Sun Oct 12 01:07:46 UTC 2025 I: starting to build python-bx/unstable/arm64 on jenkins on '2025-10-12 01:07' Sun Oct 12 01:07:46 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_12/125098/console.log Sun Oct 12 01:07:46 UTC 2025 I: Downloading source for unstable/python-bx=0.13.0-2 --2025-10-12 01:07:46-- http://deb.debian.org/debian/pool/main/p/python-bx/python-bx_0.13.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1916 (1.9K) [text/prs.lines.tag] Saving to: ‘python-bx_0.13.0-2.dsc’ 0K . 100% 221M=0s 2025-10-12 01:07:46 (221 MB/s) - ‘python-bx_0.13.0-2.dsc’ saved [1916/1916] Sun Oct 12 01:07:46 UTC 2025 I: python-bx_0.13.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-bx Binary: python3-bx Architecture: any Version: 0.13.0-2 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Michael R. Crusoe Homepage: https://github.com/bxlab/bx-python Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/python-bx Vcs-Git: https://salsa.debian.org/med-team/python-bx.git Testsuite: autopkgtest-pkg-pybuild Build-Depends: debhelper-compat (= 13), dh-sequence-python3, zlib1g-dev, python3-setuptools, pybuild-plugin-pyproject, python3-all-dev:any, python3-lzo, python3-pyparsing , python3-pytest , python3-pytest-cython , python3-numpy, python3-numpy-dev, cython3 Package-List: python3-bx deb python optional arch=any Checksums-Sha1: bb4f1db8e7b49d900539bb64d9ab0ad5f4c43d32 1611987 python-bx_0.13.0.orig.tar.gz fd207e8d605acf0e17a4822dffcac9da383a5666 13876 python-bx_0.13.0-2.debian.tar.xz Checksums-Sha256: 90016460f4799758dc2891cf3209fbbbe41c9e7221a49821d958089c47bbbe33 1611987 python-bx_0.13.0.orig.tar.gz d50d95cd6cb3a7a49ad2785ab0b9da74861f555c9003d3b3e2867c17b0949a1a 13876 python-bx_0.13.0-2.debian.tar.xz Files: f1b5b00c996f8a4ff38794ab99b67ccf 1611987 python-bx_0.13.0.orig.tar.gz d12ce573413a6679cb52d9e22d9c60ae 13876 python-bx_0.13.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE1Uw7+v+wQt44LaXXQc5/C58bizIFAmjj6aEACgkQQc5/C58b izKj7ggAlscTaR2jWg9wQOSAZNRSks/X8f784NmNkMhrZ8AzcMAxdxcEmbX570Ec 1jeH63c0vHNpkoD5og0DNXf3Sr44BngewDh4tg+qig/m7U2CjjhjprspndU63Ezz tUxBvREzceXfazS5RFO6tSbHX98l7KmGStJYFxm0vOTTorFLjMPMxnKeFYcVPZ/N XJRrIPix/oFZCQw5Hx/Sk8ybWcygDIu18VWC5LJVTfk6WOrRcCE5bDUsUYqv9lIF GyH+1e/veXf8KoraCZkwxmX7jQtl8MnJ5dfbc+ZKbkZYfpQjIRM3r69IWE9FDnum rRfa6LsBqvKMsRdx4kdoaTULZ+tUTw== =O7zH -----END PGP SIGNATURE----- Sun Oct 12 01:07:46 UTC 2025 I: Checking whether the package is not for us Sun Oct 12 01:07:46 UTC 2025 I: Starting 1st build on remote node codethink04-arm64.debian.net. Sun Oct 12 01:07:46 UTC 2025 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Sun Oct 12 01:10:13 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Oct 11 13:07:48 -12 2025 I: pbuilder-time-stamp: 1760231268 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-bx_0.13.0-2.dsc] I: copying [./python-bx_0.13.0.orig.tar.gz] I: copying [./python-bx_0.13.0-2.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./python-bx_0.13.0-2.dsc: no acceptable signature found dpkg-source: info: extracting python-bx in python-bx-0.13.0 dpkg-source: info: unpacking python-bx_0.13.0.orig.tar.gz dpkg-source: info: unpacking python-bx_0.13.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling dpkg-source: info: applying shebang.patch dpkg-source: info: applying fix_BIN_OFFSETS_MAX I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1123429/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='786ae08d605e497c98403498124c5871' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1123429' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.gfWteM5x/pbuilderrc_I9dg --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.gfWteM5x/b1 --logfile b1/build.log python-bx_0.13.0-2.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1123429/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, zlib1g-dev, python3-setuptools, pybuild-plugin-pyproject, python3-all-dev:any, python3-lzo, python3-pyparsing, python3-pytest, python3-pytest-cython, python3-numpy, python3-numpy-dev, cython3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19958 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev:any. pbuilder-satisfydepends-dummy depends on python3-lzo; however: Package python3-lzo is not installed. pbuilder-satisfydepends-dummy depends on python3-pyparsing; however: Package python3-pyparsing is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-cython; however: Package python3-pytest-cython is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy-dev; however: Package python3-numpy-dev is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libjs-sphinxdoc{a} liblapack3{a} liblzo2-2{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2-16{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-all-dev{a} python3-autocommand{a} python3-build{a} python3-dev{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-lzo{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pytest{a} python3-pytest-cython{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-wheel{a} python3-zipp{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 86 newly installed, 0 to remove and 0 not upgraded. Need to get 37.2 MB of archives. After unpacking 163 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.3-1 [96.5 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.8-1 [858 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.8-1 [2062 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.8-1 [1899 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.8-1 [765 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 python3-numpy-dev arm64 1:2.3.3+ds-3 [135 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.1-7 [135 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 15.2.0-4 [371 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.1-7 [1846 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:2.3.3+ds-3 [3589 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.20-2 [315 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.17-4 [862 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 cython3 arm64 3.0.11+dfsg-2+b1 [2255 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-5 [540 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 42 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-2 [100 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libxml2-16 arm64 2.14.6+dfsg-0.1 [601 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.28 [941 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20250414 [116 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.7.3-1 [150 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 8.2.3-7 [27.6 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3+b1 [49.6 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libpython3.13 arm64 3.13.8-1 [2057 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 libpython3.13-dev arm64 3.13.8-1 [5020 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libpython3-dev arm64 3.13.7-1 [10.5 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libpython3-all-dev arm64 3.13.7-1 [1068 B] Get: 59 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 25.0-1 [56.6 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 python3-wheel all 0.46.1-2 [21.7 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 python3-build all 1.2.2-4 [36.2 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 pybuild-plugin-pyproject all 6.20250414 [11.8 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.7-1 [1044 B] Get: 66 http://deb.debian.org/debian unstable/main arm64 python3.13-dev arm64 3.13.8-1 [505 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 python3-dev arm64 3.13.7-1 [26.1 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 python3-all-dev arm64 3.13.7-1 [1068 B] Get: 69 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.8.0-1 [71.7 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.5.0-1 [33.0 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 75 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 81 http://deb.debian.org/debian unstable/main arm64 python3-lzo arm64 1.15-2+b4 [8896 B] Get: 82 http://deb.debian.org/debian unstable/main arm64 python3-pluggy all 1.6.0-1 [27.1 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.4.2-1 [266 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 python3-pytest-cython all 0.3.1-1 [8032 B] Fetched 37.2 MB in 0s (110 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19958 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.3-1_arm64.deb ... Unpacking libexpat1:arm64 (2.7.3-1) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.8-1_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.8-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.8-1_arm64.deb ... Unpacking python3.13-minimal (3.13.8-1) ... Setting up libpython3.13-minimal:arm64 (3.13.8-1) ... Setting up libexpat1:arm64 (2.7.3-1) ... Setting up python3.13-minimal (3.13.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20292 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.7-1_arm64.deb ... Unpacking python3-minimal (3.13.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../4-libffi8_3.5.2-2_arm64.deb ... Unpacking libffi8:arm64 (3.5.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.3-3_all.deb ... Unpacking readline-common (8.3-3) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../6-libreadline8t64_8.3-3_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.8-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.8-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.8-1_arm64.deb ... Unpacking python3.13 (3.13.8-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../9-libpython3-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.13.7-1) ... Setting up python3-minimal (3.13.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21307 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.7-1_arm64.deb ... Unpacking python3 (3.13.7-1) ... Selecting previously unselected package python3-numpy-dev:arm64. Preparing to unpack .../01-python3-numpy-dev_1%3a2.3.3+ds-3_arm64.deb ... Unpacking python3-numpy-dev:arm64 (1:2.3.3+ds-3) ... Selecting previously unselected package libblas3:arm64. Preparing to unpack .../02-libblas3_3.12.1-7_arm64.deb ... Unpacking libblas3:arm64 (3.12.1-7) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../03-libgfortran5_15.2.0-4_arm64.deb ... Unpacking libgfortran5:arm64 (15.2.0-4) ... Selecting previously unselected package liblapack3:arm64. Preparing to unpack .../04-liblapack3_3.12.1-7_arm64.deb ... Unpacking liblapack3:arm64 (3.12.1-7) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../05-python3-numpy_1%3a2.3.3+ds-3_arm64.deb ... Unpacking python3-numpy (1:2.3.3+ds-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../08-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../09-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../10-gettext-base_0.23.1-2+b1_arm64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../11-libuchardet0_0.0.8-2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../12-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../13-bsdextrautils_2.41.2-4_arm64.deb ... Unpacking bsdextrautils (2.41.2-4) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../14-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../15-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../16-m4_1.4.20-2_arm64.deb ... Unpacking m4 (1.4.20-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../17-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../18-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../19-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../20-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package cython3. Preparing to unpack .../21-cython3_3.0.11+dfsg-2+b1_arm64.deb ... Unpacking cython3 (3.0.11+dfsg-2+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../22-libdebhelper-perl_13.28_all.deb ... Unpacking libdebhelper-perl (13.28) ... Selecting previously unselected package libtool. Preparing to unpack .../23-libtool_2.5.4-5_all.deb ... Unpacking libtool (2.5.4-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../24-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../25-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../26-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../27-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../28-libelf1t64_0.193-3_arm64.deb ... Unpacking libelf1t64:arm64 (0.193-3) ... Selecting previously unselected package dwz. Preparing to unpack .../29-dwz_0.16-2_arm64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../30-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../31-libxml2-16_2.14.6+dfsg-0.1_arm64.deb ... Unpacking libxml2-16:arm64 (2.14.6+dfsg-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../32-gettext_0.23.1-2+b1_arm64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../33-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../34-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../35-debhelper_13.28_all.deb ... Unpacking debhelper (13.28) ... Selecting previously unselected package dh-python. Preparing to unpack .../36-dh-python_6.20250414_all.deb ... Unpacking dh-python (6.20250414) ... Selecting previously unselected package libexpat1-dev:arm64. Preparing to unpack .../37-libexpat1-dev_2.7.3-1_arm64.deb ... Unpacking libexpat1-dev:arm64 (2.7.3-1) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../38-libjs-sphinxdoc_8.2.3-7_all.deb ... Unpacking libjs-sphinxdoc (8.2.3-7) ... Selecting previously unselected package liblzo2-2:arm64. Preparing to unpack .../39-liblzo2-2_2.10-3+b1_arm64.deb ... Unpacking liblzo2-2:arm64 (2.10-3+b1) ... Selecting previously unselected package libpython3.13:arm64. Preparing to unpack .../40-libpython3.13_3.13.8-1_arm64.deb ... Unpacking libpython3.13:arm64 (3.13.8-1) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../41-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package libpython3.13-dev:arm64. Preparing to unpack .../42-libpython3.13-dev_3.13.8-1_arm64.deb ... Unpacking libpython3.13-dev:arm64 (3.13.8-1) ... Selecting previously unselected package libpython3-dev:arm64. Preparing to unpack .../43-libpython3-dev_3.13.7-1_arm64.deb ... Unpacking libpython3-dev:arm64 (3.13.7-1) ... Selecting previously unselected package libpython3-all-dev:arm64. Preparing to unpack .../44-libpython3-all-dev_3.13.7-1_arm64.deb ... Unpacking libpython3-all-dev:arm64 (3.13.7-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../45-python3-packaging_25.0-1_all.deb ... Unpacking python3-packaging (25.0-1) ... Selecting previously unselected package python3-pyproject-hooks. Preparing to unpack .../46-python3-pyproject-hooks_1.2.0-1_all.deb ... Unpacking python3-pyproject-hooks (1.2.0-1) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../47-python3-wheel_0.46.1-2_all.deb ... Unpacking python3-wheel (0.46.1-2) ... Selecting previously unselected package python3-build. Preparing to unpack .../48-python3-build_1.2.2-4_all.deb ... Unpacking python3-build (1.2.2-4) ... Selecting previously unselected package python3-installer. Preparing to unpack .../49-python3-installer_0.7.0+dfsg1-3_all.deb ... Unpacking python3-installer (0.7.0+dfsg1-3) ... Selecting previously unselected package pybuild-plugin-pyproject. Preparing to unpack .../50-pybuild-plugin-pyproject_6.20250414_all.deb ... Unpacking pybuild-plugin-pyproject (6.20250414) ... Selecting previously unselected package python3-all. Preparing to unpack .../51-python3-all_3.13.7-1_arm64.deb ... Unpacking python3-all (3.13.7-1) ... Selecting previously unselected package python3.13-dev. Preparing to unpack .../52-python3.13-dev_3.13.8-1_arm64.deb ... Unpacking python3.13-dev (3.13.8-1) ... Selecting previously unselected package python3-dev. Preparing to unpack .../53-python3-dev_3.13.7-1_arm64.deb ... Unpacking python3-dev (3.13.7-1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../54-python3-all-dev_3.13.7-1_arm64.deb ... Unpacking python3-all-dev (3.13.7-1) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../55-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../56-python3-more-itertools_10.8.0-1_all.deb ... Unpacking python3-more-itertools (10.8.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../57-python3-typing-extensions_4.15.0-1_all.deb ... Unpacking python3-typing-extensions (4.15.0-1) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../58-python3-typeguard_4.4.4-1_all.deb ... Unpacking python3-typeguard (4.4.4-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../59-python3-inflect_7.5.0-1_all.deb ... Unpacking python3-inflect (7.5.0-1) ... Selecting previously unselected package python3-iniconfig. Preparing to unpack .../60-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../61-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../62-python3-pkg-resources_78.1.1-0.1_all.deb ... Unpacking python3-pkg-resources (78.1.1-0.1) ... Selecting previously unselected package python3-jaraco.text. Preparing to unpack .../63-python3-jaraco.text_4.0.0-1_all.deb ... Unpacking python3-jaraco.text (4.0.0-1) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../64-python3-zipp_3.23.0-1_all.deb ... Unpacking python3-zipp (3.23.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../65-python3-setuptools_78.1.1-0.1_all.deb ... Unpacking python3-setuptools (78.1.1-0.1) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../66-python3-jaraco.context_6.0.1-1_all.deb ... Unpacking python3-jaraco.context (6.0.1-1) ... Selecting previously unselected package python3-lzo:arm64. Preparing to unpack .../67-python3-lzo_1.15-2+b4_arm64.deb ... Unpacking python3-lzo:arm64 (1.15-2+b4) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../68-python3-pluggy_1.6.0-1_all.deb ... Unpacking python3-pluggy (1.6.0-1) ... Selecting previously unselected package python3-pygments. Preparing to unpack .../69-python3-pygments_2.18.0+dfsg-2_all.deb ... Unpacking python3-pygments (2.18.0+dfsg-2) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../70-python3-pyparsing_3.1.2-1_all.deb ... Unpacking python3-pyparsing (3.1.2-1) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../71-python3-pytest_8.4.2-1_all.deb ... Unpacking python3-pytest (8.4.2-1) ... Selecting previously unselected package python3-pytest-cython. Preparing to unpack .../72-python3-pytest-cython_0.3.1-1_all.deb ... Unpacking python3-pytest-cython (0.3.1-1) ... Setting up media-types (13.0.0) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up bsdextrautils (2.41.2-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:arm64 (2.14.6+dfsg-0.1) ... Setting up libdebhelper-perl (13.28) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-2) ... Setting up liblzo2-2:arm64 (2.10-3+b1) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.193-3) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Oct 12 01:08:14 UTC 2025. Universal Time is now: Sun Oct 12 01:08:14 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... Setting up libblas3:arm64 (3.12.1-7) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libexpat1-dev:arm64 (2.7.3-1) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up python3-numpy-dev:arm64 (1:2.3.3+ds-3) ... Setting up autopoint (0.23.1-2) ... Setting up libjs-sphinxdoc (8.2.3-7) ... Setting up libgfortran5:arm64 (15.2.0-4) ... Setting up autoconf (2.72-3.1) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libffi8:arm64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:arm64 (0.0.8-2) ... Setting up netbase (6.5) ... Setting up readline-common (8.3-3) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up liblapack3:arm64 (3.12.1-7) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up libreadline8t64:arm64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:arm64 (3.13.8-1) ... Setting up libpython3-stdlib:arm64 (3.13.7-1) ... Setting up libpython3.13:arm64 (3.13.8-1) ... Setting up python3.13 (3.13.8-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up python3 (3.13.7-1) ... Setting up python3-zipp (3.23.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-pygments (2.18.0+dfsg-2) ... Setting up python3-packaging (25.0-1) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up libpython3.13-dev:arm64 (3.13.8-1) ... Setting up cython3 (3.0.11+dfsg-2+b1) ... Setting up python3-typing-extensions (4.15.0-1) ... Setting up python3-numpy (1:2.3.3+ds-3) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-pluggy (1.6.0-1) ... Setting up python3-lzo:arm64 (1.15-2+b4) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.8.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up libpython3-dev:arm64 (3.13.7-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up python3.13-dev (3.13.8-1) ... Setting up python3-pytest (8.4.2-1) ... Setting up python3-typeguard (4.4.4-1) ... Setting up python3-all (3.13.7-1) ... Setting up debhelper (13.28) ... Setting up python3-wheel (0.46.1-2) ... Setting up python3-inflect (7.5.0-1) ... Setting up libpython3-all-dev:arm64 (3.13.7-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.13.7-1) ... Setting up python3-build (1.2.2-4) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up python3-all-dev (3.13.7-1) ... Setting up python3-setuptools (78.1.1-0.1) ... Setting up python3-pytest-cython (0.3.1-1) ... Setting up pybuild-plugin-pyproject (6.20250414) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.37.1.2-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/python-bx-0.13.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-bx_0.13.0-2_source.changes dpkg-buildpackage: info: source package python-bx dpkg-buildpackage: info: source version 0.13.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Santiago Vila dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/python-bx-0.13.0' find -name "*.pyx" | sed 's/pyx$/c/' | xargs rm -f grep -rli "Generated by Cython" lib/ | xargs -r rm rm -rf lib/bx_python.egg-info make[1]: Leaving directory '/build/reproducible-path/python-bx-0.13.0' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-bx-0.13.0/.pybuild/cpython3_3.13_bx-python * Building wheel... /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-aarch64-cpython-313/bx_extras copying lib/bx_extras/stats.py -> build/lib.linux-aarch64-cpython-313/bx_extras copying lib/bx_extras/pstat.py -> build/lib.linux-aarch64-cpython-313/bx_extras copying lib/bx_extras/lrucache.py -> build/lib.linux-aarch64-cpython-313/bx_extras copying lib/bx_extras/fpconst_tests.py -> build/lib.linux-aarch64-cpython-313/bx_extras copying lib/bx_extras/fpconst.py -> build/lib.linux-aarch64-cpython-313/bx_extras copying lib/bx_extras/__init__.py -> build/lib.linux-aarch64-cpython-313/bx_extras creating build/lib.linux-aarch64-cpython-313/bx copying lib/bx/interval_index_file.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/wiggle_tests.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/wiggle.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/seqmapping_tests.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/seqmapping.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/interval_index_file_tests.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/gene_reader.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/filter.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/bitset_utils.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/bitset_tests.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/bitset_builders.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/binned_array_tests.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/binned_array.py -> build/lib.linux-aarch64-cpython-313/bx copying lib/bx/__init__.py -> build/lib.linux-aarch64-cpython-313/bx creating build/lib.linux-aarch64-cpython-313/bx/tabular copying lib/bx/tabular/io.py -> build/lib.linux-aarch64-cpython-313/bx/tabular copying lib/bx/tabular/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/tabular creating build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/twobit_tests.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/twobit.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/seq_tests.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/seq.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/qdna_tests.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/qdna.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/nib_tests.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/nib.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/fasta_tests.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/fasta.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/core.py -> build/lib.linux-aarch64-cpython-313/bx/seq copying lib/bx/seq/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/seq creating build/lib.linux-aarch64-cpython-313/bx/pwm copying lib/bx/pwm/pwm_score_maf.py -> build/lib.linux-aarch64-cpython-313/bx/pwm copying lib/bx/pwm/pwm_score_positions.py -> build/lib.linux-aarch64-cpython-313/bx/pwm copying lib/bx/pwm/pwm_score_motifs.py -> build/lib.linux-aarch64-cpython-313/bx/pwm copying lib/bx/pwm/position_weight_matrix.py -> build/lib.linux-aarch64-cpython-313/bx/pwm copying lib/bx/pwm/maf_select_motifs.py -> build/lib.linux-aarch64-cpython-313/bx/pwm copying lib/bx/pwm/bed_score_aligned_string.py -> build/lib.linux-aarch64-cpython-313/bx/pwm copying lib/bx/pwm/bed_score_aligned_pwm.py -> build/lib.linux-aarch64-cpython-313/bx/pwm copying lib/bx/pwm/pwm_tests.py -> build/lib.linux-aarch64-cpython-313/bx/pwm copying lib/bx/pwm/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/pwm creating build/lib.linux-aarch64-cpython-313/bx/phylo copying lib/bx/phylo/phast_tests.py -> build/lib.linux-aarch64-cpython-313/bx/phylo copying lib/bx/phylo/phast.py -> build/lib.linux-aarch64-cpython-313/bx/phylo copying lib/bx/phylo/newick_tests.py -> build/lib.linux-aarch64-cpython-313/bx/phylo copying lib/bx/phylo/newick.py -> build/lib.linux-aarch64-cpython-313/bx/phylo copying lib/bx/phylo/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/phylo creating build/lib.linux-aarch64-cpython-313/bx/motif copying lib/bx/motif/pwm_tests.py -> build/lib.linux-aarch64-cpython-313/bx/motif copying lib/bx/motif/pwm.py -> build/lib.linux-aarch64-cpython-313/bx/motif copying lib/bx/motif/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/motif creating build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/seeklzop_tests.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/seeklzop.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/seekbzip2_tests.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/seekbzip2.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/readlengths.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/filecache_tests.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/filecache.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/cdb_tests.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/cdb.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/binary_file.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/bgzf_tests.py -> build/lib.linux-aarch64-cpython-313/bx/misc copying lib/bx/misc/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/misc creating build/lib.linux-aarch64-cpython-313/bx/intseq copying lib/bx/intseq/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/intseq creating build/lib.linux-aarch64-cpython-313/bx/intervals copying lib/bx/intervals/random_intervals.py -> build/lib.linux-aarch64-cpython-313/bx/intervals copying lib/bx/intervals/io.py -> build/lib.linux-aarch64-cpython-313/bx/intervals copying lib/bx/intervals/intersection_tests.py -> build/lib.linux-aarch64-cpython-313/bx/intervals copying lib/bx/intervals/cluster_tests.py -> build/lib.linux-aarch64-cpython-313/bx/intervals copying lib/bx/intervals/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/intervals creating build/lib.linux-aarch64-cpython-313/bx/cookbook copying lib/bx/cookbook/doc_optparse.py -> build/lib.linux-aarch64-cpython-313/bx/cookbook copying lib/bx/cookbook/attribute.py -> build/lib.linux-aarch64-cpython-313/bx/cookbook copying lib/bx/cookbook/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/cookbook creating build/lib.linux-aarch64-cpython-313/bx/bbi copying lib/bx/bbi/bigwig_tests.py -> build/lib.linux-aarch64-cpython-313/bx/bbi copying lib/bx/bbi/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/bbi creating build/lib.linux-aarch64-cpython-313/bx/arrays copying lib/bx/arrays/array_tree_tests.py -> build/lib.linux-aarch64-cpython-313/bx/arrays copying lib/bx/arrays/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/arrays creating build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/epo_tests.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/epo.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/score_tests.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/score.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/maf_tests.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/maf.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/lav_tests.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/lav.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/core.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/axt.py -> build/lib.linux-aarch64-cpython-313/bx/align copying lib/bx/align/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/align creating build/lib.linux-aarch64-cpython-313/bx/motif/logo copying lib/bx/motif/logo/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/motif/logo creating build/lib.linux-aarch64-cpython-313/bx/motif/io copying lib/bx/motif/io/transfac_tests.py -> build/lib.linux-aarch64-cpython-313/bx/motif/io copying lib/bx/motif/io/transfac.py -> build/lib.linux-aarch64-cpython-313/bx/motif/io copying lib/bx/motif/io/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/motif/io creating build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/subtract.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/quicksect.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/merge.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/join.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/intersect.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/find_clusters.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/coverage.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/concat.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/complement.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/base_coverage.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations copying lib/bx/intervals/operations/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/intervals/operations creating build/lib.linux-aarch64-cpython-313/bx/align/tools copying lib/bx/align/tools/tile.py -> build/lib.linux-aarch64-cpython-313/bx/align/tools copying lib/bx/align/tools/thread.py -> build/lib.linux-aarch64-cpython-313/bx/align/tools copying lib/bx/align/tools/fuse.py -> build/lib.linux-aarch64-cpython-313/bx/align/tools copying lib/bx/align/tools/chop.py -> build/lib.linux-aarch64-cpython-313/bx/align/tools copying lib/bx/align/tools/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/align/tools creating build/lib.linux-aarch64-cpython-313/bx/align/sitemask copying lib/bx/align/sitemask/sitemask_tests.py -> build/lib.linux-aarch64-cpython-313/bx/align/sitemask copying lib/bx/align/sitemask/quality.py -> build/lib.linux-aarch64-cpython-313/bx/align/sitemask copying lib/bx/align/sitemask/cpg.py -> build/lib.linux-aarch64-cpython-313/bx/align/sitemask copying lib/bx/align/sitemask/core.py -> build/lib.linux-aarch64-cpython-313/bx/align/sitemask copying lib/bx/align/sitemask/__init__.py -> build/lib.linux-aarch64-cpython-313/bx/align/sitemask copying lib/bx/motif/logo/template.ps -> build/lib.linux-aarch64-cpython-313/bx/motif/logo running build_ext /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/bitset.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/bitset.pyx because it changed. [1/1] Cythonizing lib/bx/bitset.pyx building 'bx.bitset' extension creating build/temp.linux-aarch64-cpython-313/lib/bx creating build/temp.linux-aarch64-cpython-313/src creating build/temp.linux-aarch64-cpython-313/src/kent aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.13 -c lib/bx/bitset.c -o build/temp.linux-aarch64-cpython-313/lib/bx/bitset.o aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.13 -c src/binBits.c -o build/temp.linux-aarch64-cpython-313/src/binBits.o aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.13 -c src/kent/bits.c -o build/temp.linux-aarch64-cpython-313/src/kent/bits.o aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/kent -Isrc -I/usr/include/python3.13 -c src/kent/common.c -o build/temp.linux-aarch64-cpython-313/src/kent/common.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/bitset.o build/temp.linux-aarch64-cpython-313/src/binBits.o build/temp.linux-aarch64-cpython-313/src/kent/bits.o build/temp.linux-aarch64-cpython-313/src/kent/common.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/bitset.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/intervals/intersection.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/intervals/intersection.pyx because it changed. [1/1] Cythonizing lib/bx/intervals/intersection.pyx building 'bx.intervals.intersection' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/intervals aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/intervals/intersection.c -o build/temp.linux-aarch64-cpython-313/lib/bx/intervals/intersection.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/intervals/intersection.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/intervals/intersection.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/align/_core.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/align/_core.pyx because it changed. [1/1] Cythonizing lib/bx/align/_core.pyx building 'bx.align._core' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/align aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/align/_core.c -o build/temp.linux-aarch64-cpython-313/lib/bx/align/_core.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/align/_core.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/align/_core.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/seq/_nib.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/seq/_nib.pyx because it changed. [1/1] Cythonizing lib/bx/seq/_nib.pyx building 'bx.seq._nib' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/seq aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/seq/_nib.c -o build/temp.linux-aarch64-cpython-313/lib/bx/seq/_nib.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/seq/_nib.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/seq/_nib.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/seq/_twobit.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/seq/_twobit.pyx because it changed. [1/1] Cythonizing lib/bx/seq/_twobit.pyx building 'bx.seq._twobit' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/seq/_twobit.c -o build/temp.linux-aarch64-cpython-313/lib/bx/seq/_twobit.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/seq/_twobit.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/seq/_twobit.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/_seqmapping.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/_seqmapping.pyx because it changed. [1/1] Cythonizing lib/bx/_seqmapping.pyx building 'bx._seqmapping' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/_seqmapping.c -o build/temp.linux-aarch64-cpython-313/lib/bx/_seqmapping.o In function ‘__pyx_pf_2bx_11_seqmapping_15IntToIntMapping___cinit__’, inlined from ‘__pyx_pw_2bx_11_seqmapping_15IntToIntMapping_1__cinit__’ at lib/bx/_seqmapping.c:5104:13, inlined from ‘__pyx_tp_new_2bx_11_seqmapping_IntToIntMapping’ at lib/bx/_seqmapping.c:8107:7: lib/bx/_seqmapping.c:5142:33: warning: argument 1 value ‘18446744073709551612’ exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 5142 | __pyx_v_self->table = ((int *)malloc((__pyx_v_in_size * (sizeof(int))))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/python3.13/Python.h:39, from lib/bx/_seqmapping.c:29: /usr/include/stdlib.h: In function ‘__pyx_tp_new_2bx_11_seqmapping_IntToIntMapping’: /usr/include/stdlib.h:672:14: note: in a call to allocation function ‘malloc’ declared here 672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__ | ^~~~~~ aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/_seqmapping.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/_seqmapping.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/misc/bgzf.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/misc/bgzf.pyx because it changed. [1/1] Cythonizing lib/bx/misc/bgzf.pyx building 'bx.misc.bgzf' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/misc creating build/temp.linux-aarch64-cpython-313/src/samtools aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/samtools -I/usr/include/python3.13 -c lib/bx/misc/bgzf.c -o build/temp.linux-aarch64-cpython-313/lib/bx/misc/bgzf.o aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/samtools -I/usr/include/python3.13 -c src/samtools/bgzf.c -o build/temp.linux-aarch64-cpython-313/src/samtools/bgzf.o src/samtools/bgzf.c: In function ‘bgzf_check_EOF’: src/samtools/bgzf.c:662:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 662 | fread(buf, 1, 28, fp->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/misc/bgzf.o build/temp.linux-aarch64-cpython-313/src/samtools/bgzf.o -L/usr/lib/aarch64-linux-gnu -lz -o build/lib.linux-aarch64-cpython-313/bx/misc/bgzf.cpython-313-aarch64-linux-gnu.so /usr/lib/aarch64-linux-gnu/libz.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/intervals/cluster.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/intervals/cluster.pyx because it changed. [1/1] Cythonizing lib/bx/intervals/cluster.pyx building 'bx.intervals.cluster' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.13 -c lib/bx/intervals/cluster.c -o build/temp.linux-aarch64-cpython-313/lib/bx/intervals/cluster.o aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.13 -c src/cluster.c -o build/temp.linux-aarch64-cpython-313/src/cluster.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/intervals/cluster.o build/temp.linux-aarch64-cpython-313/src/cluster.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/intervals/cluster.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/pwm/_position_weight_matrix.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/pwm/_position_weight_matrix.pyx because it changed. [1/1] Cythonizing lib/bx/pwm/_position_weight_matrix.pyx building 'bx.pwm._position_weight_matrix' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/pwm aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.13 -c lib/bx/pwm/_position_weight_matrix.c -o build/temp.linux-aarch64-cpython-313/lib/bx/pwm/_position_weight_matrix.o aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.13 -c src/pwm_utils.c -o build/temp.linux-aarch64-cpython-313/src/pwm_utils.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/pwm/_position_weight_matrix.o build/temp.linux-aarch64-cpython-313/src/pwm_utils.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/pwm/_position_weight_matrix.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/motif/_pwm.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/motif/_pwm.pyx because it changed. [1/1] Cythonizing lib/bx/motif/_pwm.pyx building 'bx.motif._pwm' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/motif aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c lib/bx/motif/_pwm.c -o build/temp.linux-aarch64-cpython-313/lib/bx/motif/_pwm.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/motif/_pwm.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/motif/_pwm.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/arrays/array_tree.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/arrays/array_tree.pyx because it changed. [1/1] Cythonizing lib/bx/arrays/array_tree.pyx building 'bx.arrays.array_tree' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/arrays aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c lib/bx/arrays/array_tree.c -o build/temp.linux-aarch64-cpython-313/lib/bx/arrays/array_tree.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/arrays/array_tree.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/arrays/array_tree.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/bbi/bpt_file.pxd tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/bbi/bpt_file.pyx because it changed. [1/1] Cythonizing lib/bx/bbi/bpt_file.pyx building 'bx.bbi.bpt_file' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/bbi aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/bbi/bpt_file.c -o build/temp.linux-aarch64-cpython-313/lib/bx/bbi/bpt_file.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/bbi/bpt_file.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/bbi/bpt_file.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/bbi/cirtree_file.pxd tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/bbi/cirtree_file.pyx because it changed. [1/1] Cythonizing lib/bx/bbi/cirtree_file.pyx building 'bx.bbi.cirtree_file' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/bbi/cirtree_file.c -o build/temp.linux-aarch64-cpython-313/lib/bx/bbi/cirtree_file.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/bbi/cirtree_file.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/bbi/cirtree_file.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/bbi/bbi_file.pxd tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/bbi/bbi_file.pyx because it changed. [1/1] Cythonizing lib/bx/bbi/bbi_file.pyx building 'bx.bbi.bbi_file' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c lib/bx/bbi/bbi_file.c -o build/temp.linux-aarch64-cpython-313/lib/bx/bbi/bbi_file.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/bbi/bbi_file.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/bbi/bbi_file.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/bbi/bigwig_file.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/bbi/bigwig_file.pyx because it changed. [1/1] Cythonizing lib/bx/bbi/bigwig_file.pyx building 'bx.bbi.bigwig_file' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c lib/bx/bbi/bigwig_file.c -o build/temp.linux-aarch64-cpython-313/lib/bx/bbi/bigwig_file.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/bbi/bigwig_file.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/bbi/bigwig_file.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/bbi/bigbed_file.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/bbi/bigbed_file.pyx because it changed. [1/1] Cythonizing lib/bx/bbi/bigbed_file.pyx building 'bx.bbi.bigbed_file' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c lib/bx/bbi/bigbed_file.c -o build/temp.linux-aarch64-cpython-313/lib/bx/bbi/bigbed_file.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/bbi/bigbed_file.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/bbi/bigbed_file.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/align/_epo.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/align/_epo.pyx because it changed. [1/1] Cythonizing lib/bx/align/_epo.pyx building 'bx.align._epo' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c lib/bx/align/_epo.c -o build/temp.linux-aarch64-cpython-313/lib/bx/align/_epo.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/align/_epo.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/align/_epo.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/arrays/bed.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/arrays/bed.pyx because it changed. [1/1] Cythonizing lib/bx/arrays/bed.pyx building 'bx.arrays.bed' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/arrays/bed.c -o build/temp.linux-aarch64-cpython-313/lib/bx/arrays/bed.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/arrays/bed.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/arrays/bed.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/arrays/wiggle.pxd tree = Parsing.p_module(s, pxd, full_module_name) warning: lib/bx/arrays/wiggle.pyx:94:20: Unreachable code Compiling lib/bx/arrays/wiggle.pyx because it changed. [1/1] Cythonizing lib/bx/arrays/wiggle.pyx building 'bx.arrays.wiggle' extension aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/arrays/wiggle.c -o build/temp.linux-aarch64-cpython-313/lib/bx/arrays/wiggle.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/arrays/wiggle.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/arrays/wiggle.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/align/sitemask/_cpg.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/align/sitemask/_cpg.pyx because it changed. [1/1] Cythonizing lib/bx/align/sitemask/_cpg.pyx building 'bx.align.sitemask._cpg' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/align/sitemask aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/align/sitemask/_cpg.c -o build/temp.linux-aarch64-cpython-313/lib/bx/align/sitemask/_cpg.o aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c lib/bx/align/sitemask/find_cpg.c -o build/temp.linux-aarch64-cpython-313/lib/bx/align/sitemask/find_cpg.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/align/sitemask/_cpg.o build/temp.linux-aarch64-cpython-313/lib/bx/align/sitemask/find_cpg.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/align/sitemask/_cpg.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/intseq/ngramcount.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/intseq/ngramcount.pyx because it changed. [1/1] Cythonizing lib/bx/intseq/ngramcount.pyx building 'bx.intseq.ngramcount' extension creating build/temp.linux-aarch64-cpython-313/lib/bx/intseq aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -I/usr/include/python3.13 -c lib/bx/intseq/ngramcount.c -o build/temp.linux-aarch64-cpython-313/lib/bx/intseq/ngramcount.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/intseq/ngramcount.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/intseq/ngramcount.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-bx-0.13.0/lib/bx/misc/_seekbzip2.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling lib/bx/misc/_seekbzip2.pyx because it changed. [1/1] Cythonizing lib/bx/misc/_seekbzip2.pyx building 'bx.misc._seekbzip2' extension creating build/temp.linux-aarch64-cpython-313/src/bunzip aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/bunzip -I/usr/include/python3.13 -c lib/bx/misc/_seekbzip2.c -o build/temp.linux-aarch64-cpython-313/lib/bx/misc/_seekbzip2.o aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc/bunzip -I/usr/include/python3.13 -c src/bunzip/micro-bunzip.c -o build/temp.linux-aarch64-cpython-313/src/bunzip/micro-bunzip.o aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-bx-0.13.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/lib/bx/misc/_seekbzip2.o build/temp.linux-aarch64-cpython-313/src/bunzip/micro-bunzip.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-313/bx/misc/_seekbzip2.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. running build_scripts creating build/scripts-3.13 copying and adjusting scripts/wiggle_to_simple.py -> build/scripts-3.13 copying and adjusting scripts/wiggle_to_chr_binned_array.py -> build/scripts-3.13 copying and adjusting scripts/wiggle_to_binned_array.py -> build/scripts-3.13 copying and adjusting scripts/wiggle_to_array_tree.py -> build/scripts-3.13 copying and adjusting scripts/ucsc_gene_table_to_intervals.py -> build/scripts-3.13 copying and adjusting scripts/tfloc_summary.py -> build/scripts-3.13 copying and adjusting scripts/table_filter.py -> build/scripts-3.13 copying and adjusting scripts/table_add_column.py -> build/scripts-3.13 copying and adjusting scripts/random_lines.py -> build/scripts-3.13 copying and adjusting scripts/qv_to_bqv.py -> build/scripts-3.13 copying and adjusting scripts/pretty_table.py -> build/scripts-3.13 copying and adjusting scripts/prefix_lines.py -> build/scripts-3.13 copying and adjusting scripts/out_to_chain.py -> build/scripts-3.13 copying and adjusting scripts/one_field_per_line.py -> build/scripts-3.13 copying and adjusting scripts/nib_length.py -> build/scripts-3.13 copying and adjusting scripts/nib_intervals_to_fasta.py -> build/scripts-3.13 copying and adjusting scripts/nib_chrom_intervals_to_fasta.py -> build/scripts-3.13 copying and adjusting scripts/mask_quality.py -> build/scripts-3.13 copying and adjusting scripts/maf_word_frequency.py -> build/scripts-3.13 copying and adjusting scripts/maf_truncate.py -> build/scripts-3.13 copying and adjusting scripts/maf_translate_chars.py -> build/scripts-3.13 copying and adjusting scripts/maf_to_int_seqs.py -> build/scripts-3.13 copying and adjusting scripts/maf_to_fasta.py -> build/scripts-3.13 copying and adjusting scripts/maf_to_concat_fasta.py -> build/scripts-3.13 copying and adjusting scripts/maf_to_axt.py -> build/scripts-3.13 copying and adjusting scripts/maf_tile_2bit.py -> build/scripts-3.13 copying and adjusting scripts/maf_tile_2.py -> build/scripts-3.13 copying and adjusting scripts/maf_tile.py -> build/scripts-3.13 copying and adjusting scripts/maf_thread_for_species.py -> build/scripts-3.13 copying and adjusting scripts/maf_split_by_src.py -> build/scripts-3.13 copying and adjusting scripts/maf_species_in_all_files.py -> build/scripts-3.13 copying and adjusting scripts/maf_shuffle_columns.py -> build/scripts-3.13 copying and adjusting scripts/maf_select.py -> build/scripts-3.13 copying and adjusting scripts/maf_region_coverage_by_src.py -> build/scripts-3.13 copying and adjusting scripts/maf_randomize.py -> build/scripts-3.13 copying and adjusting scripts/maf_print_scores.py -> build/scripts-3.13 copying and adjusting scripts/maf_print_chroms.py -> build/scripts-3.13 copying and adjusting scripts/maf_percent_identity.py -> build/scripts-3.13 copying and adjusting scripts/maf_percent_columns_matching.py -> build/scripts-3.13 copying and adjusting scripts/maf_mean_length_ungapped_piece.py -> build/scripts-3.13 copying and adjusting scripts/maf_mask_cpg.py -> build/scripts-3.13 copying and adjusting scripts/maf_mapping_word_frequency.py -> build/scripts-3.13 copying and adjusting scripts/maf_limit_to_species.py -> build/scripts-3.13 copying and adjusting scripts/maf_interval_alignibility.py -> build/scripts-3.13 copying and adjusting scripts/maf_gc_content.py -> build/scripts-3.13 copying and adjusting scripts/maf_gap_frequency.py -> build/scripts-3.13 copying and adjusting scripts/maf_filter_max_wc.py -> build/scripts-3.13 copying and adjusting scripts/maf_filter.py -> build/scripts-3.13 copying and adjusting scripts/maf_extract_ranges_indexed.py -> build/scripts-3.13 copying and adjusting scripts/maf_extract_ranges.py -> build/scripts-3.13 copying and adjusting scripts/maf_extract_chrom_ranges.py -> build/scripts-3.13 copying and adjusting scripts/maf_drop_overlapping.py -> build/scripts-3.13 copying and adjusting scripts/maf_div_sites.py -> build/scripts-3.13 copying and adjusting scripts/maf_covered_regions.py -> build/scripts-3.13 copying and adjusting scripts/maf_covered_ranges.py -> build/scripts-3.13 copying and adjusting scripts/maf_count.py -> build/scripts-3.13 copying and adjusting scripts/maf_col_counts_all.py -> build/scripts-3.13 copying and adjusting scripts/maf_col_counts.py -> build/scripts-3.13 copying and adjusting scripts/maf_chunk.py -> build/scripts-3.13 copying and adjusting scripts/maf_chop.py -> build/scripts-3.13 copying and adjusting scripts/maf_build_index.py -> build/scripts-3.13 copying and adjusting scripts/mMK_bitset.py -> build/scripts-3.13 copying and adjusting scripts/lzop_build_offset_table.py -> build/scripts-3.13 copying and adjusting scripts/line_select.py -> build/scripts-3.13 copying and adjusting scripts/lav_to_maf.py -> build/scripts-3.13 copying and adjusting scripts/lav_to_axt.py -> build/scripts-3.13 copying and adjusting scripts/interval_join.py -> build/scripts-3.13 copying and adjusting scripts/interval_count_intersections.py -> build/scripts-3.13 copying and adjusting scripts/int_seqs_to_char_strings.py -> build/scripts-3.13 copying and adjusting scripts/get_scores_in_intervals.py -> build/scripts-3.13 copying and adjusting scripts/find_in_sorted_file.py -> build/scripts-3.13 copying and adjusting scripts/div_snp_table_chr.py -> build/scripts-3.13 copying and adjusting scripts/bnMapper.py -> build/scripts-3.13 copying and adjusting scripts/bed_subtract_basewise.py -> build/scripts-3.13 copying and adjusting scripts/bed_rand_intersect.py -> build/scripts-3.13 copying and adjusting scripts/bed_merge_overlapping.py -> build/scripts-3.13 copying and adjusting scripts/bed_intersect_basewise.py -> build/scripts-3.13 copying and adjusting scripts/bed_intersect.py -> build/scripts-3.13 copying and adjusting scripts/bed_extend_to.py -> build/scripts-3.13 copying and adjusting scripts/bed_diff_basewise_summary.py -> build/scripts-3.13 copying and adjusting scripts/bed_coverage_by_interval.py -> build/scripts-3.13 copying and adjusting scripts/bed_coverage.py -> build/scripts-3.13 copying and adjusting scripts/bed_count_overlapping.py -> build/scripts-3.13 copying and adjusting scripts/bed_count_by_interval.py -> build/scripts-3.13 copying and adjusting scripts/bed_complement.py -> build/scripts-3.13 copying and adjusting scripts/bed_build_windows.py -> build/scripts-3.13 copying and adjusting scripts/bed_bigwig_profile.py -> build/scripts-3.13 copying and adjusting scripts/axt_to_maf.py -> build/scripts-3.13 copying and adjusting scripts/axt_to_lav.py -> build/scripts-3.13 copying and adjusting scripts/axt_to_fasta.py -> build/scripts-3.13 copying and adjusting scripts/axt_extract_ranges.py -> build/scripts-3.13 copying and adjusting scripts/align_print_template.py -> build/scripts-3.13 copying and adjusting scripts/aggregate_scores_in_intervals.py -> build/scripts-3.13 copying and adjusting scripts/gene_fourfold_sites.py -> build/scripts-3.13 changing mode of build/scripts-3.13/wiggle_to_simple.py from 644 to 755 changing mode of build/scripts-3.13/wiggle_to_chr_binned_array.py from 644 to 755 changing mode of build/scripts-3.13/wiggle_to_binned_array.py from 644 to 755 changing mode of build/scripts-3.13/wiggle_to_array_tree.py from 644 to 755 changing mode of build/scripts-3.13/ucsc_gene_table_to_intervals.py from 644 to 755 changing mode of build/scripts-3.13/tfloc_summary.py from 644 to 755 changing mode of build/scripts-3.13/table_filter.py from 644 to 755 changing mode of build/scripts-3.13/table_add_column.py from 644 to 755 changing mode of build/scripts-3.13/random_lines.py from 644 to 755 changing mode of build/scripts-3.13/qv_to_bqv.py from 644 to 755 changing mode of build/scripts-3.13/pretty_table.py from 644 to 755 changing mode of build/scripts-3.13/prefix_lines.py from 644 to 755 changing mode of build/scripts-3.13/out_to_chain.py from 644 to 755 changing mode of build/scripts-3.13/one_field_per_line.py from 644 to 755 changing mode of build/scripts-3.13/nib_length.py from 644 to 755 changing mode of build/scripts-3.13/nib_intervals_to_fasta.py from 644 to 755 changing mode of build/scripts-3.13/nib_chrom_intervals_to_fasta.py from 644 to 755 changing mode of build/scripts-3.13/mask_quality.py from 644 to 755 changing mode of build/scripts-3.13/maf_word_frequency.py from 644 to 755 changing mode of build/scripts-3.13/maf_truncate.py from 644 to 755 changing mode of build/scripts-3.13/maf_translate_chars.py from 644 to 755 changing mode of build/scripts-3.13/maf_to_int_seqs.py from 644 to 755 changing mode of build/scripts-3.13/maf_to_fasta.py from 644 to 755 changing mode of build/scripts-3.13/maf_to_concat_fasta.py from 644 to 755 changing mode of build/scripts-3.13/maf_to_axt.py from 644 to 755 changing mode of build/scripts-3.13/maf_tile_2bit.py from 644 to 755 changing mode of build/scripts-3.13/maf_tile_2.py from 644 to 755 changing mode of build/scripts-3.13/maf_tile.py from 644 to 755 changing mode of build/scripts-3.13/maf_thread_for_species.py from 644 to 755 changing mode of build/scripts-3.13/maf_split_by_src.py from 644 to 755 changing mode of build/scripts-3.13/maf_species_in_all_files.py from 644 to 755 changing mode of build/scripts-3.13/maf_shuffle_columns.py from 644 to 755 changing mode of build/scripts-3.13/maf_select.py from 644 to 755 changing mode of build/scripts-3.13/maf_region_coverage_by_src.py from 644 to 755 changing mode of build/scripts-3.13/maf_randomize.py from 644 to 755 changing mode of build/scripts-3.13/maf_print_scores.py from 644 to 755 changing mode of build/scripts-3.13/maf_print_chroms.py from 644 to 755 changing mode of build/scripts-3.13/maf_percent_identity.py from 644 to 755 changing mode of build/scripts-3.13/maf_percent_columns_matching.py from 644 to 755 changing mode of build/scripts-3.13/maf_mean_length_ungapped_piece.py from 644 to 755 changing mode of build/scripts-3.13/maf_mask_cpg.py from 644 to 755 changing mode of build/scripts-3.13/maf_mapping_word_frequency.py from 644 to 755 changing mode of build/scripts-3.13/maf_limit_to_species.py from 644 to 755 changing mode of build/scripts-3.13/maf_interval_alignibility.py from 644 to 755 changing mode of build/scripts-3.13/maf_gc_content.py from 644 to 755 changing mode of build/scripts-3.13/maf_gap_frequency.py from 644 to 755 changing mode of build/scripts-3.13/maf_filter_max_wc.py from 644 to 755 changing mode of build/scripts-3.13/maf_filter.py from 644 to 755 changing mode of build/scripts-3.13/maf_extract_ranges_indexed.py from 644 to 755 changing mode of build/scripts-3.13/maf_extract_ranges.py from 644 to 755 changing mode of build/scripts-3.13/maf_extract_chrom_ranges.py from 644 to 755 changing mode of build/scripts-3.13/maf_drop_overlapping.py from 644 to 755 changing mode of build/scripts-3.13/maf_div_sites.py from 644 to 755 changing mode of build/scripts-3.13/maf_covered_regions.py from 644 to 755 changing mode of build/scripts-3.13/maf_covered_ranges.py from 644 to 755 changing mode of build/scripts-3.13/maf_count.py from 644 to 755 changing mode of build/scripts-3.13/maf_col_counts_all.py from 644 to 755 changing mode of build/scripts-3.13/maf_col_counts.py from 644 to 755 changing mode of build/scripts-3.13/maf_chunk.py from 644 to 755 changing mode of build/scripts-3.13/maf_chop.py from 644 to 755 changing mode of build/scripts-3.13/maf_build_index.py from 644 to 755 changing mode of build/scripts-3.13/mMK_bitset.py from 644 to 755 changing mode of build/scripts-3.13/lzop_build_offset_table.py from 644 to 755 changing mode of build/scripts-3.13/line_select.py from 644 to 755 changing mode of build/scripts-3.13/lav_to_maf.py from 644 to 755 changing mode of build/scripts-3.13/lav_to_axt.py from 644 to 755 changing mode of build/scripts-3.13/interval_join.py from 644 to 755 changing mode of build/scripts-3.13/interval_count_intersections.py from 644 to 755 changing mode of build/scripts-3.13/int_seqs_to_char_strings.py from 644 to 755 changing mode of build/scripts-3.13/get_scores_in_intervals.py from 644 to 755 changing mode of build/scripts-3.13/find_in_sorted_file.py from 644 to 755 changing mode of build/scripts-3.13/div_snp_table_chr.py from 644 to 755 changing mode of build/scripts-3.13/bnMapper.py from 644 to 755 changing mode of build/scripts-3.13/bed_subtract_basewise.py from 644 to 755 changing mode of build/scripts-3.13/bed_rand_intersect.py from 644 to 755 changing mode of build/scripts-3.13/bed_merge_overlapping.py from 644 to 755 changing mode of build/scripts-3.13/bed_intersect_basewise.py from 644 to 755 changing mode of build/scripts-3.13/bed_intersect.py from 644 to 755 changing mode of build/scripts-3.13/bed_extend_to.py from 644 to 755 changing mode of build/scripts-3.13/bed_diff_basewise_summary.py from 644 to 755 changing mode of build/scripts-3.13/bed_coverage_by_interval.py from 644 to 755 changing mode of build/scripts-3.13/bed_coverage.py from 644 to 755 changing mode of build/scripts-3.13/bed_count_overlapping.py from 644 to 755 changing mode of build/scripts-3.13/bed_count_by_interval.py from 644 to 755 changing mode of build/scripts-3.13/bed_complement.py from 644 to 755 changing mode of build/scripts-3.13/bed_build_windows.py from 644 to 755 changing mode of build/scripts-3.13/bed_bigwig_profile.py from 644 to 755 changing mode of build/scripts-3.13/axt_to_maf.py from 644 to 755 changing mode of build/scripts-3.13/axt_to_lav.py from 644 to 755 changing mode of build/scripts-3.13/axt_to_fasta.py from 644 to 755 changing mode of build/scripts-3.13/axt_extract_ranges.py from 644 to 755 changing mode of build/scripts-3.13/align_print_template.py from 644 to 755 changing mode of build/scripts-3.13/aggregate_scores_in_intervals.py from 644 to 755 changing mode of build/scripts-3.13/gene_fourfold_sites.py from 644 to 755 installing to build/bdist.linux-aarch64/wheel running install running install_lib creating build/bdist.linux-aarch64/wheel creating build/bdist.linux-aarch64/wheel/bx copying build/lib.linux-aarch64-cpython-313/bx/_seqmapping.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/bitset.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx creating build/bdist.linux-aarch64/wheel/bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/_epo.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/_core.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/align creating build/bdist.linux-aarch64/wheel/bx/align/sitemask copying build/lib.linux-aarch64-cpython-313/bx/align/sitemask/_cpg.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/align/sitemask copying build/lib.linux-aarch64-cpython-313/bx/align/sitemask/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/align/sitemask copying build/lib.linux-aarch64-cpython-313/bx/align/sitemask/core.py -> build/bdist.linux-aarch64/wheel/./bx/align/sitemask copying build/lib.linux-aarch64-cpython-313/bx/align/sitemask/cpg.py -> build/bdist.linux-aarch64/wheel/./bx/align/sitemask copying build/lib.linux-aarch64-cpython-313/bx/align/sitemask/quality.py -> build/bdist.linux-aarch64/wheel/./bx/align/sitemask copying build/lib.linux-aarch64-cpython-313/bx/align/sitemask/sitemask_tests.py -> build/bdist.linux-aarch64/wheel/./bx/align/sitemask creating build/bdist.linux-aarch64/wheel/bx/align/tools copying build/lib.linux-aarch64-cpython-313/bx/align/tools/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/align/tools copying build/lib.linux-aarch64-cpython-313/bx/align/tools/chop.py -> build/bdist.linux-aarch64/wheel/./bx/align/tools copying build/lib.linux-aarch64-cpython-313/bx/align/tools/fuse.py -> build/bdist.linux-aarch64/wheel/./bx/align/tools copying build/lib.linux-aarch64-cpython-313/bx/align/tools/thread.py -> build/bdist.linux-aarch64/wheel/./bx/align/tools copying build/lib.linux-aarch64-cpython-313/bx/align/tools/tile.py -> build/bdist.linux-aarch64/wheel/./bx/align/tools copying build/lib.linux-aarch64-cpython-313/bx/align/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/axt.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/core.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/lav.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/lav_tests.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/maf.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/maf_tests.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/score.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/score_tests.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/epo.py -> build/bdist.linux-aarch64/wheel/./bx/align copying build/lib.linux-aarch64-cpython-313/bx/align/epo_tests.py -> build/bdist.linux-aarch64/wheel/./bx/align creating build/bdist.linux-aarch64/wheel/bx/arrays copying build/lib.linux-aarch64-cpython-313/bx/arrays/wiggle.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/arrays copying build/lib.linux-aarch64-cpython-313/bx/arrays/bed.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/arrays copying build/lib.linux-aarch64-cpython-313/bx/arrays/array_tree.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/arrays copying build/lib.linux-aarch64-cpython-313/bx/arrays/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/arrays copying build/lib.linux-aarch64-cpython-313/bx/arrays/array_tree_tests.py -> build/bdist.linux-aarch64/wheel/./bx/arrays creating build/bdist.linux-aarch64/wheel/bx/bbi copying build/lib.linux-aarch64-cpython-313/bx/bbi/bigbed_file.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/bbi copying build/lib.linux-aarch64-cpython-313/bx/bbi/bigwig_file.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/bbi copying build/lib.linux-aarch64-cpython-313/bx/bbi/bbi_file.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/bbi copying build/lib.linux-aarch64-cpython-313/bx/bbi/cirtree_file.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/bbi copying build/lib.linux-aarch64-cpython-313/bx/bbi/bpt_file.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/bbi copying build/lib.linux-aarch64-cpython-313/bx/bbi/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/bbi copying build/lib.linux-aarch64-cpython-313/bx/bbi/bigwig_tests.py -> build/bdist.linux-aarch64/wheel/./bx/bbi creating build/bdist.linux-aarch64/wheel/bx/cookbook copying build/lib.linux-aarch64-cpython-313/bx/cookbook/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/cookbook copying build/lib.linux-aarch64-cpython-313/bx/cookbook/attribute.py -> build/bdist.linux-aarch64/wheel/./bx/cookbook copying build/lib.linux-aarch64-cpython-313/bx/cookbook/doc_optparse.py -> build/bdist.linux-aarch64/wheel/./bx/cookbook creating build/bdist.linux-aarch64/wheel/bx/intervals copying build/lib.linux-aarch64-cpython-313/bx/intervals/cluster.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/intervals copying build/lib.linux-aarch64-cpython-313/bx/intervals/intersection.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/intervals creating build/bdist.linux-aarch64/wheel/bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/base_coverage.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/complement.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/concat.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/coverage.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/find_clusters.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/intersect.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/join.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/merge.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/quicksect.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/operations/subtract.py -> build/bdist.linux-aarch64/wheel/./bx/intervals/operations copying build/lib.linux-aarch64-cpython-313/bx/intervals/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/intervals copying build/lib.linux-aarch64-cpython-313/bx/intervals/cluster_tests.py -> build/bdist.linux-aarch64/wheel/./bx/intervals copying build/lib.linux-aarch64-cpython-313/bx/intervals/intersection_tests.py -> build/bdist.linux-aarch64/wheel/./bx/intervals copying build/lib.linux-aarch64-cpython-313/bx/intervals/io.py -> build/bdist.linux-aarch64/wheel/./bx/intervals copying build/lib.linux-aarch64-cpython-313/bx/intervals/random_intervals.py -> build/bdist.linux-aarch64/wheel/./bx/intervals creating build/bdist.linux-aarch64/wheel/bx/intseq copying build/lib.linux-aarch64-cpython-313/bx/intseq/ngramcount.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/intseq copying build/lib.linux-aarch64-cpython-313/bx/intseq/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/intseq creating build/bdist.linux-aarch64/wheel/bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/_seekbzip2.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/bgzf.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/bgzf_tests.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/binary_file.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/cdb.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/cdb_tests.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/filecache.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/filecache_tests.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/readlengths.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/seekbzip2.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/seekbzip2_tests.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/seeklzop.py -> build/bdist.linux-aarch64/wheel/./bx/misc copying build/lib.linux-aarch64-cpython-313/bx/misc/seeklzop_tests.py -> build/bdist.linux-aarch64/wheel/./bx/misc creating build/bdist.linux-aarch64/wheel/bx/motif copying build/lib.linux-aarch64-cpython-313/bx/motif/_pwm.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/motif creating build/bdist.linux-aarch64/wheel/bx/motif/io copying build/lib.linux-aarch64-cpython-313/bx/motif/io/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/motif/io copying build/lib.linux-aarch64-cpython-313/bx/motif/io/transfac.py -> build/bdist.linux-aarch64/wheel/./bx/motif/io copying build/lib.linux-aarch64-cpython-313/bx/motif/io/transfac_tests.py -> build/bdist.linux-aarch64/wheel/./bx/motif/io creating build/bdist.linux-aarch64/wheel/bx/motif/logo copying build/lib.linux-aarch64-cpython-313/bx/motif/logo/template.ps -> build/bdist.linux-aarch64/wheel/./bx/motif/logo copying build/lib.linux-aarch64-cpython-313/bx/motif/logo/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/motif/logo copying build/lib.linux-aarch64-cpython-313/bx/motif/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/motif copying build/lib.linux-aarch64-cpython-313/bx/motif/pwm.py -> build/bdist.linux-aarch64/wheel/./bx/motif copying build/lib.linux-aarch64-cpython-313/bx/motif/pwm_tests.py -> build/bdist.linux-aarch64/wheel/./bx/motif creating build/bdist.linux-aarch64/wheel/bx/phylo copying build/lib.linux-aarch64-cpython-313/bx/phylo/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/phylo copying build/lib.linux-aarch64-cpython-313/bx/phylo/newick.py -> build/bdist.linux-aarch64/wheel/./bx/phylo copying build/lib.linux-aarch64-cpython-313/bx/phylo/newick_tests.py -> build/bdist.linux-aarch64/wheel/./bx/phylo copying build/lib.linux-aarch64-cpython-313/bx/phylo/phast.py -> build/bdist.linux-aarch64/wheel/./bx/phylo copying build/lib.linux-aarch64-cpython-313/bx/phylo/phast_tests.py -> build/bdist.linux-aarch64/wheel/./bx/phylo creating build/bdist.linux-aarch64/wheel/bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/_position_weight_matrix.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/pwm_tests.py -> build/bdist.linux-aarch64/wheel/./bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/bed_score_aligned_pwm.py -> build/bdist.linux-aarch64/wheel/./bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/bed_score_aligned_string.py -> build/bdist.linux-aarch64/wheel/./bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/maf_select_motifs.py -> build/bdist.linux-aarch64/wheel/./bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/position_weight_matrix.py -> build/bdist.linux-aarch64/wheel/./bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/pwm_score_motifs.py -> build/bdist.linux-aarch64/wheel/./bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/pwm_score_positions.py -> build/bdist.linux-aarch64/wheel/./bx/pwm copying build/lib.linux-aarch64-cpython-313/bx/pwm/pwm_score_maf.py -> build/bdist.linux-aarch64/wheel/./bx/pwm creating build/bdist.linux-aarch64/wheel/bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/_twobit.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/_nib.cpython-313-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/core.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/fasta.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/fasta_tests.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/nib.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/nib_tests.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/qdna.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/qdna_tests.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/seq.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/seq_tests.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/twobit.py -> build/bdist.linux-aarch64/wheel/./bx/seq copying build/lib.linux-aarch64-cpython-313/bx/seq/twobit_tests.py -> build/bdist.linux-aarch64/wheel/./bx/seq creating build/bdist.linux-aarch64/wheel/bx/tabular copying build/lib.linux-aarch64-cpython-313/bx/tabular/__init__.py -> build/bdist.linux-aarch64/wheel/./bx/tabular copying build/lib.linux-aarch64-cpython-313/bx/tabular/io.py -> build/bdist.linux-aarch64/wheel/./bx/tabular copying build/lib.linux-aarch64-cpython-313/bx/__init__.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/binned_array.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/binned_array_tests.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/bitset_builders.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/bitset_tests.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/bitset_utils.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/filter.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/gene_reader.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/interval_index_file_tests.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/seqmapping.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/seqmapping_tests.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/wiggle.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/wiggle_tests.py -> build/bdist.linux-aarch64/wheel/./bx copying build/lib.linux-aarch64-cpython-313/bx/interval_index_file.py -> build/bdist.linux-aarch64/wheel/./bx creating build/bdist.linux-aarch64/wheel/bx_extras copying build/lib.linux-aarch64-cpython-313/bx_extras/__init__.py -> build/bdist.linux-aarch64/wheel/./bx_extras copying build/lib.linux-aarch64-cpython-313/bx_extras/fpconst.py -> build/bdist.linux-aarch64/wheel/./bx_extras copying build/lib.linux-aarch64-cpython-313/bx_extras/fpconst_tests.py -> build/bdist.linux-aarch64/wheel/./bx_extras copying build/lib.linux-aarch64-cpython-313/bx_extras/lrucache.py -> build/bdist.linux-aarch64/wheel/./bx_extras copying build/lib.linux-aarch64-cpython-313/bx_extras/pstat.py -> build/bdist.linux-aarch64/wheel/./bx_extras copying build/lib.linux-aarch64-cpython-313/bx_extras/stats.py -> build/bdist.linux-aarch64/wheel/./bx_extras running install_egg_info running egg_info creating lib/bx_python.egg-info writing lib/bx_python.egg-info/PKG-INFO writing dependency_links to lib/bx_python.egg-info/dependency_links.txt writing requirements to lib/bx_python.egg-info/requires.txt writing top-level names to lib/bx_python.egg-info/top_level.txt writing manifest file 'lib/bx_python.egg-info/SOURCES.txt' reading manifest file 'lib/bx_python.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'lib/bx_python.egg-info/SOURCES.txt' Copying lib/bx_python.egg-info to build/bdist.linux-aarch64/wheel/./bx_python-0.13.0.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/gene_fourfold_sites.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/aggregate_scores_in_intervals.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/align_print_template.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/axt_extract_ranges.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/axt_to_fasta.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/axt_to_lav.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/axt_to_maf.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_bigwig_profile.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_build_windows.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_complement.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_count_by_interval.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_count_overlapping.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_coverage.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_coverage_by_interval.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_diff_basewise_summary.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_extend_to.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_intersect.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_intersect_basewise.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_merge_overlapping.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_rand_intersect.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bed_subtract_basewise.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/bnMapper.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/div_snp_table_chr.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/find_in_sorted_file.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/get_scores_in_intervals.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/int_seqs_to_char_strings.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/interval_count_intersections.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/interval_join.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/lav_to_axt.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/lav_to_maf.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/line_select.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/lzop_build_offset_table.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/mMK_bitset.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_build_index.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_chop.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_chunk.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_col_counts.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_col_counts_all.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_count.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_covered_ranges.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_covered_regions.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_div_sites.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_drop_overlapping.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_extract_chrom_ranges.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_extract_ranges.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_extract_ranges_indexed.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_filter.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_filter_max_wc.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_gap_frequency.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_gc_content.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_interval_alignibility.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_limit_to_species.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_mapping_word_frequency.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_mask_cpg.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_mean_length_ungapped_piece.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_percent_columns_matching.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_percent_identity.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_print_chroms.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_print_scores.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_randomize.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_region_coverage_by_src.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_select.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_shuffle_columns.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_species_in_all_files.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_split_by_src.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_thread_for_species.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_tile.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_tile_2.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_tile_2bit.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_to_axt.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_to_concat_fasta.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_to_fasta.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_to_int_seqs.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_translate_chars.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_truncate.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/maf_word_frequency.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/mask_quality.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/nib_chrom_intervals_to_fasta.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/nib_intervals_to_fasta.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/nib_length.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/one_field_per_line.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/out_to_chain.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/prefix_lines.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/pretty_table.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/qv_to_bqv.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/random_lines.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/table_add_column.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/table_filter.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/tfloc_summary.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/ucsc_gene_table_to_intervals.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/wiggle_to_array_tree.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/wiggle_to_binned_array.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/wiggle_to_chr_binned_array.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts copying build/scripts-3.13/wiggle_to_simple.py -> build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/gene_fourfold_sites.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/aggregate_scores_in_intervals.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/align_print_template.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/axt_extract_ranges.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/axt_to_fasta.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/axt_to_lav.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/axt_to_maf.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_bigwig_profile.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_build_windows.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_complement.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_count_by_interval.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_count_overlapping.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_coverage.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_coverage_by_interval.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_diff_basewise_summary.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_extend_to.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_intersect.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_intersect_basewise.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_merge_overlapping.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_rand_intersect.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bed_subtract_basewise.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/bnMapper.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/div_snp_table_chr.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/find_in_sorted_file.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/get_scores_in_intervals.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/int_seqs_to_char_strings.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/interval_count_intersections.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/interval_join.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/lav_to_axt.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/lav_to_maf.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/line_select.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/lzop_build_offset_table.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/mMK_bitset.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_build_index.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_chop.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_chunk.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_col_counts.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_col_counts_all.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_count.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_covered_ranges.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_covered_regions.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_div_sites.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_drop_overlapping.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_extract_chrom_ranges.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_extract_ranges.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_extract_ranges_indexed.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_filter.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_filter_max_wc.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_gap_frequency.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_gc_content.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_interval_alignibility.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_limit_to_species.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_mapping_word_frequency.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_mask_cpg.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_mean_length_ungapped_piece.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_percent_columns_matching.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_percent_identity.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_print_chroms.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_print_scores.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_randomize.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_region_coverage_by_src.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_select.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_shuffle_columns.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_species_in_all_files.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_split_by_src.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_thread_for_species.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_tile.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_tile_2.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_tile_2bit.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_to_axt.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_to_concat_fasta.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_to_fasta.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_to_int_seqs.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_translate_chars.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_truncate.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/maf_word_frequency.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/mask_quality.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/nib_chrom_intervals_to_fasta.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/nib_intervals_to_fasta.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/nib_length.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/one_field_per_line.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/out_to_chain.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/prefix_lines.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/pretty_table.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/qv_to_bqv.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/random_lines.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/table_add_column.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/table_filter.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/tfloc_summary.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/ucsc_gene_table_to_intervals.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/wiggle_to_array_tree.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/wiggle_to_binned_array.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/wiggle_to_chr_binned_array.py to 755 changing mode of build/bdist.linux-aarch64/wheel/bx_python-0.13.0.data/scripts/wiggle_to_simple.py to 755 creating build/bdist.linux-aarch64/wheel/bx_python-0.13.0.dist-info/WHEEL creating '/build/reproducible-path/python-bx-0.13.0/.pybuild/cpython3_3.13_bx-python/.tmp-m_f5fmyj/bx_python-0.13.0-cp313-cp313-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'bx/__init__.py' adding 'bx/_seqmapping.cpython-313-aarch64-linux-gnu.so' adding 'bx/binned_array.py' adding 'bx/binned_array_tests.py' adding 'bx/bitset.cpython-313-aarch64-linux-gnu.so' adding 'bx/bitset_builders.py' adding 'bx/bitset_tests.py' adding 'bx/bitset_utils.py' adding 'bx/filter.py' adding 'bx/gene_reader.py' adding 'bx/interval_index_file.py' adding 'bx/interval_index_file_tests.py' adding 'bx/seqmapping.py' adding 'bx/seqmapping_tests.py' adding 'bx/wiggle.py' adding 'bx/wiggle_tests.py' adding 'bx/align/__init__.py' adding 'bx/align/_core.cpython-313-aarch64-linux-gnu.so' adding 'bx/align/_epo.cpython-313-aarch64-linux-gnu.so' adding 'bx/align/axt.py' adding 'bx/align/core.py' adding 'bx/align/epo.py' adding 'bx/align/epo_tests.py' adding 'bx/align/lav.py' adding 'bx/align/lav_tests.py' adding 'bx/align/maf.py' adding 'bx/align/maf_tests.py' adding 'bx/align/score.py' adding 'bx/align/score_tests.py' adding 'bx/align/sitemask/__init__.py' adding 'bx/align/sitemask/_cpg.cpython-313-aarch64-linux-gnu.so' adding 'bx/align/sitemask/core.py' adding 'bx/align/sitemask/cpg.py' adding 'bx/align/sitemask/quality.py' adding 'bx/align/sitemask/sitemask_tests.py' adding 'bx/align/tools/__init__.py' adding 'bx/align/tools/chop.py' adding 'bx/align/tools/fuse.py' adding 'bx/align/tools/thread.py' adding 'bx/align/tools/tile.py' adding 'bx/arrays/__init__.py' adding 'bx/arrays/array_tree.cpython-313-aarch64-linux-gnu.so' adding 'bx/arrays/array_tree_tests.py' adding 'bx/arrays/bed.cpython-313-aarch64-linux-gnu.so' adding 'bx/arrays/wiggle.cpython-313-aarch64-linux-gnu.so' adding 'bx/bbi/__init__.py' adding 'bx/bbi/bbi_file.cpython-313-aarch64-linux-gnu.so' adding 'bx/bbi/bigbed_file.cpython-313-aarch64-linux-gnu.so' adding 'bx/bbi/bigwig_file.cpython-313-aarch64-linux-gnu.so' adding 'bx/bbi/bigwig_tests.py' adding 'bx/bbi/bpt_file.cpython-313-aarch64-linux-gnu.so' adding 'bx/bbi/cirtree_file.cpython-313-aarch64-linux-gnu.so' adding 'bx/cookbook/__init__.py' adding 'bx/cookbook/attribute.py' adding 'bx/cookbook/doc_optparse.py' adding 'bx/intervals/__init__.py' adding 'bx/intervals/cluster.cpython-313-aarch64-linux-gnu.so' adding 'bx/intervals/cluster_tests.py' adding 'bx/intervals/intersection.cpython-313-aarch64-linux-gnu.so' adding 'bx/intervals/intersection_tests.py' adding 'bx/intervals/io.py' adding 'bx/intervals/random_intervals.py' adding 'bx/intervals/operations/__init__.py' adding 'bx/intervals/operations/base_coverage.py' adding 'bx/intervals/operations/complement.py' adding 'bx/intervals/operations/concat.py' adding 'bx/intervals/operations/coverage.py' adding 'bx/intervals/operations/find_clusters.py' adding 'bx/intervals/operations/intersect.py' adding 'bx/intervals/operations/join.py' adding 'bx/intervals/operations/merge.py' adding 'bx/intervals/operations/quicksect.py' adding 'bx/intervals/operations/subtract.py' adding 'bx/intseq/__init__.py' adding 'bx/intseq/ngramcount.cpython-313-aarch64-linux-gnu.so' adding 'bx/misc/__init__.py' adding 'bx/misc/_seekbzip2.cpython-313-aarch64-linux-gnu.so' adding 'bx/misc/bgzf.cpython-313-aarch64-linux-gnu.so' adding 'bx/misc/bgzf_tests.py' adding 'bx/misc/binary_file.py' adding 'bx/misc/cdb.py' adding 'bx/misc/cdb_tests.py' adding 'bx/misc/filecache.py' adding 'bx/misc/filecache_tests.py' adding 'bx/misc/readlengths.py' adding 'bx/misc/seekbzip2.py' adding 'bx/misc/seekbzip2_tests.py' adding 'bx/misc/seeklzop.py' adding 'bx/misc/seeklzop_tests.py' adding 'bx/motif/__init__.py' adding 'bx/motif/_pwm.cpython-313-aarch64-linux-gnu.so' adding 'bx/motif/pwm.py' adding 'bx/motif/pwm_tests.py' adding 'bx/motif/io/__init__.py' adding 'bx/motif/io/transfac.py' adding 'bx/motif/io/transfac_tests.py' adding 'bx/motif/logo/__init__.py' adding 'bx/motif/logo/template.ps' adding 'bx/phylo/__init__.py' adding 'bx/phylo/newick.py' adding 'bx/phylo/newick_tests.py' adding 'bx/phylo/phast.py' adding 'bx/phylo/phast_tests.py' adding 'bx/pwm/__init__.py' adding 'bx/pwm/_position_weight_matrix.cpython-313-aarch64-linux-gnu.so' adding 'bx/pwm/bed_score_aligned_pwm.py' adding 'bx/pwm/bed_score_aligned_string.py' adding 'bx/pwm/maf_select_motifs.py' adding 'bx/pwm/position_weight_matrix.py' adding 'bx/pwm/pwm_score_maf.py' adding 'bx/pwm/pwm_score_motifs.py' adding 'bx/pwm/pwm_score_positions.py' adding 'bx/pwm/pwm_tests.py' adding 'bx/seq/__init__.py' adding 'bx/seq/_nib.cpython-313-aarch64-linux-gnu.so' adding 'bx/seq/_twobit.cpython-313-aarch64-linux-gnu.so' adding 'bx/seq/core.py' adding 'bx/seq/fasta.py' adding 'bx/seq/fasta_tests.py' adding 'bx/seq/nib.py' adding 'bx/seq/nib_tests.py' adding 'bx/seq/qdna.py' adding 'bx/seq/qdna_tests.py' adding 'bx/seq/seq.py' adding 'bx/seq/seq_tests.py' adding 'bx/seq/twobit.py' adding 'bx/seq/twobit_tests.py' adding 'bx/tabular/__init__.py' adding 'bx/tabular/io.py' adding 'bx_extras/__init__.py' adding 'bx_extras/fpconst.py' adding 'bx_extras/fpconst_tests.py' adding 'bx_extras/lrucache.py' adding 'bx_extras/pstat.py' adding 'bx_extras/stats.py' adding 'bx_python-0.13.0.data/scripts/aggregate_scores_in_intervals.py' adding 'bx_python-0.13.0.data/scripts/align_print_template.py' adding 'bx_python-0.13.0.data/scripts/axt_extract_ranges.py' adding 'bx_python-0.13.0.data/scripts/axt_to_fasta.py' adding 'bx_python-0.13.0.data/scripts/axt_to_lav.py' adding 'bx_python-0.13.0.data/scripts/axt_to_maf.py' adding 'bx_python-0.13.0.data/scripts/bed_bigwig_profile.py' adding 'bx_python-0.13.0.data/scripts/bed_build_windows.py' adding 'bx_python-0.13.0.data/scripts/bed_complement.py' adding 'bx_python-0.13.0.data/scripts/bed_count_by_interval.py' adding 'bx_python-0.13.0.data/scripts/bed_count_overlapping.py' adding 'bx_python-0.13.0.data/scripts/bed_coverage.py' adding 'bx_python-0.13.0.data/scripts/bed_coverage_by_interval.py' adding 'bx_python-0.13.0.data/scripts/bed_diff_basewise_summary.py' adding 'bx_python-0.13.0.data/scripts/bed_extend_to.py' adding 'bx_python-0.13.0.data/scripts/bed_intersect.py' adding 'bx_python-0.13.0.data/scripts/bed_intersect_basewise.py' adding 'bx_python-0.13.0.data/scripts/bed_merge_overlapping.py' adding 'bx_python-0.13.0.data/scripts/bed_rand_intersect.py' adding 'bx_python-0.13.0.data/scripts/bed_subtract_basewise.py' adding 'bx_python-0.13.0.data/scripts/bnMapper.py' adding 'bx_python-0.13.0.data/scripts/div_snp_table_chr.py' adding 'bx_python-0.13.0.data/scripts/find_in_sorted_file.py' adding 'bx_python-0.13.0.data/scripts/gene_fourfold_sites.py' adding 'bx_python-0.13.0.data/scripts/get_scores_in_intervals.py' adding 'bx_python-0.13.0.data/scripts/int_seqs_to_char_strings.py' adding 'bx_python-0.13.0.data/scripts/interval_count_intersections.py' adding 'bx_python-0.13.0.data/scripts/interval_join.py' adding 'bx_python-0.13.0.data/scripts/lav_to_axt.py' adding 'bx_python-0.13.0.data/scripts/lav_to_maf.py' adding 'bx_python-0.13.0.data/scripts/line_select.py' adding 'bx_python-0.13.0.data/scripts/lzop_build_offset_table.py' adding 'bx_python-0.13.0.data/scripts/mMK_bitset.py' adding 'bx_python-0.13.0.data/scripts/maf_build_index.py' adding 'bx_python-0.13.0.data/scripts/maf_chop.py' adding 'bx_python-0.13.0.data/scripts/maf_chunk.py' adding 'bx_python-0.13.0.data/scripts/maf_col_counts.py' adding 'bx_python-0.13.0.data/scripts/maf_col_counts_all.py' adding 'bx_python-0.13.0.data/scripts/maf_count.py' adding 'bx_python-0.13.0.data/scripts/maf_covered_ranges.py' adding 'bx_python-0.13.0.data/scripts/maf_covered_regions.py' adding 'bx_python-0.13.0.data/scripts/maf_div_sites.py' adding 'bx_python-0.13.0.data/scripts/maf_drop_overlapping.py' adding 'bx_python-0.13.0.data/scripts/maf_extract_chrom_ranges.py' adding 'bx_python-0.13.0.data/scripts/maf_extract_ranges.py' adding 'bx_python-0.13.0.data/scripts/maf_extract_ranges_indexed.py' adding 'bx_python-0.13.0.data/scripts/maf_filter.py' adding 'bx_python-0.13.0.data/scripts/maf_filter_max_wc.py' adding 'bx_python-0.13.0.data/scripts/maf_gap_frequency.py' adding 'bx_python-0.13.0.data/scripts/maf_gc_content.py' adding 'bx_python-0.13.0.data/scripts/maf_interval_alignibility.py' adding 'bx_python-0.13.0.data/scripts/maf_limit_to_species.py' adding 'bx_python-0.13.0.data/scripts/maf_mapping_word_frequency.py' adding 'bx_python-0.13.0.data/scripts/maf_mask_cpg.py' adding 'bx_python-0.13.0.data/scripts/maf_mean_length_ungapped_piece.py' adding 'bx_python-0.13.0.data/scripts/maf_percent_columns_matching.py' adding 'bx_python-0.13.0.data/scripts/maf_percent_identity.py' adding 'bx_python-0.13.0.data/scripts/maf_print_chroms.py' adding 'bx_python-0.13.0.data/scripts/maf_print_scores.py' adding 'bx_python-0.13.0.data/scripts/maf_randomize.py' adding 'bx_python-0.13.0.data/scripts/maf_region_coverage_by_src.py' adding 'bx_python-0.13.0.data/scripts/maf_select.py' adding 'bx_python-0.13.0.data/scripts/maf_shuffle_columns.py' adding 'bx_python-0.13.0.data/scripts/maf_species_in_all_files.py' adding 'bx_python-0.13.0.data/scripts/maf_split_by_src.py' adding 'bx_python-0.13.0.data/scripts/maf_thread_for_species.py' adding 'bx_python-0.13.0.data/scripts/maf_tile.py' adding 'bx_python-0.13.0.data/scripts/maf_tile_2.py' adding 'bx_python-0.13.0.data/scripts/maf_tile_2bit.py' adding 'bx_python-0.13.0.data/scripts/maf_to_axt.py' adding 'bx_python-0.13.0.data/scripts/maf_to_concat_fasta.py' adding 'bx_python-0.13.0.data/scripts/maf_to_fasta.py' adding 'bx_python-0.13.0.data/scripts/maf_to_int_seqs.py' adding 'bx_python-0.13.0.data/scripts/maf_translate_chars.py' adding 'bx_python-0.13.0.data/scripts/maf_truncate.py' adding 'bx_python-0.13.0.data/scripts/maf_word_frequency.py' adding 'bx_python-0.13.0.data/scripts/mask_quality.py' adding 'bx_python-0.13.0.data/scripts/nib_chrom_intervals_to_fasta.py' adding 'bx_python-0.13.0.data/scripts/nib_intervals_to_fasta.py' adding 'bx_python-0.13.0.data/scripts/nib_length.py' adding 'bx_python-0.13.0.data/scripts/one_field_per_line.py' adding 'bx_python-0.13.0.data/scripts/out_to_chain.py' adding 'bx_python-0.13.0.data/scripts/prefix_lines.py' adding 'bx_python-0.13.0.data/scripts/pretty_table.py' adding 'bx_python-0.13.0.data/scripts/qv_to_bqv.py' adding 'bx_python-0.13.0.data/scripts/random_lines.py' adding 'bx_python-0.13.0.data/scripts/table_add_column.py' adding 'bx_python-0.13.0.data/scripts/table_filter.py' adding 'bx_python-0.13.0.data/scripts/tfloc_summary.py' adding 'bx_python-0.13.0.data/scripts/ucsc_gene_table_to_intervals.py' adding 'bx_python-0.13.0.data/scripts/wiggle_to_array_tree.py' adding 'bx_python-0.13.0.data/scripts/wiggle_to_binned_array.py' adding 'bx_python-0.13.0.data/scripts/wiggle_to_chr_binned_array.py' adding 'bx_python-0.13.0.data/scripts/wiggle_to_simple.py' adding 'bx_python-0.13.0.dist-info/licenses/LICENSE' adding 'bx_python-0.13.0.dist-info/METADATA' adding 'bx_python-0.13.0.dist-info/WHEEL' adding 'bx_python-0.13.0.dist-info/top_level.txt' adding 'bx_python-0.13.0.dist-info/RECORD' removing build/bdist.linux-aarch64/wheel Successfully built bx_python-0.13.0-cp313-cp313-linux_aarch64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-bx-0.13.0/.pybuild/cpython3_3.13_bx-python/build; python3.13 -m pytest ============================= test session starts ============================== platform linux -- Python 3.13.8, pytest-8.4.2, pluggy-1.6.0 rootdir: /build/reproducible-path/python-bx-0.13.0/.pybuild/cpython3_3.13_bx-python/build configfile: pytest.ini plugins: cython-0.3.1, typeguard-4.4.4 collected 139 items bx/align/epo_tests.py ..... [ 3%] bx/align/lav_tests.py . [ 4%] bx/align/maf_tests.py ........ [ 10%] bx/align/score_tests.py ..... [ 13%] bx/align/sitemask/sitemask_tests.py ... [ 15%] bx/align/tools/fuse.py . [ 16%] bx/align/tools/thread.py . [ 17%] bx/arrays/array_tree_tests.py ...... [ 21%] bx/bbi/bigwig_tests.py ........................... [ 41%] bx/binned_array_tests.py .... [ 43%] bx/bitset_tests.py .................. [ 56%] bx/interval_index_file_tests.py ... [ 58%] bx/intervals/cluster_tests.py ............. [ 68%] bx/intervals/intersection_tests.py ............. [ 77%] bx/intervals/io.py .. [ 79%] bx/misc/bgzf_tests.py . [ 79%] bx/misc/cdb_tests.py . [ 80%] bx/motif/io/transfac_tests.py . [ 81%] bx/motif/pwm_tests.py ... [ 83%] bx/phylo/newick_tests.py ........ [ 89%] bx/phylo/phast_tests.py . [ 89%] bx/pwm/pwm_tests.py . [ 90%] bx/seq/fasta_tests.py . [ 91%] bx/seq/nib_tests.py . [ 92%] bx/seq/qdna_tests.py . [ 92%] bx/seq/seq_tests.py .... [ 95%] bx/seq/twobit_tests.py ... [ 97%] bx/wiggle_tests.py .. [ 99%] bx_extras/fpconst_tests.py . [100%] =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/_pytest/config/__init__.py:1533 /usr/lib/python3/dist-packages/_pytest/config/__init__.py:1533: PytestConfigWarning: No files were found in testpaths; consider removing or adjusting your testpaths configuration. Searching recursively from the current directory instead. self.args, self.args_source = self._decide_args( bx/bbi/bigwig_tests.py::TestBigWig::test_summary_from_file[chr1 10000 12000 10 mean n/a n/a n/a n/a -0.164968 -0.194169 -0.0533029 0.00390226 -0.00226906 -0.0365958\n] bx/bbi/bigwig_tests.py::TestBigWig::test_summary_from_file[chr1 10000 20000 100 mean n/a n/a n/a n/a n/a n/a n/a n/a n/a -0.163546 -0.272118 -0.127111 -0.116169 0.0202627 -0.0243522 0.0349913 -0.0054408 -0.00101548 -0.0307148 -0.0374406 -0.0024669 -0.034042 -0.0343892 -0.0199075 -0.0406878 -0.0322236 -0.080479 -0.235991 -0.0897865 -0.041593 0.019942 -0.0608448 0.0144338 -0.0348468 0.0195101 -0.0555526 -0.0892809 0.011672 -0.173894 -0.0849444 0.0718796 0.0608432 0.0313183 0.0439315 -0.0242363 0.03288 0.0318241 0.122005 0.0879138 0.00102565 0.0334753 -0.00263047 -0.103023 -0.0275437 0.0958326 0.0147229 -0.0629772 0.00541821 0.062474 0.069069 -0.0389339 0.0206174 0.0278476 -0.0182009 0.00568736 0.000397305 0.13104 0.105984 -0.00662042 0.143469 0.111045 0.0322849 0.11452 0.0865186 0.055436 0.141388 0.103004 -0.00350213 0.053879 0.10582 0.0983312 -0.0351239 0.10085 0.110439 0.0451646 -0.00949231 0.0487825 0.042197 -0.00328549 -0.00851082 -0.0437525 0.0618735 -0.0315407 -0.00756448 -0.0523631 0.0432315 0.0228745 0.106009 0.0299314 0.0473805\n] bx/bbi/bigwig_tests.py::TestBigWig::test_summary_from_file[chr1 10000 12000 100 mean n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a 0.0508425 0.0508425 -0.0768488 -0.189129 -0.439008 -0.182524 -0.304712 -0.197935 -0.462124 -0.194633 -0.2882 -0.0570346 -0.0724456 -0.301409 0.0508425 -0.0702441 -0.182524 0.0508425 0.0508425 -0.55459 0.0508425 0.0508425 0.0508425 0.0508425 0.00460946 -0.0152047 -0.0152047 -0.095562 -0.0570346 0.0695559 0.127898 0.000206554 -0.013003 0.0167182 -0.0559341 0.0508425 0.0904709 0.101479 -0.155005 -0.0812521 0.0145168 0.0992772 0.10368 -0.155005 0.002408 -0.0911592 -0.0768488 0.013416 -0.00529754 -0.0702443 0.0013071 -0.0702442 0.0919354 -0.101144 -0.000301097\n] bx/bbi/bigwig_tests.py::TestBigWig::test_summary_from_file[chr1 10000 20000 1000 mean n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a 0.0508425 0.0508425 0.0508425 0.0112142 -0.164912 -0.206742 -0.171516 -0.671274 -0.206741 -0.415891 0.0508425 -0.411489 -0.197936 0.0508425 -0.446713 -0.219951 -0.704298 -0.200137 -0.189129 -0.41369 -0.162711 0.0508425 -0.164912 -0.195734 0.0508425 -0.440108 -0.162711 0.0508425 0.0508425 0.0508425 -0.191331 -0.200137 -0.164912 0.0508425 0.0508425 0.0508425 0.0508425 -0.909043 -0.200137 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0244236 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.00199526 -0.189129 -0.164912 0.0508425 0.0508425 0.0882693 0.0310285 0.224767 0.136704 -0.136291 -0.237564 0.211558 -0.0174062 0.0508425 0.0508425 -0.162711 0.0508425 0.0508425 0.0772615 0.10368 0.0992772 0.10368 -0.257378 -0.0526318 0.10368 -0.266185 -0.0812515 0.110285 0.0992772 0.0992772 0.101479 0.105882 -0.248571 -0.061438 -0.103268 0.108084 0.10368 -0.285999 -0.0944612 -0.0592364 -0.0746468 0.101479 -0.109872 0.0992773 -0.0592366 -0.081252 -0.0988646 0.101479 -0.081252 -0.0592364 0.0932488 0.090622 -0.0945312 -0.107756 0.090622 -0.0912242 -0.511124 0.090622 -0.0912242 0.090622 -0.117675 0.090622 0.090622 0.222874 0.269162 -0.253234 0.0873158 -0.27307 -0.0284048 0.222874 0.0278022 -0.107756 -0.140819 -0.173882 0.0410276 0.0707842 -0.117675 -0.319359 0.090622 0.090622 -0.120981 0.090622 -0.0746932 -0.226782 0.090622 0.090622 0.090622 -0.0680802 -0.114368 0.090622 -0.0680802 -0.0680802 0.090622 -0.120981 0.090622 -0.296214 0.090622 0.090622 0.090622 -0.438387 -0.0912242 0.090622 0.090622 -0.117675 -0.0978372 0.090622 -0.117675 0.090622 -0.0680802 -0.107756 -0.0945312 0.090622 -0.0680802 -0.101143 -0.0680802 0.090622 0.090622 0.090622 -0.0945312 0.090622 -0.408629 0.090622 -0.0680802 -0.494593 0.090622 -0.319358 0.090622 -0.319358 0.090622 -0.259846 -0.233395 -0.114368 -0.319359 -0.686359 -0.107756 -0.474756 -0.28299 0.090622 0.0773968 -0.107756 0.090622 -0.107756 0.090622 -0.259846 -0.478062 0.090622 0.090622 0.090622 -0.0746932 -0.117675 -0.256539 -0.0383235 -0.0011127 0.0142796 -0.278874 0.180914 0.0081078 0.168571 0.0358806 0.0327948 0.0327948 -0.0937244 0.177828 -0.0937246 -0.118411 0.0420518 0.171657 -0.349848 0.0420524 -0.127668 0.171657 -0.121496 -0.349849 0.171657 0.0111938 -0.288131 -0.306647 0.0420518 0.0451376 0.0358806 0.168571 0.03588 0.0451376 0.029709 0.165485 -0.130754 -0.39305 0.171657 -0.189385 -0.278874 0.0420518 -0.149269 0.171657 0.03588 0.168571 0.0389658 0.0327948 0.177828 -0.275788 0.168571 0.0358806 0.165485 0.0050226 0.020451 -0.109154 0.171657 -0.368363 -0.152355 0.0482234 -0.0998962 -0.315903 0.174743 0.0266226 -0.106067 0.168571 0.0050226 0.171657 -0.118411 0.0451376 0.0358802 -0.130754 -0.263445 -0.235672 -0.093725 -0.115326 -0.346762 0.0266226 0.174743 0.168571 -0.11224 -0.0937244 -0.405394 0.174743 0.165485 0.171657 0.0019368 0.174743 -0.140012 -0.254188 -0.248016 -0.167784 -0.294303 -0.751005 0.0358806 -0.007321 -0.130754 -0.13384 -0.433165 0.171657 -0.084467 -0.121497 -0.0844674 0.168571 -0.11841 -0.204814 0.0144358 0.175076 0.0203854 0.0025374 0.175076 0.172101 0.169126 0.0322848 0.175076 -0.12538 0.005512 -0.238422 -0.122404 0.169126 0.0084868 0.0174106 0.169126 0.160202 0.175076 0.169126 0.0174114 0.0114618 0.166151 0.0322848 0.17805 0.172101 -0.146203 -0.131329 0.169126 -0.0956314 -0.00638721 0.0471594 -0.0956314 0.172101 0.0263356 0.0293106 0.02931 0.169126 -0.101581 -0.0034124 0.10963 0.0947559 0.0947559 -0.0926567 -0.113481 0.0947559 0.0947559 -0.324691 -0.0986067 -0.0867067 0.0947559 0.0947559 0.0947559 0.0947559 0.175076 0.0174106 0.172101 -0.134303 -0.12538 0.0055116 0.0293106 -0.0986064 -0.18785 -0.11348 0.0441846 0.0114618 0.0412098 0.0412098 0.17805 0.169126 0.0471594 0.169126 0.0322852 0.172101 0.175076 0.0501342 0.172101 0.169126 0.17805 0.172101 0.0412092 0.0382344 0.172101 0.172101 0.169126 0.172101 0.172101 0.172101 -0.110506 -0.262221 0.160202 0.166151 0.169126 -0.128354 -0.49723 0.0501342 -0.101582 0.0263356 0.0352596 0.169126 0.166151 0.169126 -0.101529 0.162854 0.162854 0.0227586 0.0333316 0.162854 0.15228 -0.453037 0.0333312 -0.0406811 0.0227586 0.173427 0.16814 -0.11205 -0.11205 0.162854 -0.138483 -0.0961902 0.00689821 -0.466254 -0.11205 -0.262719 -0.0961908 -0.114694 0.16814 -0.38431 -0.178132 0.162854 0.157567 0.16814 0.0201152 0.162854 0.157567 0.025402 0.157567 0.0227586 -0.225713 -0.786094 0.0333318 0.157567 0.009542 0.0333318 0.146994 0.00425521 0.16814 0.15228 0.141707 0.16814 0.00954181 0.0227586 -0.246859 0.0227586 0.15228 -0.001031 0.00425521 -0.143769 0.0227586 0.162854 0.157567 0.0042556 -0.260075 -0.0036752 0.0148286 -0.138484 0.0359752 -0.00103139 0.0333312 -0.109407 -0.233642 0.173427 -0.249502 -0.00103139 0.0439048 -0.238929 0.157567 0.0439048 -0.231 0.178713 0.162854 0.162854 -0.164916 0.162854 0.157567 0.0333312 0.0386182 0.162854 0.0333318 0.0333312 0.0227586 0.0386178 0.0042548 0.0280446 0.0386182 0.16814 0.0439048 0.0095422 0.16814 0.0333316 0.0201152 0.16814 -0.154343 0.162854 0.162465 -0.0009215 0.0293935 -0.473835 -0.091866 -0.097929 0.026362 0.0627401 0.0930551 -0.128244 -0.103992 0.0112045 -0.134307 0.171874 -0.122181 0.177937 0.165811 0.0930551 0.0930551 0.153685 -0.349543 0.0081735 0.0354565 0.168843 0.168843 -0.131276 -0.14037 -0.164622 -0.155527 0.16278 0.0112045 0.16278 0.014236 -0.173717 -0.128244 0.171874 -0.0069845 0.171874 -0.258598 0.0112045 -0.152496 0.0293935 0.0324255 0.0233305 0.165811 0.159748 0.029394 0.00211 -0.113087 0.0384885 0.00514151 -0.107024 0.0445515 0.0051415 -0.134308 0.0293935 0.168843 0.171874 0.165811 0.159748 0.04152 0.177937 0.171874 0.180969 0.0293935 0.0354565 0.174906 0.171874 0.0112045 0.177937 0.047583 0.165811 0.171874 0.165811 0.165811 0.171874 -0.152496 -0.091866 0.174906 -0.152497 -0.234346 -0.125212 -0.094897 -0.0948975 0.171874 0.168843 0.171874 0.171874 0.174906 0.174906 0.180969 -0.0979295 0.168843 0.168843 0.177937 0.174906 -0.000921503 0.165811 0.174906 0.174906 0.165811 0.026362 0.174906 0.0312215 0.168098 -0.000202395 0.172073 0.176049 0.160146 0.0157002 0.172073 0.164122 -0.132723 -0.155251 0.0342532 -0.0956156 0.0276268 0.0157002 -0.0995912 0.0448544 0.164122 0.172073 0.164122 0.164122 0.164122 0.168098 0.0302776 0.172073 0.168098 0.156171 0.0329272 0.176049 0.0223264 0.0289524 -0.0929658 0.172073 0.168098 0.0064232 0.172073 -0.103567 0.034253 0.172073 -0.148625 0.172073 0.0461798 0.0077488 0.176049 0.160146 0.168098 0.164122 0.168098 0.172073 0.168098 0.0501554 0.176049 0.176049 0.0103988 0.160146 0.172073 0.160146 0.168098 0.168098 0.164122 0.172073 0.164122 -0.267892 -0.108869 -0.0916402 0.0382286 -0.000201996 0.164122 0.0369032 0.0395532 0.168098 0.0130492 -0.289096 0.002448 0.0369032 0.0156998 0.172073 0.168098 -0.0956158 0.176049 0.168098 0.168098 -0.299697 -0.104892 0.0117244 0.168098 -0.0823646 0.176049 0.168098 0.168098 0.180024 0.0342532 0.176049 0.0117244 0.160146 0.164122 0.0103988 0.0183508 0.164122 0.164122 0.168098 0.168098 -0.0194568 0.169813 -0.135216 0.155625 0.165084 -0.109205 -0.0950181 -0.239256 -0.229798 -0.0973833 0.0397617 0.165084 0.169813 0.0350326 0.0350326 0.169813 0.0350326 0.0350327 0.0255746 0.165084 0.165084 0.155625 0.160355 0.169813 0.160355 0.165084 0.0397617 0.169813 0.0350327 0.165084 0.0303037 0.0066574 0.169813 0.174542 -0.137581 0.0350327 0.0208455 0.0137508 0.0397617 0.169813 -0.139945 0.0350327 0.169813 -0.118664 -0.139945 0.0208447 -0.00280059 0.0184806 0.169813 -0.267632 0.0255746 0.165084 -0.0997473 0.0113867 0.0066576 0.0208455 0.165084 0.0161158 0.160355 0.150896 0.155625 -0.139945 0.160354 -0.0051655 0.160355 0.0161156 -0.274725 0.165084 -0.27709 0.169813 0.160354 0.160354 0.103605 -0.0477275 -0.00516539 0.169813 -0.142311 0.165084 0.160355 -0.130487 -0.243986 -0.0335404 0.0184806 -0.251079 0.165084 -0.151768 0.169813 0.0255746 0.0303037 0.0350326 0.00192851 -0.106841 0.155625 -0.402411 0.165084 -0.125758 0.0350328 0.0397618 -0.385859 0.0161164 -0.156497 0.160354 -0.0154285 0.15815 -0.0021233 -0.0021233 0.147809 -0.0124635 0.0185574 0.15815 0.0366527 0.16849 0.0159726 -0.0951843 0.16849 0.16849 -0.0072934 -0.15464 -0.273552 -0.00470819 -0.121034 -0.172736 -0.113279 0.0288977 0.0030468 -0.0021225 -0.170151 0.0935237 0.054748 0.054748 0.054748 0.054748 0.054748 -0.400219 -0.0202177 -0.102939 -0.0021233 0.0082177 -0.15981 -0.146884 0.152979 0.15815 -0.149471 -0.167566 0.0237276 -0.0150484 0.15815 0.16849 0.15815 0.152979 -0.118449 -0.0202184 0.0418228 0.152979 0.0288977 -0.242531 0.0237276 0.17366 0.16332 -0.121034 -0.0124635 0.15815 0.15815 0.15815 0.0185575 0.142639 0.15815 0.15815 0.0263125 -0.0925992 0.16849 0.16332 0.152979 0.17366 0.15815 -0.00987849 0.16849 -0.0124636 -0.0124636 -0.146885 -0.13396 0.0288977 -0.115864 -0.314913 -0.0253886 0.0237276 0.0366527 0.16849 0.16332 0.16849 0.15815 0.16332\n] bx/bbi/bigwig_tests.py::TestBigWig::test_summary_from_file[chr1 10000 12000 1000 mean n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a n/a 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0178189 -0.0152047 -0.0152047 0.0178189 0.0508425 0.0508425 0.0508425 -1.02793 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.23708 0.0508425 0.0508425 0.0178189 0.0508425 0.0508425 -1.02793 -1.01692 0.0508425 0.0508425 -1.23708 -1.20405 0.0508425 -1.20405 0.0508425 0.0508425 0.0178189 -1.20405 0.0508425 0.0508425 -1.02793 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.16002 0.0508425 0.0178189 0.0508425 -1.01692 0.0508425 -1.19305 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.18204 0.0508425 -1.20405 -1.20405 0.0508425 0.0508425 0.0178189 -0.0152047 -0.0152047 -1.16002 0.0508425 -1.20405 -1.19305 0.0508425 -1.20405 0.0508425 0.0508425 0.0508425 -1.14901 0.0508425 0.0508425 0.0508425 0.0508425 -1.19305 0.0508425 0.0508425 0.0508425 -1.02793 0.0508425 -1.01692 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.02793 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.18204 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.20405 -1.14901 0.0508425 0.0508425 0.0508425 0.0508425 -1.01692 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.16002 0.0508425 0.0508425 -1.20405 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.02793 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.14901 -2.34887 -1.14901 0.0508425 0.0508425 0.0508425 -1.20405 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 -0.0152047 0.0508425 0.0508425 0.0508425 0.0508425 -1.14901 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.02793 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.237976 0.237976 0.237976 0.204953 -0.76374 0.237976 0.271 0.204953 0.204953 0.204953 0.237976 0.271 -0.334433 0.237976 0.237976 0.271 -0.719708 0.204953 0.204953 -0.609628 0.237976 -1.23708 0.0508425 -0.411488 0.204953 0.204953 0.204953 0.237976 0.204953 0.204953 0.204953 0.204953 0.237976 -1.00591 0.237976 0.237976 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 -1.01692 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0508425 0.0838662 0.094874 0.105882 0.105882 0.105882 0.105882 0.094874 0.105882 0.105882 0.094874 0.105882 0.094874 0.094874 0.11689 0.094874 0.094874 0.094874 0.11689 -0.895835 -0.697693 0.105882 0.094874 0.105882 0.11689 0.105882 0.094874 -0.697695 0.11689 0.105882 0.105882 0.105882 0.094874 0.105882 -0.906843 0.094874 0.105882 0.105882 -0.730718 0.094874 0.11689 0.11689 0.0728583 -0.80777 0.11689 0.105882 0.11689 0.11689 0.094874 0.105882 0.105882 0.094874 0.094874 0.094874 0.094874 0.094874 0.094874 0.094874 0.11689 0.105882 0.105882 0.094874 0.105882 0.094874 0.094874 0.11689 0.105882 0.105882 0.105882 0.11689 -0.686685 -0.884825 0.105882 0.105882 0.105882 0.094874 -0.71971 0.105882 0.105882 -0.91785 0.105882 0.094874 0.094874 0.105882 0.11689 0.11689 0.094874 0.094874 0.11689 0.094874 0.105882 0.105882 0.105882 0.105882 0.105882 0.11689 -0.730718 0.105882 -1.02793 0.094874 0.094874 0.094874 0.11689 -0.873818 0.094874 -0.71971 0.11689 0.105882 0.105882 0.11689 0.11689 0.105882 0.094874 -0.80777 0.094874 0.105882 0.11689 0.094874 0.094874 0.094874 0.105882 0.094874 -0.928858 0.0838661 0.0728583 0.0948741 0.094874 0.11689 0.11689 0.105882 0.105882 -0.697695 0.094874 0.094874 0.105882 0.094874 0.105882 0.11689 -0.829788 0.094874 0.105882 -0.906843 0.105882 0.105882 0.105882 0.094874 0.105882 0.105882 0.094874 0.094874 0.11689 0.105882 0.105882 -0.829788 0.094874 0.105882 0.11689 -0.71971 0.105882 0.103756 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 -0.835144 0.090622 0.090622 -0.901269 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 0.090622 -0.818609 0.090622 0.090622 0.090622\n] /build/reproducible-path/python-bx-0.13.0/.pybuild/cpython3_3.13_bx-python/build/bx/bbi/bigwig_tests.py:109: RuntimeWarning: invalid value encountered in divide assert allclose(sd.sum_data / sd.valid_count, values) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ======================= 139 passed, 6 warnings in 4.02s ======================== create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-bx/ -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/python-bx-0.13.0' dh_python3 --shebang=/usr/bin/python3 I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/aggregate_scores_in_intervals.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/align_print_template.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/axt_extract_ranges.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/axt_to_fasta.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/axt_to_lav.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/axt_to_maf.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_bigwig_profile.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_build_windows.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_complement.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_count_by_interval.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_count_overlapping.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_coverage.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_coverage_by_interval.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_diff_basewise_summary.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_extend_to.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_intersect.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_intersect_basewise.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_merge_overlapping.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_rand_intersect.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bed_subtract_basewise.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/bnMapper.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/div_snp_table_chr.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/find_in_sorted_file.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/gene_fourfold_sites.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/get_scores_in_intervals.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/int_seqs_to_char_strings.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/interval_count_intersections.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/interval_join.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/lav_to_axt.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/lav_to_maf.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/line_select.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/lzop_build_offset_table.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/mMK_bitset.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_build_index.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_chop.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_chunk.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_col_counts.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_col_counts_all.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_count.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_covered_ranges.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_covered_regions.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_div_sites.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_drop_overlapping.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_extract_chrom_ranges.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_extract_ranges.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_extract_ranges_indexed.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_filter.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_filter_max_wc.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_gap_frequency.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_gc_content.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_interval_alignibility.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_limit_to_species.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_mapping_word_frequency.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_mask_cpg.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_mean_length_ungapped_piece.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_percent_columns_matching.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_percent_identity.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_print_chroms.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_print_scores.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_randomize.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_region_coverage_by_src.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_select.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_shuffle_columns.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_species_in_all_files.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_split_by_src.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_thread_for_species.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_tile.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_tile_2.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_tile_2bit.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_to_axt.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_to_concat_fasta.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_to_fasta.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_to_int_seqs.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_translate_chars.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_truncate.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/maf_word_frequency.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/mask_quality.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/nib_chrom_intervals_to_fasta.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/nib_intervals_to_fasta.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/nib_length.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/one_field_per_line.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/out_to_chain.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/prefix_lines.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/pretty_table.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/qv_to_bqv.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/random_lines.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/table_add_column.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/table_filter.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/tfloc_summary.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/ucsc_gene_table_to_intervals.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/wiggle_to_array_tree.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/wiggle_to_binned_array.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/wiggle_to_chr_binned_array.py I: dh_python3 tools:114: replacing shebang in debian/python3-bx/usr/bin/wiggle_to_simple.py dh_numpy3 make[1]: Leaving directory '/build/reproducible-path/python-bx-0.13.0' dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-bx' in '../python3-bx_0.13.0-2_arm64.deb'. dpkg-deb: building package 'python3-bx-dbgsym' in '../python3-bx-dbgsym_0.13.0-2_arm64.deb'. dpkg-genbuildinfo --build=binary -O../python-bx_0.13.0-2_arm64.buildinfo dpkg-genchanges --build=binary -O../python-bx_0.13.0-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1123429 and its subdirectories I: Current time: Sat Oct 11 13:10:12 -12 2025 I: pbuilder-time-stamp: 1760231412 Sun Oct 12 01:10:14 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Sun Oct 12 01:10:14 UTC 2025 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Sun Oct 12 01:13:54 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Sun Oct 12 01:13:54 UTC 2025 I: python-bx_0.13.0-2_arm64.changes: Format: 1.8 Date: Mon, 06 Oct 2025 16:40:00 +0200 Source: python-bx Binary: python3-bx python3-bx-dbgsym Architecture: arm64 Version: 0.13.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Santiago Vila Description: python3-bx - library to manage genomic data and its alignment Closes: 1116850 Changes: python-bx (0.13.0-2) unstable; urgency=medium . * Team upload. * Drop from python3-numpy in BD. Closes: #1116850. * d/control: Add build-dependency on python3-numpy-dev (lintian error). * d/control: Drop "Rules-Requires-Root: no", it's the default. * d/control: Drop "Priority: optional", it's the default. * d/control: Update standards-version. Checksums-Sha1: 2d24a2441ddfbf8c088869a15cf05ad993c1bda3 6610 python-bx_0.13.0-2_arm64.buildinfo 17b006b704035da0954af8385aa02a6a3ee7d556 3702844 python3-bx-dbgsym_0.13.0-2_arm64.deb baa85736702bc649f2c2956aea7827c6a1c7f59c 641040 python3-bx_0.13.0-2_arm64.deb Checksums-Sha256: c277544004a1058c38a0c0f9ca5258709158c2b34a273cf5d682c616e58cbb05 6610 python-bx_0.13.0-2_arm64.buildinfo a317ccf9634f205e55a21caa2c4c01d0e3553a96229e1e8fe233c7c870154fb0 3702844 python3-bx-dbgsym_0.13.0-2_arm64.deb 7d6905675d31d32cb90086aa080714bb9a445b416811b679d501b17a772f4220 641040 python3-bx_0.13.0-2_arm64.deb Files: 0feecefec8734aea7c71783ef987d583 6610 python optional python-bx_0.13.0-2_arm64.buildinfo 0e0e6f7bf90933fd0b46763b1c4d8ef7 3702844 debug optional python3-bx-dbgsym_0.13.0-2_arm64.deb df94cb597b950c31db5aba909df0e822 641040 python optional python3-bx_0.13.0-2_arm64.deb Sun Oct 12 01:13:55 UTC 2025 I: diffoscope 306 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_12-125098.service; invocation ID: 7cb2d05305584cb191624dc442404b79 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.gfWteM5x/python-bx_0.13.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.gfWteM5x/python-bx_0.13.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.gfWteM5x/python-bx_0.13.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.gfWteM5x/b1/python-bx_0.13.0-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.gfWteM5x/b2/python-bx_0.13.0-2_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 207ms CPU time consumed: 169ms Memory peak: 18M (swap: 0B) Sun Oct 12 01:13:55 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Sun Oct 12 01:13:55 UTC 2025 I: python-bx from unstable built successfully and reproducibly on arm64. Sun Oct 12 01:13:56 UTC 2025 I: Removing signed python-bx_0.13.0-2_arm64.buildinfo.asc files: removed './b1/python-bx_0.13.0-2_arm64.buildinfo.asc' removed './b2/python-bx_0.13.0-2_arm64.buildinfo.asc'