 23 1 0 8 0 24 0 BuildTwoSidedF 84 1.0 1.1815e-01 6.3 0.00e+00 0.0 1.1e+02 5.0e+04 8.4e+01 1 0 5 30 18 1 0 5 30 18 0 MatMult 190 1.0 1.9770e-01 1.1 1.15e+08 1.1 1.1e+03 5.9e+03 0.0e+00 3 53 49 35 0 3 53 49 35 0 1671 MatMultAdd 38 1.0 1.4975e-02 1.1 9.44e+06 1.1 1.5e+02 1.7e+03 0.0e+00 0 4 7 1 0 0 4 7 1 0 1830 MatMultTranspose 38 1.0 3.3316e-02 1.1 9.45e+06 1.1 1.5e+02 1.7e+03 0.0e+00 0 4 7 1 0 0 4 7 1 0 824 MatSolve 19 0.0 3.2367e-03 0.0 2.18e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 674 MatLUFactorSym 1 1.0 4.1083e-03 196.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 1.3751e-02 5729.7 8.42e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 612 MatScale 6 1.0 1.1749e-03 1.1 6.00e+05 1.1 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 1485 MatResidual 38 1.0 3.6669e-02 1.1 2.23e+07 1.1 2.3e+02 5.6e+03 0.0e+00 0 10 10 7 0 0 10 10 7 0 1740 MatAssemblyBegin 47 1.0 1.5859e-01 3.4 0.00e+00 0.0 1.1e+02 5.0e+04 2.4e+01 2 0 5 30 5 2 0 5 30 5 0 MatAssemblyEnd 47 1.0 9.3653e-02 1.1 9.09e+04 2.0 1.8e+02 5.0e+02 9.5e+01 1 0 8 0 20 1 0 8 0 21 2 MatGetRowIJ 1 0.0 1.2208e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 2 1.0 1.0971e-02 1.0 0.00e+00 0.0 1.4e+01 3.3e+04 3.0e+01 0 0 1 2 6 0 0 1 2 7 0 MatGetOrdering 1 0.0 2.6107e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 2.4950e-03 1.0 0.00e+00 0.0 1.2e+02 8.6e+02 3.7e+01 0 0 5 1 8 0 0 5 1 8 0 MatZeroEntries 2 1.0 1.5135e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 8.3573e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 MatAXPY 4 1.0 2.1544e-02 1.0 1.18e+05 1.0 2.4e+01 4.1e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 16 MatTranspose 9 1.0 1.5204e-02 1.2 0.00e+00 0.0 1.0e+02 1.9e+03 2.7e+01 0 0 5 1 6 0 0 5 1 6 0 MatMatMultSym 6 1.0 9.6959e-02 1.0 0.00e+00 0.0 6.0e+01 1.1e+04 2.0e+01 1 0 3 3 4 1 0 3 3 4 0 MatMatMultNum 2 1.0 2.9872e-02 1.0 7.05e+06 1.1 1.2e+01 3.3e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 674 MatPtAPSymbolic 2 1.0 2.5218e-01 1.0 0.00e+00 0.0 7.2e+01 5.0e+04 1.4e+01 3 0 3 19 3 3 0 3 19 3 0 MatPtAPNumeric 2 1.0 3.2377e-01 1.0 6.25e+07 1.2 4.8e+01 6.4e+04 1.2e+01 4 27 2 16 3 4 27 2 16 3 528 MatTrnMatMultSym 1 1.0 6.6873e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 MatGetLocalMat 7 1.0 4.7383e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 6 1.0 6.3847e-03 1.2 0.00e+00 0.0 8.4e+01 4.6e+04 0.0e+00 0 0 4 20 0 0 0 4 20 0 0 VecMDot 20 1.0 1.3839e-02 2.0 1.22e+06 1.1 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 259 VecTDot 38 1.0 3.4315e-03 2.3 7.71e+05 1.0 0.0e+00 0.0e+00 3.8e+01 0 0 0 0 8 0 0 0 0 8 664 VecNorm 41 1.0 6.8693e-03 4.7 6.29e+05 1.0 0.0e+00 0.0e+00 4.1e+01 0 0 0 0 9 0 0 0 0 9 270 VecScale 22 1.0 1.2100e-04 1.0 1.22e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2958 VecCopy 118 1.0 8.5889e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 134 1.0 4.5983e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 38 1.0 9.5189e-04 1.2 7.53e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2338 VecAYPX 245 1.0 3.6146e-03 1.1 2.03e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1650 VecAXPBYCZ 76 1.0 1.8534e-03 1.2 2.11e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 3336 VecMAXPY 22 1.0 8.7981e-04 1.1 1.44e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 4808 VecAssemblyBegin 61 1.0 2.9976e-03 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 13 0 VecAssemblyEnd 61 1.0 1.0735e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 174 1.0 2.9200e-03 1.1 9.64e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 969 VecScatterBegin 330 1.0 7.4582e-03 1.2 0.00e+00 0.0 1.7e+03 4.6e+03 0.0e+00 0 0 74 41 0 0 0 74 41 0 0 VecScatterEnd 330 1.0 1.8254e-02 1.6 1.25e+04 1.4 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2 VecNormalize 22 1.0 1.1214e-03 1.4 3.66e+05 1.1 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 957 SFSetGraph 27 1.0 2.7947e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 27 1.0 1.9984e-03 1.1 0.00e+00 0.0 2.7e+02 4.9e+02 2.7e+01 0 0 11 1 6 0 0 11 1 6 0 SFBcastBegin 9 1.0 1.7711e-04 1.1 0.00e+00 0.0 5.4e+01 1.5e+03 0.0e+00 0 0 2 0 0 0 0 2 0 0 0 SFBcastEnd 9 1.0 8.1153e-05 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 3 1.0 8.8236e-05 1.2 0.00e+00 0.0 1.5e+01 6.6e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 SFReduceEnd 3 1.0 4.5677e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 342 1.0 2.0229e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 342 1.0 5.8490e-04 1.2 1.25e+04 1.4 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 54 KSPSetUp 7 1.0 3.6743e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 2.5892e-01 1.0 1.31e+08 1.1 1.3e+03 4.9e+03 7.6e+01 4 61 57 34 16 4 61 57 34 17 1479 KSPGMRESOrthog 20 1.0 1.4885e-02 1.9 2.44e+06 1.1 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 481 PCSetUp_GAMG+ 1 1.0 8.8362e-01 1.0 8.50e+07 1.2 9.4e+02 1.2e+04 3.3e+02 12 38 40 60 69 12 38 40 60 72 267 PCGAMGCreateG 2 1.0 5.6188e-02 1.0 1.55e+05 1.0 1.4e+02 1.6e+03 5.0e+01 1 0 6 1 11 1 0 6 1 11 8 GAMG Coarsen 4 1.0 7.2623e-02 1.0 0.00e+00 0.0 1.9e+02 8.1e+03 5.4e+01 1 0 8 8 11 1 0 8 8 12 0 GAMG MIS/Agg 2 1.0 6.9783e-02 1.0 0.00e+00 0.0 1.6e+02 8.7e+03 5.0e+01 1 0 7 7 11 1 0 7 7 11 0 PCGAMGProl 2 1.0 3.3024e-02 1.0 0.00e+00 0.0 2.6e+02 3.1e+03 7.6e+01 0 0 11 4 16 0 0 11 4 17 0 GAMG Prol-col 2 1.0 9.6950e-03 1.0 0.00e+00 0.0 2.2e+02 2.6e+03 5.6e+01 0 0 10 3 12 0 0 10 3 12 0 GAMG Prol-lift 2 1.0 2.2798e-02 1.0 0.00e+00 0.0 3.6e+01 6.2e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 PCGAMGOptProl 2 1.0 1.3224e-01 1.0 2.24e+07 1.1 1.9e+02 8.9e+03 6.6e+01 2 10 8 9 14 2 10 8 9 14 487 GAMG smooth 2 1.0 9.0612e-02 1.0 7.62e+06 1.1 7.2e+01 1.4e+04 2.4e+01 1 3 3 5 5 1 3 3 5 5 240 PCGAMGCreateL 2 1.0 5.8770e-01 1.0 6.25e+07 1.2 1.5e+02 4.8e+04 8.1e+01 8 27 6 37 17 8 27 6 37 18 291 GAMG PtAP 2 1.0 5.7567e-01 1.0 6.25e+07 1.2 1.2e+02 5.6e+04 2.6e+01 8 27 5 35 5 8 27 5 35 6 297 GAMG Reduce 1 1.0 1.2120e-02 1.0 0.00e+00 0.0 2.9e+01 1.7e+04 5.5e+01 0 0 1 3 12 0 0 1 3 12 0 PCGAMG Squ l00 1 1.0 6.6877e-02 1.0 0.00e+00 0.0 4.2e+01 3.1e+04 1.3e+01 1 0 2 7 3 1 0 2 7 3 0 PCGAMG Gal l00 1 1.0 3.9778e-01 1.0 3.88e+07 1.0 6.0e+01 7.9e+04 1.3e+01 5 18 3 25 3 5 18 3 25 3 290 PCGAMG Opt l00 1 1.0 6.2838e-02 1.0 5.10e+06 1.0 3.6e+01 2.2e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 239 PCGAMG Gal l01 1 1.0 1.7789e-01 1.0 2.38e+07 1.8 6.0e+01 3.2e+04 1.3e+01 2 9 3 10 3 2 9 3 10 3 311 PCGAMG Opt l01 1 1.0 1.6278e-02 1.0 1.95e+06 1.3 3.6e+01 6.8e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 315 PCSetUp 2 1.0 9.0190e-01 1.0 8.50e+07 1.1 9.4e+02 1.2e+04 3.3e+02 12 39 40 60 69 12 39 40 60 72 271 PCSetUpOnBlocks 19 1.0 1.8352e-02 72.0 8.42e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 459 PCApply 19 1.0 2.2966e-01 1.0 1.14e+08 1.1 1.2e+03 4.6e+03 1.9e+01 3 53 52 29 4 3 53 52 29 4 1445 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 11 11 Matrix 86 86 Matrix Coarsen 2 2 Matrix Null Space 1 1 Index Set 66 66 IS L to G Mapping 5 5 Vector 183 183 Star Forest Graph 35 35 Krylov Solver 7 7 Preconditioner 7 7 Viewer 2 2 PetscRandom 2 2 Distributed Mesh 4 4 Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== Average time to get PetscTime(): 9.2e-08 Average time for MPI_Barrier(): 4.9598e-06 Average time for zero size MPI_Send(): 4.05333e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=arm-linux-gnueabihf --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/arm-linux-gnueabihf/hdf5/mpich -lhdf5 -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real --PETSC_ARCH=arm-linux-gnueabihf-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-10-20 10:17:39 on reproducible Machine characteristics: Linux-6.1.0-26-arm64-armv8l-with-glibc2.40 Using PETSc directory: /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/lib -L/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/lib -lpetsc_real -L/usr/lib/arm-linux-gnueabihf/hdf5/mpich -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -L/usr/lib/gcc/arm-linux-gnueabihf/14 -L/usr/lib/arm-linux-gnueabihf -L/lib/arm-linux-gnueabihf -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 4 unused database options. They are: Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: weak source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line ==== elasticity strong scaling (3 processes with ndofs=30000) ==== [2024-11-19 18:56:54.001] [RANK: 0] [info] Using partitioner with 69312 cell data [2024-11-19 18:56:54.003] [RANK: 0] [info] Compute partition of cells across ranks [2024-11-19 18:56:54.003] [RANK: 0] [info] Building mesh dual graph [2024-11-19 18:56:54.003] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-11-19 18:56:54.042] [RANK: 0] [info] Build nonlocal part of mesh dual graph [2024-11-19 18:56:54.043] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:54.043] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:54.043] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 [2024-11-19 18:56:54.045] [RANK: 0] [info] Graph edges (local: 66332, non-local: 962) [2024-11-19 18:56:54.045] [RANK: 0] [info] Compute graph partition using PT-SCOTCH [2024-11-19 18:56:59.462] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-11-19 18:56:59.476] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-11-19 18:56:59.517] [RANK: 0] [info] Extract basic topology: 68336->68336 [2024-11-19 18:56:59.517] [RANK: 0] [info] Build local dual graph [2024-11-19 18:56:59.517] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-11-19 18:56:59.574] [RANK: 0] [info] GPS pseudo-diameter:(120) 1250-16527 [2024-11-19 18:56:59.583] [RANK: 0] [info] Create topology (single cell type) [2024-11-19 18:56:59.583] [RANK: 0] [info] Create topology (generalised) [2024-11-19 18:56:59.591] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-11-19 18:56:59.596] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-11-19 18:56:59.603] [RANK: 0] [info] Compute ghost indices [2024-11-19 18:56:59.603] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 [2024-11-19 18:56:59.603] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 [2024-11-19 18:56:59.605] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-11-19 18:56:59.606] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-11-19 18:56:59.613] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:59.614] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:59.614] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:59.614] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:59.619] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-11-19 18:56:59.619] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-11-19 18:56:59.619] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 [2024-11-19 18:56:59.619] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:59.619] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:59.619] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 [2024-11-19 18:56:59.620] [RANK: 0] [info] Checking required entities per dimension [2024-11-19 18:56:59.620] [RANK: 0] [info] Cell type: 0 dofmap: 17084x4 [2024-11-19 18:56:59.624] [RANK: 0] [info] Global index computation [2024-11-19 18:56:59.625] [RANK: 0] [info] Got 1 index_maps [2024-11-19 18:56:59.625] [RANK: 0] [info] Get global indices [2024-11-19 18:56:59.625] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:59.625] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (24x19x19) to be refined 0 times [2024-11-19 18:56:59.627] [RANK: 0] [info] Computing mesh entities of dimension 2 [2024-11-19 18:56:59.664] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:59.668] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:59.738] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:59.738] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:59.739] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-11-19 18:56:59.739] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. [2024-11-19 18:56:59.741] [RANK: 0] [info] Checking required entities per dimension [2024-11-19 18:56:59.741] [RANK: 0] [info] Cell type: 0 dofmap: 17084x4 [2024-11-19 18:56:59.746] [RANK: 0] [info] Global index computation [2024-11-19 18:56:59.746] [RANK: 0] [info] Got 1 index_maps [2024-11-19 18:56:59.746] [RANK: 0] [info] Get global indices [2024-11-19 18:56:59.747] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:56:59.747] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:56:59.747] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-11-19 18:56:59.748] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-11-19 18:56:59.748] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) [2024-11-19 18:56:59.822] [RANK: 0] [info] Column ghost size increased from 215 to 555 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 dolfinx hash: debian_1:0.9.0-3 ufl hash: 475c28073ccb3c02130118a9af65e8309bf276c3 petsc version: Petsc Release Version 3.21.6, Sep 28, 2024 Problem type: elasticity Scaling type: strong Num processes: 3 Num cells: 51984 (52 thousand) Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- [2024-11-19 18:57:00.306] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = -1. -1. -1. Threshold scaling factor for each level not specified = 1. AGG specific options Number of levels of aggressive coarsening 1 Square graph aggressive coarsening Number smoothing steps 1 Complexity: grid = 1.0978 operator = 1.41137 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 3 MPI processes type: bjacobi number of blocks = 3 Local solver information for first block is in the following KSP and PC objects on rank 0: Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks KSP Object: (mg_coarse_sub_) 1 MPI process type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI process type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.15921 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=264, cols=264, bs=6 package used to perform factorization: petsc total: nonzeros=63432, allocated nonzeros=63432 using I-node routines: found 63 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=264, cols=264, bs=6 total: nonzeros=54720, allocated nonzeros=54720 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 86 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=264, cols=264, bs=6 total: nonzeros=54720, allocated nonzeros=54720 total number of mallocs used during MatSetValues calls=0 using I-node (on process 0) routines: found 86 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.274167, max 3.01584 eigenvalues provided (min 0.0374422, max 2.74167) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=2670, cols=2670, bs=6 total: nonzeros=460116, allocated nonzeros=460116 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 280 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.258414, max 2.84255 eigenvalues provided (min 0.0770223, max 2.58414) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3354 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3354 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 5.620000 5.620000 Build dofmap data | 2 0.000000 0.000000 Build sparsity | 1 0.010000 0.010000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.120000 0.120000 Compute graph partition (SCOTCH) | 1 5.420000 5.420000 Compute local part of mesh dual graph (mixed) | 2 0.050000 0.100000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.000000 0.000000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute fixed-degree adjacency list to destination ranks | 1 0.070000 0.070000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 2 0.000000 0.000000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 Init MPI | 1 0.060000 0.060000 Init PETSc | 1 0.010000 0.010000 Init dofmap from element dofmap | 2 0.000000 0.000000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 2.160000 2.160000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 5.420000 5.420000 SparsityPattern::finalize | 1 0.040000 0.040000 Topology: create | 1 0.080000 0.080000 Topology: determine shared index ownership | 1 0.070000 0.070000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 ZZZ Assemble matrix | 1 0.410000 0.410000 ZZZ Assemble vector | 1 0.020000 0.020000 ZZZ Create Mesh | 1 5.630000 5.630000 ZZZ Create RHS function | 1 0.030000 0.030000 ZZZ Create boundary conditions | 1 0.010000 0.010000 ZZZ Create facets and facet->cell connectivity | 1 0.120000 0.120000 ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.030000 0.030000 ZZZ FunctionSpace | 1 0.000000 0.000000 ZZZ Solve | 1 2.160000 2.160000 *** Number of Krylov iterations: 18 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt32z with 3 processes, by pbuilder1 on Tue Nov 19 18:57:02 2024 Using Petsc Release Version 3.21.6, Sep 28, 2024 Max Max/Min Avg Total Time (sec): 8.475e+00 1.000 8.475e+00 Objects: 0.000e+00 0.000 0.000e+00 Flops: 2.278e+08 1.112 2.173e+08 6.520e+08 Flops/sec: 2.688e+07 1.112 2.564e+07 7.693e+07 MPI Msg Count: 7.960e+02 1.043 7.750e+02 2.325e+03 MPI Msg Len (bytes): 7.730e+06 1.389 8.377e+03 1.948e+07 MPI Reductions: 4.770e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 8.4747e+00 100.0% 6.5197e+08 100.0% 2.325e+03 100.0% 8.377e+03 100.0% 4.590e+02 96.2% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 111 1.0 2.4954e-01 1.7 0.00e+00 0.0 1.9e+02 4.0e+00 1.1e+02 3 0 8 0 23 3 0 8 0 24 0 BuildTwoSidedF 84 1.0 2.0968e-01 2.1 0.00e+00 0.0 1.1e+02 5.5e+04 8.4e+01 2 0 5 30 18 2 0 5 30 18 0 MatMult 190 1.0 3.8985e-01 1.2 1.19e+08 1.1 1.1e+03 5.7e+03 0.0e+00 4 52 49 34 0 4 52 49 34 0 862 MatMultAdd 38 1.0 5.6270e-02 1.2 9.73e+06 1.1 1.5e+02 1.7e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 505 MatMultTranspose 38 1.0 1.1006e-01 1.3 9.74e+06 1.1 1.5e+02 1.7e+03 0.0e+00 1 4 7 1 0 1 4 7 1 0 258 MatSolve 19 0.0 3.2135e-03 0.0 2.41e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 749 MatLUFactorSym 1 1.0 4.5922e-03 197.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 1.4744e-02 6042.7 1.00e+07 0.0 0.0e+00 0.0e+00 0.0e+00 0 2 0 0 0 0 2 0 0 0 679 MatScale 6 1.0 1.3971e-03 1.3 6.16e+05 1.1 1.2e+01 1.6e+03 0.0e+00 0 0 1 0 0 0 0 1 0 0 1287 MatResidual 38 1.0 7.5959e-02 1.4 2.31e+07 1.1 2.3e+02 5.5e+03 0.0e+00 1 10 10 6 0 1 10 10 6 0 856 MatAssemblyBegin 47 1.0 2.5115e-01 1.8 0.00e+00 0.0 1.1e+02 5.5e+04 2.4e+01 2 0 5 30 5 2 0 5 30 5 0 MatAssemblyEnd 47 1.0 2.3099e-01 1.1 1.16e+05 1.9 1.8e+02 4.9e+02 9.5e+01 3 0 8 0 20 3 0 8 0 21 1 MatGetRowIJ 1 0.0 1.3460e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 2 1.0 2.4179e-02 1.0 0.00e+00 0.0 1.4e+01 3.1e+04 3.0e+01 0 0 1 2 6 0 0 1 2 7 0 MatGetOrdering 1 0.0 2.9563e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 2.5836e-03 1.0 0.00e+00 0.0 1.2e+02 8.1e+02 3.8e+01 0 0 5 1 8 0 0 5 1 8 0 MatZeroEntries 2 1.0 3.0023e-04 2.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 8.9169e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 MatAXPY 4 1.0 2.2112e-02 1.0 1.18e+05 1.0 2.4e+01 4.0e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 16 MatTranspose 9 1.0 7.9718e-02 1.0 0.00e+00 0.0 1.0e+02 1.9e+03 2.7e+01 1 0 5 1 6 1 0 5 1 6 0 MatMatMultSym 6 1.0 1.5288e-01 1.3 0.00e+00 0.0 6.0e+01 1.1e+04 2.0e+01 2 0 3 3 4 2 0 3 3 4 0 MatMatMultNum 2 1.0 4.0923e-02 1.0 7.29e+06 1.1 1.2e+01 3.3e+04 2.0e+00 0 3 1 2 0 0 3 1 2 0 502 MatPtAPSymbolic 2 1.0 4.6285e-01 1.0 0.00e+00 0.0 7.2e+01 5.4e+04 1.4e+01 5 0 3 20 3 5 0 3 20 3 0 MatPtAPNumeric 2 1.0 5.0768e-01 1.0 6.97e+07 1.2 4.8e+01 7.1e+04 1.2e+01 6 29 2 17 3 6 29 2 17 3 371 MatTrnMatMultSym 1 1.0 5.9227e-02 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 1.3e+01 1 0 2 6 3 1 0 2 6 3 0 MatGetLocalMat 7 1.0 4.3813e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 6 1.0 1.0069e-02 1.1 0.00e+00 0.0 8.4e+01 4.8e+04 0.0e+00 0 0 4 21 0 0 0 4 21 0 0 VecMDot 20 1.0 2.3546e-02 2.1 1.21e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 153 VecTDot 38 1.0 8.6802e-02 1.7 7.65e+05 1.0 0.0e+00 0.0e+00 3.8e+01 1 0 0 0 8 1 0 0 0 8 26 VecNorm 41 1.0 4.9579e-02 1.3 6.22e+05 1.0 0.0e+00 0.0e+00 4.1e+01 0 0 0 0 9 0 0 0 0 9 37 VecScale 22 1.0 1.2368e-04 1.0 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2906 VecCopy 118 1.0 8.3333e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 134 1.0 4.0691e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 38 1.0 1.0122e-03 1.3 7.46e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2199 VecAYPX 245 1.0 3.4142e-03 1.1 2.01e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1753 VecAXPBYCZ 76 1.0 1.6164e-03 1.1 2.09e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 3840 VecMAXPY 22 1.0 7.9753e-04 1.1 1.43e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 5325 VecAssemblyBegin 61 1.0 5.7072e-03 2.8 0.00e+00 0.0 0.0e+00 0.0e+00 6.0e+01 0 0 0 0 13 0 0 0 0 13 0 VecAssemblyEnd 61 1.0 1.0543e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 174 1.0 2.8453e-03 1.1 9.56e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 999 VecScatterBegin 330 1.0 7.5569e-03 1.1 0.00e+00 0.0 1.7e+03 4.5e+03 0.0e+00 0 0 74 40 0 0 0 74 40 0 0 VecScatterEnd 330 1.0 2.6470e-01 1.5 1.35e+04 1.9 0.0e+00 0.0e+00 0.0e+00 3 0 0 0 0 3 0 0 0 0 0 VecNormalize 22 1.0 4.9822e-03 4.6 3.63e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 5 0 0 0 0 5 216 SFSetGraph 27 1.0 2.6235e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 27 1.0 6.5420e-02 1.3 0.00e+00 0.0 2.7e+02 4.8e+02 2.7e+01 1 0 11 1 6 1 0 11 1 6 0 SFBcastBegin 10 1.0 1.8487e-04 1.1 0.00e+00 0.0 6.0e+01 1.4e+03 0.0e+00 0 0 3 0 0 0 0 3 0 0 0 SFBcastEnd 10 1.0 8.5555e-05 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 3 1.0 7.3276e-05 1.6 0.00e+00 0.0 1.5e+01 6.4e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 SFReduceEnd 3 1.0 1.5923e-02 746.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 343 1.0 2.0098e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 343 1.0 6.2629e-04 1.5 1.35e+04 1.9 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 51 KSPSetUp 7 1.0 3.1471e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 6.5754e-01 1.0 1.35e+08 1.1 1.3e+03 4.8e+03 7.6e+01 8 60 57 33 16 8 60 57 33 17 596 KSPGMRESOrthog 20 1.0 2.4345e-02 2.1 2.42e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 295 PCSetUp_GAMG+ 1 1.0 1.4882e+00 1.0 9.30e+07 1.2 9.4e+02 1.3e+04 3.3e+02 18 39 40 61 69 18 39 40 61 72 171 PCGAMGCreateG 2 1.0 2.3690e-01 1.0 1.56e+05 1.0 1.4e+02 1.6e+03 5.0e+01 3 0 6 1 10 3 0 6 1 11 2 GAMG Coarsen 4 1.0 6.4803e-02 1.0 0.00e+00 0.0 2.0e+02 7.6e+03 5.5e+01 1 0 8 8 12 1 0 8 8 12 0 GAMG MIS/Agg 2 1.0 6.2041e-02 1.0 0.00e+00 0.0 1.6e+02 8.2e+03 5.1e+01 1 0 7 7 11 1 0 7 7 11 0 PCGAMGProl 2 1.0 3.0271e-02 1.0 0.00e+00 0.0 2.6e+02 3.1e+03 7.6e+01 0 0 11 4 16 0 0 11 4 17 0 GAMG Prol-col 2 1.0 1.2135e-02 1.0 0.00e+00 0.0 2.2e+02 2.6e+03 5.6e+01 0 0 10 3 12 0 0 10 3 12 0 GAMG Prol-lift 2 1.0 1.7575e-02 1.0 0.00e+00 0.0 3.6e+01 6.1e+03 1.2e+01 0 0 2 1 3 0 0 2 1 3 0 PCGAMGOptProl 2 1.0 1.6957e-01 1.0 2.31e+07 1.1 1.9e+02 8.8e+03 6.6e+01 2 10 8 9 14 2 10 8 9 14 386 GAMG smooth 2 1.0 1.1820e-01 1.0 7.87e+06 1.1 7.2e+01 1.4e+04 2.4e+01 1 3 3 5 5 1 3 3 5 5 188 PCGAMGCreateL 2 1.0 9.8537e-01 1.0 6.97e+07 1.2 1.5e+02 5.2e+04 8.1e+01 12 29 6 40 17 12 29 6 40 18 191 GAMG PtAP 2 1.0 9.5963e-01 1.0 6.97e+07 1.2 1.2e+02 6.0e+04 2.6e+01 11 29 5 37 5 11 29 5 37 6 196 GAMG Reduce 1 1.0 2.9519e-02 1.2 0.00e+00 0.0 2.9e+01 1.6e+04 5.5e+01 0 0 1 2 12 0 0 1 2 12 0 PCGAMG Squ l00 1 1.0 5.9230e-02 1.0 0.00e+00 0.0 4.2e+01 3.0e+04 1.3e+01 1 0 2 6 3 1 0 2 6 3 0 PCGAMG Gal l00 1 1.0 6.0895e-01 1.0 4.02e+07 1.0 6.0e+01 8.0e+04 1.3e+01 7 18 3 25 3 7 18 3 25 3 195 PCGAMG Opt l00 1 1.0 6.9428e-02 1.0 5.07e+06 1.0 3.6e+01 2.1e+04 1.1e+01 1 2 2 4 2 1 2 2 4 2 216 PCGAMG Gal l01 1 1.0 3.5110e-01 1.0 2.95e+07 1.6 6.0e+01 4.1e+04 1.3e+01 4 11 3 13 3 4 11 3 13 3 199 PCGAMG Opt l01 1 1.0 3.7888e-02 1.0 2.22e+06 1.4 3.6e+01 7.0e+03 1.1e+01 0 1 2 1 2 0 1 2 1 2 146 PCSetUp 2 1.0 1.5079e+00 1.0 9.30e+07 1.2 9.4e+02 1.3e+04 3.3e+02 18 41 40 61 69 18 41 40 61 72 175 PCSetUpOnBlocks 19 1.0 1.9973e-02 73.2 1.00e+07 0.0 0.0e+00 0.0e+00 0.0e+00 0 2 0 0 0 0 2 0 0 0 501 PCApply 19 1.0 5.0822e-01 1.0 1.18e+08 1.1 1.2e+03 4.5e+03 1.9e+01 6 52 52 28 4 6 52 52 28 4 670 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 11 11 Matrix 86 86 Matrix Coarsen 2 2 Matrix Null Space 1 1 Index Set 66 66 IS L to G Mapping 5 5 Vector 183 183 Star Forest Graph 35 35 Krylov Solver 7 7 Preconditioner 7 7 Viewer 2 2 PetscRandom 2 2 Distributed Mesh 4 4 Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== Average time to get PetscTime(): 9.2e-08 Average time for MPI_Barrier(): 4.6878e-06 Average time for zero size MPI_Send(): 4.413e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=arm-linux-gnueabihf --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/arm-linux-gnueabihf/hdf5/mpich -lhdf5 -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real --PETSC_ARCH=arm-linux-gnueabihf-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-10-20 10:17:39 on reproducible Machine characteristics: Linux-6.1.0-26-arm64-armv8l-with-glibc2.40 Using PETSc directory: /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/lib -L/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/lib -lpetsc_real -L/usr/lib/arm-linux-gnueabihf/hdf5/mpich -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -L/usr/lib/gcc/arm-linux-gnueabihf/14 -L/usr/lib/arm-linux-gnueabihf -L/lib/arm-linux-gnueabihf -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 4 unused database options. They are: Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: strong source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line ==== poisson weak scaling (3 processes with ndofs=10000) ==== [2024-11-19 18:57:02.890] [RANK: 0] [info] Using partitioner with 216000 cell data [2024-11-19 18:57:02.895] [RANK: 0] [info] Compute partition of cells across ranks [2024-11-19 18:57:02.895] [RANK: 0] [info] Building mesh dual graph [2024-11-19 18:57:02.895] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-11-19 18:57:03.011] [RANK: 0] [info] Build nonlocal part of mesh dual graph [2024-11-19 18:57:03.120] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:03.120] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:03.120] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 [2024-11-19 18:57:03.125] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800) [2024-11-19 18:57:03.125] [RANK: 0] [info] Compute graph partition using PT-SCOTCH [2024-11-19 18:57:12.023] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-11-19 18:57:12.044] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-11-19 18:57:12.106] [RANK: 0] [info] Extract basic topology: 212896->212896 [2024-11-19 18:57:12.106] [RANK: 0] [info] Build local dual graph [2024-11-19 18:57:12.106] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-11-19 18:57:12.216] [RANK: 0] [info] GPS pseudo-diameter:(165) 1788-51746 [2024-11-19 18:57:12.231] [RANK: 0] [info] Create topology (single cell type) [2024-11-19 18:57:12.231] [RANK: 0] [info] Create topology (generalised) [2024-11-19 18:57:12.448] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-11-19 18:57:12.468] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-11-19 18:57:12.556] [RANK: 0] [info] Compute ghost indices [2024-11-19 18:57:12.556] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 [2024-11-19 18:57:12.556] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 [2024-11-19 18:57:12.561] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-11-19 18:57:12.571] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-11-19 18:57:12.605] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:12.648] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:12.656] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:12.688] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:12.752] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-11-19 18:57:12.768] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-11-19 18:57:12.768] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 [2024-11-19 18:57:12.785] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:12.816] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:12.816] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 [2024-11-19 18:57:12.829] [RANK: 0] [info] Checking required entities per dimension [2024-11-19 18:57:12.829] [RANK: 0] [info] Cell type: 0 dofmap: 53224x4 [2024-11-19 18:57:12.855] [RANK: 0] [info] Global index computation [2024-11-19 18:57:12.855] [RANK: 0] [info] Got 1 index_maps [2024-11-19 18:57:12.856] [RANK: 0] [info] Get global indices [2024-11-19 18:57:12.857] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:12.857] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times [2024-11-19 18:57:12.863] [RANK: 0] [info] Computing mesh entities of dimension 2 [2024-11-19 18:57:12.981] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:13.077] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:13.255] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:13.255] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:13.260] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-11-19 18:57:13.260] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. [2024-11-19 18:57:13.265] [RANK: 0] [info] Checking required entities per dimension [2024-11-19 18:57:13.265] [RANK: 0] [info] Cell type: 0 dofmap: 53224x4 [2024-11-19 18:57:13.279] [RANK: 0] [info] Global index computation [2024-11-19 18:57:13.279] [RANK: 0] [info] Got 1 index_maps [2024-11-19 18:57:13.280] [RANK: 0] [info] Get global indices [2024-11-19 18:57:13.282] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:13.282] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:13.283] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-11-19 18:57:13.284] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-11-19 18:57:13.284] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) [2024-11-19 18:57:13.333] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-11-19 18:57:13.333] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) [2024-11-19 18:57:13.463] [RANK: 0] [info] Column ghost size increased from 482 to 1290 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 dolfinx hash: debian_1:0.9.0-3 ufl hash: 475c28073ccb3c02130118a9af65e8309bf276c3 petsc version: Petsc Release Version 3.21.6, Sep 28, 2024 Problem type: poisson Scaling type: weak Num processes: 3 Num cells: 162000 (162 thousand) Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- [2024-11-19 18:57:13.738] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Maximum size of coarsest grid 9 Minimum size of coarsest grid 1 Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical SpGEMM type hypre linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=29791, cols=29791 total: nonzeros=424171, allocated nonzeros=424171 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 9.980000 9.980000 Build dofmap data | 2 0.025000 0.050000 Build sparsity | 1 0.040000 0.040000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.005000 0.010000 Compute entities of dim = 2 | 1 0.400000 0.400000 Compute graph partition (SCOTCH) | 1 8.900000 8.900000 Compute local part of mesh dual graph (mixed) | 2 0.215000 0.430000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.110000 0.110000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute fixed-degree adjacency list to destination ranks | 1 0.120000 0.120000 Distribute row-wise data (scalable) | 1 0.080000 0.080000 GPS: create_level_structure | 2 0.005000 0.020000 Gibbs-Poole-Stockmeyer ordering | 1 0.050000 0.050000 Init MPI | 1 0.170000 0.170000 Init PETSc | 1 0.010000 0.010000 Init dofmap from element dofmap | 2 0.020000 0.040000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 1.550000 1.550000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 8.900000 8.900000 SparsityPattern::finalize | 1 0.100000 0.100000 Topology: create | 1 0.490000 0.490000 Topology: determine shared index ownership | 1 0.280000 0.280000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.030000 0.030000 ZZZ Assemble | 1 0.450000 0.450000 ZZZ Assemble matrix | 1 0.180000 0.180000 ZZZ Assemble vector | 1 0.040000 0.040000 ZZZ Create Mesh | 1 9.980000 9.980000 ZZZ Create RHS function | 1 0.060000 0.060000 ZZZ Create boundary conditions | 1 0.000000 0.000000 ZZZ Create facets and facet->cell connectivity | 1 0.400000 0.400000 ZZZ FunctionSpace | 1 0.020000 0.020000 ZZZ Solve | 1 1.560000 1.560000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt32z with 3 processes, by pbuilder1 on Tue Nov 19 18:57:15 2024 Using Petsc Release Version 3.21.6, Sep 28, 2024 Max Max/Min Avg Total Time (sec): 1.241e+01 1.000 1.241e+01 Objects: 0.000e+00 0.000 0.000e+00 Flops: 3.517e+06 1.021 3.489e+06 1.047e+07 Flops/sec: 2.833e+05 1.021 2.811e+05 8.433e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 MPI Msg Len (bytes): 1.885e+05 1.179 5.939e+03 5.345e+05 MPI Reductions: 7.200e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 1.2412e+01 100.0% 1.0466e+07 100.0% 9.000e+01 100.0% 5.939e+03 100.0% 5.400e+01 75.0% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 5 1.0 6.8495e-02 343.9 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 BuildTwoSidedF 2 1.0 6.8501e-02 284.5 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatMult 7 1.0 1.4033e-02 3.6 1.93e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 408 MatConvert 1 1.0 1.1923e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 MatAssemblyBegin 5 1.0 7.1248e-02 18.2 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatAssemblyEnd 5 1.0 1.4563e-02 1.4 3.85e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 1 MatGetRowIJ 4 1.0 5.1200e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 8.0205e-03 183.6 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 MatSetPreallCOO 2 1.0 2.3791e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatSetValuesCOO 2 1.0 1.4464e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecTDot 16 1.0 2.1893e-02 1.4 3.20e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 44 VecNorm 8 1.0 2.2386e-02 2.4 1.60e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 21 VecCopy 2 1.0 3.8238e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 9 1.0 8.3198e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 14 1.0 3.3735e-04 1.3 2.80e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 2473 VecAYPX 6 1.0 1.8655e-04 1.4 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1916 VecScatterBegin 7 1.0 2.8859e-04 1.2 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 VecScatterEnd 7 1.0 9.6237e-03 32.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 7.4079e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 3.6679e-04 1.2 0.00e+00 0.0 3.6e+01 8.3e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 SFPack 7 1.0 8.1000e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 7 1.0 6.7200e-06 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSetUp 1 1.0 7.0358e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 5.9061e-01 1.0 2.81e+06 1.0 4.2e+01 5.7e+03 2.4e+01 5 80 47 45 33 5 80 47 45 44 14 PCSetUp 1 1.0 9.5900e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 8 0 0 0 3 8 0 0 0 4 0 PCApply 8 1.0 5.4291e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 4 0 0 0 0 4 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 2 2 Matrix 7 7 Index Set 6 6 IS L to G Mapping 1 1 Vector 12 12 Star Forest Graph 3 3 Krylov Solver 1 1 Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== Average time to get PetscTime(): 1e-07 Average time for MPI_Barrier(): 4.7838e-06 Average time for zero size MPI_Send(): 5.41333e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=arm-linux-gnueabihf --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/arm-linux-gnueabihf/hdf5/mpich -lhdf5 -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real --PETSC_ARCH=arm-linux-gnueabihf-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-10-20 10:17:39 on reproducible Machine characteristics: Linux-6.1.0-26-arm64-armv8l-with-glibc2.40 Using PETSc directory: /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/lib -L/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/lib -lpetsc_real -L/usr/lib/arm-linux-gnueabihf/hdf5/mpich -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -L/usr/lib/gcc/arm-linux-gnueabihf/14 -L/usr/lib/arm-linux-gnueabihf -L/lib/arm-linux-gnueabihf -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: weak source: command line ==== poisson strong scaling (3 processes with ndofs=30000) ==== [2024-11-19 18:57:15.666] [RANK: 0] [info] Using partitioner with 216000 cell data [2024-11-19 18:57:15.671] [RANK: 0] [info] Compute partition of cells across ranks [2024-11-19 18:57:15.671] [RANK: 0] [info] Building mesh dual graph [2024-11-19 18:57:15.671] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-11-19 18:57:15.799] [RANK: 0] [info] Build nonlocal part of mesh dual graph [2024-11-19 18:57:15.847] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:15.847] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:15.847] [RANK: 0] [info] Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.6666666666666666, 0.6666666666666666 [2024-11-19 18:57:15.851] [RANK: 0] [info] Graph edges (local: 210000, non-local: 1800) [2024-11-19 18:57:15.852] [RANK: 0] [info] Compute graph partition using PT-SCOTCH [2024-11-19 18:57:26.262] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-11-19 18:57:26.274] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-11-19 18:57:26.371] [RANK: 0] [info] Extract basic topology: 212772->212772 [2024-11-19 18:57:26.371] [RANK: 0] [info] Build local dual graph [2024-11-19 18:57:26.371] [RANK: 0] [info] Build local part of mesh dual graph (mixed) [2024-11-19 18:57:26.603] [RANK: 0] [info] GPS pseudo-diameter:(169) 1306-51198 [2024-11-19 18:57:26.634] [RANK: 0] [info] Create topology (single cell type) [2024-11-19 18:57:26.634] [RANK: 0] [info] Create topology (generalised) [2024-11-19 18:57:26.668] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 3 [2024-11-19 18:57:26.668] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 [2024-11-19 18:57:26.716] [RANK: 0] [info] Compute ghost indices [2024-11-19 18:57:26.716] [RANK: 0] [info] Computing communication graph edges (using PCX algorithm). Number of input edges: 0 [2024-11-19 18:57:26.716] [RANK: 0] [info] Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 [2024-11-19 18:57:26.734] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-11-19 18:57:26.734] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-11-19 18:57:26.773] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:26.796] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:26.796] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:26.796] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:26.816] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 0 [2024-11-19 18:57:26.820] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 [2024-11-19 18:57:26.820] [RANK: 0] [info] Number of neighbourhood source ranks in distribute_to_postoffice: 0 [2024-11-19 18:57:26.822] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:26.823] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:26.823] [RANK: 0] [info] Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.6666666666666666 [2024-11-19 18:57:26.824] [RANK: 0] [info] Checking required entities per dimension [2024-11-19 18:57:26.824] [RANK: 0] [info] Cell type: 0 dofmap: 53193x4 [2024-11-19 18:57:26.837] [RANK: 0] [info] Global index computation [2024-11-19 18:57:26.838] [RANK: 0] [info] Got 1 index_maps [2024-11-19 18:57:26.839] [RANK: 0] [info] Get global indices [2024-11-19 18:57:26.857] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:26.857] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times [2024-11-19 18:57:26.896] [RANK: 0] [info] Computing mesh entities of dimension 2 [2024-11-19 18:57:27.102] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:27.195] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:27.547] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:27.547] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:27.561] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-11-19 18:57:27.561] [RANK: 0] [info] Computing mesh connectivity 2-3 from transpose. [2024-11-19 18:57:27.565] [RANK: 0] [info] Checking required entities per dimension [2024-11-19 18:57:27.572] [RANK: 0] [info] Cell type: 0 dofmap: 53193x4 [2024-11-19 18:57:27.598] [RANK: 0] [info] Global index computation [2024-11-19 18:57:27.598] [RANK: 0] [info] Got 1 index_maps [2024-11-19 18:57:27.599] [RANK: 0] [info] Get global indices [2024-11-19 18:57:27.601] [RANK: 0] [info] Computing communication graph edges (using NBX algorithm). Number of input edges: 2 [2024-11-19 18:57:27.601] [RANK: 0] [info] Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 [2024-11-19 18:57:27.602] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-11-19 18:57:27.603] [RANK: 0] [info] Requesting connectivity (3, 0) - (0, 0) [2024-11-19 18:57:27.603] [RANK: 0] [info] Requesting connectivity (2, 0) - (0, 0) [2024-11-19 18:57:27.696] [RANK: 0] [info] Requesting connectivity (2, 0) - (3, 0) [2024-11-19 18:57:27.696] [RANK: 0] [info] Requesting connectivity (3, 0) - (2, 0) [2024-11-19 18:57:27.787] [RANK: 0] [info] Column ghost size increased from 480 to 1274 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.9.0 dolfinx hash: debian_1:0.9.0-3 ufl hash: 475c28073ccb3c02130118a9af65e8309bf276c3 petsc version: Petsc Release Version 3.21.6, Sep 28, 2024 Problem type: poisson Scaling type: strong Num processes: 3 Num cells: 162000 (162 thousand) Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- [2024-11-19 18:57:27.937] [RANK: 0] [info] PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Maximum size of coarsest grid 9 Minimum size of coarsest grid 1 Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical SpGEMM type hypre linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=29791, cols=29791 total: nonzeros=424171, allocated nonzeros=424171 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_MAX] Summary of timings | reps wall avg wall tot --------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 11.250000 11.250000 Build dofmap data | 2 0.040000 0.080000 Build sparsity | 1 0.050000 0.050000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.660000 0.660000 Compute graph partition (SCOTCH) | 1 10.400000 10.400000 Compute local part of mesh dual graph (mixed) | 2 0.195000 0.390000 Compute local-to-local map | 1 0.010000 0.010000 Compute non-local part of mesh dual graph | 1 0.060000 0.060000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute fixed-degree adjacency list to destination ranks | 1 0.150000 0.150000 Distribute row-wise data (scalable) | 1 0.010000 0.010000 GPS: create_level_structure | 2 0.005000 0.010000 Gibbs-Poole-Stockmeyer ordering | 1 0.030000 0.030000 Init MPI | 1 0.150000 0.150000 Init PETSc | 1 0.050000 0.050000 Init dofmap from element dofmap | 2 0.030000 0.060000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 3.830000 3.830000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.010000 0.010000 SCOTCH: call SCOTCH_dgraphPart | 1 10.390000 10.390000 SparsityPattern::finalize | 1 0.040000 0.040000 Topology: create | 1 0.170000 0.170000 Topology: determine shared index ownership | 1 0.010000 0.010000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.030000 0.030000 ZZZ Assemble | 1 0.330000 0.330000 ZZZ Assemble matrix | 1 0.120000 0.120000 ZZZ Assemble vector | 1 0.020000 0.020000 ZZZ Create Mesh | 1 11.270000 11.270000 ZZZ Create RHS function | 1 0.110000 0.110000 ZZZ Create boundary conditions | 1 0.020000 0.020000 ZZZ Create facets and facet->cell connectivity | 1 0.660000 0.660000 ZZZ FunctionSpace | 1 0.040000 0.040000 ZZZ Solve | 1 3.840000 3.840000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt32z with 3 processes, by pbuilder1 on Tue Nov 19 18:57:31 2024 Using Petsc Release Version 3.21.6, Sep 28, 2024 Max Max/Min Avg Total Time (sec): 1.614e+01 1.001 1.614e+01 Objects: 0.000e+00 0.000 0.000e+00 Flops: 3.531e+06 1.026 3.489e+06 1.047e+07 Flops/sec: 2.188e+05 1.026 2.161e+05 6.484e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 MPI Msg Len (bytes): 1.881e+05 1.189 5.918e+03 5.326e+05 MPI Reductions: 7.200e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 1.6141e+01 100.0% 1.0467e+07 100.0% 9.000e+01 100.0% 5.918e+03 100.0% 5.400e+01 75.0% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 5 1.0 6.3698e-04 3.5 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 9 0 BuildTwoSidedF 2 1.0 6.6890e-04 2.4 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatMult 7 1.0 3.6398e-02 9.6 1.93e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 157 MatConvert 1 1.0 7.6655e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 MatAssemblyBegin 5 1.0 3.8008e-03 1.1 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatAssemblyEnd 5 1.0 6.6880e-03 1.0 3.90e+03 1.3 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 9 2 MatGetRowIJ 4 1.0 5.6400e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 4.0191e-04 3.6 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 MatSetPreallCOO 2 1.0 2.6877e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatSetValuesCOO 2 1.0 1.5494e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecTDot 16 1.0 8.7486e-02 5.7 3.21e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 22 0 9 0 0 30 11 VecNorm 8 1.0 5.3378e-02 1.9 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 9 VecCopy 2 1.0 4.3558e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 9 1.0 8.8437e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 14 1.0 3.4423e-04 1.1 2.81e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 2423 VecAYPX 6 1.0 1.6191e-04 1.1 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 2208 VecScatterBegin 7 1.0 5.2170e-04 1.7 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 VecScatterEnd 7 1.0 3.1040e-02 166.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 7.0438e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 2.9815e-04 1.0 0.00e+00 0.0 3.6e+01 8.3e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 SFPack 7 1.0 8.9996e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 7 1.0 8.9600e-06 1.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSetUp 1 1.0 9.6197e-05 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 2.1263e+00 1.0 2.82e+06 1.0 4.2e+01 5.7e+03 2.4e+01 13 80 47 45 33 13 80 47 45 44 4 PCSetUp 1 1.0 1.7091e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 11 0 0 0 3 11 0 0 0 4 0 PCApply 8 1.0 2.0204e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 12 0 0 0 0 12 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 2 2 Matrix 7 7 Index Set 6 6 IS L to G Mapping 1 1 Vector 12 12 Star Forest Graph 3 3 Krylov Solver 1 1 Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== Average time to get PetscTime(): 9.2e-08 Average time for MPI_Barrier(): 1.07036e-05 Average time for zero size MPI_Send(): 4.69333e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=arm-linux-gnueabihf --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/arm-linux-gnueabihf/hdf5/mpich -lhdf5 -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real --PETSC_ARCH=arm-linux-gnueabihf-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-10-20 10:17:39 on reproducible Machine characteristics: Linux-6.1.0-26-arm64-armv8l-with-glibc2.40 Using PETSc directory: /usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.21.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/lib -L/usr/lib/petscdir/petsc3.21/arm-linux-gnueabihf-real/lib -lpetsc_real -L/usr/lib/arm-linux-gnueabihf/hdf5/mpich -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -L/usr/lib/gcc/arm-linux-gnueabihf/14 -L/usr/lib/arm-linux-gnueabihf -L/lib/arm-linux-gnueabihf -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: strong source: command line make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake -O--sourcedirectory=src dh_prep -O--buildsystem=cmake -O--sourcedirectory=src dh_auto_install -O--buildsystem=cmake -O--sourcedirectory=src cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.9.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.9.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/fenicsx-performance-tests-0.9.0/debian/tmp/usr/bin/dolfinx-scaling-test make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.9.0/obj-arm-linux-gnueabihf' dh_install -O--buildsystem=cmake -O--sourcedirectory=src dh_installdocs -O--buildsystem=cmake -O--sourcedirectory=src dh_installchangelogs -O--buildsystem=cmake -O--sourcedirectory=src dh_installman -O--buildsystem=cmake -O--sourcedirectory=src dh_installsystemduser -O--buildsystem=cmake -O--sourcedirectory=src dh_perl -O--buildsystem=cmake -O--sourcedirectory=src dh_link -O--buildsystem=cmake -O--sourcedirectory=src dh_strip_nondeterminism -O--buildsystem=cmake -O--sourcedirectory=src dh_compress -O--buildsystem=cmake -O--sourcedirectory=src dh_fixperms -O--buildsystem=cmake -O--sourcedirectory=src dh_missing -O--buildsystem=cmake -O--sourcedirectory=src dh_dwz -a -O--buildsystem=cmake -O--sourcedirectory=src dh_strip -a -O--buildsystem=cmake -O--sourcedirectory=src dh_makeshlibs -a -O--buildsystem=cmake -O--sourcedirectory=src dh_shlibdeps -a -O--buildsystem=cmake -O--sourcedirectory=src dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: debian/fenicsx-performance-tests/usr/bin/dolfinx-scaling-test contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -O--buildsystem=cmake -O--sourcedirectory=src dh_gencontrol -O--buildsystem=cmake -O--sourcedirectory=src dh_md5sums -O--buildsystem=cmake -O--sourcedirectory=src dh_builddeb -O--buildsystem=cmake -O--sourcedirectory=src dpkg-deb: building package 'fenicsx-performance-tests-dbgsym' in '../fenicsx-performance-tests-dbgsym_0.9.0-2_armhf.deb'. dpkg-deb: building package 'fenicsx-performance-tests-source' in '../fenicsx-performance-tests-source_0.9.0-2_all.deb'. dpkg-deb: building package 'fenicsx-performance-tests' in '../fenicsx-performance-tests_0.9.0-2_armhf.deb'. dpkg-genbuildinfo --build=binary -O../fenicsx-performance-tests_0.9.0-2_armhf.buildinfo dpkg-genchanges --build=binary -O../fenicsx-performance-tests_0.9.0-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/13302 and its subdirectories I: Current time: Tue Nov 19 18:58:00 -12 2024 I: pbuilder-time-stamp: 1732085880 Wed Nov 20 06:58:26 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt64a-armhf-rb.debian.net. Wed Nov 20 06:58:26 UTC 2024 I: Preparing to do remote build '2' on virt64a-armhf-rb.debian.net. Wed Nov 20 07:10:16 UTC 2024 I: Deleting $TMPDIR on virt64a-armhf-rb.debian.net. Wed Nov 20 07:10:18 UTC 2024 I: fenicsx-performance-tests_0.9.0-2_armhf.changes: Format: 1.8 Date: Wed, 06 Nov 2024 07:19:30 +0000 Source: fenicsx-performance-tests Binary: fenicsx-performance-tests fenicsx-performance-tests-dbgsym fenicsx-performance-tests-source Architecture: armhf all Version: 0.9.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Francesco Ballarin Description: fenicsx-performance-tests - Performance test codes for FEniCS/DOLFIN-X (binaries) fenicsx-performance-tests-source - Performance test codes for FEniCS/DOLFIN-X (source) Changes: fenicsx-performance-tests (0.9.0-2) unstable; urgency=medium . * Upload to unstable Checksums-Sha1: 56d7117e7df8944662ff85ed563b395883e065e1 6111968 fenicsx-performance-tests-dbgsym_0.9.0-2_armhf.deb 70201d75de6ec71f21330520c0dc9c5ada93cacf 18124 fenicsx-performance-tests-source_0.9.0-2_all.deb e286b327c321aa773ca96f0c6a9cff2aa2f55833 15037 fenicsx-performance-tests_0.9.0-2_armhf.buildinfo a7a1830b6be717ebbb1276098dd8851fc83fddc8 239360 fenicsx-performance-tests_0.9.0-2_armhf.deb Checksums-Sha256: 56e74d6dd40a9f3f8d84408cb79c3ed814a203c62dccf3703f4294dacd43f9d2 6111968 fenicsx-performance-tests-dbgsym_0.9.0-2_armhf.deb 780ddf0553809800fd57a1e069f987776c98ac93c1cf4396468f54e687751451 18124 fenicsx-performance-tests-source_0.9.0-2_all.deb 31b758b5cc7be8c72cfc56fb463840f04ba30b9b172a1bf2d810f9bea049603e 15037 fenicsx-performance-tests_0.9.0-2_armhf.buildinfo 3eddc0c7ef18b3aa738d1c38c5a8c35b31042d822f0cd13a45d4c27ab67400ad 239360 fenicsx-performance-tests_0.9.0-2_armhf.deb Files: a649a26014157bbb2d181afa2c43043b 6111968 debug optional fenicsx-performance-tests-dbgsym_0.9.0-2_armhf.deb eccf4d16cdeb02a8ba0606a6b5636d72 18124 libdevel optional fenicsx-performance-tests-source_0.9.0-2_all.deb df8f8e0a414e323152e315fe88111200 15037 libdevel optional fenicsx-performance-tests_0.9.0-2_armhf.buildinfo 7ce141b00a75de416b40fe8993f39369 239360 libdevel optional fenicsx-performance-tests_0.9.0-2_armhf.deb Wed Nov 20 07:10:19 UTC 2024 I: diffoscope 283 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_34-12487.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.MpJhjcB8/fenicsx-performance-tests_0.9.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.MpJhjcB8/fenicsx-performance-tests_0.9.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.MpJhjcB8/fenicsx-performance-tests_0.9.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.MpJhjcB8/b1/fenicsx-performance-tests_0.9.0-2_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.MpJhjcB8/b2/fenicsx-performance-tests_0.9.0-2_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.383s) 0.383s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.070s) 0.070s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 675ms CPU time consumed: 675ms Wed Nov 20 07:10:21 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Wed Nov 20 07:10:21 UTC 2024 I: fenicsx-performance-tests from unstable built successfully and reproducibly on armhf. Wed Nov 20 07:10:22 UTC 2024 I: Submitting .buildinfo files to external archives: Wed Nov 20 07:10:22 UTC 2024 I: Submitting 16K b1/fenicsx-performance-tests_0.9.0-2_armhf.buildinfo.asc Wed Nov 20 07:10:23 UTC 2024 I: Submitting 16K b2/fenicsx-performance-tests_0.9.0-2_armhf.buildinfo.asc Wed Nov 20 07:10:23 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Nov 20 07:10:23 UTC 2024 I: Done submitting .buildinfo files. Wed Nov 20 07:10:23 UTC 2024 I: Removing signed fenicsx-performance-tests_0.9.0-2_armhf.buildinfo.asc files: removed './b1/fenicsx-performance-tests_0.9.0-2_armhf.buildinfo.asc' removed './b2/fenicsx-performance-tests_0.9.0-2_armhf.buildinfo.asc'