Mon May 13 22:02:28 UTC 2024 I: starting to build fenicsx-performance-tests/unstable/armhf on jenkins on '2024-05-13 22:02' Mon May 13 22:02:28 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_2/6792/console.log Mon May 13 22:02:28 UTC 2024 I: Downloading source for unstable/fenicsx-performance-tests=0.8.0-1 --2024-05-13 22:02:28-- http://deb.debian.org/debian/pool/main/f/fenicsx-performance-tests/fenicsx-performance-tests_0.8.0-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2468 (2.4K) [text/prs.lines.tag] Saving to: ‘fenicsx-performance-tests_0.8.0-1.dsc’ 0K .. 100% 254M=0s 2024-05-13 22:02:28 (254 MB/s) - ‘fenicsx-performance-tests_0.8.0-1.dsc’ saved [2468/2468] Mon May 13 22:02:28 UTC 2024 I: fenicsx-performance-tests_0.8.0-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: fenicsx-performance-tests Binary: fenicsx-performance-tests, fenicsx-performance-tests-source Architecture: any all Version: 0.8.0-1 Maintainer: Debian Science Maintainers Uploaders: Drew Parsons , Francesco Ballarin Homepage: https://github.com/FEniCS/performance-test Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/science-team/fenics/fenicsx-performance-tests Vcs-Git: https://salsa.debian.org/science-team/fenics/fenicsx-performance-tests.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@ Build-Depends: debhelper-compat (= 13), cmake (>= 3.16~), libboost-dev (>= 1.70~), libdolfinx-dev (>= 1:0.8~), libdolfinx-real-dev, mpi-default-dev, python3-ffcx Package-List: fenicsx-performance-tests deb libdevel optional arch=any fenicsx-performance-tests-source deb libdevel optional arch=all Checksums-Sha1: be1bf1ce896b4ca9d8acc87fbd9abf39e73d80f8 19616 fenicsx-performance-tests_0.8.0.orig.tar.gz 924a1038f4e8bc13ae774c93988a7a1ec44d3305 6200 fenicsx-performance-tests_0.8.0-1.debian.tar.xz Checksums-Sha256: 64aad99dc3117d3c7e3b27b0e598367faa52b2e5486e6175b6e7a650926a14bd 19616 fenicsx-performance-tests_0.8.0.orig.tar.gz 0c6900afd28146a2a2164e41de2cfdb3855e9cb2cef9fb8f4b46cf36f32dbf2b 6200 fenicsx-performance-tests_0.8.0-1.debian.tar.xz Files: 76d9be118c6339058e05fdd5517a2a6a 19616 fenicsx-performance-tests_0.8.0.orig.tar.gz 4e4bd69bc567705ea81a42d8a2f46e31 6200 fenicsx-performance-tests_0.8.0-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEG10EseUHu/A2aeK4AfNfwz5zr4wFAmY2JSYACgkQAfNfwz5z r4zwPQ/+O3H1eOVubzK1oBkoqcELPKsT+iX3RzsvRVT2v30tvSc/VaRUFKc29Gvj 5q+FVHcrhTHX7m9nKoE8PcjC2Ov0TRmKcfAySEtRUQdQA4O+98VIrGbCUWvankqT zH9aVukI3zG17oAZryD+ozmEvNcArmVSwsuNIvuyuThjinpJZy4500bwG+VMllLv uTMELfFWKgi3nu4qtfJDCqO4Rtp+gByytLRSFTmTlqKufqmdcPYkBfTJiGZM/l6s /ldBB4hOUsPvCJYMOTEbuEhvh39mG8VwYUo/QNaVSwR04aCPncXNIUCLGPFfAamR 47ptS9sIOtXIMO/IuNw0/95UyV/7mjis9pvbz0guO0FCtJt4LIn010z9trYF/umR zFTtMtlEVdS51eL5MoHNMNY8PEyD75gPVln/0jUIng0ndiyqVORBJ78SDFMHl9Kc Ml7uNnFbggS1J2b7DN5E6Gmfo/CiQrIvQmYnkleK1LU22awVe1AHJt+zRJQ1WfDS 0IXVAmE981sGcU7M4cRu4pGjePb4E8Wr9ARov9fsNeLtuI432NGwOI+KBlz1fiGK z9puQPkP1YzMkiPXuTRYC9plzuwataR1BlLdjK6MGaoS79UlQ/vugfBDQZkMWKYE ArQ1qvbywmBcD5CiDaAPhti1HKdmPpWlBGiooOR0PbgIXNkq0Lw= =JdmW -----END PGP SIGNATURE----- Mon May 13 22:02:28 UTC 2024 I: Checking whether the package is not for us Mon May 13 22:02:28 UTC 2024 I: Starting 1st build on remote node virt32a-armhf-rb.debian.net. Mon May 13 22:02:28 UTC 2024 I: Preparing to do remote build '1' on virt32a-armhf-rb.debian.net. Mon May 13 22:24:02 UTC 2024 I: Deleting $TMPDIR on virt32a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon May 13 10:02:45 -12 2024 I: pbuilder-time-stamp: 1715637765 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [fenicsx-performance-tests_0.8.0-1.dsc] I: copying [./fenicsx-performance-tests_0.8.0.orig.tar.gz] I: copying [./fenicsx-performance-tests_0.8.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sat May 4 12:08:06 2024 gpgv: using RSA key 1B5D04B1E507BBF03669E2B801F35FC33E73AF8C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fenicsx-performance-tests_0.8.0-1.dsc: no acceptable signature found dpkg-source: info: extracting fenicsx-performance-tests in fenicsx-performance-tests-0.8.0 dpkg-source: info: unpacking fenicsx-performance-tests_0.8.0.orig.tar.gz dpkg-source: info: unpacking fenicsx-performance-tests_0.8.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying enable_complex_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/19987/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='2551b66962ca4d1bbfb0eb9ace60737f' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='19987' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YXxyNApB/pbuilderrc_rCCG --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YXxyNApB/b1 --logfile b1/build.log fenicsx-performance-tests_0.8.0-1.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32a 6.1.0-21-armmp-lpae #1 SMP Debian 6.1.90-1 (2024-05-03) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 10 07:44 /bin -> usr/bin I: user script /srv/workspace/pbuilder/19987/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake (>= 3.16~), libboost-dev (>= 1.70~), libdolfinx-dev (>= 1:0.8~), libdolfinx-real-dev, mpi-default-dev, python3-ffcx dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19445 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake (>= 3.16~); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev (>= 1.70~); however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libdolfinx-dev (>= 1:0.8~); however: Package libdolfinx-dev is not installed. pbuilder-satisfydepends-dummy depends on libdolfinx-real-dev; however: Package libdolfinx-real-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx; however: Package python3-ffcx is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-13{a} gfortran-13-arm-linux-gnueabihf{a} gfortran-arm-linux-gnueabihf{a} groff-base{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} libaec-dev{a} libaec0{a} libamd3{a} libarchive-zip-perl{a} libarchive13t64{a} libarpack2-dev{a} libarpack2t64{a} libbasix-dev{a} libbasix0.8{a} libblas-dev{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libbsd0{a} libbtf2{a} libc6-dbg{a} libcamd3{a} libcbor0.10{a} libccolamd3{a} libcholmod5{a} libcolamd3{a} libcom-err2{a} libcombblas2.0.0t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdebhelper-perl{a} libdolfinx-dev{a} libdolfinx-real-dev{a} libdolfinx-real0.8{a} libedit2{a} libeigen3-dev{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-13-dev{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-mpi-dev{a} libhdf5-openmpi-103-1t64{a} libhdf5-openmpi-cpp-103-1t64{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-102t64{a} libhdf5-openmpi-hl-100t64{a} libhdf5-openmpi-hl-cpp-100t64{a} libhdf5-openmpi-hl-fortran-100t64{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libhypre-2.28.0{a} libhypre-dev{a} libibverbs-dev{a} libibverbs1{a} libicu-dev{a} libicu72{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libklu2{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldl3{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmetis5{a} libmumps-5.6t64{a} libmumps-dev{a} libmumps-headers-dev{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3t64{a} libparpack2-dev{a} libparpack2t64{a} libparu0{a} libpciaccess0{a} libpetsc-real3.19-dev{a} libpetsc-real3.19t64{a} libpetsc3.19-dev-common{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5t64{a} libpthread-stubs0-dev{a} libptscotch-7.0{a} libptscotch-dev{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} librbio4{a} librdmacm1t64{a} libreadline8t64{a} librhash0{a} librtmp1{a} libscalapack-mpi-dev{a} libscalapack-openmpi-dev{a} libscalapack-openmpi2.2{a} libscotch-7.0{a} libscotch-dev{a} libslepc-real3.19-dev{a} libslepc-real3.19t64{a} libspex3{a} libspqr4{a} libssh2-1t64{a} libssl-dev{a} libsub-override-perl{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist8{a} libsuperlu6{a} libsz2{a} libtool{a} libuchardet0{a} libumfpack6{a} libuv1t64{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxml2{a} libxml2-dev{a} libxnvctrl0{a} libyaml-0-2{a} libyaml-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-basix{a} python3-cffi{a} python3-cffi-backend{a} python3-dev{a} python3-distutils{a} python3-ffcx{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pkg-resources{a} python3-ply{a} python3-pycparser{a} python3-setuptools{a} python3-ufl{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} valgrind{a} valgrind-mpi{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl gdb gdb-minimal javascript-common krb5-locales ksh ksh93u+m libarchive-cpio-perl libcoarrays-openmpi-dev libgl-dev libgraphblas-dev libmail-sendmail-perl libpetsc3.19-dev-examples libssl3 lynx mksh psmisc publicsuffix python3-numba wget xauth zsh 0 packages upgraded, 273 newly installed, 0 to remove and 0 not upgraded. Need to get 168 MB of archives. After unpacking 776 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf libpython3.11-minimal armhf 3.11.9-1 [805 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf python3.11-minimal armhf 3.11.9-1 [1600 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf python3-minimal armhf 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf libreadline8t64 armhf 8.2-4 [145 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf libpython3.11-stdlib armhf 3.11.9-1 [1704 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf python3.11 armhf 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf libpython3-stdlib armhf 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian unstable/main armhf python3 armhf 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf libproc2-0 armhf 2:4.0.4-4 [55.7 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf procps armhf 2:4.0.4-4 [864 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 22 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-4 [1090 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40-8 [85.6 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf libbsd0 armhf 0.12.2-1 [127 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf libedit2 armhf 3.1-20230828-1+b1 [77.6 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf libcbor0.10 armhf 0.10.2-1.2 [24.3 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf libfido2-1 armhf 1.14.0-1+b2 [70.4 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf libkrb5support0 armhf 1.20.1-6+b1 [30.6 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf libcom-err2 armhf 1.47.1~rc2-1 [21.8 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf libk5crypto3 armhf 1.20.1-6+b1 [75.5 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf libkeyutils1 armhf 1.6.3-3 [7908 B] Get: 34 http://deb.debian.org/debian unstable/main armhf libkrb5-3 armhf 1.20.1-6+b1 [290 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf libgssapi-krb5-2 armhf 1.20.1-6+b1 [112 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf openssh-client armhf 1:9.7p1-4 [870 kB] Get: 37 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf autoconf all 2.71-3 [332 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 40 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf autopoint all 0.21-14 [496 kB] Get: 42 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf libarchive13t64 armhf 3.7.2-2 [304 kB] Get: 45 http://deb.debian.org/debian unstable/main armhf libbrotli1 armhf 1.1.0-2+b3 [284 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf libnghttp2-14 armhf 1.61.0-1+b1 [64.1 kB] Get: 47 http://deb.debian.org/debian unstable/main armhf libpsl5t64 armhf 0.21.2-1.1 [55.6 kB] Get: 48 http://deb.debian.org/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b4 [53.2 kB] Get: 49 http://deb.debian.org/debian unstable/main armhf libssh2-1t64 armhf 1.11.0-4.1+b2 [198 kB] Get: 50 http://deb.debian.org/debian unstable/main armhf libcurl4t64 armhf 8.7.1-5 [391 kB] Get: 51 http://deb.debian.org/debian unstable/main armhf libjsoncpp25 armhf 1.9.5-6+b2 [69.9 kB] Get: 52 http://deb.debian.org/debian unstable/main armhf librhash0 armhf 1.4.3-3+b1 [143 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf libuv1t64 armhf 1.48.0-3 [134 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf cmake-data all 3.29.3-1 [2167 kB] Get: 55 http://deb.debian.org/debian unstable/main armhf cmake armhf 3.29.3-1+b2 [5216 kB] Get: 56 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 57 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-7 [517 kB] Get: 58 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 59 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 60 http://deb.debian.org/debian unstable/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 61 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 62 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 63 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 64 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 65 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 66 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 67 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 68 http://deb.debian.org/debian unstable/main armhf debhelper all 13.15.3 [901 kB] Get: 69 http://deb.debian.org/debian unstable/main armhf fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 70 http://deb.debian.org/debian unstable/main armhf libgfortran5 armhf 14-20240429-1 [263 kB] Get: 71 http://deb.debian.org/debian unstable/main armhf libgfortran-13-dev armhf 13.2.0-24 [306 kB] Get: 72 http://deb.debian.org/debian unstable/main armhf gfortran-13-arm-linux-gnueabihf armhf 13.2.0-24 [8200 kB] Get: 73 http://deb.debian.org/debian unstable/main armhf gfortran-13 armhf 13.2.0-24 [12.2 kB] Get: 74 http://deb.debian.org/debian unstable/main armhf gfortran-arm-linux-gnueabihf armhf 4:13.2.0-7 [1288 B] Get: 75 http://deb.debian.org/debian unstable/main armhf gfortran armhf 4:13.2.0-7 [1432 B] Get: 76 http://deb.debian.org/debian unstable/main armhf libnl-3-200 armhf 3.7.0-0.3 [51.7 kB] Get: 77 http://deb.debian.org/debian unstable/main armhf libnl-route-3-200 armhf 3.7.0-0.3 [153 kB] Get: 78 http://deb.debian.org/debian unstable/main armhf libibverbs1 armhf 50.0-2+b1 [55.0 kB] Get: 79 http://deb.debian.org/debian unstable/main armhf ibverbs-providers armhf 50.0-2+b1 [28.7 kB] Get: 80 http://deb.debian.org/debian unstable/main armhf icu-devtools armhf 72.1-4+b1 [185 kB] Get: 81 http://deb.debian.org/debian unstable/main armhf libaec0 armhf 1.1.3-1 [21.5 kB] Get: 82 http://deb.debian.org/debian unstable/main armhf libsz2 armhf 1.1.3-1 [7724 B] Get: 83 http://deb.debian.org/debian unstable/main armhf libaec-dev armhf 1.1.3-1 [18.8 kB] Get: 84 http://deb.debian.org/debian unstable/main armhf libsuitesparseconfig7 armhf 1:7.7.0+dfsg-2 [21.8 kB] Get: 85 http://deb.debian.org/debian unstable/main armhf libamd3 armhf 1:7.7.0+dfsg-2 [39.4 kB] Get: 86 http://deb.debian.org/debian unstable/main armhf libblas3 armhf 3.12.0-3 [108 kB] Get: 87 http://deb.debian.org/debian unstable/main armhf liblapack3 armhf 3.12.0-3 [1803 kB] Get: 88 http://deb.debian.org/debian unstable/main armhf libarpack2t64 armhf 3.9.1-1.1+b1 [85.0 kB] Get: 89 http://deb.debian.org/debian unstable/main armhf libblas-dev armhf 3.12.0-3 [119 kB] Get: 90 http://deb.debian.org/debian unstable/main armhf liblapack-dev armhf 3.12.0-3 [1903 kB] Get: 91 http://deb.debian.org/debian unstable/main armhf libarpack2-dev armhf 3.9.1-1.1+b1 [103 kB] Get: 92 http://deb.debian.org/debian unstable/main armhf libbasix0.8 armhf 0.8.0-1 [350 kB] Get: 93 http://deb.debian.org/debian unstable/main armhf libpkgconf3 armhf 1.8.1-1+b2 [31.9 kB] Get: 94 http://deb.debian.org/debian unstable/main armhf pkgconf-bin armhf 1.8.1-1+b2 [28.9 kB] Get: 95 http://deb.debian.org/debian unstable/main armhf pkgconf armhf 1.8.1-1+b2 [26.2 kB] Get: 96 http://deb.debian.org/debian unstable/main armhf pkg-config armhf 1.8.1-1+b2 [14.0 kB] Get: 97 http://deb.debian.org/debian unstable/main armhf libeigen3-dev all 3.4.0-4 [1041 kB] Get: 98 http://deb.debian.org/debian unstable/main armhf libbasix-dev armhf 0.8.0-1 [61.9 kB] Get: 99 http://deb.debian.org/debian unstable/main armhf libboost1.83-dev armhf 1.83.0-2.1+b1 [10.6 MB] Get: 100 http://deb.debian.org/debian unstable/main armhf libboost-atomic1.83.0 armhf 1.83.0-2.1+b1 [233 kB] Get: 101 http://deb.debian.org/debian unstable/main armhf libboost-atomic1.83-dev armhf 1.83.0-2.1+b1 [234 kB] Get: 102 http://deb.debian.org/debian unstable/main armhf libboost-chrono1.83.0t64 armhf 1.83.0-2.1+b1 [238 kB] Get: 103 http://deb.debian.org/debian unstable/main armhf libboost-chrono1.83-dev armhf 1.83.0-2.1+b1 [244 kB] Get: 104 http://deb.debian.org/debian unstable/main armhf libboost-chrono-dev armhf 1.83.0.2+b2 [4212 B] Get: 105 http://deb.debian.org/debian unstable/main armhf libboost-date-time1.83.0 armhf 1.83.0-2.1+b1 [230 kB] Get: 106 http://deb.debian.org/debian unstable/main armhf libboost-serialization1.83.0 armhf 1.83.0-2.1+b1 [315 kB] Get: 107 http://deb.debian.org/debian unstable/main armhf libboost-serialization1.83-dev armhf 1.83.0-2.1+b1 [385 kB] Get: 108 http://deb.debian.org/debian unstable/main armhf libboost-date-time1.83-dev armhf 1.83.0-2.1+b1 [239 kB] Get: 109 http://deb.debian.org/debian unstable/main armhf libboost-dev armhf 1.83.0.2+b2 [3832 B] Get: 110 http://deb.debian.org/debian unstable/main armhf libboost-filesystem1.83.0 armhf 1.83.0-2.1+b1 [270 kB] Get: 111 http://deb.debian.org/debian unstable/main armhf libboost-system1.83.0 armhf 1.83.0-2.1+b1 [230 kB] Get: 112 http://deb.debian.org/debian unstable/main armhf libboost-system1.83-dev armhf 1.83.0-2.1+b1 [231 kB] Get: 113 http://deb.debian.org/debian unstable/main armhf libboost-filesystem1.83-dev armhf 1.83.0-2.1+b1 [284 kB] Get: 114 http://deb.debian.org/debian unstable/main armhf libboost-filesystem-dev armhf 1.83.0.2+b2 [3616 B] Get: 115 http://deb.debian.org/debian unstable/main armhf libboost-regex1.83.0 armhf 1.83.0-2.1+b1 [307 kB] Get: 116 http://deb.debian.org/debian unstable/main armhf libicu-dev armhf 72.1-4+b1 [10.1 MB] Get: 117 http://deb.debian.org/debian unstable/main armhf libboost-regex1.83-dev armhf 1.83.0-2.1+b1 [335 kB] Get: 118 http://deb.debian.org/debian unstable/main armhf libboost-iostreams1.83-dev armhf 1.83.0-2.1+b1 [260 kB] Get: 119 http://deb.debian.org/debian unstable/main armhf libboost-iostreams-dev armhf 1.83.0.2+b2 [3568 B] Get: 120 http://deb.debian.org/debian unstable/main armhf libboost-math1.83.0 armhf 1.83.0-2.1+b1 [328 kB] Get: 121 http://deb.debian.org/debian unstable/main armhf libboost-math1.83-dev armhf 1.83.0-2.1+b1 [345 kB] Get: 122 http://deb.debian.org/debian unstable/main armhf libboost-math-dev armhf 1.83.0.2+b2 [3788 B] Get: 123 http://deb.debian.org/debian unstable/main armhf libevent-core-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [122 kB] Get: 124 http://deb.debian.org/debian unstable/main armhf libevent-pthreads-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [53.8 kB] Get: 125 http://deb.debian.org/debian unstable/main armhf librdmacm1t64 armhf 50.0-2+b1 [62.1 kB] Get: 126 http://deb.debian.org/debian unstable/main armhf libfabric1 armhf 1.17.0-3+b1 [386 kB] Get: 127 http://deb.debian.org/debian unstable/main armhf libhwloc15 armhf 2.10.0-1+b1 [133 kB] Get: 128 http://deb.debian.org/debian unstable/main armhf libpciaccess0 armhf 0.17-3+b1 [49.3 kB] Get: 129 http://deb.debian.org/debian unstable/main armhf libxau6 armhf 1:1.0.9-1+b1 [17.4 kB] Get: 130 http://deb.debian.org/debian unstable/main armhf libxdmcp6 armhf 1:1.1.2-3+b1 [23.0 kB] Get: 131 http://deb.debian.org/debian unstable/main armhf libxcb1 armhf 1.17.0-1 [140 kB] Get: 132 http://deb.debian.org/debian unstable/main armhf libx11-data all 2:1.8.7-1 [328 kB] Get: 133 http://deb.debian.org/debian unstable/main armhf libx11-6 armhf 2:1.8.7-1+b1 [739 kB] Get: 134 http://deb.debian.org/debian unstable/main armhf libxext6 armhf 2:1.3.4-1+b1 [47.8 kB] Get: 135 http://deb.debian.org/debian unstable/main armhf libxnvctrl0 armhf 535.171.04-1 [12.8 kB] Get: 136 http://deb.debian.org/debian unstable/main armhf ocl-icd-libopencl1 armhf 2.3.2-1+b1 [37.3 kB] Get: 137 http://deb.debian.org/debian unstable/main armhf libhwloc-plugins armhf 2.10.0-1+b1 [16.1 kB] Get: 138 http://deb.debian.org/debian unstable/main armhf libopenmpi3t64 armhf 4.1.6-13.3 [2216 kB] Get: 139 http://deb.debian.org/debian unstable/main armhf libboost-mpi1.83.0 armhf 1.83.0-2.1+b1 [264 kB] Get: 140 http://deb.debian.org/debian unstable/main armhf openmpi-common all 4.1.6-13.3 [169 kB] Get: 141 http://deb.debian.org/debian unstable/main armhf libnl-3-dev armhf 3.7.0-0.3 [94.3 kB] Get: 142 http://deb.debian.org/debian unstable/main armhf libnl-route-3-dev armhf 3.7.0-0.3 [180 kB] Get: 143 http://deb.debian.org/debian unstable/main armhf libibverbs-dev armhf 50.0-2+b1 [198 kB] Get: 144 http://deb.debian.org/debian unstable/main armhf libnuma1 armhf 2.0.18-1 [18.5 kB] Get: 145 http://deb.debian.org/debian unstable/main armhf libnuma-dev armhf 2.0.18-1 [34.2 kB] Get: 146 http://deb.debian.org/debian unstable/main armhf libltdl7 armhf 2.4.7-7+b1 [390 kB] Get: 147 http://deb.debian.org/debian unstable/main armhf libltdl-dev armhf 2.4.7-7+b1 [162 kB] Get: 148 http://deb.debian.org/debian unstable/main armhf libhwloc-dev armhf 2.10.0-1+b1 [223 kB] Get: 149 http://deb.debian.org/debian unstable/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [164 kB] Get: 150 http://deb.debian.org/debian unstable/main armhf libevent-extra-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [99.2 kB] Get: 151 http://deb.debian.org/debian unstable/main armhf libevent-openssl-2.1-7t64 armhf 2.1.12-stable-8.1+b3 [58.7 kB] Get: 152 http://deb.debian.org/debian unstable/main armhf libevent-dev armhf 2.1.12-stable-8.1+b3 [293 kB] Get: 153 http://deb.debian.org/debian unstable/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 154 http://deb.debian.org/debian unstable/main armhf libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 155 http://deb.debian.org/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1 [904 kB] Get: 156 http://deb.debian.org/debian unstable/main armhf openmpi-bin armhf 4.1.6-13.3 [195 kB] Get: 157 http://deb.debian.org/debian unstable/main armhf libopenmpi-dev armhf 4.1.6-13.3 [1020 kB] Get: 158 http://deb.debian.org/debian unstable/main armhf mpi-default-dev armhf 1.15 [3152 B] Get: 159 http://deb.debian.org/debian unstable/main armhf libboost-mpi1.83-dev armhf 1.83.0-2.1+b1 [290 kB] Get: 160 http://deb.debian.org/debian unstable/main armhf libboost-mpi-dev armhf 1.83.0.2+b2 [3668 B] Get: 161 http://deb.debian.org/debian unstable/main armhf libboost-program-options1.83.0 armhf 1.83.0-2.1+b1 [327 kB] Get: 162 http://deb.debian.org/debian unstable/main armhf libboost-program-options1.83-dev armhf 1.83.0-2.1+b1 [370 kB] Get: 163 http://deb.debian.org/debian unstable/main armhf libboost-program-options-dev armhf 1.83.0.2+b2 [3604 B] Get: 164 http://deb.debian.org/debian unstable/main armhf libboost-serialization-dev armhf 1.83.0.2+b2 [3816 B] Get: 165 http://deb.debian.org/debian unstable/main armhf libboost-thread1.83.0 armhf 1.83.0-2.1+b1 [261 kB] Get: 166 http://deb.debian.org/debian unstable/main armhf libboost-thread1.83-dev armhf 1.83.0-2.1+b1 [276 kB] Get: 167 http://deb.debian.org/debian unstable/main armhf libboost-thread-dev armhf 1.83.0.2+b2 [3612 B] Get: 168 http://deb.debian.org/debian unstable/main armhf libboost-timer1.83.0 armhf 1.83.0-2.1+b1 [234 kB] Get: 169 http://deb.debian.org/debian unstable/main armhf libboost-timer1.83-dev armhf 1.83.0-2.1+b1 [236 kB] Get: 170 http://deb.debian.org/debian unstable/main armhf libboost-timer-dev armhf 1.83.0.2+b2 [3708 B] Get: 171 http://deb.debian.org/debian unstable/main armhf libbtf2 armhf 1:7.7.0+dfsg-2 [24.2 kB] Get: 172 http://deb.debian.org/debian unstable/main armhf libc6-dbg armhf 2.38-11 [6402 kB] Get: 173 http://deb.debian.org/debian unstable/main armhf libcamd3 armhf 1:7.7.0+dfsg-2 [37.6 kB] Get: 174 http://deb.debian.org/debian unstable/main armhf libccolamd3 armhf 1:7.7.0+dfsg-2 [39.6 kB] Get: 175 http://deb.debian.org/debian unstable/main armhf libcolamd3 armhf 1:7.7.0+dfsg-2 [32.1 kB] Get: 176 http://deb.debian.org/debian unstable/main armhf libcholmod5 armhf 1:7.7.0+dfsg-2 [606 kB] Get: 177 http://deb.debian.org/debian unstable/main armhf libcombblas2.0.0t64 armhf 2.0.0-3.1+b1 [256 kB] Get: 178 http://deb.debian.org/debian unstable/main armhf libcurl4-openssl-dev armhf 8.7.1-5 [505 kB] Get: 179 http://deb.debian.org/debian unstable/main armhf libcxsparse4 armhf 1:7.7.0+dfsg-2 [79.0 kB] Get: 180 http://deb.debian.org/debian unstable/main armhf libhdf5-openmpi-103-1t64 armhf 1.10.10+repack-3.3 [1248 kB] Get: 181 http://deb.debian.org/debian unstable/main armhf libfftw3-double3 armhf 3.3.10-1+b2 [330 kB] Get: 182 http://deb.debian.org/debian unstable/main armhf libfftw3-single3 armhf 3.3.10-1+b2 [521 kB] Get: 183 http://deb.debian.org/debian unstable/main armhf libfftw3-mpi3 armhf 3.3.10-1+b2 [45.5 kB] Get: 184 http://deb.debian.org/debian unstable/main armhf libmetis5 armhf 5.1.0.dfsg-7+b1 [139 kB] Get: 185 http://deb.debian.org/debian unstable/main armhf libptscotch-7.0 armhf 7.0.4-2 [671 kB] Get: 186 http://deb.debian.org/debian unstable/main armhf libsuperlu-dist8 armhf 8.2.1+dfsg1-1+b1 [481 kB] Get: 187 http://deb.debian.org/debian unstable/main armhf libhypre-2.28.0 armhf 2.28.0-8+b1 [1213 kB] Get: 188 http://deb.debian.org/debian unstable/main armhf libklu2 armhf 1:7.7.0+dfsg-2 [82.0 kB] Get: 189 http://deb.debian.org/debian unstable/main armhf mpi-default-bin armhf 1.15 [2408 B] Get: 190 http://deb.debian.org/debian unstable/main armhf libscalapack-openmpi2.2 armhf 2.2.1-3.1 [1238 kB] Get: 191 http://deb.debian.org/debian unstable/main armhf libmumps-5.6t64 armhf 5.6.2-2.1+b1 [1683 kB] Get: 192 http://deb.debian.org/debian unstable/main armhf libspqr4 armhf 1:7.7.0+dfsg-2 [128 kB] Get: 193 http://deb.debian.org/debian unstable/main armhf libsuperlu6 armhf 6.0.1+dfsg1-1+b1 [139 kB] Get: 194 http://deb.debian.org/debian unstable/main armhf libumfpack6 armhf 1:7.7.0+dfsg-2 [267 kB] Get: 195 http://deb.debian.org/debian unstable/main armhf libyaml-0-2 armhf 0.2.5-1+b1 [45.5 kB] Get: 196 http://deb.debian.org/debian unstable/main armhf libpetsc-real3.19t64 armhf 3.19.6+dfsg1-2.2 [5948 kB] Get: 197 http://deb.debian.org/debian unstable/main armhf libpugixml1v5 armhf 1.14-0.1+b1 [75.4 kB] Get: 198 http://deb.debian.org/debian unstable/main armhf libparpack2t64 armhf 3.9.1-1.1+b1 [81.3 kB] Get: 199 http://deb.debian.org/debian unstable/main armhf libslepc-real3.19t64 armhf 3.19.2+dfsg1-2.1 [1044 kB] Get: 200 http://deb.debian.org/debian unstable/main armhf libdolfinx-real0.8 armhf 1:0.8.0-6 [489 kB] Get: 201 http://deb.debian.org/debian unstable/main armhf libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 202 http://deb.debian.org/debian unstable/main armhf libldl3 armhf 1:7.7.0+dfsg-2 [22.8 kB] Get: 203 http://deb.debian.org/debian unstable/main armhf libsuitesparse-mongoose3 armhf 1:7.7.0+dfsg-2 [46.1 kB] Get: 204 http://deb.debian.org/debian unstable/main armhf librbio4 armhf 1:7.7.0+dfsg-2 [39.2 kB] Get: 205 http://deb.debian.org/debian unstable/main armhf libspex3 armhf 1:7.7.0+dfsg-2 [55.5 kB] Get: 206 http://deb.debian.org/debian unstable/main armhf libparu0 armhf 1:7.7.0+dfsg-2 [62.0 kB] Get: 207 http://deb.debian.org/debian unstable/main armhf libsuitesparse-dev armhf 1:7.7.0+dfsg-2 [1438 kB] Get: 208 http://deb.debian.org/debian unstable/main armhf libscotch-7.0 armhf 7.0.4-2 [416 kB] Get: 209 http://deb.debian.org/debian unstable/main armhf libscotch-dev armhf 7.0.4-2 [1584 kB] Get: 210 http://deb.debian.org/debian unstable/main armhf libptscotch-dev armhf 7.0.4-2 [1382 kB] Get: 211 http://deb.debian.org/debian unstable/main armhf libscalapack-openmpi-dev armhf 2.2.1-3.1 [9772 B] Get: 212 http://deb.debian.org/debian unstable/main armhf libscalapack-mpi-dev armhf 2.2.1-3.1 [4916 B] Get: 213 http://deb.debian.org/debian unstable/main armhf libfftw3-bin armhf 3.3.10-1+b2 [41.9 kB] Get: 214 http://deb.debian.org/debian unstable/main armhf libfftw3-dev armhf 3.3.10-1+b2 [834 kB] Get: 215 http://deb.debian.org/debian unstable/main armhf libfftw3-mpi-dev armhf 3.3.10-1+b2 [52.6 kB] Get: 216 http://deb.debian.org/debian unstable/main armhf libssl-dev armhf 3.2.1-3 [2348 kB] Get: 217 http://deb.debian.org/debian unstable/main armhf opencl-c-headers all 3.0~2023.12.14-1 [45.0 kB] Get: 218 http://deb.debian.org/debian unstable/main armhf opencl-clhpp-headers all 3.0~2023.12.14-1 [49.5 kB] Get: 219 http://deb.debian.org/debian unstable/main armhf ocl-icd-opencl-dev armhf 2.3.2-1+b1 [8656 B] Get: 220 http://deb.debian.org/debian unstable/main armhf libhdf5-openmpi-fortran-102t64 armhf 1.10.10+repack-3.3 [79.3 kB] Get: 221 http://deb.debian.org/debian unstable/main armhf libhdf5-openmpi-hl-100t64 armhf 1.10.10+repack-3.3 [61.3 kB] Get: 222 http://deb.debian.org/debian unstable/main armhf libhdf5-openmpi-hl-fortran-100t64 armhf 1.10.10+repack-3.3 [34.8 kB] Get: 223 http://deb.debian.org/debian unstable/main armhf libhdf5-openmpi-cpp-103-1t64 armhf 1.10.10+repack-3.3 [121 kB] Get: 224 http://deb.debian.org/debian unstable/main armhf libhdf5-openmpi-hl-cpp-100t64 armhf 1.10.10+repack-3.3 [20.9 kB] Get: 225 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo armhf 1:2.1.5-3 [143 kB] Get: 226 http://deb.debian.org/debian unstable/main armhf libjpeg62-turbo-dev armhf 1:2.1.5-3 [260 kB] Get: 227 http://deb.debian.org/debian unstable/main armhf libjpeg-dev armhf 1:2.1.5-3 [71.9 kB] Get: 228 http://deb.debian.org/debian unstable/main armhf libhdf5-openmpi-dev armhf 1.10.10+repack-3.3 [2690 kB] Get: 229 http://deb.debian.org/debian unstable/main armhf libhdf5-mpi-dev armhf 1.10.10+repack-3.3 [15.5 kB] Get: 230 http://deb.debian.org/debian unstable/main armhf libsuperlu-dev armhf 6.0.1+dfsg1-1+b1 [21.8 kB] Get: 231 http://deb.debian.org/debian unstable/main armhf libsuperlu-dist-dev armhf 8.2.1+dfsg1-1+b1 [811 kB] Get: 232 http://deb.debian.org/debian unstable/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 233 http://deb.debian.org/debian unstable/main armhf x11proto-dev all 2024.1-1 [603 kB] Get: 234 http://deb.debian.org/debian unstable/main armhf libxau-dev armhf 1:1.0.9-1+b1 [20.8 kB] Get: 235 http://deb.debian.org/debian unstable/main armhf libxdmcp-dev armhf 1:1.1.2-3+b1 [39.3 kB] Get: 236 http://deb.debian.org/debian unstable/main armhf xtrans-dev all 1.4.0-1 [98.7 kB] Get: 237 http://deb.debian.org/debian unstable/main armhf libpthread-stubs0-dev armhf 0.4-1+b1 [5340 B] Get: 238 http://deb.debian.org/debian unstable/main armhf libxcb1-dev armhf 1.17.0-1 [179 kB] Get: 239 http://deb.debian.org/debian unstable/main armhf libx11-dev armhf 2:1.8.7-1+b1 [818 kB] Get: 240 http://deb.debian.org/debian unstable/main armhf libyaml-dev armhf 0.2.5-1+b1 [56.8 kB] Get: 241 http://deb.debian.org/debian unstable/main armhf libpetsc3.19-dev-common all 3.19.6+dfsg1-2.2 [290 kB] Get: 242 http://deb.debian.org/debian unstable/main armhf libhypre-dev armhf 2.28.0-8+b1 [1487 kB] Get: 243 http://deb.debian.org/debian unstable/main armhf libmumps-headers-dev all 5.6.2-2.1 [34.7 kB] Get: 244 http://deb.debian.org/debian unstable/main armhf libmumps-dev armhf 5.6.2-2.1+b1 [1604 kB] Get: 245 http://deb.debian.org/debian unstable/main armhf valgrind armhf 1:3.20.0-2.1 [7522 kB] Get: 246 http://deb.debian.org/debian unstable/main armhf valgrind-mpi armhf 1:3.20.0-2.1 [119 kB] Get: 247 http://deb.debian.org/debian unstable/main armhf libpetsc-real3.19-dev armhf 3.19.6+dfsg1-2.2 [6261 kB] Get: 248 http://deb.debian.org/debian unstable/main armhf libparpack2-dev armhf 3.9.1-1.1+b1 [96.1 kB] Get: 249 http://deb.debian.org/debian unstable/main armhf libslepc-real3.19-dev armhf 3.19.2+dfsg1-2.1 [4307 kB] Get: 250 http://deb.debian.org/debian unstable/main armhf libdolfinx-real-dev armhf 1:0.8.0-6 [46.0 kB] Get: 251 http://deb.debian.org/debian unstable/main armhf libpugixml-dev armhf 1.14-0.1+b1 [99.4 kB] Get: 252 http://deb.debian.org/debian unstable/main armhf libxml2-dev armhf 2.9.14+dfsg-1.3+b3 [717 kB] Get: 253 http://deb.debian.org/debian unstable/main armhf python3-cffi-backend armhf 1.16.0-2+b2 [99.1 kB] Get: 254 http://deb.debian.org/debian unstable/main armhf python3-ply all 3.11-6 [63.7 kB] Get: 255 http://deb.debian.org/debian unstable/main armhf python3-pycparser all 2.22-1 [78.0 kB] Get: 256 http://deb.debian.org/debian unstable/main armhf python3-cffi all 1.16.0-2 [88.5 kB] Get: 257 http://deb.debian.org/debian unstable/main armhf libpython3.11t64 armhf 3.11.9-1 [1674 kB] Get: 258 http://deb.debian.org/debian unstable/main armhf libexpat1-dev armhf 2.6.2-1 [140 kB] Get: 259 http://deb.debian.org/debian unstable/main armhf libpython3.11-dev armhf 3.11.9-1 [3108 kB] Get: 260 http://deb.debian.org/debian unstable/main armhf libpython3-dev armhf 3.11.8-1 [9560 B] Get: 261 http://deb.debian.org/debian unstable/main armhf python3.11-dev armhf 3.11.9-1 [501 kB] Get: 262 http://deb.debian.org/debian unstable/main armhf python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 263 http://deb.debian.org/debian unstable/main armhf python3-distutils all 3.12.3-1 [131 kB] Get: 264 http://deb.debian.org/debian unstable/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 265 http://deb.debian.org/debian unstable/main armhf libjs-sphinxdoc all 7.2.6-7 [150 kB] Get: 266 http://deb.debian.org/debian unstable/main armhf python3-dev armhf 3.11.8-1 [26.1 kB] Get: 267 http://deb.debian.org/debian unstable/main armhf python3-pkg-resources all 68.1.2-2 [241 kB] Get: 268 http://deb.debian.org/debian unstable/main armhf python3-numpy armhf 1:1.26.4+ds-8 [4132 kB] Get: 269 http://deb.debian.org/debian unstable/main armhf python3-ufl all 2024.1.0-1 [149 kB] Get: 270 http://deb.debian.org/debian unstable/main armhf python3-basix armhf 0.8.0-1 [123 kB] Get: 271 http://deb.debian.org/debian unstable/main armhf python3-setuptools all 68.1.2-2 [468 kB] Get: 272 http://deb.debian.org/debian unstable/main armhf python3-ffcx all 1:0.8.0-1 [100 kB] Get: 273 http://deb.debian.org/debian unstable/main armhf libdolfinx-dev armhf 1:0.8.0-6 [207 kB] Fetched 168 MB in 55s (3080 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19445 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_armhf.deb ... Unpacking libpython3.11-minimal:armhf (3.11.9-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.2-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_armhf.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:armhf (3.11.9-1) ... Setting up libexpat1:armhf (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19761 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_armhf.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../5-libreadline8t64_8.2-4_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:armhf. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_armhf.deb ... Unpacking libpython3.11-stdlib:armhf (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_armhf.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20753 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_armhf.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package libproc2-0:armhf. Preparing to unpack .../001-libproc2-0_2%3a4.0.4-4_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../002-procps_2%3a4.0.4-4_armhf.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../005-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../008-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-4_armhf.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.40-8_armhf.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../011-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.12.1-1_armhf.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package libbsd0:armhf. Preparing to unpack .../013-libbsd0_0.12.2-1_armhf.deb ... Unpacking libbsd0:armhf (0.12.2-1) ... Selecting previously unselected package libedit2:armhf. Preparing to unpack .../014-libedit2_3.1-20230828-1+b1_armhf.deb ... Unpacking libedit2:armhf (3.1-20230828-1+b1) ... Selecting previously unselected package libcbor0.10:armhf. Preparing to unpack .../015-libcbor0.10_0.10.2-1.2_armhf.deb ... Unpacking libcbor0.10:armhf (0.10.2-1.2) ... Selecting previously unselected package libfido2-1:armhf. Preparing to unpack .../016-libfido2-1_1.14.0-1+b2_armhf.deb ... Unpacking libfido2-1:armhf (1.14.0-1+b2) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../017-libkrb5support0_1.20.1-6+b1_armhf.deb ... Unpacking libkrb5support0:armhf (1.20.1-6+b1) ... Selecting previously unselected package libcom-err2:armhf. Preparing to unpack .../018-libcom-err2_1.47.1~rc2-1_armhf.deb ... Unpacking libcom-err2:armhf (1.47.1~rc2-1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../019-libk5crypto3_1.20.1-6+b1_armhf.deb ... Unpacking libk5crypto3:armhf (1.20.1-6+b1) ... Selecting previously unselected package libkeyutils1:armhf. Preparing to unpack .../020-libkeyutils1_1.6.3-3_armhf.deb ... Unpacking libkeyutils1:armhf (1.6.3-3) ... Selecting previously unselected package libkrb5-3:armhf. Preparing to unpack .../021-libkrb5-3_1.20.1-6+b1_armhf.deb ... Unpacking libkrb5-3:armhf (1.20.1-6+b1) ... Selecting previously unselected package libgssapi-krb5-2:armhf. Preparing to unpack .../022-libgssapi-krb5-2_1.20.1-6+b1_armhf.deb ... Unpacking libgssapi-krb5-2:armhf (1.20.1-6+b1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../023-openssh-client_1%3a9.7p1-4_armhf.deb ... Unpacking openssh-client (1:9.7p1-4) ... Selecting previously unselected package m4. Preparing to unpack .../024-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../025-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../026-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../027-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../028-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../029-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../030-libxml2_2.9.14+dfsg-1.3+b3_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package libarchive13t64:armhf. Preparing to unpack .../031-libarchive13t64_3.7.2-2_armhf.deb ... Unpacking libarchive13t64:armhf (3.7.2-2) ... Selecting previously unselected package libbrotli1:armhf. Preparing to unpack .../032-libbrotli1_1.1.0-2+b3_armhf.deb ... Unpacking libbrotli1:armhf (1.1.0-2+b3) ... Selecting previously unselected package libnghttp2-14:armhf. Preparing to unpack .../033-libnghttp2-14_1.61.0-1+b1_armhf.deb ... Unpacking libnghttp2-14:armhf (1.61.0-1+b1) ... Selecting previously unselected package libpsl5t64:armhf. Preparing to unpack .../034-libpsl5t64_0.21.2-1.1_armhf.deb ... Unpacking libpsl5t64:armhf (0.21.2-1.1) ... Selecting previously unselected package librtmp1:armhf. Preparing to unpack .../035-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_armhf.deb ... Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:armhf. Preparing to unpack .../036-libssh2-1t64_1.11.0-4.1+b2_armhf.deb ... Unpacking libssh2-1t64:armhf (1.11.0-4.1+b2) ... Selecting previously unselected package libcurl4t64:armhf. Preparing to unpack .../037-libcurl4t64_8.7.1-5_armhf.deb ... Unpacking libcurl4t64:armhf (8.7.1-5) ... Selecting previously unselected package libjsoncpp25:armhf. Preparing to unpack .../038-libjsoncpp25_1.9.5-6+b2_armhf.deb ... Unpacking libjsoncpp25:armhf (1.9.5-6+b2) ... Selecting previously unselected package librhash0:armhf. Preparing to unpack .../039-librhash0_1.4.3-3+b1_armhf.deb ... Unpacking librhash0:armhf (1.4.3-3+b1) ... Selecting previously unselected package libuv1t64:armhf. Preparing to unpack .../040-libuv1t64_1.48.0-3_armhf.deb ... Unpacking libuv1t64:armhf (1.48.0-3) ... Selecting previously unselected package cmake-data. Preparing to unpack .../041-cmake-data_3.29.3-1_all.deb ... Unpacking cmake-data (3.29.3-1) ... Selecting previously unselected package cmake. Preparing to unpack .../042-cmake_3.29.3-1+b2_armhf.deb ... Unpacking cmake (3.29.3-1+b2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../043-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../044-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../045-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../046-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../047-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../048-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... 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Setting up libpciaccess0:armhf (0.17-3+b1) ... Setting up libxau6:armhf (1:1.0.9-1+b1) ... Setting up libkeyutils1:armhf (1.6.3-3) ... Setting up libboost1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up fonts-mathjax (2.7.9+dfsg-1) ... Setting up libfftw3-single3:armhf (3.3.10-1+b2) ... Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.40-8) ... Setting up libjs-mathjax (2.7.9+dfsg-1) ... Setting up libboost-date-time1.83.0:armhf (1.83.0-2.1+b1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libboost-timer1.83.0:armhf (1.83.0-2.1+b1) ... Setting up libcbor0.10:armhf (0.10.2-1.2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:armhf (0.2.5-1+b1) ... Setting up libscotch-7.0:armhf (7.0.4-2) ... Setting up libboost-regex1.83.0:armhf (1.83.0-2.1+b1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:armhf (1.1.0-2+b3) ... Setting up libboost-system1.83.0:armhf (1.83.0-2.1+b1) ... Setting up libuv1t64:armhf (1.48.0-3) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up libboost-program-options1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up libpsl5t64:armhf (0.21.2-1.1) ... Setting up libnghttp2-14:armhf (1.61.0-1+b1) ... Setting up libboost-thread1.83.0:armhf (1.83.0-2.1+b1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libevent-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up libmetis5:armhf (5.1.0.dfsg-7+b1) ... Setting up libcom-err2:armhf (1.47.1~rc2-1) ... Setting up libldl3:armhf (1:7.7.0+dfsg-2) ... Setting up file (1:5.45-3) ... Setting up libboost-filesystem1.83.0:armhf (1.83.0-2.1+b1) ... Setting up libpthread-stubs0-dev:armhf (0.4-1+b1) ... Setting up libaec0:armhf (1.1.3-1) ... Setting up libpugixml1v5:armhf (1.14-0.1+b1) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up libc6-dbg:armhf (2.38-11) ... Setting up libkrb5support0:armhf (1.20.1-6+b1) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Mon May 13 22:15:20 UTC 2024. Universal Time is now: Mon May 13 22:15:20 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:armhf (1.83.0-2.1+b1) ... Setting up libboost-serialization1.83.0:armhf (1.83.0-2.1+b1) ... Setting up libbtf2:armhf (1:7.7.0+dfsg-2) ... Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:armhf (3.12.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libpkgconf3:armhf (1.8.1-1+b2) ... Setting up libexpat1-dev:armhf (2.6.2-1) ... Setting up libjpeg62-turbo:armhf (1:2.1.5-3) ... Setting up libboost-program-options-dev:armhf (1.83.0.2+b2) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libjpeg62-turbo-dev:armhf (1:2.1.5-3) ... Setting up libboost-chrono1.83.0t64:armhf (1.83.0-2.1+b1) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libproc2-0:armhf (2:4.0.4-4) ... Setting up libssl-dev:armhf (3.2.1-3) ... Setting up libhwloc15:armhf (2.10.0-1+b1) ... Setting up autopoint (0.21-14) ... Setting up libjsoncpp25:armhf (1.9.5-6+b2) ... Setting up icu-devtools (72.1-4+b1) ... Setting up pkgconf-bin (1.8.1-1+b2) ... Setting up libk5crypto3:armhf (1.20.1-6+b1) ... Setting up libltdl7:armhf (2.4.7-7+b1) ... Setting up opencl-c-headers (3.0~2023.12.14-1) ... Setting up libfftw3-double3:armhf (3.3.10-1+b2) ... Setting up libgfortran5:armhf (14-20240429-1) ... Setting up libboost-atomic1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up autoconf (2.71-3) ... Setting up libmumps-headers-dev (5.6.2-2.1) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1) ... Setting up libnuma1:armhf (2.0.18-1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up ocl-icd-libopencl1:armhf (2.3.2-1+b1) ... Setting up librhash0:armhf (1.4.3-3+b1) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up libnl-3-200:armhf (3.7.0-0.3) ... Setting up openmpi-common (4.1.6-13.3) ... Setting up libsuitesparseconfig7:armhf (1:7.7.0+dfsg-2) ... Setting up libsub-override-perl (0.10-1) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up cmake-data (3.29.3-1) ... Setting up libkrb5-3:armhf (1.20.1-6+b1) ... Setting up libboost-dev:armhf (1.83.0.2+b2) ... Setting up libevent-core-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up libboost-system1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up libssh2-1t64:armhf (1.11.0-4.1+b2) ... Setting up libboost-math1.83.0:armhf (1.83.0-2.1+b1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:armhf (1.14.0-1+b2) ... Setting up valgrind (1:3.20.0-2.1) ... Setting up libgfortran-13-dev:armhf (13.2.0-24) ... Setting up libbsd0:armhf (0.12.2-1) ... Setting up valgrind-mpi (1:3.20.0-2.1) ... Setting up readline-common (8.2-4) ... Setting up libicu-dev:armhf (72.1-4+b1) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Setting up libblas-dev:armhf (3.12.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode Setting up libsz2:armhf (1.1.3-1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gfortran-13-arm-linux-gnueabihf (13.2.0-24) ... Setting up libxdmcp6:armhf (1:1.1.2-3+b1) ... Setting up liblapack3:armhf (3.12.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libxcb1:armhf (1.17.0-1) ... Setting up gettext (0.21-14+b1) ... Setting up libarpack2t64:armhf (3.9.1-1.1+b1) ... Setting up libamd3:armhf (1:7.7.0+dfsg-2) ... Setting up libxau-dev:armhf (1:1.0.9-1+b1) ... Setting up libboost-chrono1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up libyaml-dev:armhf (0.2.5-1+b1) ... Setting up libboost-math1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up libtool (2.4.7-7) ... Setting up libcolamd3:armhf (1:7.7.0+dfsg-2) ... Setting up libspex3:armhf (1:7.7.0+dfsg-2) ... Setting up libboost-chrono-dev:armhf (1.83.0.2+b2) ... Setting up libfftw3-bin (3.3.10-1+b2) ... Setting up libsuitesparse-mongoose3:armhf (1:7.7.0+dfsg-2) ... Setting up libevent-pthreads-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up libboost-math-dev:armhf (1.83.0.2+b2) ... Setting up libedit2:armhf (3.1-20230828-1+b1) ... Setting up libevent-openssl-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up libpugixml-dev:armhf (1.14-0.1+b1) ... Setting up libaec-dev:armhf (1.1.3-1) ... Setting up libcxsparse4:armhf (1:7.7.0+dfsg-2) ... Setting up libboost-serialization1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up libjpeg-dev:armhf (1:2.1.5-3) ... Setting up libboost-filesystem1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up libsuperlu6:armhf (6.0.1+dfsg1-1+b1) ... Setting up libcamd3:armhf (1:7.7.0+dfsg-2) ... Setting up gfortran-arm-linux-gnueabihf (4:13.2.0-7) ... Setting up pkgconf:armhf (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:armhf (2.0.18-1) ... Setting up libnl-route-3-200:armhf (3.7.0-0.3) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:armhf (2.4.7-7+b1) ... Setting up libxdmcp-dev:armhf (1:1.1.2-3+b1) ... Setting up libxml2-dev:armhf (2.9.14+dfsg-1.3+b3) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libboost-timer1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up gfortran-13 (13.2.0-24) ... Setting up librbio4:armhf (1:7.7.0+dfsg-2) ... Setting up libboost-date-time1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up opencl-clhpp-headers (3.0~2023.12.14-1) ... Setting up liblapack-dev:armhf (3.12.0-3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:armhf (1.20.1-6+b1) ... Setting up libboost-regex1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up pkg-config:armhf (1.8.1-1+b2) ... Setting up libboost-serialization-dev:armhf (1.83.0.2+b2) ... Setting up libjs-sphinxdoc (7.2.6-7) ... Setting up ocl-icd-opencl-dev:armhf (2.3.2-1+b1) ... Setting up libevent-extra-2.1-7t64:armhf (2.1.12-stable-8.1+b3) ... Setting up libccolamd3:armhf (1:7.7.0+dfsg-2) ... Setting up libreadline8t64:armhf (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libnl-3-dev:armhf (3.7.0-0.3) ... Setting up groff-base (1.23.0-4) ... Setting up libbasix0.8:armhf (0.8.0-1) ... Setting up libx11-6:armhf (2:1.8.7-1+b1) ... Setting up libhwloc-dev:armhf (2.10.0-1+b1) ... Setting up libsuperlu-dev:armhf (6.0.1+dfsg1-1+b1) ... Setting up libbasix-dev:armhf (0.8.0-1) ... Setting up libarchive13t64:armhf (3.7.2-2) ... Setting up libfftw3-dev:armhf (3.3.10-1+b2) ... Setting up libboost-timer-dev:armhf (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:armhf (1.83.0.2+b2) ... Setting up libboost-thread1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up libibverbs1:armhf (50.0-2+b1) ... Setting up libcholmod5:armhf (1:7.7.0+dfsg-2) ... Setting up libarpack2-dev:armhf (3.9.1-1.1+b1) ... Setting up libxcb1-dev:armhf (1.17.0-1) ... Setting up libcurl4t64:armhf (8.7.1-5) ... Setting up ibverbs-providers:armhf (50.0-2+b1) ... Setting up libspqr4:armhf (1:7.7.0+dfsg-2) ... Setting up libboost-iostreams1.83-dev:armhf (1.83.0-2.1+b1) ... Setting up openssh-client (1:9.7p1-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:armhf (3.11.9-1) ... Setting up libpython3.11t64:armhf (3.11.9-1) ... Setting up libx11-dev:armhf (2:1.8.7-1+b1) ... Setting up libxext6:armhf (2:1.3.4-1+b1) ... Setting up libboost-iostreams-dev:armhf (1.83.0.2+b2) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:13.2.0-7) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxnvctrl0:armhf (535.171.04-1) ... Setting up libnl-route-3-dev:armhf (3.7.0-0.3) ... Setting up libcurl4-openssl-dev:armhf (8.7.1-5) ... Setting up libklu2:armhf (1:7.7.0+dfsg-2) ... Setting up libpython3.11-dev:armhf (3.11.9-1) ... Setting up libevent-dev (2.1.12-stable-8.1+b3) ... Setting up libumfpack6:armhf (1:7.7.0+dfsg-2) ... Setting up cmake (3.29.3-1+b2) ... Setting up librdmacm1t64:armhf (50.0-2+b1) ... Setting up libboost-thread-dev:armhf (1.83.0.2+b2) ... Setting up libpython3-stdlib:armhf (3.11.8-1) ... Setting up libfabric1:armhf (1.17.0-3+b1) ... Setting up python3.11 (3.11.9-1) ... Setting up libpython3-dev:armhf (3.11.8-1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up libparu0:armhf (1:7.7.0+dfsg-2) ... Setting up python3 (3.11.8-1) ... Setting up libibverbs-dev:armhf (50.0-2+b1) ... Setting up libhwloc-plugins:armhf (2.10.0-1+b1) ... Setting up libopenmpi3t64:armhf (4.1.6-13.3) ... Setting up libparpack2t64:armhf (3.9.1-1.1+b1) ... Setting up libboost-mpi1.83.0 (1.83.0-2.1+b1) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up openmpi-bin (4.1.6-13.3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up python3-cffi-backend:armhf (1.16.0-2+b2) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... Setting up libptscotch-7.0:armhf (7.0.4-2) ... Setting up python3-setuptools (68.1.2-2) ... Setting up libsuitesparse-dev:armhf (1:7.7.0+dfsg-2) ... Setting up python3-ply (3.11-6) ... Setting up mpi-default-bin (1.15) ... Setting up libcombblas2.0.0t64:armhf (2.0.0-3.1+b1) ... Setting up libfftw3-mpi3:armhf (3.3.10-1+b2) ... Setting up python3-pycparser (2.22-1) ... Setting up libhdf5-openmpi-103-1t64:armhf (1.10.10+repack-3.3) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-numpy (1:1.26.4+ds-8) ... Setting up libhdf5-openmpi-fortran-102t64:armhf (1.10.10+repack-3.3) ... Setting up libhdf5-openmpi-cpp-103-1t64:armhf (1.10.10+repack-3.3) ... Setting up libopenmpi-dev:armhf (4.1.6-13.3) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/openmpi/include to provide /usr/include/arm-linux-gnueabihf/mpi (mpi-arm-linux-gnueabihf) in auto mode Setting up libscalapack-openmpi2.2:armhf (2.2.1-3.1) ... Setting up python3-ufl (2024.1.0-1) ... Setting up libsuperlu-dist8:armhf (8.2.1+dfsg1-1+b1) ... Setting up python3-cffi (1.16.0-2) ... Setting up libfftw3-mpi-dev:armhf (3.3.10-1+b2) ... Setting up libhdf5-openmpi-hl-100t64:armhf (1.10.10+repack-3.3) ... Setting up libsuperlu-dist-dev:armhf (8.2.1+dfsg1-1+b1) ... Setting up libhdf5-openmpi-hl-fortran-100t64:armhf (1.10.10+repack-3.3) ... Setting up libmumps-5.6t64:armhf (5.6.2-2.1+b1) ... Setting up libhypre-2.28.0:armhf (2.28.0-8+b1) ... Setting up libscalapack-openmpi-dev:armhf (2.2.1-3.1) ... Setting up mpi-default-dev (1.15) ... Setting up libpetsc-real3.19t64:armhf (3.19.6+dfsg1-2.2) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/libpetsc_real.so.3.19.6 to provide /usr/lib/arm-linux-gnueabihf/libpetsc.so.3.19 (libpetsc.so.3.19) in auto mode Setting up libhdf5-openmpi-hl-cpp-100t64:armhf (1.10.10+repack-3.3) ... Setting up libscalapack-mpi-dev:armhf (2.2.1-3.1) ... Setting up libhdf5-openmpi-dev (1.10.10+repack-3.3) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-mpi.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-basix (0.8.0-1) ... Setting up libmumps-dev:armhf (5.6.2-2.1+b1) ... Setting up libscotch-dev (7.0.4-2) ... Setting up libparpack2-dev:armhf (3.9.1-1.1+b1) ... Setting up libslepc-real3.19t64 (3.19.2+dfsg1-2.1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/libslepc_real.so.3.19.2 to provide /usr/lib/arm-linux-gnueabihf/libslepc.so.3.19 (libslepc.so.3.19) in auto mode Setting up libhypre-dev:armhf (2.28.0-8+b1) ... Setting up libptscotch-dev (7.0.4-2) ... Setting up python3-ffcx (1:0.8.0-1) ... Setting up libboost-mpi1.83-dev (1.83.0-2.1+b1) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libhdf5-mpi-dev (1.10.10+repack-3.3) ... Setting up libpetsc3.19-dev-common (3.19.6+dfsg1-2.2) ... Setting up libdolfinx-real0.8:armhf (1:0.8.0-6) ... Setting up libpetsc-real3.19-dev:armhf (3.19.6+dfsg1-2.2) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/libpetsc_real.so.3.19.6 to provide /usr/lib/arm-linux-gnueabihf/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real to provide /usr/lib/petscdir/3.19 (petsc3.19) in auto mode Setting up libslepc-real3.19-dev (3.19.2+dfsg1-2.1) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/libslepc_real.so.3.19.2 to provide /usr/lib/arm-linux-gnueabihf/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real to provide /usr/lib/slepcdir/3.19 (slepc3.19) in auto mode Setting up libdolfinx-real-dev:armhf (1:0.8.0-6) ... Setting up libdolfinx-dev:armhf (1:0.8.0-6) ... Processing triggers for libc-bin (2.38-11) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.8.0-1_source.changes dpkg-buildpackage: info: source package fenicsx-performance-tests dpkg-buildpackage: info: source version 0.8.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Francesco Ballarin dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem=cmake --sourcedirectory=src dh_auto_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_clean -O--buildsystem=cmake -O--sourcedirectory=src debian/rules binary dh binary --buildsystem=cmake --sourcedirectory=src dh_update_autotools_config -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf -O--buildsystem=cmake -O--sourcedirectory=src debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' dh_auto_configure -- -D CMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -D CMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF ../src -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI_CXX: /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") -- Found Boost 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0 -- Requested configuration: QUIET REQUIRED COMPONENTS timer;filesystem -- Found boost_headers 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Found boost_filesystem 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/boost_filesystem-1.83.0 -- [x] libboost_filesystem.so.1.83.0 -- [ ] libboost_filesystem.a -- Adding boost_filesystem dependencies: atomic;headers -- Found boost_atomic 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/boost_atomic-1.83.0 -- [x] libboost_atomic.so.1.83.0 -- [ ] libboost_atomic.a -- Adding boost_atomic dependencies: headers -- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70") found components: timer filesystem -- Found Python3: /usr/bin/python3 (found version "3.11.9") found components: Interpreter -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/arm-linux-gnueabihf/hdf5/openmpi/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libcrypto.so;/usr/lib/arm-linux-gnueabihf/libcurl.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.a;/usr/lib/arm-linux-gnueabihf/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_LIBRARIES: /usr/lib/arm-linux-gnueabihf/hdf5/openmpi/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libcrypto.so;/usr/lib/arm-linux-gnueabihf/libcurl.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.a;/usr/lib/arm-linux-gnueabihf/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/openmpi -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/arm-linux-gnueabihf/hdf5/openmpi/libhdf5.so;/usr/lib/arm-linux-gnueabihf/libcrypto.so;/usr/lib/arm-linux-gnueabihf/libcurl.so;/usr/lib/arm-linux-gnueabihf/libsz.so;/usr/lib/arm-linux-gnueabihf/libz.so;/usr/lib/arm-linux-gnueabihf/libdl.a;/usr/lib/arm-linux-gnueabihf/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' -- Found Boost 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0 -- Requested configuration: QUIET REQUIRED COMPONENTS program_options -- Found boost_program_options 1.83.0 at /usr/lib/arm-linux-gnueabihf/cmake/boost_program_options-1.83.0 -- [x] libboost_program_options.so.1.83.0 -- [ ] libboost_program_options.a -- Adding boost_program_options dependencies: headers -- Found Boost: /usr/lib/arm-linux-gnueabihf/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70") found components: program_options -- -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -- Configuring done (15.6s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' dh_auto_build -O--buildsystem=cmake -O--sourcedirectory=src cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' [ 9%] Generating Elasticity.c ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Elasticity.py [ 18%] Generating Poisson.c ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Poisson.py cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenicsx-performance-tests-0.8.0/src /build/reproducible-path/fenicsx-performance-tests-0.8.0/src /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/CMakeFiles/dolfinx-scaling-test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/build make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' [ 27%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o [ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/main.cpp /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.cpp [ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp In file included from /usr/include/c++/13/bits/stl_algo.h:61, from /usr/include/c++/13/algorithm:61, from /usr/include/dolfinx/common/MPI.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.cpp:6: /usr/include/c++/13/bits/stl_heap.h: In function 'constexpr void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = int; _Tp = tuple; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h: In function 'constexpr void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1812 | __insertion_sort(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1812:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/13/bits/stl_algo.h: In function 'constexpr void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1918 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h: In function 'constexpr void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1918 | __introsort_loop(_RandomAccessIterator __first, | ^~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1918:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 /usr/include/c++/13/bits/stl_algo.h:1932:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1932 | std::__introsort_loop(__cut, __last, __depth_limit, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/mesh/generation.h:11, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.cpp:15: /usr/include/dolfinx/mesh/utils.h: In function 'void dolfinx::mesh::impl::reorder_list(std::span<_Type, 4294967295>, std::span) [with T = long long int]': /usr/include/dolfinx/mesh/utils.h:45:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 45 | void reorder_list(std::span list, std::span nodemap) | ^~~~~~~~~~~~ In file included from /usr/include/dolfinx/mesh/Geometry.h:15, from /usr/include/dolfinx/mesh/Mesh.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.cpp:12: /usr/include/dolfinx/common/sort.h: In function 'void dolfinx::radix_sort(std::span<_Type, 4294967295>) [with T = long long int; int BITS = 8]': /usr/include/dolfinx/common/sort.h:27:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 27 | void radix_sort(std::span array) | ^~~~~~~~~~ /usr/include/dolfinx/mesh/Geometry.h: In function 'dolfinx::mesh::Geometry::type> dolfinx::mesh::create_geometry(const Topology&, const dolfinx::fem::CoordinateElement::type>&, std::span, std::span, const U&, int, std::function(const dolfinx::graph::AdjacencyList&)>) [with U = std::vector >]': /usr/include/dolfinx/mesh/Geometry.h:381:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 381 | create_geometry( | ^~~~~~~~~~~~~~~ /usr/include/dolfinx/mesh/Geometry.h:381:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/Geometry.h:423:35: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 423 | const std::vector l2l = graph::build::compute_local_to_local( | ^~~ /usr/include/dolfinx/mesh/Geometry.h:423:35: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/Geometry.h:423:35: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/Geometry.h:423:35: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/c++/13/vector:72, from /usr/include/dolfinx/graph/AdjacencyList.h:16, from /usr/include/dolfinx/common/MPI.h:17: /usr/include/c++/13/bits/vector.tcc: In member function 'constexpr void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]': /usr/include/c++/13/bits/vector.tcc:445:7: note: parameter passing for argument of type 'std::vector >::iterator' changed in GCC 7.1 445 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/common/MPI.h: In function 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::vector >]': /usr/include/dolfinx/common/MPI.h:461:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | distribute_from_postoffice(MPI_Comm comm, std::span indices, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'constexpr std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]', inlined from 'constexpr void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::tuple; _Alloc = std::allocator >]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, inlined from 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::vector >]' at /usr/include/dolfinx/common/MPI.h:493:29: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'constexpr void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, inlined from 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::vector >]' at /usr/include/dolfinx/common/MPI.h:495:12: /usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1948 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1949 | __comp); | ~~~~~~~ In function 'constexpr void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, inlined from 'constexpr void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, inlined from 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::vector >]' at /usr/include/dolfinx/common/MPI.h:495:12: /usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1864 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/common/MPI.h: In function 'std::vector::type> dolfinx::MPI::distribute_data(MPI_Comm, std::span, MPI_Comm, const U&, int) [with U = std::vector >]': /usr/include/dolfinx/common/MPI.h:676:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 676 | distribute_data(MPI_Comm comm0, std::span indices, | ^~~~~~~~~~~~~~~ /usr/include/dolfinx/common/MPI.h: In function 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::span]': /usr/include/dolfinx/common/MPI.h:461:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | distribute_from_postoffice(MPI_Comm comm, std::span indices, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'constexpr std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::tuple}; _Tp = std::tuple; _Alloc = std::allocator >]', inlined from 'constexpr void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = std::tuple; _Alloc = std::allocator >]' at /usr/include/c++/13/bits/stl_vector.h:1299:21, inlined from 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::span]' at /usr/include/dolfinx/common/MPI.h:493:29: /usr/include/c++/13/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'constexpr void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, inlined from 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::span]' at /usr/include/dolfinx/common/MPI.h:495:12: /usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1948 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1949 | __comp); | ~~~~~~~ In function 'constexpr void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/13/bits/stl_algo.h:1950:31, inlined from 'constexpr void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator*, vector > >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, inlined from 'std::vector::type> dolfinx::MPI::distribute_from_postoffice(MPI_Comm, std::span, const U&, std::array, int64_t) [with U = std::span]' at /usr/include/dolfinx/common/MPI.h:495:12: /usr/include/c++/13/bits/stl_algo.h:1859:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1859 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_algo.h:1864:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator*, std::vector > >' changed in GCC 7.1 1864 | std::__insertion_sort(__first, __last, __comp); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/common/MPI.h: In function 'std::vector::type> dolfinx::MPI::distribute_data(MPI_Comm, std::span, MPI_Comm, const U&, int) [with U = std::span]': /usr/include/dolfinx/common/MPI.h:676:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 676 | distribute_data(MPI_Comm comm0, std::span indices, | ^~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/refinement/plaza.h:7, from /usr/include/dolfinx/refinement/refine.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.cpp:16: In function 'std::tuple, std::allocator > >, std::vector >, std::array > dolfinx::refinement::create_new_vertices(MPI_Comm, const dolfinx::graph::AdjacencyList&, const dolfinx::mesh::Mesh&, std::span) [with T = double]', inlined from 'std::tuple, std::vector >, std::array, std::vector >, std::vector > > dolfinx::refinement::plaza::impl::compute_refinement(MPI_Comm, const std::vector&, const dolfinx::graph::AdjacencyList&, const dolfinx::mesh::Mesh&, const std::vector&, const std::vector&, dolfinx::refinement::plaza::Option) [with T = double]' at /usr/include/dolfinx/refinement/plaza.h:313:14: /usr/include/dolfinx/refinement/utils.h:255:49: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 255 | mesh.topology()->index_map(1)->global_to_local(recv_global_edge, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ 256 | recv_local_edge); | ~~~~~~~~~~~~~~~~ /usr/include/dolfinx/refinement/plaza.h: In function 'std::tuple, std::vector >, std::array, std::vector >, std::vector > > dolfinx::refinement::plaza::impl::compute_refinement(MPI_Comm, const std::vector&, const dolfinx::graph::AdjacencyList&, const dolfinx::mesh::Mesh&, const std::vector&, const std::vector&, dolfinx::refinement::plaza::Option) [with T = double]': /usr/include/dolfinx/refinement/plaza.h:408:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 408 | simplex_set = get_simplices(indices, longest_edge, tdim, uniform); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/basix/finite-element.h:12, from /usr/include/dolfinx/fem/FiniteElement.h:11, from /usr/include/dolfinx/fem/Function.h:10, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:7: /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_tranpose_matrix_right(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 285 | void apply_tranpose_matrix_right( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 243 | void apply_matrix( | ^~~~~~~~~~~~ /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, from /usr/include/dolfinx/fem/assembler.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:16: /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:164) [with T = double; int _bs = 1; auto:164 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 847 | void pack(std::span coeffs, std::int32_t cell, int bs, std::span v, | ^~~~ /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:164) [with T = double; int _bs = -1; auto:164 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:164) [with T = double; int _bs = 3; auto:164 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:164) [with T = double; int _bs = 2; auto:164 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h: In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, MPI_Comm, const U&, std::array, const CellPartitionFunction&) [with U = std::vector >]': /usr/include/dolfinx/mesh/utils.h:785:64: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 785 | Mesh> create_mesh( | ^~~~~~~~~~~ /usr/include/dolfinx/mesh/utils.h:816:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 816 | auto t = graph::regular_adjacency_list( | ^ /usr/include/dolfinx/mesh/utils.h:816:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:842:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 842 | std::vector cells1_v | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:842:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In function 'constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'constexpr void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, inlined from 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, MPI_Comm, const U&, std::array, const CellPartitionFunction&) [with U = std::vector >]' at /usr/include/dolfinx/mesh/utils.h:876:14: /usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1948 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1949 | __comp); | ~~~~~~~ /usr/include/dolfinx/mesh/utils.h: In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, MPI_Comm, const U&, std::array, const CellPartitionFunction&) [with U = std::vector >]': /usr/include/dolfinx/mesh/utils.h:887:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 887 | Topology topology = create_topology(comm, cells1_v, original_idx1, | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:887:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:907:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 907 | Geometry geometry = create_geometry(topology, element, nodes1, cells1.array(), | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:907:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:907:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/generation.h: In function 'dolfinx::mesh::Mesh dolfinx::mesh::impl::build_tet(MPI_Comm, MPI_Comm, std::array, 2>, std::array, const dolfinx::mesh::CellPartitionFunction&) [with T = double]': /usr/include/dolfinx/mesh/generation.h:374:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 374 | {x.size() / 3, 3}, partitioner); | ^ /usr/include/dolfinx/mesh/generation.h:374:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h: In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, const U&, std::array, GhostMode) [with U = std::vector >]': /usr/include/dolfinx/mesh/utils.h:934:1: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 934 | create_mesh(MPI_Comm comm, std::span cells, | ^~~~~~~~~~~ /usr/include/dolfinx/mesh/utils.h:940:77: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 940 | return create_mesh(comm, comm, cells, elements, comm, x, xshape, nullptr); | ^ /usr/include/dolfinx/mesh/utils.h:940:77: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:944:59: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 944 | create_cell_partitioner(ghost_mode)); | ^ /usr/include/dolfinx/mesh/utils.h:944:59: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h: In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, MPI_Comm, const U&, std::array, const CellPartitionFunction&) [with U = std::span]': /usr/include/dolfinx/mesh/utils.h:785:64: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 785 | Mesh> create_mesh( | ^~~~~~~~~~~ /usr/include/dolfinx/mesh/utils.h:816:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 816 | auto t = graph::regular_adjacency_list( | ^ /usr/include/dolfinx/mesh/utils.h:816:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:842:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 842 | std::vector cells1_v | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:842:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In function 'constexpr void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]', inlined from 'constexpr void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator >]' at /usr/include/c++/13/bits/stl_algo.h:4861:18, inlined from 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, MPI_Comm, const U&, std::array, const CellPartitionFunction&) [with U = std::span]' at /usr/include/dolfinx/mesh/utils.h:876:14: /usr/include/c++/13/bits/stl_algo.h:1947:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1947 | std::__introsort_loop(__first, __last, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1948 | std::__lg(__last - __first) * 2, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1949 | __comp); | ~~~~~~~ /usr/include/dolfinx/mesh/utils.h: In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, MPI_Comm, const U&, std::array, const CellPartitionFunction&) [with U = std::span]': /usr/include/dolfinx/mesh/utils.h:887:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 887 | Topology topology = create_topology(comm, cells1_v, original_idx1, | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:887:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:907:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 907 | Geometry geometry = create_geometry(topology, element, nodes1, cells1.array(), | ^~~~~~~~ /usr/include/dolfinx/mesh/utils.h:907:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:907:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 [ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp /usr/include/dolfinx/refinement/utils.h: In function 'dolfinx::mesh::Mesh dolfinx::refinement::partition(const dolfinx::mesh::Mesh&, const dolfinx::graph::AdjacencyList&, std::span, std::array, bool, dolfinx::mesh::GhostMode) [with T = double]': /usr/include/dolfinx/refinement/utils.h:279:15: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 279 | mesh::Mesh partition(const mesh::Mesh& old_mesh, | ^~~~~~~~~ In function 'dolfinx::mesh::Mesh::type> dolfinx::mesh::create_mesh(MPI_Comm, std::span, const dolfinx::fem::CoordinateElement::type>&, const U&, std::array, GhostMode) [with U = std::span]', inlined from 'dolfinx::mesh::Mesh dolfinx::refinement::partition(const dolfinx::mesh::Mesh&, const dolfinx::graph::AdjacencyList&, std::span, std::array, bool, dolfinx::mesh::GhostMode) [with T = double]' at /usr/include/dolfinx/refinement/utils.h:289:40: /usr/include/dolfinx/mesh/utils.h:940:77: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 940 | return create_mesh(comm, comm, cells, elements, comm, x, xshape, nullptr); | ^ /usr/include/dolfinx/mesh/utils.h:940:77: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/mesh/utils.h:944:59: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 944 | create_cell_partitioner(ghost_mode)); | ^ /usr/include/dolfinx/mesh/utils.h:944:59: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/refinement/utils.h: In function 'dolfinx::mesh::Mesh dolfinx::refinement::partition(const dolfinx::mesh::Mesh&, const dolfinx::graph::AdjacencyList&, std::span, std::array, bool, dolfinx::mesh::GhostMode) [with T = double]': /usr/include/dolfinx/refinement/utils.h:308:78: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 308 | old_mesh.comm(), new_coords, xshape, partitioner); | ^ /usr/include/dolfinx/refinement/utils.h:308:78: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/refinement/plaza.h: In function 'std::tuple, std::vector >, std::vector > > dolfinx::refinement::plaza::refine(const dolfinx::mesh::Mesh&, std::span, bool, Option) [with T = double]': /usr/include/dolfinx/refinement/plaza.h:536:60: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 536 | std::move(parent_cell), std::move(parent_facet)}; | ^ /usr/include/dolfinx/refinement/plaza.h:536:60: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/refinement/plaza.h: In function 'std::tuple, std::vector >, std::vector > > dolfinx::refinement::plaza::refine(const dolfinx::mesh::Mesh&, bool, Option) [with T = double]': /usr/include/dolfinx/refinement/plaza.h:488:60: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 488 | std::move(parent_cell), std::move(parent_facet)}; | ^ /usr/include/dolfinx/refinement/plaza.h:488:60: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:11: /usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, T) const [with T = double; U = double]': /usr/include/dolfinx/fem/DirichletBC.h:483:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 483 | void set(std::span x, T scale = 1) const | ^~~ In file included from /usr/include/dolfinx/fem/Function.h:11: /usr/include/dolfinx/fem/FunctionSpace.h: In member function 'std::vector dolfinx::fem::FunctionSpace::tabulate_dof_coordinates(bool) const [with T = double]': /usr/include/dolfinx/fem/FunctionSpace.h:276:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 276 | cmap.tabulate(0, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/Function.h:12: /usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': /usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 72 | cmap.tabulate(0, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1019:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1019 | void pack_coefficients(const Form& form, IntegralType integral_type, | ^~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1206 | pack_coefficients(form, key.first, key.second, val.first, val.second); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 [ 63%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = false; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1531:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1531 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1552 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1553 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1554 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1573:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1573 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1574 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1575 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1573:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1584 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1585 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1586 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_inv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:549:27, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:361:21, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1650:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1650 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1651 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:532:22, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:373:16, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1618:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1618 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1619 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tt_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:631:29, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:478:23, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1690:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1690 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1691 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:614:31, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:482:25, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1714:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1714 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1715 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = true; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1531:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1531 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1552 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1553 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1554 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1584 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1585 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1586 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1595:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1595 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1596 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1597 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1595:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:565:23, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:365:17, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1634:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1634 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1635 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:581:25, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:369:19, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1666:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1666 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1667 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tt_inv_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:648:33, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:474:27, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1762:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1762 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1763 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:597:28, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:486:22, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1738:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1738 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1739 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/CoordinateElement.h:17, from /usr/include/dolfinx/fem/FunctionSpace.h:9: /usr/include/dolfinx/common/math.h: In function 'auto dolfinx::math::det(Matrix) [with Matrix = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:86:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 86 | auto det(Matrix A) | ^~~ /usr/include/dolfinx/fem/CoordinateElement.h: In static member function 'static double dolfinx::fem::CoordinateElement::compute_jacobian_determinant(const U&, std::span) [with U = std::mdspan, std::layout_right, std::default_accessor >; T = double]': /usr/include/dolfinx/fem/CoordinateElement.h:131:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 131 | compute_jacobian_determinant(const U& J, std::span w) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 124 | void inv(U A, V B) | ^~~ /usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::pinv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 211 | void pinv(U A, V P) | ^~~~ /usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h:245:8: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 245 | inv(ATA, Inv); | ~~~^~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h: In function 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/interpolate.h:739:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 739 | void interpolate(Function& u, std::span f, | ^~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:989:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 989 | cmap.tabulate(1, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:1043:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1043 | detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In static member function 'static void dolfinx::fem::CoordinateElement::compute_jacobian_inverse(const U&, V&&) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >&; T = double]', inlined from 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]' at /usr/include/dolfinx/fem/interpolate.h:1042:38: /usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 121 | math::pinv(J, K); | ~~~~~~~~~~^~~~~~ /usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/Function.h:260:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 260 | fem::interpolate(*this, std::span(fx.data(), fx.size()), | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 | _fshape, cells); | ~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/assembler.h:11: /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:1122:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1122 | void assemble_vector( | ^~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_exterior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:191, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:192, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:193, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:191 = std::function; auto:192 = std::function, std::span, int, int)>; auto:193 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:258:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 258 | void _lift_bc_exterior_facets( | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_cells(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:188, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:189, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:190, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs0 = -1; int _bs1 = -1; auto:188 = std::function; auto:189 = std::function, std::span, int, int)>; auto:190 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:75:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 75 | void _lift_bc_cells( | ^~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_interior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, int, auto:194, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:195, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:196, std::span, std::span, int, std::span, std::span, const std::function&, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:194 = std::function; auto:195 = std::function, std::span, int, int)>; auto:196 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:399:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 399 | void _lift_bc_interior_facets( | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::lift_bc(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&, std::span, std::span, std::span, T) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:902:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 902 | void lift_bc(std::span b, const Form& a, mdspan2_t x_dofmap, | ^~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:902:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/assemble_vector_impl.h:976:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 976 | _lift_bc_cells(b, x_dofmap, x, kernel, cells, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 | {dofmap0, bs0, a.domain(IntegralType::cell, i, *mesh0)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 | P0, | ~~~ 979 | {dofmap1, bs1, a.domain(IntegralType::cell, i, *mesh1)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 980 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 981 | bc_values1, bc_markers1, x0, scale); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:991:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 991 | _lift_bc_exterior_facets( | ~~~~~~~~~~~~~~~~~~~~~~~~^ 992 | b, x_dofmap, x, kernel, a.domain(IntegralType::exterior_facet, i), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 | {dofmap0, bs0, a.domain(IntegralType::exterior_facet, i, *mesh0)}, P0, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 | {dofmap1, bs1, a.domain(IntegralType::exterior_facet, i, *mesh1)}, P1T, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 | constants, coeffs, cstride, cell_info0, cell_info1, bc_values1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 | bc_markers1, x0, scale); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1021:31: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1021 | _lift_bc_interior_facets( | ~~~~~~~~~~~~~~~~~~~~~~~~^ 1022 | b, x_dofmap, x, num_cell_facets, kernel, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1023 | a.domain(IntegralType::interior_facet, i), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1024 | {dofmap0, bs0, a.domain(IntegralType::interior_facet, i, *mesh0)}, P0, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1025 | {dofmap1, bs1, a.domain(IntegralType::interior_facet, i, *mesh1)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, get_perm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 | bc_values1, bc_markers1, x0, scale); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp: In function 'void {anonymous}::unpack_fn(std::span, std::span, std::span, std::function)': /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:39:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 39 | void unpack_fn(std::span in, std::span idx, | ^~~~~~~~~ /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:39:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/basix/finite-element.h:12, from /usr/include/dolfinx/fem/FiniteElement.h:11, from /usr/include/dolfinx/fem/Function.h:10, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:7: /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 243 | void apply_matrix( | ^~~~~~~~~~~~ /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In function 'void dolfinx::fem::impl::apply_lifting(std::span<_Type, 4294967295>, std::vector > >, mdspan2_t, std::span >, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]', inlined from 'void dolfinx::fem::apply_lifting(std::span<_Type, 4294967295>, const std::vector > >&, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:172:27: /usr/include/dolfinx/fem/assemble_vector_impl.h:1101:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1101 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 | bc_markers1, x0[j], scale); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1101:19: note: parameter passing for argument of type 'const std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/assemble_vector_impl.h:1106:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1106 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1107 | bc_markers1, std::span(), scale); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1106:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, from /usr/include/dolfinx/fem/assembler.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:17: /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:166) [with T = double; int _bs = 1; auto:166 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 847 | void pack(std::span coeffs, std::int32_t cell, int bs, std::span v, | ^~~~ /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:166) [with T = double; int _bs = 2; auto:166 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:166) [with T = double; int _bs = -1; auto:166 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:166) [with T = double; int _bs = 3; auto:166 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:14: /usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, T) const [with T = double; U = double]': /usr/include/dolfinx/fem/DirichletBC.h:483:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 483 | void set(std::span x, T scale = 1) const | ^~~ In file included from /usr/include/dolfinx/fem/Function.h:12: /usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': /usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 72 | cmap.tabulate(0, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]', inlined from 'void dolfinx::fem::assemble_vector(std::span<_Type, 4294967295>, const Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:113:24, inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > elastic::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:214:26: /usr/include/dolfinx/fem/assemble_vector_impl.h:1279:20: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1279 | assemble_vector(b, L, mesh->geometry().dofmap(), mesh->geometry().x(), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1280 | constants, coefficients); | ~~~~~~~~~~~~~~~~~~~~~~~~ In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > elastic::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp:220:25: /usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | bc->set(b, scale); | ~~~~~~~^~~~~~~~~~ In file included from /usr/include/basix/finite-element.h:12, from /usr/include/dolfinx/fem/FiniteElement.h:11, from /usr/include/dolfinx/fem/Function.h:10, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:7: /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_tranpose_matrix_right(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 285 | void apply_tranpose_matrix_right( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/precompute.h:285:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1019:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1019 | void pack_coefficients(const Form& form, IntegralType integral_type, | ^~~~~~~~~~~~~~~~~ /usr/include/basix/precompute.h: In function 'void basix::precompute::apply_matrix(std::span, std::mdspan >, std::span, std::size_t, std::size_t) [with T = double; E = double]': /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 243 | void apply_matrix( | ^~~~~~~~~~~~ /usr/include/basix/precompute.h:243:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1206 | pack_coefficients(form, key.first, key.second, val.first, val.second); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/fem/CoordinateElement.h:17, from /usr/include/dolfinx/fem/FunctionSpace.h:9, from /usr/include/dolfinx/fem/Function.h:11: /usr/include/dolfinx/common/math.h: In function 'auto dolfinx::math::det(Matrix) [with Matrix = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:86:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 86 | auto det(Matrix A) | ^~~ /usr/include/dolfinx/fem/CoordinateElement.h: In static member function 'static double dolfinx::fem::CoordinateElement::compute_jacobian_determinant(const U&, std::span) [with U = std::mdspan, std::layout_right, std::default_accessor >; T = double]': /usr/include/dolfinx/fem/CoordinateElement.h:131:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 131 | compute_jacobian_determinant(const U& J, std::span w) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/dolfinx/fem/assemble_matrix_impl.h:13, from /usr/include/dolfinx/fem/assembler.h:9, from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:15: /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:164) [with T = double; int _bs = 1; auto:164 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 847 | void pack(std::span coeffs, std::int32_t cell, int bs, std::span v, | ^~~~ /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:164) [with T = double; int _bs = -1; auto:164 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:164) [with T = double; int _bs = 3; auto:164 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::impl::pack(std::span<_Type, 4294967295>, int32_t, int, std::span, std::span, const dolfinx::fem::DofMap&, auto:164) [with T = double; int _bs = 2; auto:164 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/utils.h:847:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 124 | void inv(U A, V B) | ^~~ /usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::pinv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 211 | void pinv(U A, V P) | ^~~~ /usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h:245:8: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 245 | inv(ATA, Inv); | ~~~^~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h: In function 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/interpolate.h:739:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 739 | void interpolate(Function& u, std::span f, | ^~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:989:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 989 | cmap.tabulate(1, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:1043:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1043 | detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In static member function 'static void dolfinx::fem::CoordinateElement::compute_jacobian_inverse(const U&, V&&) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >&; T = double]', inlined from 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]' at /usr/include/dolfinx/fem/interpolate.h:1042:38: /usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 121 | math::pinv(J, K); | ~~~~~~~~~~^~~~~~ /usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/Function.h:260:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 260 | fem::interpolate(*this, std::span(fx.data(), fx.size()), | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 | _fshape, cells); | ~~~~~~~~~~~~~~~ [ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mem.cpp In file included from /usr/include/dolfinx/fem/assembler.h:11: /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:1122:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1122 | void assemble_vector( | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:12: /usr/include/dolfinx/fem/DirichletBC.h: In member function 'void dolfinx::fem::DirichletBC::set(std::span<_Type, 4294967295>, T) const [with T = double; U = double]': /usr/include/dolfinx/fem/DirichletBC.h:483:8: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 483 | void set(std::span x, T scale = 1) const | ^~~ In file included from /usr/include/dolfinx/fem/Function.h:12: /usr/include/dolfinx/fem/interpolate.h: In function 'std::vector dolfinx::fem::interpolation_coords(const FiniteElement&, const dolfinx::mesh::Geometry&, std::span) [with T = double]': /usr/include/dolfinx/fem/interpolate.h:72:16: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 72 | cmap.tabulate(0, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:1279:20: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1279 | assemble_vector(b, L, mesh->geometry().dofmap(), mesh->geometry().x(), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1280 | constants, coefficients); | ~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = false; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1531:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1531 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1552 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1553 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1554 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1573:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1573 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1574 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1575 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1573:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1584 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1585 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1586 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_inv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:549:27, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:361:21, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1650:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1650 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1651 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:532:22, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:373:16, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1618:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1618 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1619 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = true; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1531:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1531 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1552 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1553 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1554 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1584 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1585 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1586 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1595:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1595 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1596 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1597 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1595:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:565:23, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:365:17, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1634:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1634 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1635 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:581:25, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:369:19, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1666:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1666 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1667 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assembler.h: In function 'void dolfinx::fem::assemble_vector(std::span<_Type, 4294967295>, const Form&) [with T = double; U = double]': /usr/include/dolfinx/fem/assembler.h:121:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 121 | void assemble_vector(std::span b, const Form& L) | ^~~~~~~~~~~~~~~ In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', inlined from 'cgpoisson::problem(std::shared_ptr >, int, std::string)::&, const dolfinx::la::Vector&)>::&, dolfinx::la::Vector&)>' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:209:29: /usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | bc->set(b, scale); | ~~~~~~~^~~~~~~~~~ In file included from /usr/include/dolfinx/la/Vector.h:13, from /usr/include/dolfinx/fem/Function.h:16: In member function 'void dolfinx::common::Scatterer::scatter_rev_end(std::span, std::span, F, BinaryOp, std::span) [with T = double; F = void (*)(std::span, std::span, std::span, std::function); BinaryOp = std::plus; Allocator = std::allocator]', inlined from 'cgpoisson::problem(std::shared_ptr >, int, std::string)::&, const dolfinx::la::Vector&)>::&, dolfinx::la::Vector&)>' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:221:29: /usr/include/dolfinx/common/Scatterer.h:532:14: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 532 | unpack_fn(local_buffer, _local_inds, local_data, op); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void dolfinx::common::Scatterer::scatter_fwd_end(std::span, std::span, F, std::span) const [with T = double; F = void (*)(std::span, std::span, std::span, std::function); Allocator = std::allocator]', inlined from 'cgpoisson::problem(std::shared_ptr >, int, std::string)::&, const dolfinx::la::Vector&)>::&, dolfinx::la::Vector&)>' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:227:29: /usr/include/dolfinx/common/Scatterer.h:324:14: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 324 | unpack_fn(remote_buffer, _remote_inds, remote_data, | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 | [](T /*a*/, T b) { return b; }); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, IntegralType, int, std::span<_Type, 4294967295>, int) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1019:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1019 | void pack_coefficients(const Form& form, IntegralType integral_type, | ^~~~~~~~~~~~~~~~~ [ 81%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o /usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/Elasticity.c /usr/include/dolfinx/fem/utils.h: In function 'void dolfinx::fem::pack_coefficients(const Form&, std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1206 | pack_coefficients(form, key.first, key.second, val.first, val.second); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/utils.h:1206:25: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In file included from /usr/include/dolfinx/fem/CoordinateElement.h:17, from /usr/include/dolfinx/fem/FunctionSpace.h:9, from /usr/include/dolfinx/fem/Function.h:11: /usr/include/dolfinx/common/math.h: In function 'auto dolfinx::math::det(Matrix) [with Matrix = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:86:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 86 | auto det(Matrix A) | ^~~ /usr/include/dolfinx/fem/CoordinateElement.h: In static member function 'static double dolfinx::fem::CoordinateElement::compute_jacobian_determinant(const U&, std::span) [with U = std::mdspan, std::layout_right, std::default_accessor >; T = double]': /usr/include/dolfinx/fem/CoordinateElement.h:131:3: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 131 | compute_jacobian_determinant(const U& J, std::span w) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::inv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 124 | void inv(U A, V B) | ^~~ /usr/include/dolfinx/common/math.h:124:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h: In function 'void dolfinx::math::pinv(U, V) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >]': /usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 211 | void pinv(U A, V P) | ^~~~ /usr/include/dolfinx/common/math.h:211:6: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/common/math.h:245:8: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 245 | inv(ATA, Inv); | ~~~^~~~~~~~~~ In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > cgpoisson::problem(std::shared_ptr >, int, std::string)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:153:25: /usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | bc->set(b, scale); | ~~~~~~~^~~~~~~~~~ In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > cgpoisson::problem(std::shared_ptr >, int, std::string)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp:160:25: /usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | bc->set(b, scale); | ~~~~~~~^~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h: In function 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/interpolate.h:739:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 739 | void interpolate(Function& u, std::span f, | ^~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:989:18: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 989 | cmap.tabulate(1, X, Xshape, phi_b); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/interpolate.h:1043:52: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1043 | detJ[p] = cmap.compute_jacobian_determinant(_J, det_scratch); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ In static member function 'static void dolfinx::fem::CoordinateElement::compute_jacobian_inverse(const U&, V&&) [with U = std::mdspan, std::layout_right, std::default_accessor >; V = std::mdspan, std::layout_right, std::default_accessor >&; T = double]', inlined from 'void dolfinx::fem::interpolate(Function&, std::span, std::array, std::span) [with T = double; U = double]' at /usr/include/dolfinx/fem/interpolate.h:1042:38: /usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 121 | math::pinv(J, K); | ~~~~~~~~~~^~~~~~ /usr/include/dolfinx/fem/CoordinateElement.h:121:17: note: parameter passing for argument of type 'std::mdspan, std::layout_right, std::default_accessor >' changed in GCC 7.1 /usr/include/dolfinx/fem/Function.h: In member function 'void dolfinx::fem::Function::interpolate(const std::function, std::vector >(std::mdspan >)>&, std::span) [with T = double; U = double]': /usr/include/dolfinx/fem/Function.h:260:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 260 | fem::interpolate(*this, std::span(fx.data(), fx.size()), | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 | _fshape, cells); | ~~~~~~~~~~~~~~~ [ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o /usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include -isystem /usr/lib/arm-linux-gnueabihf/openmpi/include/openmpi -isystem /usr/include/hdf5/openmpi -isystem /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -isystem /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/Poisson.c In file included from /usr/include/dolfinx/fem/assembler.h:11: /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:1122:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1122 | void assemble_vector( | ^~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_exterior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:191, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:192, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:193, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:191 = std::function; auto:192 = std::function, std::span, int, int)>; auto:193 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:258:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 258 | void _lift_bc_exterior_facets( | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_cells(std::span<_Type, 4294967295>, mdspan2_t, std::span >, auto:188, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:189, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:190, std::span, std::span, int, std::span, std::span, std::span, std::span, std::span, T) [with T = double; int _bs0 = -1; int _bs1 = -1; auto:188 = std::function; auto:189 = std::function, std::span, int, int)>; auto:190 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:75:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 75 | void _lift_bc_cells( | ^~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::_lift_bc_interior_facets(std::span<_Type, 4294967295>, mdspan2_t, std::span >, int, auto:194, std::span, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:195, std::tuple, std::layout_right, std::default_accessor >, int, std::span >, auto:196, std::span, std::span, int, std::span, std::span, const std::function&, std::span, std::span, std::span, T) [with T = double; int _bs = -1; auto:194 = std::function; auto:195 = std::function, std::span, int, int)>; auto:196 = std::function, std::span, int, int)>]': /usr/include/dolfinx/fem/assemble_vector_impl.h:399:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 399 | void _lift_bc_interior_facets( | ^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h: In function 'void dolfinx::fem::impl::lift_bc(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, mdspan2_t, std::span >, std::span, const std::map, std::pair, int> >&, std::span, std::span, std::span, T) [with T = double; U = double]': /usr/include/dolfinx/fem/assemble_vector_impl.h:902:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 902 | void lift_bc(std::span b, const Form& a, mdspan2_t x_dofmap, | ^~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:902:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/assemble_vector_impl.h:976:21: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 976 | _lift_bc_cells(b, x_dofmap, x, kernel, cells, | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 | {dofmap0, bs0, a.domain(IntegralType::cell, i, *mesh0)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 | P0, | ~~~ 979 | {dofmap1, bs1, a.domain(IntegralType::cell, i, *mesh1)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 980 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 981 | bc_values1, bc_markers1, x0, scale); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:991:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 991 | _lift_bc_exterior_facets( | ~~~~~~~~~~~~~~~~~~~~~~~~^ 992 | b, x_dofmap, x, kernel, a.domain(IntegralType::exterior_facet, i), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 | {dofmap0, bs0, a.domain(IntegralType::exterior_facet, i, *mesh0)}, P0, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 | {dofmap1, bs1, a.domain(IntegralType::exterior_facet, i, *mesh1)}, P1T, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 995 | constants, coeffs, cstride, cell_info0, cell_info1, bc_values1, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 | bc_markers1, x0, scale); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1021:31: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1021 | _lift_bc_interior_facets( | ~~~~~~~~~~~~~~~~~~~~~~~~^ 1022 | b, x_dofmap, x, num_cell_facets, kernel, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1023 | a.domain(IntegralType::interior_facet, i), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1024 | {dofmap0, bs0, a.domain(IntegralType::interior_facet, i, *mesh0)}, P0, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1025 | {dofmap1, bs1, a.domain(IntegralType::interior_facet, i, *mesh1)}, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 | P1T, constants, coeffs, cstride, cell_info0, cell_info1, get_perm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1027 | bc_values1, bc_markers1, x0, scale); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'void dolfinx::fem::impl::apply_lifting(std::span<_Type, 4294967295>, std::vector > >, mdspan2_t, std::span >, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]', inlined from 'void dolfinx::fem::apply_lifting(std::span<_Type, 4294967295>, const std::vector > >&, const std::vector >&, const std::vector, std::pair, int> > >&, const std::vector > > >&, const std::vector >&, T) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:172:27: /usr/include/dolfinx/fem/assemble_vector_impl.h:1101:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1101 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 | bc_markers1, x0[j], scale); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1101:19: note: parameter passing for argument of type 'const std::span' changed in GCC 7.1 /usr/include/dolfinx/fem/assemble_vector_impl.h:1106:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1106 | lift_bc(b, *a[j], x_dofmap, x, constants[j], coeffs[j], bc_values1, | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1107 | bc_markers1, std::span(), scale); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/dolfinx/fem/assemble_vector_impl.h:1106:19: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = false; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1531:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1531 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1552 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1553 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1554 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1573:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1573 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1574 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1575 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1573:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1584 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1585 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1586 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_inv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:549:27, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:361:21, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1650:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1650 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1651 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:532:22, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:373:16, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1618:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1618 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1619 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tt_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:631:29, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:478:23, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1690:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1690 | transform_data(u, n, cell_info, _etrans, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 1691 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:614:31, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:482:25, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1714:29: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1714 | transform_data(u, n, cell_info, _etrans_invT, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1715 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h: In member function 'void basix::FiniteElement::transform_data(std::span, int, uint32_t, const std::map, std::pair, std::array > > > >&, OP) const [with T = double; bool post = true; OP = void (*)(std::span, std::mdspan, std::layout_right, std::default_accessor >, std::span, unsigned int, unsigned int); F = double]': /usr/include/basix/finite-element.h:1531:6: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1531 | void FiniteElement::transform_data( | ^~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1552 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1553 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1554 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1552:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1584 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1585 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1586 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1584:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 /usr/include/basix/finite-element.h:1595:13: note: parameter passing for argument of type 'basix::FiniteElement::mdspan_t' {aka 'std::mdspan, std::layout_right, std::default_accessor >'} changed in GCC 7.1 1595 | op(std::span(v_size_t), | ~~^~~~~~~~~~~~~~~~~~~~~ 1596 | mdspan_t(matrix.first.data(), matrix.second), data, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1597 | dofstart, block_size); | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/basix/finite-element.h:1595:13: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 In member function 'void basix::FiniteElement::Tt_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:565:23, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:365:17, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1634:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1634 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1635 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tinv_apply(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tinv_apply(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:581:25, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:369:19, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1666:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1666 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1667 | precompute::apply_matrix); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::Tt_inv_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::Tt_inv_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:648:33, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:474:27, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1762:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1762 | transform_data(u, n, cell_info, _etrans_inv, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1763 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In member function 'void basix::FiniteElement::T_apply_right(std::span, int, uint32_t) const [with T = double; F = double]', inlined from 'void dolfinx::fem::FiniteElement::T_apply_right(std::span, uint32_t, int) const [with U = double; T = double]' at /usr/include/dolfinx/fem/FiniteElement.h:597:28, inlined from 'dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>' at /usr/include/dolfinx/fem/FiniteElement.h:486:22, inlined from 'constexpr _Res std::__invoke_impl(__invoke_other, _Fn&&, _Args&& ...) [with _Res = void; _Fn = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:61:36, inlined from 'constexpr std::enable_if_t, _Res> std::__invoke_r(_Callable&&, _Args&& ...) [with _Res = void; _Callable = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, span, int32_t, int)>&; _Args = {span, span, int, int}]' at /usr/include/c++/13/bits/invoke.h:111:28, inlined from 'static _Res std::_Function_handler<_Res(_ArgTypes ...), _Functor>::_M_invoke(const std::_Any_data&, _ArgTypes&& ...) [with _Res = void; _Functor = dolfinx::fem::FiniteElement::dof_transformation_right_fn(dolfinx::fem::doftransform, bool) const::, std::span, int32_t, int)>; _ArgTypes = {std::span, std::span, int, int}]' at /usr/include/c++/13/bits/std_function.h:290:30: /usr/include/basix/finite-element.h:1738:28: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1738 | transform_data(u, n, cell_info, _etransT, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1739 | precompute::apply_tranpose_matrix_right); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'void dolfinx::fem::impl::assemble_vector(std::span<_Type, 4294967295>, const dolfinx::fem::Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]', inlined from 'void dolfinx::fem::assemble_vector(std::span<_Type, 4294967295>, const Form&, std::span, const std::map, std::pair, int> >&) [with T = double; U = double]' at /usr/include/dolfinx/fem/assembler.h:113:24, inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > poisson::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:140:26: /usr/include/dolfinx/fem/assemble_vector_impl.h:1279:20: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 1279 | assemble_vector(b, L, mesh->geometry().dofmap(), mesh->geometry().x(), | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1280 | constants, coefficients); | ~~~~~~~~~~~~~~~~~~~~~~~~ In function 'void dolfinx::fem::set_bc(std::span<_Type, 4294967295>, const std::vector > >&, T) [with T = double; U = double]', inlined from 'std::tuple > > >, std::shared_ptr >, std::function&, const dolfinx::la::Vector > >&)> > poisson::problem(std::shared_ptr >, int)' at /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp:146:25: /usr/include/dolfinx/fem/assembler.h:461:12: note: parameter passing for argument of type 'std::span' changed in GCC 7.1 461 | bc->set(b, scale); | ~~~~~~~^~~~~~~~~~ [100%] Linking CXX executable dolfinx-scaling-test /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx-scaling-test.dir/link.txt --verbose=1 /usr/bin/c++ -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -Wl,-z,relro "CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o" "CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o" -o dolfinx-scaling-test /usr/lib/arm-linux-gnueabihf/libdolfinx_real.so.0.8.0 /usr/lib/arm-linux-gnueabihf/libboost_program_options.so.1.83.0 -lpthread /usr/lib/arm-linux-gnueabihf/libpugixml.so.1.14 /usr/lib/arm-linux-gnueabihf/libbasix.so.0.8.0 /usr/lib/arm-linux-gnueabihf/libboost_timer.so.1.83.0 /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi_cxx.so /usr/lib/arm-linux-gnueabihf/openmpi/lib/libmpi.so /usr/lib/arm-linux-gnueabihf/hdf5/openmpi/libhdf5.so /usr/lib/slepcdir/slepc3.19/arm-linux-gnueabihf-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/lib/libpetsc_real.so make[3]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' [100%] Built target dolfinx-scaling-test make[2]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' debian/tests/run-dolfinx-scaling-test -p /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf ==== elasticity weak scaling (3 processes with ndofs=10000) ==== 2024-05-13 10:21:31.765 ( 0.371s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks 2024-05-13 10:21:31.765 ( 0.371s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph 2024-05-13 10:21:31.766 ( 0.371s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2024-05-13 10:21:31.815 ( 0.421s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph 2024-05-13 10:21:31.849 ( 0.454s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:31.849 ( 0.455s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:31.849 ( 0.455s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 2024-05-13 10:21:31.856 ( 0.462s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) 2024-05-13 10:21:31.857 ( 0.463s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH 2024-05-13 10:21:43.154 ( 11.760s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2024-05-13 10:21:43.176 ( 11.782s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2024-05-13 10:21:43.298 ( 11.904s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2024-05-13 10:21:43.399 ( 12.005s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(118) 15958-467 2024-05-13 10:21:43.413 ( 12.019s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) 2024-05-13 10:21:43.414 ( 12.019s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) 2024-05-13 10:21:43.520 ( 12.126s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2024-05-13 10:21:43.536 ( 12.142s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2024-05-13 10:21:43.654 ( 12.260s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices 2024-05-13 10:21:43.654 ( 12.260s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 2024-05-13 10:21:43.676 ( 12.282s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 2024-05-13 10:21:43.727 ( 12.333s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2024-05-13 10:21:43.731 ( 12.337s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2024-05-13 10:21:43.867 ( 12.473s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:43.888 ( 12.494s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:43.909 ( 12.515s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:43.921 ( 12.527s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:43.960 ( 12.566s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2024-05-13 10:21:43.964 ( 12.570s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2024-05-13 10:21:43.964 ( 12.570s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 2024-05-13 10:21:43.989 ( 12.595s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:43.990 ( 12.595s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:43.990 ( 12.596s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 2024-05-13 10:21:43.991 ( 12.596s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2024-05-13 10:21:43.991 ( 12.597s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17272x4 2024-05-13 10:21:44.002 ( 12.608s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2024-05-13 10:21:44.002 ( 12.608s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2024-05-13 10:21:44.002 ( 12.608s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2024-05-13 10:21:44.003 ( 12.609s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:44.003 ( 12.609s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:44.010 ( 12.616s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 UnitCube (24x19x19) to be refined 0 times 2024-05-13 10:21:44.043 ( 12.649s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:44.043 ( 12.649s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:44.135 ( 12.741s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:44.135 ( 12.741s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:44.139 ( 12.744s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2024-05-13 10:21:44.139 ( 12.745s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. 2024-05-13 10:21:44.142 ( 12.748s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2024-05-13 10:21:44.142 ( 12.748s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17272x4 2024-05-13 10:21:44.153 ( 12.759s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2024-05-13 10:21:44.154 ( 12.759s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2024-05-13 10:21:44.154 ( 12.760s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2024-05-13 10:21:44.158 ( 12.764s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:44.158 ( 12.764s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:44.159 ( 12.765s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2024-05-13 10:21:44.160 ( 12.766s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2024-05-13 10:21:44.160 ( 12.766s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) 2024-05-13 10:21:44.227 ( 12.833s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 216 to 535 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 dolfinx hash: debian_1:0.8.0-6 ufl hash: ea06373d6123e47e4a3c75d92f167503ae508922 petsc version: Petsc Release Version 3.19.6, Sep 28, 2023 Problem type: elasticity Scaling type: weak Num processes: 3 Num cells: 51984 (52 thousand) Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- 2024-05-13 10:21:44.987 ( 13.593s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = -1. -1. -1. Threshold scaling factor for each level not specified = 1. AGG specific options Number of levels to square graph 1 Number smoothing steps 1 Complexity: grid = 1.0646 operator = 1.26121 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 3 MPI processes type: bjacobi number of blocks = 3 Local solver information for first block is in the following KSP and PC objects on rank 0: Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks KSP Object: (mg_coarse_sub_) 1 MPI process type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI process type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.02343 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=228, cols=228, bs=6 package used to perform factorization: petsc total: nonzeros=50328, allocated nonzeros=50328 using I-node routines: found 54 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=228, cols=228, bs=6 total: nonzeros=49176, allocated nonzeros=49176 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 66 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=228, cols=228, bs=6 total: nonzeros=49176, allocated nonzeros=49176 total number of mallocs used during MatSetValues calls=0 using I-node (on process 0) routines: found 66 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.238065, max 2.61872 eigenvalues provided (min 1.14156e-06, max 2.38065) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=1710, cols=1710, bs=6 total: nonzeros=277740, allocated nonzeros=277740 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 162 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.257425, max 2.83167 eigenvalues provided (min 0.0754563, max 2.57425) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3376 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3376 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot --------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 12.250000 12.250000 Build dofmap data | 2 0.015000 0.030000 Build sparsity | 1 0.020000 0.020000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.140000 0.140000 Compute graph partition (SCOTCH) | 1 11.270000 11.270000 Compute local part of mesh dual graph | 2 0.080000 0.160000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.040000 0.040000 Compute-local-to-global links for global/local adjacency list | 1 0.010000 0.010000 Distribute AdjacencyList nodes to destination ranks | 1 0.280000 0.280000 Distribute row-wise data (scalable) | 1 0.030000 0.030000 GPS: create_level_structure | 2 0.005000 0.010000 Gibbs-Poole-Stockmeyer ordering | 1 0.020000 0.020000 Init MPI | 1 0.250000 0.250000 Init PETSc | 1 0.090000 0.090000 Init dofmap from element dofmap | 2 0.010000 0.020000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 1.620000 1.620000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 11.260000 11.260000 SparsityPattern::finalize | 1 0.030000 0.030000 Topology: create | 1 0.540000 0.540000 Topology: determine shared index ownership | 1 0.220000 0.220000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.020000 0.020000 ZZZ Assemble matrix | 1 0.670000 0.670000 ZZZ Assemble vector | 1 0.030000 0.030000 ZZZ Create Mesh | 1 12.290000 12.290000 ZZZ Create RHS function | 1 0.040000 0.040000 ZZZ Create boundary conditions | 1 0.000000 0.000000 ZZZ Create facets and facet->cell connectivity | 1 0.140000 0.140000 ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.040000 0.040000 ZZZ FunctionSpace | 1 0.020000 0.020000 ZZZ Solve | 1 1.630000 1.630000 *** Number of Krylov iterations: 21 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt32a with 3 processors, by pbuilder1 Mon May 13 10:21:46 2024 Using Petsc Release Version 3.19.6, Sep 28, 2023 Max Max/Min Avg Total Time (sec): 1.489e+01 1.001 1.489e+01 Objects: 4.630e+02 1.004 4.617e+02 Flops: 2.233e+08 1.100 2.100e+08 6.299e+08 Flops/sec: 1.500e+07 1.100 1.410e+07 4.231e+07 MPI Msg Count: 8.420e+02 1.040 8.287e+02 2.486e+03 MPI Msg Len (bytes): 6.336e+06 1.393 6.578e+03 1.635e+07 MPI Reductions: 6.560e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 1.4890e+01 100.0% 6.2993e+08 100.0% 2.486e+03 100.0% 6.578e+03 100.0% 6.380e+02 97.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 121 1.0 2.3566e-01 4.4 0.00e+00 0.0 2.1e+02 4.0e+00 1.2e+02 1 0 8 0 18 1 0 8 0 19 0 BuildTwoSidedF 86 1.0 2.3080e-01 4.7 0.00e+00 0.0 1.1e+02 3.9e+04 8.6e+01 1 0 4 25 13 1 0 4 25 13 0 MatMult 217 1.0 3.3775e-01 1.0 1.22e+08 1.1 1.3e+03 5.3e+03 0.0e+00 2 55 52 42 0 2 55 52 42 0 1032 MatMultAdd 44 1.0 7.9586e-02 1.3 1.03e+07 1.1 1.8e+02 1.3e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 370 MatMultTranspose 44 1.0 4.5180e-02 1.1 1.04e+07 1.1 1.8e+02 1.3e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 652 MatSolve 22 0.0 2.9087e-03 0.0 2.21e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 760 MatLUFactorSym 1 1.0 2.7318e-03 58.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 1.2551e-02 3758.9 6.65e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 530 MatConvert 1 1.0 4.7773e-03 7.4 0.00e+00 0.0 1.2e+01 6.8e+02 1.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatScale 4 1.0 1.7635e-03 1.1 4.70e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 758 MatResidual 44 1.0 6.7768e-02 1.0 2.37e+07 1.1 2.6e+02 5.0e+03 0.0e+00 0 11 11 8 0 0 11 11 8 0 993 MatAssemblyBegin 59 1.0 2.7734e-01 3.4 0.00e+00 0.0 1.1e+02 3.9e+04 3.0e+01 1 0 4 25 5 1 0 4 25 5 0 MatAssemblyEnd 59 1.0 1.0309e-01 1.0 9.92e+04 2.0 2.0e+02 3.8e+02 1.2e+02 1 0 8 0 18 1 0 8 0 19 2 MatGetRowIJ 1 0.0 1.2197e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 2 1.0 1.7433e-02 1.0 0.00e+00 0.0 1.4e+01 2.9e+04 3.0e+01 0 0 1 3 5 0 0 1 3 5 0 MatGetOrdering 1 0.0 2.9653e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 6.3368e-02 1.1 1.37e+05 1.0 2.7e+02 6.1e+02 1.0e+02 0 0 11 1 16 0 0 11 1 16 6 MatZeroEntries 3 1.0 2.4150e-04 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 2.5622e-03 1.8 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 MatAXPY 4 1.0 4.0880e-02 1.0 1.13e+05 1.0 2.4e+01 3.8e+02 1.4e+01 0 0 1 0 2 0 0 1 0 2 8 MatTranspose 10 1.0 1.9475e-02 1.0 0.00e+00 0.0 1.2e+02 1.6e+03 3.6e+01 0 0 5 1 5 0 0 5 1 6 0 MatMatMultSym 9 1.0 1.1429e-01 1.2 0.00e+00 0.0 7.5e+01 7.7e+03 3.0e+01 1 0 3 4 5 1 0 3 4 5 0 MatMatMultNum 3 1.0 3.3081e-02 1.0 6.47e+06 1.1 1.5e+01 2.4e+04 3.0e+00 0 3 1 2 0 0 3 1 2 0 555 MatPtAPSymbolic 3 1.0 2.8813e-01 1.0 0.00e+00 0.0 9.9e+01 3.3e+04 2.1e+01 2 0 4 20 3 2 0 4 20 3 0 MatPtAPNumeric 3 1.0 4.6255e-01 1.0 6.12e+07 1.4 6.6e+01 4.0e+04 1.8e+01 3 25 3 16 3 3 25 3 16 3 336 MatGetLocalMat 9 1.0 8.1547e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 9 1.0 1.0339e-02 1.0 0.00e+00 0.0 1.1e+02 3.1e+04 0.0e+00 0 0 5 22 0 0 0 5 22 0 0 VecMDot 20 1.0 7.0853e-03 1.2 1.17e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 3 0 1 0 0 3 492 VecTDot 44 1.0 4.2467e-03 1.6 8.91e+05 1.0 0.0e+00 0.0e+00 4.4e+01 0 0 0 0 7 0 0 0 0 7 622 VecNorm 44 1.0 6.5585e-03 1.2 6.79e+05 1.0 0.0e+00 0.0e+00 4.4e+01 0 0 0 0 7 0 0 0 0 7 308 VecScale 22 1.0 1.8103e-04 1.0 1.17e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1927 VecCopy 136 1.0 1.2451e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 203 1.0 1.0962e-03 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 44 1.0 2.8421e-03 1.9 8.72e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 909 VecAYPX 284 1.0 7.9192e-03 1.2 2.27e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 856 VecAXPBYCZ 88 1.0 3.5586e-03 1.0 2.34e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1960 VecMAXPY 22 1.0 1.8892e-03 1.1 1.38e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2182 VecAssemblyBegin 57 1.0 8.6206e-03 3.8 0.00e+00 0.0 0.0e+00 0.0e+00 5.6e+01 0 0 0 0 9 0 0 0 0 9 0 VecAssemblyEnd 57 1.0 1.8856e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 198 1.0 7.1637e-03 1.6 1.05e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 438 VecScatterBegin 362 1.0 9.2242e-03 1.2 0.00e+00 0.0 1.8e+03 4.2e+03 0.0e+00 0 0 72 46 0 0 0 72 46 0 0 VecScatterEnd 362 1.0 9.1804e-02 1.5 1.24e+04 2.4 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 VecNormalize 22 1.0 4.7227e-03 4.4 3.50e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 3 0 0 0 0 3 222 SFSetGraph 35 1.0 3.1635e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 35 1.0 7.1915e-03 2.4 0.00e+00 0.0 3.1e+02 3.7e+02 3.5e+01 0 0 12 1 5 0 0 12 1 5 0 SFBcastBegin 14 1.0 1.9732e-04 1.2 0.00e+00 0.0 8.4e+01 5.5e+02 0.0e+00 0 0 3 0 0 0 0 3 0 0 0 SFBcastEnd 14 1.0 1.8308e-04 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 4 1.0 1.4933e-04 1.1 0.00e+00 0.0 1.7e+01 5.5e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 SFReduceEnd 4 1.0 7.8233e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 380 1.0 3.1221e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 380 1.0 7.3991e-04 1.1 1.24e+04 2.4 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 38 KSPSetUp 7 1.0 5.3553e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 KSPSolve 1 1.0 4.5741e-01 1.0 1.39e+08 1.1 1.5e+03 4.4e+03 7.0e+01 3 65 62 41 11 3 65 62 41 11 894 KSPGMRESOrthog 20 1.0 8.8740e-03 1.1 2.33e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 3 0 1 0 0 3 786 PCSetUp_GAMG+ 1 1.0 1.1581e+00 1.0 8.19e+07 1.3 9.0e+02 9.4e+03 5.2e+02 8 34 36 52 79 8 34 36 52 81 186 PCGAMGCreateG 2 1.0 1.3247e-01 1.0 4.97e+04 1.0 1.3e+02 1.5e+03 5.0e+01 1 0 5 1 8 1 0 5 1 8 1 GAMG Coarsen 2 1.0 6.5384e-02 1.0 1.37e+05 1.0 2.7e+02 6.1e+02 1.0e+02 0 0 11 1 16 0 0 11 1 16 6 GAMG MIS/Agg 2 1.0 6.3424e-02 1.1 1.37e+05 1.0 2.7e+02 6.1e+02 1.0e+02 0 0 11 1 16 0 0 11 1 16 6 PCGAMGProl 2 1.0 5.5703e-02 1.0 0.00e+00 0.0 1.5e+02 2.2e+03 1.9e+02 0 0 6 2 29 0 0 6 2 29 0 GAMG Prol-col 2 1.0 2.7983e-02 1.0 0.00e+00 0.0 1.3e+02 8.7e+02 1.7e+02 0 0 5 1 26 0 0 5 1 26 0 GAMG Prol-lift 2 1.0 2.7065e-02 1.0 0.00e+00 0.0 2.0e+01 1.1e+04 1.2e+01 0 0 1 1 2 0 0 1 1 2 0 PCGAMGOptProl 2 1.0 1.5911e-01 1.0 2.07e+07 1.1 1.9e+02 7.9e+03 8.2e+01 1 9 8 9 12 1 9 8 9 13 372 GAMG smooth 2 1.0 9.8354e-02 1.0 6.99e+06 1.1 7.2e+01 1.3e+04 2.8e+01 1 3 3 6 4 1 3 3 6 4 202 PCGAMGCreateL 2 1.0 7.4342e-01 1.0 6.10e+07 1.4 1.5e+02 4.2e+04 8.1e+01 5 25 6 38 12 5 25 6 38 13 209 GAMG PtAP 2 1.0 7.2426e-01 1.0 6.10e+07 1.4 1.2e+02 4.8e+04 2.6e+01 5 25 5 36 4 5 25 5 36 4 214 GAMG Reduce 1 1.0 1.9556e-02 1.0 0.00e+00 0.0 2.9e+01 1.5e+04 5.5e+01 0 0 1 3 8 0 0 1 3 9 0 PCGAMG Gal l00 1 1.0 5.0471e-01 1.0 3.57e+07 1.1 6.0e+01 6.2e+04 1.3e+01 3 16 2 23 2 3 16 2 23 2 204 PCGAMG Opt l00 1 1.0 6.6001e-02 1.0 5.02e+06 1.0 3.6e+01 2.1e+04 1.1e+01 0 2 1 5 2 0 2 1 5 2 228 PCGAMG Gal l01 1 1.0 2.1955e-01 1.0 2.53e+07 2.1 6.0e+01 3.5e+04 1.3e+01 1 8 2 13 2 1 8 2 13 2 238 PCGAMG Opt l01 1 1.0 1.3278e-02 1.0 1.46e+06 1.8 3.6e+01 4.7e+03 1.1e+01 0 1 1 1 2 0 1 1 1 2 251 PCSetUp 2 1.0 1.1739e+00 1.0 8.19e+07 1.2 9.0e+02 9.4e+03 5.2e+02 8 35 36 52 79 8 35 36 52 81 189 PCSetUpOnBlocks 22 1.0 1.5944e-02 41.1 6.65e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 417 PCApply 22 1.0 3.9924e-01 1.0 1.20e+08 1.1 1.4e+03 4.0e+03 4.0e+00 3 55 57 35 1 3 55 57 35 1 875 --- Event Stage 1: Unknown ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 12 12 Matrix 106 106 Matrix Coarsen 2 2 Matrix Null Space 1 1 Index Set 75 75 IS L to G Mapping 6 6 Vector 187 187 Star Forest Graph 43 43 Krylov Solver 7 7 Preconditioner 7 7 Viewer 3 2 PetscRandom 2 2 Distributed Mesh 4 4 Discrete System 4 4 Weak Form 4 4 --- Event Stage 1: Unknown ======================================================================================================================== Average time to get PetscTime(): 1.22e-07 Average time for MPI_Barrier(): 3.9556e-06 Average time for zero size MPI_Send(): 3.34633e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=arm-linux-gnueabihf --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lhdf5 -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real --PETSC_ARCH=arm-linux-gnueabihf-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-03-03 21:40:10 on reproducible Machine characteristics: Linux-6.1.0-18-arm64-armv8l-with-glibc2.37 Using PETSc directory: /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/lib -L/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/lib -lpetsc_real -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -L/usr/lib/arm-linux-gnueabihf/openmpi/lib/fortran/gfortran -L/usr/lib/gcc/arm-linux-gnueabihf/13 -L/usr/lib/arm-linux-gnueabihf -L/lib/arm-linux-gnueabihf -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi -lm -lOpenCL -lyaml -lX11 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lgfortran -lm -lz -lgfortran -lm -lgfortran -lgcc_s -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 4 unused database options. They are: Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: weak source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 2024-05-13 10:21:46.707 ( 15.313s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== elasticity strong scaling (3 processes with ndofs=30000) ==== 2024-05-13 10:21:47.269 ( 0.327s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks 2024-05-13 10:21:47.270 ( 0.327s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph 2024-05-13 10:21:47.270 ( 0.327s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2024-05-13 10:21:47.338 ( 0.396s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph 2024-05-13 10:21:47.352 ( 0.409s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:47.356 ( 0.413s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:47.356 ( 0.414s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 2024-05-13 10:21:47.366 ( 0.424s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) 2024-05-13 10:21:47.366 ( 0.424s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH 2024-05-13 10:21:58.046 ( 11.103s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2024-05-13 10:21:58.076 ( 11.134s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2024-05-13 10:21:58.107 ( 11.164s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2024-05-13 10:21:58.150 ( 11.207s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(119) 16674-1336 2024-05-13 10:21:58.155 ( 11.212s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) 2024-05-13 10:21:58.155 ( 11.212s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) 2024-05-13 10:21:58.226 ( 11.283s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2024-05-13 10:21:58.226 ( 11.284s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2024-05-13 10:21:58.242 ( 11.299s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices 2024-05-13 10:21:58.242 ( 11.299s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 2024-05-13 10:21:58.243 ( 11.300s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 2024-05-13 10:21:58.245 ( 11.302s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2024-05-13 10:21:58.256 ( 11.314s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2024-05-13 10:21:58.271 ( 11.328s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:58.277 ( 11.334s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:58.277 ( 11.334s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:58.277 ( 11.334s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:58.281 ( 11.338s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2024-05-13 10:21:58.281 ( 11.338s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2024-05-13 10:21:58.281 ( 11.338s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 2024-05-13 10:21:58.282 ( 11.339s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:58.282 ( 11.339s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:58.282 ( 11.339s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 2024-05-13 10:21:58.283 ( 11.340s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2024-05-13 10:21:58.283 ( 11.340s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17141x4 2024-05-13 10:21:58.290 ( 11.347s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2024-05-13 10:21:58.290 ( 11.347s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2024-05-13 10:21:58.290 ( 11.348s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2024-05-13 10:21:58.309 ( 11.366s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:58.309 ( 11.366s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:58.312 ( 11.369s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 UnitCube (24x19x19) to be refined 0 times 2024-05-13 10:21:58.334 ( 11.391s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:58.350 ( 11.408s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:58.488 ( 11.546s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:58.493 ( 11.550s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:58.495 ( 11.553s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2024-05-13 10:21:58.496 ( 11.553s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. 2024-05-13 10:21:58.507 ( 11.564s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2024-05-13 10:21:58.507 ( 11.564s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17141x4 2024-05-13 10:21:58.518 ( 11.575s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2024-05-13 10:21:58.518 ( 11.576s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2024-05-13 10:21:58.519 ( 11.576s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2024-05-13 10:21:58.529 ( 11.586s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:21:58.529 ( 11.586s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:21:58.530 ( 11.587s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2024-05-13 10:21:58.531 ( 11.588s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2024-05-13 10:21:58.531 ( 11.588s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) 2024-05-13 10:21:58.604 ( 11.661s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 220 to 534 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 dolfinx hash: debian_1:0.8.0-6 ufl hash: ea06373d6123e47e4a3c75d92f167503ae508922 petsc version: Petsc Release Version 3.19.6, Sep 28, 2023 Problem type: elasticity Scaling type: strong Num processes: 3 Num cells: 51984 (52 thousand) Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- 2024-05-13 10:21:59.124 ( 12.181s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = -1. -1. -1. Threshold scaling factor for each level not specified = 1. AGG specific options Number of levels to square graph 1 Number smoothing steps 1 Complexity: grid = 1.0702 operator = 1.28618 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 3 MPI processes type: bjacobi number of blocks = 3 Local solver information for first block is in the following KSP and PC objects on rank 0: Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks KSP Object: (mg_coarse_sub_) 1 MPI process type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI process type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.02939 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=246, cols=246, bs=6 package used to perform factorization: petsc total: nonzeros=57996, allocated nonzeros=57996 using I-node routines: found 56 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=246, cols=246, bs=6 total: nonzeros=56340, allocated nonzeros=56340 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 71 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=246, cols=246, bs=6 total: nonzeros=56340, allocated nonzeros=56340 total number of mallocs used during MatSetValues calls=0 using I-node (on process 0) routines: found 71 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.276135, max 3.03748 eigenvalues provided (min 1.78649e-06, max 2.76135) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=1860, cols=1860, bs=6 total: nonzeros=301824, allocated nonzeros=301824 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 200 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.258043, max 2.83848 eigenvalues provided (min 0.0737482, max 2.58043) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3353 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3353 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot --------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 11.050000 11.050000 Build dofmap data | 2 0.030000 0.060000 Build sparsity | 1 0.020000 0.020000 Compute connectivity 2-0 | 1 0.020000 0.020000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.180000 0.180000 Compute graph partition (SCOTCH) | 1 10.650000 10.650000 Compute local part of mesh dual graph | 2 0.090000 0.180000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.030000 0.030000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute AdjacencyList nodes to destination ranks | 1 0.100000 0.100000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 2 0.002500 0.010000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 Init MPI | 1 0.240000 0.240000 Init PETSc | 1 0.070000 0.070000 Init dofmap from element dofmap | 2 0.015000 0.030000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 4.590000 4.590000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 10.650000 10.650000 SparsityPattern::finalize | 1 0.030000 0.030000 Topology: create | 1 0.130000 0.130000 Topology: determine shared index ownership | 1 0.070000 0.070000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.020000 0.020000 ZZZ Assemble matrix | 1 0.470000 0.470000 ZZZ Assemble vector | 1 0.020000 0.020000 ZZZ Create Mesh | 1 11.070000 11.070000 ZZZ Create RHS function | 1 0.040000 0.040000 ZZZ Create boundary conditions | 1 0.000000 0.000000 ZZZ Create facets and facet->cell connectivity | 1 0.200000 0.200000 ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.020000 0.020000 ZZZ FunctionSpace | 1 0.030000 0.030000 ZZZ Solve | 1 4.590000 4.590000 *** Number of Krylov iterations: 21 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt32a with 3 processors, by pbuilder1 Mon May 13 10:22:03 2024 Using Petsc Release Version 3.19.6, Sep 28, 2023 Max Max/Min Avg Total Time (sec): 1.647e+01 1.000 1.647e+01 Objects: 4.630e+02 1.004 4.617e+02 Flops: 2.192e+08 1.037 2.156e+08 6.469e+08 Flops/sec: 1.331e+07 1.038 1.309e+07 3.928e+07 MPI Msg Count: 8.710e+02 1.041 8.487e+02 2.546e+03 MPI Msg Len (bytes): 6.452e+06 1.323 6.741e+03 1.716e+07 MPI Reductions: 6.570e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 1.6470e+01 100.0% 6.4692e+08 100.0% 2.546e+03 100.0% 6.741e+03 100.0% 6.390e+02 97.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 121 1.0 3.1254e-01 2.7 0.00e+00 0.0 2.2e+02 4.0e+00 1.2e+02 1 0 8 0 18 1 0 8 0 19 0 BuildTwoSidedF 86 1.0 3.0998e-01 2.7 0.00e+00 0.0 1.1e+02 4.0e+04 8.6e+01 1 0 4 26 13 1 0 4 26 13 0 MatMult 217 1.0 1.9419e+00 1.1 1.21e+08 1.1 1.3e+03 5.4e+03 0.0e+00 11 55 51 41 0 11 55 51 41 0 182 MatMultAdd 44 1.0 2.9901e-01 1.3 1.02e+07 1.0 1.8e+02 1.4e+03 0.0e+00 2 5 7 1 0 2 5 7 1 0 101 MatMultTranspose 44 1.0 2.6643e-01 1.1 1.02e+07 1.0 1.8e+02 1.4e+03 0.0e+00 2 5 7 1 0 2 5 7 1 0 113 MatSolve 22 0.0 3.9929e-03 0.0 2.55e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 638 MatLUFactorSym 1 1.0 8.0845e-03 187.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 2.8236e-02 4398.8 8.65e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 306 MatConvert 1 1.0 8.7856e-04 1.2 0.00e+00 0.0 1.2e+01 6.9e+02 1.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatScale 4 1.0 1.7805e-03 1.1 4.65e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 769 MatResidual 44 1.0 3.6596e-01 1.0 2.35e+07 1.1 2.6e+02 5.1e+03 0.0e+00 2 11 10 8 0 2 11 10 8 0 187 MatAssemblyBegin 59 1.0 3.4443e-01 2.3 0.00e+00 0.0 1.1e+02 4.0e+04 3.0e+01 2 0 4 26 5 2 0 4 26 5 0 MatAssemblyEnd 59 1.0 1.6337e-01 1.0 8.92e+04 1.6 2.1e+02 3.8e+02 1.2e+02 1 0 8 0 18 1 0 8 0 19 1 MatGetRowIJ 1 0.0 1.3453e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 2 1.0 6.9573e-02 1.0 0.00e+00 0.0 1.4e+01 3.3e+04 3.0e+01 0 0 1 3 5 0 0 1 3 5 0 MatGetOrdering 1 0.0 3.3943e-04 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 4.5781e-02 1.0 1.38e+05 1.0 2.9e+02 6.0e+02 1.0e+02 0 0 11 1 16 0 0 11 1 16 9 MatZeroEntries 3 1.0 8.1109e-04 4.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 5.4229e-03 4.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 MatAXPY 4 1.0 4.5814e-02 1.1 1.13e+05 1.0 2.4e+01 3.9e+02 1.4e+01 0 0 1 0 2 0 0 1 0 2 7 MatTranspose 10 1.0 2.9515e-02 1.6 0.00e+00 0.0 1.3e+02 1.5e+03 3.6e+01 0 0 5 1 5 0 0 5 1 6 0 MatMatMultSym 9 1.0 1.7654e-01 1.4 0.00e+00 0.0 7.5e+01 7.9e+03 3.0e+01 1 0 3 3 5 1 0 3 3 5 0 MatMatMultNum 3 1.0 7.2939e-02 1.0 6.42e+06 1.1 1.5e+01 2.5e+04 3.0e+00 0 3 1 2 0 0 3 1 2 0 256 MatPtAPSymbolic 3 1.0 6.7090e-01 1.0 0.00e+00 0.0 9.9e+01 3.5e+04 2.1e+01 4 0 4 20 3 4 0 4 20 3 0 MatPtAPNumeric 3 1.0 7.5471e-01 1.0 5.81e+07 1.1 6.6e+01 4.4e+04 1.8e+01 5 25 3 17 3 5 25 3 17 3 217 MatGetLocalMat 9 1.0 1.7205e-02 2.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 9 1.0 3.3439e-02 1.3 0.00e+00 0.0 1.1e+02 3.2e+04 0.0e+00 0 0 4 21 0 0 0 4 21 0 0 VecMDot 20 1.0 1.5293e-02 4.9 1.17e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 3 0 1 0 0 3 229 VecTDot 44 1.0 2.4075e-01 1.9 8.85e+05 1.0 0.0e+00 0.0e+00 4.4e+01 1 0 0 0 7 1 0 0 0 7 11 VecNorm 44 1.0 1.8910e-01 4.0 6.77e+05 1.0 0.0e+00 0.0e+00 4.4e+01 1 0 0 0 7 1 0 0 0 7 11 VecScale 22 1.0 1.8258e-04 1.0 1.17e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1919 VecCopy 136 1.0 1.1772e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 203 1.0 8.3905e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 44 1.0 1.6430e-03 1.3 8.66e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1573 VecAYPX 284 1.0 7.0436e-03 1.2 2.28e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 966 VecAXPBYCZ 88 1.0 3.8015e-03 1.4 2.34e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1844 VecMAXPY 22 1.0 2.0592e-03 1.1 1.39e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2011 VecAssemblyBegin 57 1.0 6.5092e-03 4.4 0.00e+00 0.0 0.0e+00 0.0e+00 5.6e+01 0 0 0 0 9 0 0 0 0 9 0 VecAssemblyEnd 57 1.0 2.2876e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 198 1.0 5.5945e-03 1.2 1.06e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 564 VecScatterBegin 362 1.0 2.1579e-02 2.1 0.00e+00 0.0 1.8e+03 4.2e+03 0.0e+00 0 0 72 45 0 0 0 72 45 0 0 VecScatterEnd 362 1.0 1.9842e+00 1.1 1.45e+04 1.8 0.0e+00 0.0e+00 0.0e+00 12 0 0 0 0 12 0 0 0 0 0 VecNormalize 22 1.0 1.3161e-02 2.6 3.52e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 3 0 0 0 0 3 80 SFSetGraph 35 1.0 3.3377e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 35 1.0 5.0078e-03 1.8 0.00e+00 0.0 3.2e+02 3.7e+02 3.5e+01 0 0 13 1 5 0 0 13 1 5 0 SFBcastBegin 15 1.0 2.1478e-04 1.1 0.00e+00 0.0 9.0e+01 6.2e+02 0.0e+00 0 0 4 0 0 0 0 4 0 0 0 SFBcastEnd 15 1.0 1.5087e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 4 1.0 1.6197e-04 1.1 0.00e+00 0.0 1.8e+01 5.3e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 SFReduceEnd 4 1.0 7.0995e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 381 1.0 7.0972e-03 2.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 381 1.0 1.2122e-03 1.1 1.45e+04 1.8 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 26 KSPSetUp 7 1.0 5.7179e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 KSPSolve 1 1.0 2.6744e+00 1.0 1.44e+08 1.1 1.5e+03 4.5e+03 7.0e+01 16 64 60 40 11 16 64 60 40 11 156 KSPGMRESOrthog 20 1.0 1.7183e-02 3.4 2.34e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 3 0 1 0 0 3 408 PCSetUp_GAMG+ 1 1.0 1.8993e+00 1.0 7.87e+07 1.1 9.6e+02 9.5e+03 5.2e+02 12 35 38 53 79 12 35 38 53 81 118 PCGAMGCreateG 2 1.0 9.3672e-02 1.0 4.94e+04 1.0 1.3e+02 1.5e+03 5.0e+01 1 0 5 1 8 1 0 5 1 8 2 GAMG Coarsen 2 1.0 4.7695e-02 1.0 1.38e+05 1.0 2.9e+02 6.0e+02 1.0e+02 0 0 11 1 16 0 0 11 1 16 9 GAMG MIS/Agg 2 1.0 4.5848e-02 1.0 1.38e+05 1.0 2.9e+02 6.0e+02 1.0e+02 0 0 11 1 16 0 0 11 1 16 9 PCGAMGProl 2 1.0 5.4071e-02 1.0 0.00e+00 0.0 1.9e+02 1.8e+03 1.9e+02 0 0 8 2 29 0 0 8 2 29 0 GAMG Prol-col 2 1.0 2.5736e-02 1.0 0.00e+00 0.0 1.7e+02 7.0e+02 1.7e+02 0 0 7 1 26 0 0 7 1 26 0 GAMG Prol-lift 2 1.0 2.7597e-02 1.0 0.00e+00 0.0 2.4e+01 9.4e+03 1.2e+01 0 0 1 1 2 0 0 1 1 2 0 PCGAMGOptProl 2 1.0 2.4281e-01 1.0 2.06e+07 1.1 1.9e+02 8.2e+03 8.2e+01 1 9 8 9 12 1 9 8 9 13 247 GAMG smooth 2 1.0 1.6787e-01 1.0 6.94e+06 1.1 7.2e+01 1.3e+04 2.8e+01 1 3 3 6 4 1 3 3 6 4 120 PCGAMGCreateL 2 1.0 1.4612e+00 1.0 5.80e+07 1.1 1.5e+02 4.5e+04 8.1e+01 9 25 6 39 12 9 25 6 39 13 112 GAMG PtAP 2 1.0 1.3899e+00 1.0 5.80e+07 1.1 1.2e+02 5.2e+04 2.6e+01 8 25 5 37 4 8 25 5 37 4 117 GAMG Reduce 1 1.0 7.1295e-02 1.0 0.00e+00 0.0 2.9e+01 1.7e+04 5.5e+01 0 0 1 3 8 0 0 1 3 9 0 PCGAMG Gal l00 1 1.0 9.3017e-01 1.0 3.56e+07 1.0 6.0e+01 6.7e+04 1.3e+01 6 16 2 23 2 6 16 2 23 2 114 PCGAMG Opt l00 1 1.0 9.1908e-02 1.0 5.06e+06 1.0 3.6e+01 2.1e+04 1.1e+01 1 2 1 4 2 1 2 1 4 2 163 PCGAMG Gal l01 1 1.0 4.5992e-01 1.0 2.25e+07 1.4 6.0e+01 3.8e+04 1.3e+01 3 9 2 13 2 3 9 2 13 2 125 PCGAMG Opt l01 1 1.0 4.2960e-02 1.0 1.43e+06 1.3 3.6e+01 5.1e+03 1.1e+01 0 1 1 1 2 0 1 1 1 2 84 PCSetUp 2 1.0 1.9361e+00 1.0 7.95e+07 1.1 9.6e+02 9.5e+03 5.2e+02 12 36 38 53 79 12 36 38 53 81 120 PCSetUpOnBlocks 22 1.0 3.6950e-02 111.4 8.65e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 234 PCApply 22 1.0 2.2460e+00 1.1 1.24e+08 1.1 1.4e+03 4.2e+03 4.0e+00 13 55 55 34 1 13 55 55 34 1 159 --- Event Stage 1: Unknown ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 12 12 Matrix 106 106 Matrix Coarsen 2 2 Matrix Null Space 1 1 Index Set 75 75 IS L to G Mapping 6 6 Vector 187 187 Star Forest Graph 43 43 Krylov Solver 7 7 Preconditioner 7 7 Viewer 3 2 PetscRandom 2 2 Distributed Mesh 4 4 Discrete System 4 4 Weak Form 4 4 --- Event Stage 1: Unknown ======================================================================================================================== Average time to get PetscTime(): 1.44e-07 Average time for MPI_Barrier(): 3.3798e-06 Average time for zero size MPI_Send(): 2.61967e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=arm-linux-gnueabihf --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lhdf5 -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real --PETSC_ARCH=arm-linux-gnueabihf-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-03-03 21:40:10 on reproducible Machine characteristics: Linux-6.1.0-18-arm64-armv8l-with-glibc2.37 Using PETSc directory: /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/lib -L/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/lib -lpetsc_real -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -L/usr/lib/arm-linux-gnueabihf/openmpi/lib/fortran/gfortran -L/usr/lib/gcc/arm-linux-gnueabihf/13 -L/usr/lib/arm-linux-gnueabihf -L/lib/arm-linux-gnueabihf -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi -lm -lOpenCL -lyaml -lX11 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lgfortran -lm -lz -lgfortran -lm -lgfortran -lgcc_s -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 4 unused database options. They are: Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: strong source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 2024-05-13 10:22:03.832 ( 16.894s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== poisson weak scaling (3 processes with ndofs=10000) ==== 2024-05-13 10:22:04.379 ( 0.223s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks 2024-05-13 10:22:04.379 ( 0.223s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph 2024-05-13 10:22:04.379 ( 0.223s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2024-05-13 10:22:04.534 ( 0.378s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph 2024-05-13 10:22:04.653 ( 0.497s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:04.653 ( 0.497s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:04.653 ( 0.497s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 2024-05-13 10:22:04.667 ( 0.511s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) 2024-05-13 10:22:04.668 ( 0.511s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH 2024-05-13 10:22:25.603 ( 21.447s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2024-05-13 10:22:25.603 ( 21.447s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2024-05-13 10:22:25.624 ( 21.468s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2024-05-13 10:22:25.779 ( 21.623s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(168) 52194-677 2024-05-13 10:22:25.801 ( 21.644s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) 2024-05-13 10:22:25.801 ( 21.645s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) 2024-05-13 10:22:25.874 ( 21.718s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2024-05-13 10:22:25.875 ( 21.718s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2024-05-13 10:22:25.919 ( 21.763s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices 2024-05-13 10:22:25.919 ( 21.763s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 2024-05-13 10:22:25.919 ( 21.763s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 2024-05-13 10:22:25.935 ( 21.779s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2024-05-13 10:22:25.935 ( 21.779s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2024-05-13 10:22:25.966 ( 21.810s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:25.983 ( 21.827s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:25.983 ( 21.827s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:25.983 ( 21.827s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:26.003 ( 21.847s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2024-05-13 10:22:26.003 ( 21.847s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2024-05-13 10:22:26.003 ( 21.847s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 2024-05-13 10:22:26.004 ( 21.848s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:26.013 ( 21.857s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:26.013 ( 21.857s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 2024-05-13 10:22:26.014 ( 21.858s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2024-05-13 10:22:26.015 ( 21.859s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53201x4 2024-05-13 10:22:26.037 ( 21.881s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2024-05-13 10:22:26.037 ( 21.881s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2024-05-13 10:22:26.038 ( 21.882s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2024-05-13 10:22:26.059 ( 21.902s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:26.059 ( 21.903s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times 2024-05-13 10:22:26.075 ( 21.919s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 2024-05-13 10:22:26.137 ( 21.981s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:26.222 ( 22.066s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:26.496 ( 22.340s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:26.532 ( 22.376s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:26.540 ( 22.384s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2024-05-13 10:22:26.540 ( 22.384s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. 2024-05-13 10:22:26.553 ( 22.397s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2024-05-13 10:22:26.553 ( 22.397s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53201x4 2024-05-13 10:22:26.591 ( 22.435s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2024-05-13 10:22:26.591 ( 22.435s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2024-05-13 10:22:26.593 ( 22.437s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2024-05-13 10:22:26.625 ( 22.469s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:26.625 ( 22.469s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:26.626 ( 22.470s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2024-05-13 10:22:26.628 ( 22.472s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2024-05-13 10:22:26.628 ( 22.472s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) 2024-05-13 10:22:26.733 ( 22.577s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2024-05-13 10:22:26.733 ( 22.577s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) 2024-05-13 10:22:26.842 ( 22.686s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 474 to 1275 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 dolfinx hash: debian_1:0.8.0-6 ufl hash: ea06373d6123e47e4a3c75d92f167503ae508922 petsc version: Petsc Release Version 3.19.6, Sep 28, 2023 Problem type: poisson Scaling type: weak Num processes: 3 Num cells: 162000 (162 thousand) Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- 2024-05-13 10:22:27.249 ( 23.093s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical SpGEMM type cusparse linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=29791, cols=29791 total: nonzeros=424171, allocated nonzeros=424171 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_MAX] Summary of timings | reps wall avg wall tot --------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 21.700000 21.700000 Build dofmap data | 2 0.065000 0.130000 Build sparsity | 1 0.060000 0.060000 Compute connectivity 2-0 | 1 0.010000 0.010000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.480000 0.480000 Compute graph partition (SCOTCH) | 1 20.920000 20.920000 Compute local part of mesh dual graph | 2 0.200000 0.400000 Compute local-to-local map | 1 0.010000 0.010000 Compute non-local part of mesh dual graph | 1 0.140000 0.140000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute AdjacencyList nodes to destination ranks | 1 0.110000 0.110000 Distribute row-wise data (scalable) | 1 0.010000 0.010000 GPS: create_level_structure | 5 0.005000 0.020000 Gibbs-Poole-Stockmeyer ordering | 1 0.040000 0.040000 Init MPI | 1 0.210000 0.210000 Init PETSc | 1 0.020000 0.020000 Init dofmap from element dofmap | 2 0.040000 0.080000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 2.200000 2.200000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 20.920000 20.920000 SparsityPattern::finalize | 1 0.100000 0.100000 Topology: create | 1 0.190000 0.190000 Topology: determine shared index ownership | 1 0.060000 0.060000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.020000 0.020000 ZZZ Assemble | 1 0.600000 0.600000 ZZZ Assemble matrix | 1 0.290000 0.290000 ZZZ Assemble vector | 1 0.070000 0.070000 ZZZ Create Mesh | 1 21.700000 21.700000 ZZZ Create RHS function | 1 0.110000 0.110000 ZZZ Create boundary conditions | 1 0.000000 0.000000 ZZZ Create facets and facet->cell connectivity | 1 0.480000 0.480000 ZZZ FunctionSpace | 1 0.080000 0.080000 ZZZ Solve | 1 2.230000 2.230000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt32a with 3 processors, by pbuilder1 Mon May 13 10:22:29 2024 Using Petsc Release Version 3.19.6, Sep 28, 2023 Max Max/Min Avg Total Time (sec): 2.509e+01 1.000 2.509e+01 Objects: 3.200e+01 1.000 3.200e+01 Flops: 3.524e+06 1.022 3.488e+06 1.047e+07 Flops/sec: 1.404e+05 1.022 1.390e+05 4.170e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 MPI Msg Len (bytes): 1.894e+05 1.191 5.951e+03 5.356e+05 MPI Reductions: 7.000e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 2.5094e+01 100.0% 1.0465e+07 100.0% 9.000e+01 100.0% 5.951e+03 100.0% 5.200e+01 74.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 5 1.0 9.4815e-02 12.6 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 10 0 BuildTwoSidedF 2 1.0 9.4801e-02 12.6 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatMult 7 1.0 2.3026e-02 1.2 1.93e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 249 MatConvert 1 1.0 3.4981e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 MatAssemblyBegin 3 1.0 9.8901e-02 5.1 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatAssemblyEnd 3 1.0 4.2147e-02 1.1 3.78e+03 1.2 1.2e+01 1.4e+03 7.0e+00 0 0 13 3 10 0 0 13 3 13 0 MatGetRowIJ 2 1.0 8.9790e-06 3.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 7.2127e-04 3.3 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 VecTDot 16 1.0 1.2938e-02 1.4 3.20e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 23 0 9 0 0 31 74 VecNorm 8 1.0 3.2084e-02 1.7 1.60e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 15 VecCopy 2 1.0 4.9695e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 9 1.0 1.4889e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 14 1.0 5.6051e-04 1.1 2.80e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 1488 VecAYPX 6 1.0 2.6344e-04 1.1 1.20e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1357 VecScatterBegin 7 1.0 4.0622e-04 1.1 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 VecScatterEnd 7 1.0 1.2272e-02 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 8.8193e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 3.9586e-04 1.0 0.00e+00 0.0 3.6e+01 8.3e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 SFPack 7 1.0 1.4747e-04 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 7 1.0 2.0799e-05 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSetUp 1 1.0 1.3335e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 1.2887e+00 1.0 2.81e+06 1.0 4.2e+01 5.7e+03 2.4e+01 5 80 47 45 34 5 80 47 45 46 6 PCSetUp 1 1.0 9.1705e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 4 0 0 0 3 4 0 0 0 4 0 PCApply 8 1.0 1.2402e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 5 0 0 0 0 5 0 0 0 0 0 --- Event Stage 1: Unknown ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Matrix 4 4 Index Set 6 6 IS L to G Mapping 3 3 Vector 12 12 Star Forest Graph 3 3 Krylov Solver 1 1 Preconditioner 1 1 Viewer 2 1 --- Event Stage 1: Unknown ======================================================================================================================== Average time to get PetscTime(): 1.18e-07 Average time for MPI_Barrier(): 5.5636e-06 Average time for zero size MPI_Send(): 6.07267e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=arm-linux-gnueabihf --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lhdf5 -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real --PETSC_ARCH=arm-linux-gnueabihf-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-03-03 21:40:10 on reproducible Machine characteristics: Linux-6.1.0-18-arm64-armv8l-with-glibc2.37 Using PETSc directory: /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/lib -L/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/lib -lpetsc_real -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -L/usr/lib/arm-linux-gnueabihf/openmpi/lib/fortran/gfortran -L/usr/lib/gcc/arm-linux-gnueabihf/13 -L/usr/lib/arm-linux-gnueabihf -L/lib/arm-linux-gnueabihf -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi -lm -lOpenCL -lyaml -lX11 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lgfortran -lm -lz -lgfortran -lm -lgfortran -lgcc_s -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: weak source: command line 2024-05-13 10:22:29.534 ( 25.377s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== poisson strong scaling (3 processes with ndofs=30000) ==== 2024-05-13 10:22:40.045 ( 0.767s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks 2024-05-13 10:22:40.045 ( 0.767s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph 2024-05-13 10:22:40.045 ( 0.767s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2024-05-13 10:22:40.198 ( 0.921s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph 2024-05-13 10:22:40.463 ( 1.186s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:40.465 ( 1.188s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:40.466 ( 1.188s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 2024-05-13 10:22:40.483 ( 1.206s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) 2024-05-13 10:22:40.483 ( 1.206s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH 2024-05-13 10:22:59.103 ( 19.825s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2024-05-13 10:22:59.103 ( 19.825s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2024-05-13 10:22:59.121 ( 19.844s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2024-05-13 10:22:59.271 ( 19.993s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(162) 49760-3382 2024-05-13 10:22:59.293 ( 20.016s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) 2024-05-13 10:22:59.293 ( 20.016s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) 2024-05-13 10:22:59.328 ( 20.050s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2024-05-13 10:22:59.328 ( 20.050s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2024-05-13 10:22:59.352 ( 20.075s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices 2024-05-13 10:22:59.353 ( 20.075s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 2024-05-13 10:22:59.356 ( 20.078s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 2024-05-13 10:22:59.363 ( 20.086s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2024-05-13 10:22:59.364 ( 20.087s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2024-05-13 10:22:59.390 ( 20.113s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:59.393 ( 20.116s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:59.393 ( 20.116s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:59.394 ( 20.116s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:59.408 ( 20.131s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2024-05-13 10:22:59.409 ( 20.131s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2024-05-13 10:22:59.409 ( 20.131s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 2024-05-13 10:22:59.411 ( 20.133s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:59.411 ( 20.133s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:59.411 ( 20.133s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 2024-05-13 10:22:59.413 ( 20.136s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2024-05-13 10:22:59.413 ( 20.136s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53394x4 2024-05-13 10:22:59.437 ( 20.160s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2024-05-13 10:22:59.437 ( 20.160s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2024-05-13 10:22:59.439 ( 20.161s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2024-05-13 10:22:59.439 ( 20.162s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:59.439 ( 20.162s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times 2024-05-13 10:22:59.448 ( 20.171s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 2024-05-13 10:22:59.513 ( 20.235s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:59.520 ( 20.242s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:59.666 ( 20.388s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:59.666 ( 20.389s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:59.675 ( 20.397s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2024-05-13 10:22:59.675 ( 20.397s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. 2024-05-13 10:22:59.681 ( 20.404s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2024-05-13 10:22:59.682 ( 20.404s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53394x4 2024-05-13 10:22:59.705 ( 20.428s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2024-05-13 10:22:59.706 ( 20.428s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2024-05-13 10:22:59.707 ( 20.430s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2024-05-13 10:22:59.719 ( 20.441s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2024-05-13 10:22:59.719 ( 20.441s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2024-05-13 10:22:59.725 ( 20.447s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2024-05-13 10:22:59.726 ( 20.449s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2024-05-13 10:22:59.726 ( 20.449s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) 2024-05-13 10:22:59.811 ( 20.533s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2024-05-13 10:22:59.811 ( 20.534s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) 2024-05-13 10:22:59.895 ( 20.617s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 469 to 1299 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 dolfinx hash: debian_1:0.8.0-6 ufl hash: ea06373d6123e47e4a3c75d92f167503ae508922 petsc version: Petsc Release Version 3.19.6, Sep 28, 2023 Problem type: poisson Scaling type: strong Num processes: 3 Num cells: 162000 (162 thousand) Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- 2024-05-13 10:23:00.144 ( 20.867s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical SpGEMM type cusparse linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=29791, cols=29791 total: nonzeros=424171, allocated nonzeros=424171 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_MAX] Summary of timings | reps wall avg wall tot --------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 19.420000 19.420000 Build dofmap data | 2 0.035000 0.070000 Build sparsity | 1 0.040000 0.040000 Compute connectivity 2-0 | 1 0.010000 0.010000 Compute dof reordering map | 2 0.005000 0.010000 Compute entities of dim = 2 | 1 0.220000 0.220000 Compute graph partition (SCOTCH) | 1 18.610000 18.610000 Compute local part of mesh dual graph | 2 0.270000 0.540000 Compute local-to-local map | 1 0.010000 0.010000 Compute non-local part of mesh dual graph | 1 0.280000 0.280000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute AdjacencyList nodes to destination ranks | 1 0.050000 0.050000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 2 0.005000 0.020000 Gibbs-Poole-Stockmeyer ordering | 1 0.040000 0.040000 Init MPI | 1 0.210000 0.210000 Init PETSc | 1 0.540000 0.540000 Init dofmap from element dofmap | 2 0.030000 0.060000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 1.360000 1.360000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.010000 0.010000 SCOTCH: call SCOTCH_dgraphPart | 1 18.590000 18.590000 SparsityPattern::finalize | 1 0.060000 0.060000 Topology: create | 1 0.100000 0.100000 Topology: determine shared index ownership | 1 0.030000 0.030000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 ZZZ Assemble | 1 0.420000 0.420000 ZZZ Assemble matrix | 1 0.190000 0.190000 ZZZ Assemble vector | 1 0.040000 0.040000 ZZZ Create Mesh | 1 19.420000 19.420000 ZZZ Create RHS function | 1 0.100000 0.100000 ZZZ Create boundary conditions | 1 0.010000 0.010000 ZZZ Create facets and facet->cell connectivity | 1 0.230000 0.230000 ZZZ FunctionSpace | 1 0.040000 0.040000 ZZZ Solve | 1 1.360000 1.360000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf/dolfinx-scaling-test on a named virt32a with 3 processors, by pbuilder1 Mon May 13 10:23:01 2024 Using Petsc Release Version 3.19.6, Sep 28, 2023 Max Max/Min Avg Total Time (sec): 2.148e+01 1.000 2.148e+01 Objects: 3.200e+01 1.000 3.200e+01 Flops: 3.532e+06 1.022 3.489e+06 1.047e+07 Flops/sec: 1.645e+05 1.022 1.624e+05 4.873e+05 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 MPI Msg Len (bytes): 1.941e+05 1.199 5.906e+03 5.315e+05 MPI Reductions: 7.000e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 2.1476e+01 100.0% 1.0466e+07 100.0% 9.000e+01 100.0% 5.906e+03 100.0% 5.200e+01 74.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 5 1.0 2.2112e-02 51.8 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 10 0 BuildTwoSidedF 2 1.0 2.2080e-02 52.3 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatMult 7 1.0 1.6137e-02 1.0 1.93e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 355 MatConvert 1 1.0 4.7661e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 MatAssemblyBegin 3 1.0 2.5656e-02 6.4 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatAssemblyEnd 3 1.0 1.2971e-02 1.0 3.83e+03 1.2 1.2e+01 1.4e+03 7.0e+00 0 0 13 3 10 0 0 13 3 13 1 MatGetRowIJ 2 1.0 3.7400e-06 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 7.4529e-03 3.1 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 VecTDot 16 1.0 4.0335e-03 3.7 3.22e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 23 0 9 0 0 31 236 VecNorm 8 1.0 3.4829e-02 2.0 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 14 VecCopy 2 1.0 6.0354e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 9 1.0 1.4817e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 14 1.0 5.4039e-04 1.1 2.82e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 1544 VecAYPX 6 1.0 3.2687e-04 1.7 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 1094 VecScatterBegin 7 1.0 4.6052e-04 1.4 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 VecScatterEnd 7 1.0 9.2040e-03 7.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 8.9412e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 3.7667e-04 1.0 0.00e+00 0.0 3.6e+01 8.2e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 SFPack 7 1.0 1.7884e-04 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 7 1.0 1.6558e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSetUp 1 1.0 3.0723e-04 2.6 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 8.1305e-01 1.0 2.82e+06 1.0 4.2e+01 5.7e+03 2.4e+01 4 80 47 45 34 4 80 47 45 46 10 PCSetUp 1 1.0 5.3285e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 2 0 0 0 3 2 0 0 0 4 0 PCApply 8 1.0 7.7442e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 4 0 0 0 0 4 0 0 0 0 0 --- Event Stage 1: Unknown ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Matrix 4 4 Index Set 6 6 IS L to G Mapping 3 3 Vector 12 12 Star Forest Graph 3 3 Krylov Solver 1 1 Preconditioner 1 1 Viewer 2 1 --- Event Stage 1: Unknown ======================================================================================================================== Average time to get PetscTime(): 1.42e-07 Average time for MPI_Barrier(): 7.1114e-06 Average time for zero size MPI_Send(): 9.45233e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=arm-linux-gnueabihf --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-openmpi --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/openmpi --with-hdf5-lib="-L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -lhdf5 -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -lmpi " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real --PETSC_ARCH=arm-linux-gnueabihf-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0" CPPFLAGS="-D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-03-03 21:40:10 on reproducible Machine characteristics: Linux-6.1.0-18-arm64-armv8l-with-glibc2.37 Using PETSc directory: /usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fPIC -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.19.6+dfsg1=. -fstack-protector-strong -fstack-clash-protection -fPIC -ffree-line-length-0 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/openmpi ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/lib -L/usr/lib/petscdir/petsc3.19/arm-linux-gnueabihf-real/lib -lpetsc_real -L/usr/lib/arm-linux-gnueabihf/hdf5/openmpi -L/usr/lib/arm-linux-gnueabihf/openmpi/lib -L/usr/lib/arm-linux-gnueabihf/openmpi/lib/fortran/gfortran -L/usr/lib/gcc/arm-linux-gnueabihf/13 -L/usr/lib/arm-linux-gnueabihf -L/lib/arm-linux-gnueabihf -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-openmpi -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpi -lm -lOpenCL -lyaml -lX11 -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lgfortran -lm -lz -lgfortran -lm -lgfortran -lgcc_s -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: strong source: command line 2024-05-13 10:23:01.610 ( 22.332s) [RANK: 0 ] loguru.cpp:526 INFO| atexit make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake -O--sourcedirectory=src dh_prep -O--buildsystem=cmake -O--sourcedirectory=src dh_auto_install -O--buildsystem=cmake -O--sourcedirectory=src cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.8.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/fenicsx-performance-tests-0.8.0/debian/tmp/usr/bin/dolfinx-scaling-test make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-arm-linux-gnueabihf' dh_install -O--buildsystem=cmake -O--sourcedirectory=src dh_installdocs -O--buildsystem=cmake -O--sourcedirectory=src dh_installchangelogs -O--buildsystem=cmake -O--sourcedirectory=src dh_installman -O--buildsystem=cmake -O--sourcedirectory=src dh_installsystemduser -O--buildsystem=cmake -O--sourcedirectory=src dh_perl -O--buildsystem=cmake -O--sourcedirectory=src dh_link -O--buildsystem=cmake -O--sourcedirectory=src dh_strip_nondeterminism -O--buildsystem=cmake -O--sourcedirectory=src dh_compress -O--buildsystem=cmake -O--sourcedirectory=src dh_fixperms -O--buildsystem=cmake -O--sourcedirectory=src dh_missing -O--buildsystem=cmake -O--sourcedirectory=src dh_dwz -a -O--buildsystem=cmake -O--sourcedirectory=src dh_strip -a -O--buildsystem=cmake -O--sourcedirectory=src dh_makeshlibs -a -O--buildsystem=cmake -O--sourcedirectory=src dh_shlibdeps -a -O--buildsystem=cmake -O--sourcedirectory=src dpkg-shlibdeps: warning: debian/fenicsx-performance-tests/usr/bin/dolfinx-scaling-test contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb -O--buildsystem=cmake -O--sourcedirectory=src dh_gencontrol -O--buildsystem=cmake -O--sourcedirectory=src dh_md5sums -O--buildsystem=cmake -O--sourcedirectory=src dh_builddeb -O--buildsystem=cmake -O--sourcedirectory=src dpkg-deb: building package 'fenicsx-performance-tests' in '../fenicsx-performance-tests_0.8.0-1_armhf.deb'. dpkg-deb: building package 'fenicsx-performance-tests-dbgsym' in '../fenicsx-performance-tests-dbgsym_0.8.0-1_armhf.deb'. dpkg-deb: building package 'fenicsx-performance-tests-source' in '../fenicsx-performance-tests-source_0.8.0-1_all.deb'. dpkg-genbuildinfo --build=binary -O../fenicsx-performance-tests_0.8.0-1_armhf.buildinfo dpkg-genchanges --build=binary -O../fenicsx-performance-tests_0.8.0-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/19987 and its subdirectories I: Current time: Mon May 13 10:23:44 -12 2024 I: pbuilder-time-stamp: 1715639024 Mon May 13 22:24:04 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt64c-armhf-rb.debian.net. Mon May 13 22:24:04 UTC 2024 I: Preparing to do remote build '2' on virt64c-armhf-rb.debian.net. Mon May 13 22:35:37 UTC 2024 I: Deleting $TMPDIR on virt64c-armhf-rb.debian.net. Mon May 13 22:35:40 UTC 2024 I: fenicsx-performance-tests_0.8.0-1_armhf.changes: Format: 1.8 Date: Sat, 04 May 2024 09:00:13 +0000 Source: fenicsx-performance-tests Binary: fenicsx-performance-tests fenicsx-performance-tests-dbgsym fenicsx-performance-tests-source Architecture: armhf all Version: 0.8.0-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Francesco Ballarin Description: fenicsx-performance-tests - Performance test codes for FEniCS/DOLFIN-X (binaries) fenicsx-performance-tests-source - Performance test codes for FEniCS/DOLFIN-X (source) Changes: fenicsx-performance-tests (0.8.0-1) unstable; urgency=medium . * New upstream release, compatible with dolfinx 0.8.0 * Standards-Version: 4.7.0 (routine-update) * Fix Maintainer name of Debian Science team (routine-update) * Require libdolfinx-dev >= 1:0.8~ * Add Francesco Ballarin to uploaders Checksums-Sha1: fdb37ccb5b088a70a4340d3a3d16d5feb9c94468 5665840 fenicsx-performance-tests-dbgsym_0.8.0-1_armhf.deb 5e60f93ac75d427a658cc3ef9ad25bce15cc121a 17352 fenicsx-performance-tests-source_0.8.0-1_all.deb a847464ca5bf310d9b4bf02eb3a1f26b980d81ff 14222 fenicsx-performance-tests_0.8.0-1_armhf.buildinfo 9a5454365bae87c2046681565e3e3fb762cdb9fa 221720 fenicsx-performance-tests_0.8.0-1_armhf.deb Checksums-Sha256: 7221978d874445aa7bb44941a822120a4ed95aadad795ae4c4e7b9e38e640c64 5665840 fenicsx-performance-tests-dbgsym_0.8.0-1_armhf.deb c9315d9163e372470fea12647e9b738a22ccc34bb1e87c1ec650c33a28bf32a9 17352 fenicsx-performance-tests-source_0.8.0-1_all.deb 0121e90721a75c49c07fbf80dad87abc56e3827e3bcfb97c57b22bf5a51e4352 14222 fenicsx-performance-tests_0.8.0-1_armhf.buildinfo 049127eabc58a44b38fb85fcbb56f73d3d140fc230af2545323445f42509fce7 221720 fenicsx-performance-tests_0.8.0-1_armhf.deb Files: cebd205656d0c382e488b9858664b29d 5665840 debug optional fenicsx-performance-tests-dbgsym_0.8.0-1_armhf.deb dddf6626dae7781d1d43bff724911a83 17352 libdevel optional fenicsx-performance-tests-source_0.8.0-1_all.deb 5b1495d1753c2ffd7cb542bab088a57c 14222 libdevel optional fenicsx-performance-tests_0.8.0-1_armhf.buildinfo c56151412da207739c7a1c89304dd5c9 221720 libdevel optional fenicsx-performance-tests_0.8.0-1_armhf.deb Mon May 13 22:35:41 UTC 2024 I: diffoscope 266 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_2-6792.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.YXxyNApB/fenicsx-performance-tests_0.8.0-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.YXxyNApB/fenicsx-performance-tests_0.8.0-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.YXxyNApB/fenicsx-performance-tests_0.8.0-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.YXxyNApB/b1/fenicsx-performance-tests_0.8.0-1_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.YXxyNApB/b2/fenicsx-performance-tests_0.8.0-1_armhf.changes ## close_archive (total time: 0.001s) 0.000s 20 calls diffoscope.comparators.xz.XzContainer 0.000s 14 calls diffoscope.comparators.tar.TarContainer 0.000s 10 calls diffoscope.comparators.deb.DebContainer 0.000s 6 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 401.784s) 209.654s 1049 calls readelf 161.641s 124 calls diff 28.359s 176 calls objdump 1.009s 2 calls objcopy 0.841s 60 calls xz 0.279s 22 calls strings 0.001s 17 calls cmp (internal) ## compare_files (cumulative) (total time: 1000.436s) 193.938s 1 call abc.DotChangesFile 193.900s 2 calls abc.DebFile 193.807s 4 calls abc.XzFile 193.240s 2 calls abc.DebDataTarFile 192.600s 2 calls abc.ElfFile 30.434s 8 calls diffoscope.comparators.elf.ElfCodeSection 1.323s 2 calls diffoscope.comparators.elf.ElfStringSection 1.104s 37 calls diffoscope.comparators.elf.ElfSection 0.058s 2 calls abc.TarFile 0.014s 1 call abc.TextFile 0.010s 1 call diffoscope.comparators.elf.MonkeyPatchedElfSection 0.009s 2 calls abc.Md5sumsFile ## container_extract (total time: 0.979s) 0.837s 20 calls diffoscope.comparators.xz.XzContainer 0.068s 16 calls diffoscope.comparators.deb.DebTarContainer 0.064s 24 calls diffoscope.comparators.deb.DebContainer 0.010s 18 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 0.328s) 0.328s 247 calls linediff ## has_same_content_as (total time: 0.003s) 0.001s 4 calls abc.TextFile 0.000s 4 calls abc.Md5sumsFile 0.000s 2 calls abc.DebDataTarFile 0.000s 3 calls abc.DebFile 0.000s 4 calls abc.XzFile 0.000s 37 calls diffoscope.comparators.elf.ElfSection 0.000s 2 calls abc.ElfFile 0.000s 2 calls abc.TarFile 0.000s 1 call abc.DotChangesFile 0.000s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 8 calls diffoscope.comparators.elf.ElfCodeSection 0.000s 2 calls diffoscope.comparators.elf.ElfStringSection 0.000s 1 call diffoscope.comparators.elf.MonkeyPatchedElfSection ## main (total time: 195.303s) 195.302s 2 calls outputs 0.001s 1 call cleanup ## open_archive (total time: 0.000s) 0.000s 20 calls diffoscope.comparators.xz.XzContainer 0.000s 14 calls diffoscope.comparators.tar.TarContainer 0.000s 10 calls diffoscope.comparators.deb.DebContainer 0.000s 6 calls diffoscope.comparators.deb.DebTarContainer ## output (total time: 0.944s) 0.904s 1 call html 0.024s 1 call text 0.016s 1 call json ## recognizes (total time: 0.777s) 0.425s 900 calls diffoscope.comparators.utils.archive.ArchiveMember 0.222s 1808 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.079s 12 calls diffoscope.comparators.binary.FilesystemFile 0.052s 324 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.133s) 0.133s 71 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 3min 15.662s CPU time consumed: 4min 27.856s Mon May 13 22:38:57 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Mon May 13 22:38:57 UTC 2024 E: fenicsx-performance-tests failed to build reproducibly in unstable on armhf. Mon May 13 22:38:59 UTC 2024 I: Submitting .buildinfo files to external archives: Mon May 13 22:38:59 UTC 2024 I: Submitting 16K b1/fenicsx-performance-tests_0.8.0-1_armhf.buildinfo.asc Mon May 13 22:39:00 UTC 2024 I: Submitting 16K b2/fenicsx-performance-tests_0.8.0-1_armhf.buildinfo.asc Mon May 13 22:39:01 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 13 22:39:01 UTC 2024 I: Done submitting .buildinfo files. Mon May 13 22:39:01 UTC 2024 I: Removing signed fenicsx-performance-tests_0.8.0-1_armhf.buildinfo.asc files: removed './b1/fenicsx-performance-tests_0.8.0-1_armhf.buildinfo.asc' removed './b2/fenicsx-performance-tests_0.8.0-1_armhf.buildinfo.asc'