Sun May 5 07:02:44 UTC 2024 I: starting to build cutesv/unstable/armhf on jenkins on '2024-05-05 07:02' Sun May 5 07:02:44 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_4/4825/console.log Sun May 5 07:02:44 UTC 2024 I: Downloading source for unstable/cutesv=2.1.0-2 --2024-05-05 07:02:44-- http://deb.debian.org/debian/pool/main/c/cutesv/cutesv_2.1.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2006 (2.0K) [text/prs.lines.tag] Saving to: ‘cutesv_2.1.0-2.dsc’ 0K . 100% 217M=0s 2024-05-05 07:02:44 (217 MB/s) - ‘cutesv_2.1.0-2.dsc’ saved [2006/2006] Sun May 5 07:02:44 UTC 2024 I: cutesv_2.1.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cutesv Binary: cutesv Architecture: all Version: 2.1.0-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Steffen Moeller Homepage: https://github.com/tjiangHIT/cuteSV Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/cutesv Vcs-Git: https://salsa.debian.org/med-team/cutesv.git Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools Package-List: cutesv deb science optional arch=all Checksums-Sha1: 0dbb6cabac34214fcbf93764d87e7c56373fabad 1917133 cutesv_2.1.0.orig.tar.gz 4f68dabcc1b4981d3a77707d727c1159a266b39c 7108 cutesv_2.1.0-2.debian.tar.xz Checksums-Sha256: c2d072e8c3c1a2a8ec52abe63ffc796d0e023385e850c4ead6e3a18c14f173d3 1917133 cutesv_2.1.0.orig.tar.gz c525e82c9981aea795a00d5c2d6385d19f10716c1b07ffe283dfc05ec94524c5 7108 cutesv_2.1.0-2.debian.tar.xz Files: 5e9e6ebbd3666f127f73322678bf617c 1917133 cutesv_2.1.0.orig.tar.gz 6fadb5c4bb2fba64927abaa84e480128 7108 cutesv_2.1.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmV3BdkRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGDshAAix8USNkRWhFRSpvT8PUUwKPPEZKUaP4a vYsom4BUzDzAxDlhL/w/PekP09i2FSj9F70ypHL5CijchjG0BjKgH4RfA8SBeGKV pVjERbj5iPemb2twPd6MblJXgiq7yrmBFtz64NhAvOnyUCvTF61f0DcAwBrCBwZ+ 5QW6FtWraki5vqAkvHrk6QUhnuDcVuOKfDunxAf0spoWKmv4J3zvA57zioq3x+nF JsVXWUXjZW10XEY1zXrlCO8THcjuP0ib8PegFJMst+KrAqDasmbGtJmVvYeO8vKs N5MSxUPtSZj+3mATHUq0Vas96/NsPSzl0zZVG39WD5IGSHzE4758Aq5SMa1yGGoN F3nk0grTFWW5Qlx492vRw4dSKmKj61KUhFbqGKXAkrj8x38Bu20OobgB6nxMxPv2 sKsaT1BIjiSyHlW2Reo7TUTqx2WvQMezzUPRErVN8mHgjHmRyUT2zOUeMtihnPG8 tlpLoze5vFiNy6qx2DKvC2hcOuj+UrUgmnRjvzUI2YWW4VglzFwbhQ0yKFG/RE09 /KrTX6vub5lwXU16wqGyu+Vbffc30NoIApIjEdyOwEeCDE4AI8JcWY6JGuJoEqOI lr85YCChXADcc39q4A7CY0vS3BFJ+1zmesgsYgXBs5ChQNgRW/9HgzrjoiSKj9AO OHLAYgQAZMk= =HPOl -----END PGP SIGNATURE----- Sun May 5 07:02:44 UTC 2024 I: Checking whether the package is not for us Sun May 5 07:02:44 UTC 2024 I: Starting 1st build on remote node virt64z-armhf-rb.debian.net. Sun May 5 07:02:44 UTC 2024 I: Preparing to do remote build '1' on virt64z-armhf-rb.debian.net. Sun May 5 07:04:45 UTC 2024 I: Deleting $TMPDIR on virt64z-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat May 4 19:02:52 -12 2024 I: pbuilder-time-stamp: 1714892572 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cutesv_2.1.0-2.dsc] I: copying [./cutesv_2.1.0.orig.tar.gz] I: copying [./cutesv_2.1.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Dec 11 12:51:37 2023 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cutesv_2.1.0-2.dsc: no acceptable signature found dpkg-source: info: extracting cutesv in cutesv-2.1.0 dpkg-source: info: unpacking cutesv_2.1.0.orig.tar.gz dpkg-source: info: unpacking cutesv_2.1.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying PythonPath.patch dpkg-source: info: applying no_install_depends_cython.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2564/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='208fcb797fed48e9b556a8e568d2c7a4' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2564' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vzciP1PY/pbuilderrc_Asz1 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vzciP1PY/b1 --logfile b1/build.log cutesv_2.1.0-2.dsc' SUDO_GID='110' SUDO_UID='103' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt64z 6.1.0-20-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 1 07:43 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2564/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19445 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 24.8 MB of archives. After unpacking 94.3 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf libpython3.11-minimal armhf 3.11.9-1 [805 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.2-1 [83.5 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf python3.11-minimal armhf 3.11.9-1 [1600 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf python3-minimal armhf 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf libreadline8t64 armhf 8.2-4 [145 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf libpython3.11-stdlib armhf 3.11.9-1 [1704 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf python3.11 armhf 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf libpython3-stdlib armhf 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian unstable/main armhf python3 armhf 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.22 [22.4 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.21-14+b1 [157 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-4 [1090 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40-8 [85.6 kB] Get: 22 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.7-2 [33.3 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.12.1-1 [1375 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf autoconf all 2.71-3 [332 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 27 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf autopoint all 0.21-14 [496 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.15.3 [88.0 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-7 [517 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf libsub-override-perl all 0.10-1 [10.6 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 36 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.191-1+b1 [183 kB] Get: 37 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-4+b1 [9070 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.9.14+dfsg-1.3+b3 [598 kB] Get: 40 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.21-14+b1 [1230 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 42 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf debhelper all 13.15.3 [901 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf python3-pkg-resources all 68.1.2-2 [241 kB] Get: 45 http://deb.debian.org/debian unstable/main armhf python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf python3-distutils all 3.12.3-1 [131 kB] Get: 47 http://deb.debian.org/debian unstable/main armhf python3-setuptools all 68.1.2-2 [468 kB] Get: 48 http://deb.debian.org/debian unstable/main armhf dh-python all 6.20240422 [107 kB] Fetched 24.8 MB in 1s (36.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19445 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_armhf.deb ... Unpacking libpython3.11-minimal:armhf (3.11.9-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.2-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_armhf.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:armhf (3.11.9-1) ... Setting up libexpat1:armhf (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19761 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_armhf.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../5-libreadline8t64_8.2-4_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:armhf. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_armhf.deb ... Unpacking libpython3.11-stdlib:armhf (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_armhf.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20753 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.8-1_armhf.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3_armhf.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-14+b1_armhf.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../06-libuchardet0_0.0.8-1+b1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-4_armhf.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.40-8_armhf.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../09-libpipeline1_1.5.7-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.12.1-1_armhf.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:armhf. Preparing to unpack .../23-libelf1t64_0.191-1+b1_armhf.deb ... Unpacking libelf1t64:armhf (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.15-1+b2_armhf.deb ... Unpacking dwz (0.15-1+b2) ... Selecting previously unselected package libicu72:armhf. Preparing to unpack .../25-libicu72_72.1-4+b1_armhf.deb ... Unpacking libicu72:armhf (72.1-4+b1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../26-libxml2_2.9.14+dfsg-1.3+b3_armhf.deb ... Unpacking libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-14+b1_armhf.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../31-python3-pkg-resources_68.1.2-2_all.deb ... Unpacking python3-pkg-resources (68.1.2-2) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../32-python3-lib2to3_3.12.3-1_all.deb ... Unpacking python3-lib2to3 (3.12.3-1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../33-python3-distutils_3.12.3-1_all.deb ... Unpacking python3-distutils (3.12.3-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../34-python3-setuptools_68.1.2-2_all.deb ... Unpacking python3-setuptools (68.1.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../35-dh-python_6.20240422_all.deb ... Unpacking dh-python (6.20240422) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:armhf (1.5.7-2) ... Setting up libicu72:armhf (72.1-4+b1) ... Setting up bsdextrautils (2.40-8) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:armhf (0.191-1+b1) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Sun May 5 07:03:51 UTC 2024. Universal Time is now: Sun May 5 07:03:51 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up netbase (6.4) ... Setting up readline-common (8.2-4) ... Setting up libxml2:armhf (2.9.14+dfsg-1.3+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libreadline8t64:armhf (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:armhf (3.11.9-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3-stdlib:armhf (3.11.8-1) ... Setting up python3.11 (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up dh-python (6.20240422) ... Processing triggers for libc-bin (2.38-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/cutesv-2.1.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cutesv_2.1.0-2_source.changes dpkg-buildpackage: info: source package cutesv dpkg-buildpackage: info: source version 2.1.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/cutesv-2.1.0' dh_auto_clean I: pybuild base:311: python3.11 setup.py clean running clean removing '/build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build' (and everything under it) 'build/bdist.linux-armv7l' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it rm -rf src/cuteSV.egg-info make[1]: Leaving directory '/build/reproducible-path/cutesv-2.1.0' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.11 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/cuteSV_resolveINV.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/cuteSV_Description.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/cuteSV_resolveTRA.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/CommandRunner.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/cuteSV_genotype.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/__init__.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/cuteSV_resolveDUP.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/cuteSV_forcecalling.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/diploid_calling.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV copying src/cuteSV/cuteSV_resolveINDEL.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV creating /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks copying src/benchmarks/sta_venn.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks copying src/benchmarks/eval_trio.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks copying src/benchmarks/__init__.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks copying src/benchmarks/eval_forcecalling.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks copying src/benchmarks/eval_BND.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks copying src/benchmarks/eval_sim.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks copying src/benchmarks/cmp_NA19240.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks copying src/benchmarks/vcf2bedpe.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks copying src/benchmarks/multi_platform.py -> /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks running build_scripts creating build creating build/scripts-3.11 copying and adjusting src/cuteSV/cuteSV -> build/scripts-3.11 changing mode of build/scripts-3.11/cuteSV from 644 to 755 dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build; python3.11 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/cutesv/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/cutesv-2.1.0/debian/cutesv running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_scripts running install_lib creating /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr creating /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib creating /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11 creating /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages creating /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/cuteSV_resolveINV.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/cuteSV_Description.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/cuteSV_resolveTRA.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/CommandRunner.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/cuteSV_genotype.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/__init__.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/cuteSV_resolveDUP.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/cuteSV_forcecalling.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/diploid_calling.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV creating /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/__pycache__ copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/__pycache__ copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/cuteSV/cuteSV_resolveINDEL.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV creating /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/sta_venn.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/eval_trio.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/__init__.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/eval_forcecalling.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/eval_BND.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/eval_sim.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/cmp_NA19240.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks creating /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/__pycache__ copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/__pycache__ copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/vcf2bedpe.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks copying /build/reproducible-path/cutesv-2.1.0/.pybuild/cpython3_3.11/build/benchmarks/multi_platform.py -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/cuteSV_resolveINV.py to cuteSV_resolveINV.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/cuteSV_Description.py to cuteSV_Description.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/cuteSV_resolveTRA.py to cuteSV_resolveTRA.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/CommandRunner.py to CommandRunner.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/cuteSV_genotype.py to cuteSV_genotype.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/cuteSV_resolveDUP.py to cuteSV_resolveDUP.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/cuteSV_forcecalling.py to cuteSV_forcecalling.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/diploid_calling.py to diploid_calling.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV/cuteSV_resolveINDEL.py to cuteSV_resolveINDEL.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/sta_venn.py to sta_venn.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/eval_trio.py to eval_trio.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/eval_forcecalling.py to eval_forcecalling.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/eval_BND.py to eval_BND.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/eval_sim.py to eval_sim.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/cmp_NA19240.py to cmp_NA19240.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/vcf2bedpe.py to vcf2bedpe.cpython-311.pyc byte-compiling /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/benchmarks/multi_platform.py to multi_platform.cpython-311.pyc running install_data copying LICENSE -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/ running install_egg_info running egg_info creating src/cuteSV.egg-info writing src/cuteSV.egg-info/PKG-INFO writing dependency_links to src/cuteSV.egg-info/dependency_links.txt writing requirements to src/cuteSV.egg-info/requires.txt writing top-level names to src/cuteSV.egg-info/top_level.txt writing manifest file 'src/cuteSV.egg-info/SOURCES.txt' reading manifest file 'src/cuteSV.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'src/cuteSV.egg-info/SOURCES.txt' Copying src/cuteSV.egg-info to /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/lib/python3.11/dist-packages/cuteSV-2.1.0.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/bin copying build/scripts-3.11/cuteSV -> /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/bin changing mode of /build/reproducible-path/cutesv-2.1.0/debian/cutesv/usr/bin/cuteSV to 755 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/cutesv-2.1.0' dh_install find debian -name LICENSE -delete make[1]: Leaving directory '/build/reproducible-path/cutesv-2.1.0' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild debian/rules override_dh_installdeb make[1]: Entering directory '/build/reproducible-path/cutesv-2.1.0' # either remove or create non-conflicting location / separate package for testing rm -fr debian/cutesv/usr/lib/python3/dist-packages/benchmarks dh_installdeb make[1]: Leaving directory '/build/reproducible-path/cutesv-2.1.0' dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'cutesv' in '../cutesv_2.1.0-2_all.deb'. dpkg-genbuildinfo --build=binary -O../cutesv_2.1.0-2_armhf.buildinfo dpkg-genchanges --build=binary -O../cutesv_2.1.0-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2564 and its subdirectories I: Current time: Sat May 4 19:04:40 -12 2024 I: pbuilder-time-stamp: 1714892680 Sun May 5 07:04:47 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ff4a-armhf-rb.debian.net. Sun May 5 07:04:47 UTC 2024 I: Preparing to do remote build '2' on ff4a-armhf-rb.debian.net. Sun May 5 07:06:31 UTC 2024 I: Deleting $TMPDIR on ff4a-armhf-rb.debian.net. Sun May 5 07:06:34 UTC 2024 I: cutesv_2.1.0-2_armhf.changes: Format: 1.8 Date: Mon, 11 Dec 2023 13:45:39 +0100 Source: cutesv Binary: cutesv Architecture: all Version: 2.1.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: cutesv - comprehensive discovery of structural variations of genomic seque Closes: 1057985 Changes: cutesv (2.1.0-2) unstable; urgency=medium . * No runtime dependency from cython Closes: #1057985 Checksums-Sha1: 36cf879fe7bf6c40333992af3612fe81587182ff 36872 cutesv_2.1.0-2_all.deb e022e081231f8d706141b7b6abbeb4512fe383c3 5264 cutesv_2.1.0-2_armhf.buildinfo Checksums-Sha256: a2763c15d8db22f795aa5739351fe04959c5045e26cd06bdbb6610558a4c0777 36872 cutesv_2.1.0-2_all.deb c60ee04940c0d7ecc32ca08f7bc1731ae01c068dd1034ccb03f2627474b70763 5264 cutesv_2.1.0-2_armhf.buildinfo Files: 151d9c85cee35c8ad2cc29047ee88d8d 36872 science optional cutesv_2.1.0-2_all.deb a8f3739b5235e0f8a1c6e78ac1586061 5264 science optional cutesv_2.1.0-2_armhf.buildinfo Sun May 5 07:06:35 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_4-4825.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.vzciP1PY/cutesv_2.1.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.vzciP1PY/cutesv_2.1.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.vzciP1PY/cutesv_2.1.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.vzciP1PY/b1/cutesv_2.1.0-2_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.vzciP1PY/b2/cutesv_2.1.0-2_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.378s) 0.378s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.014s) 0.014s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 712ms CPU time consumed: 712ms Sun May 5 07:06:36 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Sun May 5 07:06:36 UTC 2024 I: cutesv from unstable built successfully and reproducibly on armhf. Sun May 5 07:06:37 UTC 2024 I: Submitting .buildinfo files to external archives: Sun May 5 07:06:37 UTC 2024 I: Submitting 8.0K b1/cutesv_2.1.0-2_armhf.buildinfo.asc Sun May 5 07:06:38 UTC 2024 I: Submitting 8.0K b2/cutesv_2.1.0-2_armhf.buildinfo.asc Sun May 5 07:06:38 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun May 5 07:06:38 UTC 2024 I: Done submitting .buildinfo files. Sun May 5 07:06:38 UTC 2024 I: Removing signed cutesv_2.1.0-2_armhf.buildinfo.asc files: removed './b1/cutesv_2.1.0-2_armhf.buildinfo.asc' removed './b2/cutesv_2.1.0-2_armhf.buildinfo.asc'