Sun Nov 10 23:03:32 UTC 2024 I: starting to build cif-tools/unstable/armhf on jenkins on '2024-11-10 23:03' Sun Nov 10 23:03:32 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_34/12382/console.log Sun Nov 10 23:03:32 UTC 2024 I: Downloading source for unstable/cif-tools=1.0.12-4 --2024-11-10 23:03:33-- http://deb.debian.org/debian/pool/main/c/cif-tools/cif-tools_1.0.12-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2121 (2.1K) [text/prs.lines.tag] Saving to: ‘cif-tools_1.0.12-4.dsc’ 0K .. 100% 282M=0s 2024-11-10 23:03:33 (282 MB/s) - ‘cif-tools_1.0.12-4.dsc’ saved [2121/2121] Sun Nov 10 23:03:33 UTC 2024 I: cif-tools_1.0.12-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cif-tools Binary: cif-tools Architecture: any Version: 1.0.12-4 Maintainer: Debian Med Packaging Team Uploaders: Maarten L. Hekkelman Homepage: https://github.com/PDB-REDO/cif-tools Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/cif-tools Vcs-Git: https://salsa.debian.org/med-team/cif-tools.git Testsuite: autopkgtest Testsuite-Triggers: libcifpp-dev Build-Depends: cmake, mrc, debhelper-compat (= 13), libboost-regex-dev, zlib1g-dev, libcifpp-dev (>= 7.0.7-2), libmcfp-dev Package-List: cif-tools deb science optional arch=any Checksums-Sha1: 8ed8e7fc7ab285d035d1d3bddb937b9c02be278a 1828300 cif-tools_1.0.12.orig.tar.gz 9752e45ebc4a57aab0f6638ac0fee1d21710a1d0 3228 cif-tools_1.0.12-4.debian.tar.xz Checksums-Sha256: 5a29cef3557830de859cb01b8f327eb459b341cc085f5bf77dc56a8aabda5288 1828300 cif-tools_1.0.12.orig.tar.gz 93e6cce362267a760d0ef6b1fe2c21c600526a2bd704a8e2b4d3dac71a009fe1 3228 cif-tools_1.0.12-4.debian.tar.xz Files: 1b959b103c86f671aff185538264fe3a 1828300 cif-tools_1.0.12.orig.tar.gz bd576b81453c6454d15ad08f8af2e694 3228 cif-tools_1.0.12-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJKBAEBCgA0FiEEpytoJCJrtAfiS56AWHUD7Hrn7c4FAmcghxsWHG1hYXJ0ZW5A aGVra2VsbWFuLmNvbQAKCRBYdQPseuftzvaSD/9MU3sacQTKr8/emKVaYdEP0fj/ 9Zxzj50zZ5IRDBhgjqnTr13ecIEKXW+DBy8BI9cJnmqP071R6Vdovh2WVzGxqrNe zpjxC+XpP2Vsfo4NMUrfKNMgbwCsDfR4lFD6wxgwEtF2WA3S9m/b1kOvbdUcqVB4 IlRKqNSUUcQole9wOVUPkOmw+Zq0oxwWQNo4M7Wb2cm5iZww0nYMXwhd2z4+EQ8q ej+KNNtyCGjI2ySwF5MxYcxLxE9wmVGBwMR+MbOaWiNKH1Y/fmWv+hGzXI4DMWo7 RU/TCE57c9Kg3Jm+k4EGPTfr8xnNqFY9QAKhuuMbaTyi23jc47nX/UfPtncOpxIw xK334DWYPt3OmtEzsJUBc0GnVG7y6/oJITJ7MZeIKZHsbf0kTn3QOWhHA9qvoUkK W0YqHYCiwZZqjcCm2pq2zVAMRvMKSU0EAGj83vQC6RnWzwVMZLU/1Lu1wOMKzpfo AuBzDO5QpctLO/BtOz/VqvM/oSNuhKF0DaUfJ8wAqxCNot1OMqXTqlMpudpWWcxT 0UqKDgH+Pv6/DOYZuJYSvdGQbqYlRtQpLs7HmD4C2fdPssZQhkckmLMPcAVCEHcC O3YGdmVkS+dSJUm1nfNwttzlUj3vJ8ijis8bUcpiRtxP/qcslbRGJwg81cJYi15N xTZyT2No2s9JXnxWXA== =GKGl -----END PGP SIGNATURE----- Sun Nov 10 23:03:33 UTC 2024 I: Checking whether the package is not for us Sun Nov 10 23:03:33 UTC 2024 I: Starting 1st build on remote node virt32z-armhf-rb.debian.net. Sun Nov 10 23:03:33 UTC 2024 I: Preparing to do remote build '1' on virt32z-armhf-rb.debian.net. Sun Nov 10 23:07:38 UTC 2024 I: Deleting $TMPDIR on virt32z-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Nov 10 11:03:39 -12 2024 I: pbuilder-time-stamp: 1731279819 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cif-tools_1.0.12-4.dsc] I: copying [./cif-tools_1.0.12.orig.tar.gz] I: copying [./cif-tools_1.0.12-4.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Oct 29 06:56:27 2024 gpgv: using RSA key A72B6824226BB407E24B9E80587503EC7AE7EDCE gpgv: issuer "maarten@hekkelman.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cif-tools_1.0.12-4.dsc: no acceptable signature found dpkg-source: info: extracting cif-tools in cif-tools-1.0.12 dpkg-source: info: unpacking cif-tools_1.0.12.orig.tar.gz dpkg-source: info: unpacking cif-tools_1.0.12-4.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/6636/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='4814aa93aa5e4759a691a9263aab9c59' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='6636' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.JZnmu6Xv/pbuilderrc_6uH7 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.JZnmu6Xv/b1 --logfile b1/build.log cif-tools_1.0.12-4.dsc' SUDO_GID='110' SUDO_UID='103' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux virt32z 6.1.0-27-armmp-lpae #1 SMP Debian 6.1.115-1 (2024-11-01) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/6636/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, mrc, debhelper-compat (= 13), libboost-regex-dev, zlib1g-dev, libcifpp-dev (>= 7.0.7-2), libmcfp-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19689 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on mrc; however: Package mrc is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libboost-regex-dev; however: Package libboost-regex-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libcifpp-dev (>= 7.0.7-2); however: Package libcifpp-dev is not installed. pbuilder-satisfydepends-dummy depends on libmcfp-dev; however: Package libmcfp-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libcifpp-data{a} libcifpp-dev{a} libcifpp7{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu-dev{a} libicu72{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libmcfp-dev{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} mrc{a} po-debconf{a} procps{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules libssl3 linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 65 newly installed, 0 to remove and 0 not upgraded. Need to get 54.1 MB of archives. After unpacking 340 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 2 http://deb.debian.org/debian unstable/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 3 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.45-3+b1 [314 kB] Get: 5 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.45-3+b1 [98.5 kB] Get: 6 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.45-3+b1 [42.3 kB] Get: 7 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 8 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Get: 9 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 10 http://deb.debian.org/debian unstable/main armhf bsdextrautils armhf 2.40.2-10 [88.8 kB] Get: 11 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 12 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 13 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 14 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian unstable/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian unstable/main armhf autopoint all 0.22.5-2 [723 kB] Get: 18 http://deb.debian.org/debian unstable/main armhf cmake-data all 3.30.5-1 [2223 kB] Get: 19 http://deb.debian.org/debian unstable/main armhf libicu72 armhf 72.1-5+b1 [9088 kB] Get: 20 http://deb.debian.org/debian unstable/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.1 [604 kB] Get: 21 http://deb.debian.org/debian unstable/main armhf libarchive13t64 armhf 3.7.4-1.1 [306 kB] Get: 22 http://deb.debian.org/debian unstable/main armhf libbrotli1 armhf 1.1.0-2+b5 [296 kB] Get: 23 http://deb.debian.org/debian unstable/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 24 http://deb.debian.org/debian unstable/main armhf libcom-err2 armhf 1.47.1-1+b1 [22.3 kB] Get: 25 http://deb.debian.org/debian unstable/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 26 http://deb.debian.org/debian unstable/main armhf libkeyutils1 armhf 1.6.3-4 [8096 B] Get: 27 http://deb.debian.org/debian unstable/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 28 http://deb.debian.org/debian unstable/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 29 http://deb.debian.org/debian unstable/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8 [18.2 kB] Get: 30 http://deb.debian.org/debian unstable/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8 [50.2 kB] Get: 31 http://deb.debian.org/debian unstable/main armhf libldap-2.5-0 armhf 2.5.18+dfsg-3+b1 [163 kB] Get: 32 http://deb.debian.org/debian unstable/main armhf libnghttp2-14 armhf 1.64.0-1 [62.9 kB] Get: 33 http://deb.debian.org/debian unstable/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB] Get: 34 http://deb.debian.org/debian unstable/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB] Get: 35 http://deb.debian.org/debian unstable/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB] Get: 36 http://deb.debian.org/debian unstable/main armhf libcurl4t64 armhf 8.11.0-1 [303 kB] Get: 37 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.6.4-1 [83.5 kB] Get: 38 http://deb.debian.org/debian unstable/main armhf libjsoncpp26 armhf 1.9.6-2 [70.0 kB] Get: 39 http://deb.debian.org/debian unstable/main armhf librhash1 armhf 1.4.5-1 [143 kB] Get: 40 http://deb.debian.org/debian unstable/main armhf libuv1t64 armhf 1.48.0-7 [134 kB] Get: 41 http://deb.debian.org/debian unstable/main armhf cmake armhf 3.30.5-1 [5365 kB] Get: 42 http://deb.debian.org/debian unstable/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 43 http://deb.debian.org/debian unstable/main armhf libtool all 2.4.7-8 [517 kB] Get: 44 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 47 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 48 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.192-4 [184 kB] Get: 49 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 50 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 51 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 52 http://deb.debian.org/debian unstable/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 53 http://deb.debian.org/debian unstable/main armhf debhelper all 13.20 [915 kB] Get: 54 http://deb.debian.org/debian unstable/main armhf icu-devtools armhf 72.1-5+b1 [187 kB] Get: 55 http://deb.debian.org/debian unstable/main armhf libboost1.83-dev armhf 1.83.0-3.2 [10.6 MB] Get: 56 http://deb.debian.org/debian unstable/main armhf libboost-regex1.83.0 armhf 1.83.0-3.2 [307 kB] Get: 57 http://deb.debian.org/debian unstable/main armhf libicu-dev armhf 72.1-5+b1 [10.1 MB] Get: 58 http://deb.debian.org/debian unstable/main armhf libboost-regex1.83-dev armhf 1.83.0-3.2 [335 kB] Get: 59 http://deb.debian.org/debian unstable/main armhf libboost-regex-dev armhf 1.83.0.2+b2 [3856 B] Get: 60 http://deb.debian.org/debian unstable/main armhf libcifpp-data all 7.0.7-3 [484 kB] Get: 61 http://deb.debian.org/debian unstable/main armhf libcifpp7 armhf 7.0.7-3 [855 kB] Get: 62 http://deb.debian.org/debian unstable/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] Get: 63 http://deb.debian.org/debian unstable/main armhf libcifpp-dev armhf 7.0.7-3 [111 kB] Get: 64 http://deb.debian.org/debian unstable/main armhf libmcfp-dev armhf 1.2.4-1 [16.0 kB] Get: 65 http://deb.debian.org/debian unstable/main armhf mrc armhf 1.3.13-2 [50.8 kB] Fetched 54.1 MB in 1s (54.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19689 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-6_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-6_armhf.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:armhf. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3+b1_armhf.deb ... Unpacking libmagic1t64:armhf (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3+b1_armhf.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.22.5-2_armhf.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../07-libuchardet0_0.0.8-1+b2_armhf.deb ... Unpacking libuchardet0:armhf (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-5_armhf.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.40.2-10_armhf.deb ... Unpacking bsdextrautils (2.40.2-10) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../10-libpipeline1_1.5.8-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.13.0-1_armhf.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-4_armhf.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/cif-tools-1.0.12/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cif-tools_1.0.12-4_source.changes dpkg-buildpackage: info: source package cif-tools dpkg-buildpackage: info: source version 1.0.12-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Maarten L. Hekkelman dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/cif-tools-1.0.12' dh_auto_configure -- -DBUILD_SHARED_LIBS=ON cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DBUILD_SHARED_LIBS=ON .. -- The CXX compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for C++ include filesystem -- Looking for C++ include filesystem - found -- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED -- Performing Test CXX_FILESYSTEM_NO_LINK_NEEDED - Success -- Git hash not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.3.1") -- Configuring done (5.6s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf make[1]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12' dh_auto_build cd obj-arm-linux-gnueabihf && make -j3 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/cif-tools-1.0.12 -B/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/pdb2cif.dir/build.make CMakeFiles/pdb2cif.dir/depend make -f CMakeFiles/mrc-depends-file_pdb2cif.dir/build.make CMakeFiles/mrc-depends-file_pdb2cif.dir/depend make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/cif2pdb.dir/build.make CMakeFiles/cif2pdb.dir/depend cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/mrc-depends-file_pdb2cif.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/mrc-depends-file_pdb2cif.dir/build.make CMakeFiles/mrc-depends-file_pdb2cif.dir/build make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' /usr/bin/mrc -o /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-pdb2cif.dir/rsrc.obj -d /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-pdb2cif.dir/rsrc.d /usr/share/libcifpp/mmcif_ma.dic /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic [ 3%] Generating mrc-pdb2cif.dir/rsrc.obj /usr/bin/mrc -o /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-pdb2cif.dir/rsrc.obj /usr/share/libcifpp/mmcif_ma.dic /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 7%] Generating mrc-cif2pdb.dir/rsrc.obj /usr/bin/mrc -o /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-cif2pdb.dir/rsrc.obj /usr/share/libcifpp/mmcif_ma.dic /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic [ 7%] Built target mrc-depends-file_pdb2cif make -f CMakeFiles/mrc-depends-file_cif2pdb.dir/build.make CMakeFiles/mrc-depends-file_cif2pdb.dir/depend make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/mrc-depends-file_cif2pdb.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/mrc-depends-file_cif2pdb.dir/build.make CMakeFiles/mrc-depends-file_cif2pdb.dir/build make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' /usr/bin/mrc -o /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-cif2pdb.dir/rsrc.obj -d /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-cif2pdb.dir/rsrc.d /usr/share/libcifpp/mmcif_ma.dic /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/pdb2cif.dir/DependInfo.cmake "--color=" [ 7%] Built target mrc-depends-file_cif2pdb cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends 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Consolidate compiler generated dependencies of target pdb2cif make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/pdb2cif.dir/build.make CMakeFiles/pdb2cif.dir/build make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' Dependencies file "mrc-cif2pdb.dir/rsrc.d" is newer than depends file "/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/cif2pdb.dir/compiler_depend.internal". 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cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/cif-diff.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/cif-diff.dir/build.make CMakeFiles/cif-diff.dir/build make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 21%] Building CXX object CMakeFiles/cif-diff.dir/src/cif-diff.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/cif-diff.dir/src/cif-diff.cpp.o -MF CMakeFiles/cif-diff.dir/src/cif-diff.cpp.o.d -o CMakeFiles/cif-diff.dir/src/cif-diff.cpp.o -c /build/reproducible-path/cif-tools-1.0.12/src/cif-diff.cpp [ 25%] Building CXX object CMakeFiles/cif-diff.dir/src/pr-main.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/cif-diff.dir/src/pr-main.cpp.o -MF CMakeFiles/cif-diff.dir/src/pr-main.cpp.o.d -o CMakeFiles/cif-diff.dir/src/pr-main.cpp.o -c /build/reproducible-path/cif-tools-1.0.12/src/pr-main.cpp [ 28%] Building CXX object CMakeFiles/pdb2cif.dir/src/pr-main.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/pdb2cif.dir/src/pr-main.cpp.o -MF CMakeFiles/pdb2cif.dir/src/pr-main.cpp.o.d -o CMakeFiles/pdb2cif.dir/src/pr-main.cpp.o -c /build/reproducible-path/cif-tools-1.0.12/src/pr-main.cpp [ 32%] Building CXX object CMakeFiles/cif2pdb.dir/src/pr-main.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/cif2pdb.dir/src/pr-main.cpp.o -MF CMakeFiles/cif2pdb.dir/src/pr-main.cpp.o.d -o CMakeFiles/cif2pdb.dir/src/pr-main.cpp.o -c /build/reproducible-path/cif-tools-1.0.12/src/pr-main.cpp [ 35%] Linking CXX executable cif-diff /usr/bin/cmake -E cmake_link_script CMakeFiles/cif-diff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/cif-diff.dir/src/cif-diff.cpp.o" "CMakeFiles/cif-diff.dir/src/pr-main.cpp.o" "mrc-cif-diff.dir/rsrc.obj" -o cif-diff /usr/lib/arm-linux-gnueabihf/libcifpp.so.7.0.7 /usr/lib/arm-linux-gnueabihf/libz.so make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 35%] Built target cif-diff make -f CMakeFiles/mrc-depends-file_cif-diff.dir/build.make CMakeFiles/mrc-depends-file_cif-diff.dir/depend make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf 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'/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 39%] Generating mrc-cif-grep.dir/rsrc.obj /usr/bin/mrc -o /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-cif-grep.dir/rsrc.obj /usr/share/libcifpp/mmcif_ma.dic /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/cif-grep.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/cif-grep.dir/build.make CMakeFiles/cif-grep.dir/build make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 42%] Building CXX object CMakeFiles/cif-grep.dir/src/cif-grep.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/cif-grep.dir/src/cif-grep.cpp.o -MF CMakeFiles/cif-grep.dir/src/cif-grep.cpp.o.d -o CMakeFiles/cif-grep.dir/src/cif-grep.cpp.o -c /build/reproducible-path/cif-tools-1.0.12/src/cif-grep.cpp [ 46%] Linking CXX executable pdb2cif /usr/bin/cmake -E cmake_link_script CMakeFiles/pdb2cif.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now CMakeFiles/pdb2cif.dir/src/pdb2cif.cpp.o "CMakeFiles/pdb2cif.dir/src/pr-main.cpp.o" "mrc-pdb2cif.dir/rsrc.obj" -o pdb2cif /usr/lib/arm-linux-gnueabihf/libcifpp.so.7.0.7 /usr/lib/arm-linux-gnueabihf/libz.so make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 46%] Built target pdb2cif make -f CMakeFiles/mrc-depends-file_cif-grep.dir/build.make CMakeFiles/mrc-depends-file_cif-grep.dir/depend make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/mrc-depends-file_cif-grep.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/mrc-depends-file_cif-grep.dir/build.make CMakeFiles/mrc-depends-file_cif-grep.dir/build make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' /usr/bin/mrc -o /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-cif-grep.dir/rsrc.obj -d /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-cif-grep.dir/rsrc.d /usr/share/libcifpp/mmcif_ma.dic /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 46%] Built target mrc-depends-file_cif-grep make -f CMakeFiles/cif-merge.dir/build.make CMakeFiles/cif-merge.dir/depend make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 50%] Generating mrc-cif-merge.dir/rsrc.obj /usr/bin/mrc -o /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-cif-merge.dir/rsrc.obj /usr/share/libcifpp/mmcif_ma.dic /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/cif-merge.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/cif-merge.dir/build.make CMakeFiles/cif-merge.dir/build make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 53%] Building CXX object CMakeFiles/cif-merge.dir/src/cif-merge.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/cif-merge.dir/src/cif-merge.cpp.o -MF CMakeFiles/cif-merge.dir/src/cif-merge.cpp.o.d -o CMakeFiles/cif-merge.dir/src/cif-merge.cpp.o -c /build/reproducible-path/cif-tools-1.0.12/src/cif-merge.cpp [ 57%] Linking CXX executable cif2pdb /usr/bin/cmake -E cmake_link_script CMakeFiles/cif2pdb.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now CMakeFiles/cif2pdb.dir/src/cif2pdb.cpp.o "CMakeFiles/cif2pdb.dir/src/pr-main.cpp.o" "mrc-cif2pdb.dir/rsrc.obj" -o cif2pdb /usr/lib/arm-linux-gnueabihf/libcifpp.so.7.0.7 /usr/lib/arm-linux-gnueabihf/libz.so make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 57%] Built target cif2pdb make -f CMakeFiles/mrc-depends-file_cif-merge.dir/build.make CMakeFiles/mrc-depends-file_cif-merge.dir/depend make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/mrc-depends-file_cif-merge.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' make -f CMakeFiles/mrc-depends-file_cif-merge.dir/build.make CMakeFiles/mrc-depends-file_cif-merge.dir/build make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' /usr/bin/mrc -o /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-cif-merge.dir/rsrc.obj -d /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/mrc-cif-merge.dir/rsrc.d 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CMakeFiles/cif-merge.dir/src/pr-main.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/cif-merge.dir/src/pr-main.cpp.o -MF CMakeFiles/cif-merge.dir/src/pr-main.cpp.o.d -o CMakeFiles/cif-merge.dir/src/pr-main.cpp.o -c /build/reproducible-path/cif-tools-1.0.12/src/pr-main.cpp [ 75%] Linking CXX executable cif-validate /usr/bin/cmake -E cmake_link_script CMakeFiles/cif-validate.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/cif-validate.dir/src/cif-validate.cpp.o" "CMakeFiles/cif-validate.dir/src/pr-main.cpp.o" "mrc-cif-validate.dir/rsrc.obj" -o cif-validate /usr/lib/arm-linux-gnueabihf/libcifpp.so.7.0.7 /usr/lib/arm-linux-gnueabihf/libz.so [ 78%] Building CXX object CMakeFiles/cif-grep.dir/src/pr-main.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/cif-grep.dir/src/pr-main.cpp.o -MF CMakeFiles/cif-grep.dir/src/pr-main.cpp.o.d -o CMakeFiles/cif-grep.dir/src/pr-main.cpp.o -c /build/reproducible-path/cif-tools-1.0.12/src/pr-main.cpp make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 78%] Built target cif-validate make -f CMakeFiles/mrc-depends-file_cif-validate.dir/build.make CMakeFiles/mrc-depends-file_cif-validate.dir/depend make[3]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' cd /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12 /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles/mrc-depends-file_cif-validate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory 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-DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -DUSE_RSRC -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/mmCQL.dir/src/mmCQL.cpp.o -MF CMakeFiles/mmCQL.dir/src/mmCQL.cpp.o.d -o CMakeFiles/mmCQL.dir/src/mmCQL.cpp.o -c /build/reproducible-path/cif-tools-1.0.12/src/mmCQL.cpp [ 89%] Linking CXX executable cif-merge /usr/bin/cmake -E cmake_link_script CMakeFiles/cif-merge.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra 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-Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now "CMakeFiles/cif-grep.dir/src/cif-grep.cpp.o" "CMakeFiles/cif-grep.dir/src/pr-main.cpp.o" "mrc-cif-grep.dir/rsrc.obj" -o cif-grep /usr/lib/arm-linux-gnueabihf/libcifpp.so.7.0.7 /usr/lib/arm-linux-gnueabihf/libz.so make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [ 96%] Built target cif-grep [100%] Linking CXX executable mmCQL /usr/bin/cmake -E cmake_link_script CMakeFiles/mmCQL.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/cif-tools-1.0.12=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro -Wl,-z,now CMakeFiles/mmCQL.dir/src/mmCQL.cpp.o "CMakeFiles/mmCQL.dir/src/pr-main.cpp.o" "mrc-mmCQL.dir/rsrc.obj" -o mmCQL /usr/lib/arm-linux-gnueabihf/libcifpp.so.7.0.7 /usr/lib/arm-linux-gnueabihf/libz.so make[3]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' [100%] Built target mmCQL make[2]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/cif-tools/ cd obj-arm-linux-gnueabihf && make -j3 install DESTDIR=/build/reproducible-path/cif-tools-1.0.12/debian/cif-tools AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/cif-tools-1.0.12/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/cif-tools-1.0.12 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dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: debian/cif-tools/usr/bin/cif-validate contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cif-tools/usr/bin/mmCQL contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cif-tools/usr/bin/cif-grep contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cif-tools/usr/bin/pdb2cif contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cif-tools/usr/bin/cif-diff contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cif-tools/usr/bin/cif2pdb contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: debian/cif-tools/usr/bin/cif-merge contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'cif-tools' in '../cif-tools_1.0.12-4_armhf.deb'. dpkg-deb: building package 'cif-tools-dbgsym' in '../cif-tools-dbgsym_1.0.12-4_armhf.deb'. dpkg-genbuildinfo --build=binary -O../cif-tools_1.0.12-4_armhf.buildinfo dpkg-genchanges --build=binary -O../cif-tools_1.0.12-4_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/6636 and its subdirectories I: Current time: Sun Nov 10 11:07:24 -12 2024 I: pbuilder-time-stamp: 1731280044 Sun Nov 10 23:07:40 UTC 2024 I: 1st build successful. Starting 2nd build on remote node virt64a-armhf-rb.debian.net. Sun Nov 10 23:07:40 UTC 2024 I: Preparing to do remote build '2' on virt64a-armhf-rb.debian.net. Sun Nov 10 23:11:23 UTC 2024 I: Deleting $TMPDIR on virt64a-armhf-rb.debian.net. Sun Nov 10 23:11:25 UTC 2024 I: cif-tools_1.0.12-4_armhf.changes: Format: 1.8 Date: Tue, 29 Oct 2024 07:42:14 +0100 Source: cif-tools Binary: cif-tools cif-tools-dbgsym Architecture: armhf Version: 1.0.12-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Maarten L. Hekkelman Description: cif-tools - Suite of tools to manipulate, validate and query mmCIF files Closes: 1043897 Changes: cif-tools (1.0.12-4) unstable; urgency=medium . * Closes: #1043897 Checksums-Sha1: 4fdef4bcf429b799c3e6938b64d2846cb2d78113 4419728 cif-tools-dbgsym_1.0.12-4_armhf.deb 3fa2167957e8dc429311a249312bcbf67e57005b 6179 cif-tools_1.0.12-4_armhf.buildinfo b625ae50661c63f2053b7640f873730831a09ad3 2364960 cif-tools_1.0.12-4_armhf.deb Checksums-Sha256: 7d1d84ecda488fa680846c4a7ef126cca61a34c5a87118da47643e64d085a288 4419728 cif-tools-dbgsym_1.0.12-4_armhf.deb c752b3c8ab1b5d68bb078fe90d36749c7e9787fd279d01c6e2c68428ea064313 6179 cif-tools_1.0.12-4_armhf.buildinfo 580bcf932e1563c94e7aefc4398ea3b8e5d6bca9c74b564f76829d08a1c75537 2364960 cif-tools_1.0.12-4_armhf.deb Files: 4374afad06497f46b61409c13269fc83 4419728 debug optional cif-tools-dbgsym_1.0.12-4_armhf.deb 1aa249b01f992d1c00ea2dc54fec7103 6179 science optional cif-tools_1.0.12-4_armhf.buildinfo c3980ce3f9a3b821cc843b339ba17ade 2364960 science optional cif-tools_1.0.12-4_armhf.deb Sun Nov 10 23:11:26 UTC 2024 I: diffoscope 283 will be used to compare the two builds: Running as unit: rb-diffoscope-armhf_34-12382.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.JZnmu6Xv/cif-tools_1.0.12-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.JZnmu6Xv/cif-tools_1.0.12-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.JZnmu6Xv/cif-tools_1.0.12-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.JZnmu6Xv/b1/cif-tools_1.0.12-4_armhf.changes /srv/reproducible-results/rbuild-debian/r-b-build.JZnmu6Xv/b2/cif-tools_1.0.12-4_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.441s) 0.441s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.086s) 0.086s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 765ms CPU time consumed: 766ms Sun Nov 10 23:11:27 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Sun Nov 10 23:11:27 UTC 2024 I: cif-tools from unstable built successfully and reproducibly on armhf. Sun Nov 10 23:11:29 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Nov 10 23:11:29 UTC 2024 I: Submitting 8.0K b1/cif-tools_1.0.12-4_armhf.buildinfo.asc Sun Nov 10 23:11:29 UTC 2024 I: Submitting 8.0K b2/cif-tools_1.0.12-4_armhf.buildinfo.asc Sun Nov 10 23:11:30 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Nov 10 23:11:30 UTC 2024 I: Done submitting .buildinfo files. Sun Nov 10 23:11:30 UTC 2024 I: Removing signed cif-tools_1.0.12-4_armhf.buildinfo.asc files: removed './b1/cif-tools_1.0.12-4_armhf.buildinfo.asc' removed './b2/cif-tools_1.0.12-4_armhf.buildinfo.asc'