Fri Dec 13 19:32:51 UTC 2024 I: starting to build obitools/unstable/arm64 on jenkins on '2024-12-13 19:32' Fri Dec 13 19:32:51 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_5/73888/console.log Fri Dec 13 19:32:51 UTC 2024 I: Downloading source for unstable/obitools=3.0.1~b26+dfsg-3 --2024-12-13 19:32:52-- http://deb.debian.org/debian/pool/main/o/obitools/obitools_3.0.1%7eb26%2bdfsg-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2210 (2.2K) [text/prs.lines.tag] Saving to: ‘obitools_3.0.1~b26+dfsg-3.dsc’ 0K .. 100% 289M=0s 2024-12-13 19:32:52 (289 MB/s) - ‘obitools_3.0.1~b26+dfsg-3.dsc’ saved [2210/2210] Fri Dec 13 19:32:52 UTC 2024 I: obitools_3.0.1~b26+dfsg-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: obitools Binary: obitools Architecture: any Version: 3.0.1~b26+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou , Andreas Tille Homepage: https://metabarcoding.org/obitools3 Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/obitools Vcs-Git: https://salsa.debian.org/med-team/obitools.git Testsuite: autopkgtest, autopkgtest-pkg-python Testsuite-Triggers: less Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-dev:native, libpython3-dev, python3-setuptools, cython3, cmake Package-List: obitools deb science optional arch=any Checksums-Sha1: 79040b3e48957ae1669e2b094fb3fc56a8d0db7b 255092 obitools_3.0.1~b26+dfsg.orig.tar.xz 880f7d3e5ed3a90e154997172fe470728ad2057d 3556832 obitools_3.0.1~b26+dfsg-3.debian.tar.xz Checksums-Sha256: 6f067e22b76e4489288f7a3d13027391ecba5719de324c2ca58ec4542bc60e91 255092 obitools_3.0.1~b26+dfsg.orig.tar.xz 0b79fc02688c6b6bc60ac9d8e5415f91fdf750ae4b1c5a0b6fd2b00bb5218ca5 3556832 obitools_3.0.1~b26+dfsg-3.debian.tar.xz Files: 974e65eaa6d1a2f51a7f5594b6987349 255092 obitools_3.0.1~b26+dfsg.orig.tar.xz 3036039d013d939b2e214e8912c188c1 3556832 obitools_3.0.1~b26+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmc/VXASHGNydXNvZUBk ZWJpYW4ub3JnAAoJEDwmdj9sZ+bi42EP/2QKQ98tQuiecGBFQt9elCmKAEVThZ5D yJ7sWoKMg+5zozDEJdYwt9P7rrht1ziSBD/rX+s9ukDuk2PulRfHD0k/x2PvRzA5 IHe6J/34yGwiEzxK2vBdnWNzCVQpeGS3Cs83/UAK0pnkIr6l17/k4TS04CjHYKfB XXWW05LV2UFH13EqZuRWN4mKgOhLYhUOSoBdLDqBDuV+0KnTL4eWbVxGUAY/Y7pd XfJ02xy8Dz3oJMnmU4tYH3M0Lf6GX9EYxrQcQCNc1twE6T5vOZ2/WLuMh78J67V7 S07nBIFf2LZ34DQLLxnhPARElzro/3XTphqNwra/1SqZ3ROeTh6IuigofJUEyE6d R7wwjV5/j1QvAXPlu2tAuZ8vRPpj7Y+3o5Uz4HTe5G4ixzYtVFQ57mYdxO2v+OEu v4MvX1RusNab/+WRhiUMd9lFBEkZeK1mzNcteizsQDUAbvYuQ8dovPzHrSeozinB fxx8EeU2jlkjGblsrED9qd7ypMity65hiWFjT0zmIymGNVKmg5u8eUFyrGrw82cX lmGBwKzHgUX44lCOEV7Dv1bR3pfYnAe/QAEE6NVJiJ6QoSMNsQPq86i8+ke+qNYl hd38rYvPOBBEEly0RVqRaa2RecnCw5qFvgK9weNH82zusheUgqRwoLCxeAcVPoyS zrfSmG4kgCSV =vPIl -----END PGP SIGNATURE----- Fri Dec 13 19:32:52 UTC 2024 I: Checking whether the package is not for us Fri Dec 13 19:32:52 UTC 2024 I: Starting 1st build on remote node codethink03-arm64.debian.net. Fri Dec 13 19:32:52 UTC 2024 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Fri Dec 13 19:45:06 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jan 15 13:55:54 -12 2026 I: pbuilder-time-stamp: 1768528554 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [obitools_3.0.1~b26+dfsg-3.dsc] I: copying [./obitools_3.0.1~b26+dfsg.orig.tar.xz] I: copying [./obitools_3.0.1~b26+dfsg-3.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Nov 21 15:44:48 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: issuer "crusoe@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./obitools_3.0.1~b26+dfsg-3.dsc: no acceptable signature found dpkg-source: info: extracting obitools in obitools-3.0.1~b26+dfsg dpkg-source: info: unpacking obitools_3.0.1~b26+dfsg.orig.tar.xz dpkg-source: info: unpacking obitools_3.0.1~b26+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying cmake_debian_options dpkg-source: info: applying no_cython_in_binary_package.patch dpkg-source: info: applying any_arch dpkg-source: info: applying no-rpath dpkg-source: info: applying python3.12 I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1848517/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='84f30b54a6b543f18cd6f36a8162d63f' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1848517' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4VNsIeEs/pbuilderrc_g2hZ --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4VNsIeEs/b1 --logfile b1/build.log obitools_3.0.1~b26+dfsg-3.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1848517/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-dev:native, libpython3-dev, python3-setuptools, cython3, cmake dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20082 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-dev:native. pbuilder-satisfydepends-dummy depends on libpython3-dev; however: Package libpython3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} procps{a} python3{a} python3-autocommand{a} python3-dev{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 91 newly installed, 0 to remove and 0 not upgraded. Need to get 54.1 MB of archives. After unpacking 229 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.8-2 [809 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.8-2 [1940 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024b-4 [256 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2~rc1-2 [23.7 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 12 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-5 [159 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.8-2 [1906 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.8-2 [677 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.12.7-1 [9708 B] Get: 22 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-6 [1130 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-12 [91.4 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 cmake-data all 3.31.2-1 [2267 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.7.4-1.1 [323 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.1-1 [325 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-3 [72.9 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.5-1 [129 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.48.0-7 [143 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 cmake arm64 3.31.2-1 [9879 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 cython3 arm64 3.0.11+dfsg-1+b1 [2726 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 64 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 76 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 75.2.0-1 [731 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20241024 [109 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.6.4-1 [143 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 8.1.3-2 [30.3 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 libpython3.12t64 arm64 3.12.8-2 [1983 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 libpython3.12-dev arm64 3.12.8-2 [4825 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 libpython3-dev arm64 3.12.7-1 [9980 B] Get: 90 http://deb.debian.org/debian unstable/main arm64 python3.12-dev arm64 3.12.8-2 [505 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 python3-dev arm64 3.12.7-1 [26.1 kB] Fetched 54.1 MB in 1s (106 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20082 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.8-2_arm64.deb ... Unpacking libpython3.12-minimal:arm64 (3.12.8-2) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.6.4-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.8-2_arm64.deb ... Unpacking python3.12-minimal (3.12.8-2) ... Setting up libpython3.12-minimal:arm64 (3.12.8-2) ... Setting up libexpat1:arm64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.8-2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20402 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_arm64.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-4_all.deb ... Unpacking tzdata (2024b-4) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../05-libcom-err2_1.47.2~rc1-2_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.2~rc1-2) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-3) ... 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Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:arm64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_arm64.deb ... Unpacking libnsl2:arm64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../14-libreadline8t64_8.2-5_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:arm64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.8-2_arm64.deb ... Unpacking libpython3.12-stdlib:arm64 (3.12.8-2) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.8-2_arm64.deb ... Unpacking python3.12 (3.12.8-2) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21465 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.7-1_arm64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../01-libproc2-0_2%3a4.0.4-6_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../02-procps_2%3a4.0.4-6_arm64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../03-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../04-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../05-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../06-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. 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Setting up dh-python (6.20241024) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/obitools-3.0.1~b26+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../obitools_3.0.1~b26+dfsg-3_source.changes dpkg-buildpackage: info: source package obitools dpkg-buildpackage: info: source version 3.0.1~b26+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. 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Update the VERSION argument value. 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-S"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -B"/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject" --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject/CMakeFiles" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject//CMakeFiles/progress.marks" make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' make -f CMakeFiles/cobitools3.dir/build.make CMakeFiles/cobitools3.dir/depend make[3]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' cd "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject/CMakeFiles/cobitools3.dir/DependInfo.cmake" "--color=" make[3]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' make -f CMakeFiles/cobitools3.dir/build.make CMakeFiles/cobitools3.dir/build make[3]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' [ 1%] Building C object CMakeFiles/cobitools3.dir/obisig.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obisig.c.o -MF CMakeFiles/cobitools3.dir/obisig.c.o.d -o CMakeFiles/cobitools3.dir/obisig.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obisig.c" [ 3%] Building C object CMakeFiles/cobitools3.dir/obierrno.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obierrno.c.o -MF CMakeFiles/cobitools3.dir/obierrno.c.o.d -o CMakeFiles/cobitools3.dir/obierrno.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obierrno.c" [ 5%] Building C object CMakeFiles/cobitools3.dir/obidms_taxonomy.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidms_taxonomy.c.o -MF CMakeFiles/cobitools3.dir/obidms_taxonomy.c.o.d -o CMakeFiles/cobitools3.dir/obidms_taxonomy.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidms_taxonomy.c" [ 7%] Building C object CMakeFiles/cobitools3.dir/obiblob_indexer.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obiblob_indexer.c.o -MF CMakeFiles/cobitools3.dir/obiblob_indexer.c.o.d -o CMakeFiles/cobitools3.dir/obiblob_indexer.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obiblob_indexer.c" [ 9%] Building C object CMakeFiles/cobitools3.dir/obi_lcs.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obi_lcs.c.o -MF CMakeFiles/cobitools3.dir/obi_lcs.c.o.d -o CMakeFiles/cobitools3.dir/obi_lcs.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obi_lcs.c" [ 11%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_str.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_str.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_str.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_str.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_str.c" [ 13%] Building C object CMakeFiles/cobitools3.dir/bloom.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/bloom.c.o -MF CMakeFiles/cobitools3.dir/bloom.c.o.d -o CMakeFiles/cobitools3.dir/bloom.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/bloom.c" [ 15%] Building C object CMakeFiles/cobitools3.dir/build_reference_db.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/build_reference_db.c.o -MF CMakeFiles/cobitools3.dir/build_reference_db.c.o.d -o CMakeFiles/cobitools3.dir/build_reference_db.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/build_reference_db.c" [ 17%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_array.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_array.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_array.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_array.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_array.c" [ 19%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_idx.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_idx.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_idx.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_idx.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_idx.c" [ 21%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_bool.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_bool.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_bool.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_bool.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_bool.c" [ 23%] Building C object CMakeFiles/cobitools3.dir/libjson/json_utils.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libjson/json_utils.c.o -MF CMakeFiles/cobitools3.dir/libjson/json_utils.c.o.d -o CMakeFiles/cobitools3.dir/libjson/json_utils.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libjson/json_utils.c" [ 25%] Building C object CMakeFiles/cobitools3.dir/libjson/cJSON.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libjson/cJSON.c.o -MF CMakeFiles/cobitools3.dir/libjson/cJSON.c.o.d -o CMakeFiles/cobitools3.dir/libjson/cJSON.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libjson/cJSON.c" [ 26%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_blob.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_blob.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_blob.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_blob.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_blob.c" [ 28%] Building C object CMakeFiles/cobitools3.dir/dna_seq_indexer.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/dna_seq_indexer.c.o -MF CMakeFiles/cobitools3.dir/dna_seq_indexer.c.o.d -o CMakeFiles/cobitools3.dir/dna_seq_indexer.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/dna_seq_indexer.c" [ 30%] Building C object CMakeFiles/cobitools3.dir/obi_ecotag.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obi_ecotag.c.o -MF CMakeFiles/cobitools3.dir/obi_ecotag.c.o.d -o CMakeFiles/cobitools3.dir/obi_ecotag.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obi_ecotag.c" [ 32%] Building C object CMakeFiles/cobitools3.dir/encode.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/encode.c.o -MF CMakeFiles/cobitools3.dir/encode.c.o.d -o CMakeFiles/cobitools3.dir/encode.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/encode.c" [ 34%] Building C object CMakeFiles/cobitools3.dir/obiavl.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obiavl.c.o -MF CMakeFiles/cobitools3.dir/obiavl.c.o.d -o CMakeFiles/cobitools3.dir/obiavl.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obiavl.c" [ 36%] Building C object CMakeFiles/cobitools3.dir/sse_banded_LCS_alignment.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/sse_banded_LCS_alignment.c.o -MF CMakeFiles/cobitools3.dir/sse_banded_LCS_alignment.c.o.d -o CMakeFiles/cobitools3.dir/sse_banded_LCS_alignment.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/sse_banded_LCS_alignment.c" [ 38%] Building C object CMakeFiles/cobitools3.dir/kmer_similarity.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/kmer_similarity.c.o -MF CMakeFiles/cobitools3.dir/kmer_similarity.c.o.d -o CMakeFiles/cobitools3.dir/kmer_similarity.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/kmer_similarity.c" [ 40%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_qual.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_qual.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_qual.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_qual.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_qual.c" [ 42%] Building C object CMakeFiles/cobitools3.dir/obi_clean.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obi_clean.c.o -MF CMakeFiles/cobitools3.dir/obi_clean.c.o.d -o CMakeFiles/cobitools3.dir/obi_clean.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obi_clean.c" [ 44%] Building C object CMakeFiles/cobitools3.dir/utils.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/utils.c.o -MF CMakeFiles/cobitools3.dir/utils.c.o.d -o CMakeFiles/cobitools3.dir/utils.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/utils.c" [ 46%] Building C object CMakeFiles/cobitools3.dir/uint8_indexer.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/uint8_indexer.c.o -MF CMakeFiles/cobitools3.dir/uint8_indexer.c.o.d -o CMakeFiles/cobitools3.dir/uint8_indexer.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/uint8_indexer.c" [ 48%] Building C object CMakeFiles/cobitools3.dir/murmurhash2.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/murmurhash2.c.o -MF CMakeFiles/cobitools3.dir/murmurhash2.c.o.d -o CMakeFiles/cobitools3.dir/murmurhash2.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/murmurhash2.c" [ 50%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_char.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_char.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_char.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_char.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_char.c" [ 51%] Building C object CMakeFiles/cobitools3.dir/obiview.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obiview.c.o -MF CMakeFiles/cobitools3.dir/obiview.c.o.d -o CMakeFiles/cobitools3.dir/obiview.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obiview.c" [ 53%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_int.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_int.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_int.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_int.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_int.c" [ 55%] Building C object CMakeFiles/cobitools3.dir/linked_list.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/linked_list.c.o -MF CMakeFiles/cobitools3.dir/linked_list.c.o.d -o CMakeFiles/cobitools3.dir/linked_list.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/linked_list.c" [ 57%] Building C object CMakeFiles/cobitools3.dir/obiblob.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obiblob.c.o -MF CMakeFiles/cobitools3.dir/obiblob.c.o.d -o CMakeFiles/cobitools3.dir/obiblob.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obiblob.c" [ 59%] Building C object CMakeFiles/cobitools3.dir/hashtable.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/hashtable.c.o -MF CMakeFiles/cobitools3.dir/hashtable.c.o.d -o CMakeFiles/cobitools3.dir/hashtable.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/hashtable.c" [ 61%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn.c" [ 63%] Building C object CMakeFiles/cobitools3.dir/char_str_indexer.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/char_str_indexer.c.o -MF CMakeFiles/cobitools3.dir/char_str_indexer.c.o.d -o CMakeFiles/cobitools3.dir/char_str_indexer.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/char_str_indexer.c" [ 65%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_float.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_float.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_float.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_float.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_float.c" [ 67%] Building C object CMakeFiles/cobitools3.dir/upperband.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/upperband.c.o -MF CMakeFiles/cobitools3.dir/upperband.c.o.d -o CMakeFiles/cobitools3.dir/upperband.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/upperband.c" [ 69%] Building C object CMakeFiles/cobitools3.dir/crc64.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/crc64.c.o -MF CMakeFiles/cobitools3.dir/crc64.c.o.d -o CMakeFiles/cobitools3.dir/crc64.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/crc64.c" [ 71%] Building C object CMakeFiles/cobitools3.dir/obidmscolumn_seq.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumn_seq.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumn_seq.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumn_seq.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumn_seq.c" [ 73%] Building C object CMakeFiles/cobitools3.dir/obilittlebigman.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obilittlebigman.c.o -MF CMakeFiles/cobitools3.dir/obilittlebigman.c.o.d -o CMakeFiles/cobitools3.dir/obilittlebigman.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obilittlebigman.c" [ 75%] Building C object CMakeFiles/cobitools3.dir/obidmscolumndir.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidmscolumndir.c.o -MF CMakeFiles/cobitools3.dir/obidmscolumndir.c.o.d -o CMakeFiles/cobitools3.dir/obidmscolumndir.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidmscolumndir.c" [ 76%] Building C object CMakeFiles/cobitools3.dir/obidms.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obidms.c.o -MF CMakeFiles/cobitools3.dir/obidms.c.o.d -o CMakeFiles/cobitools3.dir/obidms.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obidms.c" [ 78%] Building C object CMakeFiles/cobitools3.dir/obi_ecopcr.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obi_ecopcr.c.o -MF CMakeFiles/cobitools3.dir/obi_ecopcr.c.o.d -o CMakeFiles/cobitools3.dir/obi_ecopcr.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obi_ecopcr.c" [ 80%] Building C object CMakeFiles/cobitools3.dir/libecoPCR/libthermo/nnparams.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libecoPCR/libthermo/nnparams.c.o -MF CMakeFiles/cobitools3.dir/libecoPCR/libthermo/nnparams.c.o.d -o CMakeFiles/cobitools3.dir/libecoPCR/libthermo/nnparams.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libecoPCR/libthermo/nnparams.c" [ 82%] Building C object CMakeFiles/cobitools3.dir/libecoPCR/ecoapat.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libecoPCR/ecoapat.c.o -MF CMakeFiles/cobitools3.dir/libecoPCR/ecoapat.c.o.d -o CMakeFiles/cobitools3.dir/libecoPCR/ecoapat.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libecoPCR/ecoapat.c" [ 84%] Building C object CMakeFiles/cobitools3.dir/libecoPCR/libapat/libstki.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libecoPCR/libapat/libstki.c.o -MF CMakeFiles/cobitools3.dir/libecoPCR/libapat/libstki.c.o.d -o CMakeFiles/cobitools3.dir/libecoPCR/libapat/libstki.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libecoPCR/libapat/libstki.c" [ 86%] Building C object CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_search.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_search.c.o -MF CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_search.c.o.d -o CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_search.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libecoPCR/libapat/apat_search.c" [ 88%] Building C object CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_parse.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_parse.c.o -MF CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_parse.c.o.d -o CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_parse.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libecoPCR/libapat/apat_parse.c" [ 90%] Building C object CMakeFiles/cobitools3.dir/libecoPCR/ecodna.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libecoPCR/ecodna.c.o -MF CMakeFiles/cobitools3.dir/libecoPCR/ecodna.c.o.d -o CMakeFiles/cobitools3.dir/libecoPCR/ecodna.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libecoPCR/ecodna.c" [ 92%] Building C object CMakeFiles/cobitools3.dir/libecoPCR/ecoMalloc.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libecoPCR/ecoMalloc.c.o -MF CMakeFiles/cobitools3.dir/libecoPCR/ecoMalloc.c.o.d -o CMakeFiles/cobitools3.dir/libecoPCR/ecoMalloc.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libecoPCR/ecoMalloc.c" [ 94%] Building C object CMakeFiles/cobitools3.dir/libecoPCR/ecoError.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/libecoPCR/ecoError.c.o -MF CMakeFiles/cobitools3.dir/libecoPCR/ecoError.c.o.d -o CMakeFiles/cobitools3.dir/libecoPCR/ecoError.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/libecoPCR/ecoError.c" [ 96%] Building C object CMakeFiles/cobitools3.dir/obitypes.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/obitypes.c.o -MF CMakeFiles/cobitools3.dir/obitypes.c.o.d -o CMakeFiles/cobitools3.dir/obitypes.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/obitypes.c" [ 98%] Building C object CMakeFiles/cobitools3.dir/array_indexer.c.o /usr/bin/cc -Dcobitools3_EXPORTS -I"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -fPIC -fopenmp -MD -MT CMakeFiles/cobitools3.dir/array_indexer.c.o -MF CMakeFiles/cobitools3.dir/array_indexer.c.o.d -o CMakeFiles/cobitools3.dir/array_indexer.c.o -c "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src/array_indexer.c" [100%] Linking C shared library libcobitools3.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cobitools3.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -O3 -w -I "src" -I "src/libecoPCR" -I "src/libjson" -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/cobitools3.dir/link.d -Wl,-z,relro -shared -Wl,-soname,libcobitools3.so -o libcobitools3.so CMakeFiles/cobitools3.dir/obisig.c.o CMakeFiles/cobitools3.dir/obierrno.c.o CMakeFiles/cobitools3.dir/obidms_taxonomy.c.o CMakeFiles/cobitools3.dir/obiblob_indexer.c.o CMakeFiles/cobitools3.dir/obi_lcs.c.o CMakeFiles/cobitools3.dir/obidmscolumn_str.c.o CMakeFiles/cobitools3.dir/bloom.c.o CMakeFiles/cobitools3.dir/build_reference_db.c.o CMakeFiles/cobitools3.dir/obidmscolumn_array.c.o CMakeFiles/cobitools3.dir/obidmscolumn_idx.c.o CMakeFiles/cobitools3.dir/obidmscolumn_bool.c.o CMakeFiles/cobitools3.dir/libjson/json_utils.c.o CMakeFiles/cobitools3.dir/libjson/cJSON.c.o CMakeFiles/cobitools3.dir/obidmscolumn_blob.c.o CMakeFiles/cobitools3.dir/dna_seq_indexer.c.o CMakeFiles/cobitools3.dir/obi_ecotag.c.o CMakeFiles/cobitools3.dir/encode.c.o CMakeFiles/cobitools3.dir/obiavl.c.o CMakeFiles/cobitools3.dir/sse_banded_LCS_alignment.c.o CMakeFiles/cobitools3.dir/kmer_similarity.c.o CMakeFiles/cobitools3.dir/obidmscolumn_qual.c.o CMakeFiles/cobitools3.dir/obi_clean.c.o CMakeFiles/cobitools3.dir/utils.c.o CMakeFiles/cobitools3.dir/uint8_indexer.c.o CMakeFiles/cobitools3.dir/murmurhash2.c.o CMakeFiles/cobitools3.dir/obidmscolumn_char.c.o CMakeFiles/cobitools3.dir/obiview.c.o CMakeFiles/cobitools3.dir/obidmscolumn_int.c.o CMakeFiles/cobitools3.dir/linked_list.c.o CMakeFiles/cobitools3.dir/obiblob.c.o CMakeFiles/cobitools3.dir/hashtable.c.o CMakeFiles/cobitools3.dir/obidmscolumn.c.o CMakeFiles/cobitools3.dir/char_str_indexer.c.o CMakeFiles/cobitools3.dir/obidmscolumn_float.c.o CMakeFiles/cobitools3.dir/upperband.c.o CMakeFiles/cobitools3.dir/crc64.c.o CMakeFiles/cobitools3.dir/obidmscolumn_seq.c.o CMakeFiles/cobitools3.dir/obilittlebigman.c.o CMakeFiles/cobitools3.dir/obidmscolumndir.c.o CMakeFiles/cobitools3.dir/obidms.c.o CMakeFiles/cobitools3.dir/obi_ecopcr.c.o CMakeFiles/cobitools3.dir/libecoPCR/libthermo/nnparams.c.o CMakeFiles/cobitools3.dir/libecoPCR/ecoapat.c.o CMakeFiles/cobitools3.dir/libecoPCR/libapat/libstki.c.o CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_search.c.o CMakeFiles/cobitools3.dir/libecoPCR/libapat/apat_parse.c.o CMakeFiles/cobitools3.dir/libecoPCR/ecodna.c.o CMakeFiles/cobitools3.dir/libecoPCR/ecoMalloc.c.o CMakeFiles/cobitools3.dir/libecoPCR/ecoError.c.o CMakeFiles/cobitools3.dir/obitypes.c.o CMakeFiles/cobitools3.dir/array_indexer.c.o /usr/lib/gcc/aarch64-linux-gnu/14/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' [100%] Built target cobitools3 make[2]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' /usr/bin/cmake -E cmake_progress_start "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject/CMakeFiles" 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /build/reproducible-path/obitools-3.0.1~b26+dfsg/libcobitools3.so make[1]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' running build_py creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3 copying python/obitools3/version.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3 copying python/obitools3/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3 creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/writers copying python/obitools3/writers/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/writers creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/uri copying python/obitools3/uri/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/uri creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers copying python/obitools3/parsers/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign copying python/obitools3/libalign/solexapairend.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign copying python/obitools3/libalign/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format copying python/obitools3/format/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/files copying python/obitools3/files/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/files creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms copying python/obitools3/dms/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view copying python/obitools3/dms/view/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view/typed_view copying python/obitools3/dms/view/typed_view/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view/typed_view creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/taxo copying python/obitools3/dms/taxo/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/taxo creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column copying python/obitools3/dms/column/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column copying python/obitools3/dms/column/typed_column/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/capi copying python/obitools3/dms/capi/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/capi creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands copying python/obitools3/commands/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps copying python/obitools3/apps/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/optiongroups copying python/obitools3/apps/optiongroups/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/optiongroups running build_ext building 'obitools3.utils' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3 aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/utils.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/utils.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/utils.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/utils.cpython-312-aarch64-linux-gnu.so building 'obitools3.writers.tab' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/writers aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/writers/tab.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/writers/tab.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/writers/tab.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/writers/tab.cpython-312-aarch64-linux-gnu.so building 'obitools3.writers.fastq' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/writers/fastq.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/writers/fastq.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/writers/fastq.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/writers/fastq.cpython-312-aarch64-linux-gnu.so building 'obitools3.writers.fasta' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/writers/fasta.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/writers/fasta.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/writers/fasta.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/writers/fasta.cpython-312-aarch64-linux-gnu.so building 'obitools3.uri.decode' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/uri aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/uri/decode.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/uri/decode.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/uri/decode.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/uri/decode.cpython-312-aarch64-linux-gnu.so building 'obitools3.parsers.universal' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/parsers/universal.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/universal.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/universal.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/universal.cpython-312-aarch64-linux-gnu.so building 'obitools3.parsers.tab' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/parsers/tab.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/tab.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/tab.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/tab.cpython-312-aarch64-linux-gnu.so building 'obitools3.parsers.ngsfilter' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/parsers/ngsfilter.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/ngsfilter.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/ngsfilter.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/ngsfilter.cpython-312-aarch64-linux-gnu.so building 'obitools3.parsers.header' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/parsers/header.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/header.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/header.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/header.cpython-312-aarch64-linux-gnu.so building 'obitools3.parsers.genbank' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/parsers/genbank.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/genbank.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/genbank.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/genbank.cpython-312-aarch64-linux-gnu.so building 'obitools3.parsers.fastq' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/parsers/fastq.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/fastq.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/fastq.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/fastq.cpython-312-aarch64-linux-gnu.so building 'obitools3.parsers.fasta' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/parsers/fasta.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/fasta.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/fasta.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/fasta.cpython-312-aarch64-linux-gnu.so building 'obitools3.parsers.embl_genbank_features' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/parsers/embl_genbank_features.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/embl_genbank_features.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/embl_genbank_features.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/embl_genbank_features.cpython-312-aarch64-linux-gnu.so building 'obitools3.parsers.embl' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/parsers/embl.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/embl.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/parsers/embl.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/embl.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign.shifted_ali' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/shifted_ali.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/shifted_ali.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/shifted_ali.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/shifted_ali.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign.apat_pattern' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/apat_pattern.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/apat_pattern.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/apat_pattern.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/apat_pattern.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign._solexapairend' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/_solexapairend.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_solexapairend.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_solexapairend.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_solexapairend.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign._rassemble' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/_rassemble.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_rassemble.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_rassemble.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_rassemble.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign._qsrassemble' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/_qsrassemble.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_qsrassemble.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_qsrassemble.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_qsrassemble.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign._qsassemble' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/_qsassemble.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_qsassemble.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_qsassemble.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_qsassemble.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign._nws' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/_nws.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_nws.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_nws.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_nws.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign._freeendgapfm' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/_freeendgapfm.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_freeendgapfm.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_freeendgapfm.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_freeendgapfm.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign._freeendgap' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/_freeendgap.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_freeendgap.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_freeendgap.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_freeendgap.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign._dynamic' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/_dynamic.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_dynamic.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_dynamic.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_dynamic.cpython-312-aarch64-linux-gnu.so building 'obitools3.libalign._assemble' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/libalign/_assemble.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_assemble.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/libalign/_assemble.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_assemble.cpython-312-aarch64-linux-gnu.so building 'obitools3.format.tab' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/format aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/format/tab.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/format/tab.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/format/tab.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format/tab.cpython-312-aarch64-linux-gnu.so building 'obitools3.format.header' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/format/header.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/format/header.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/format/header.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format/header.cpython-312-aarch64-linux-gnu.so building 'obitools3.format.fastq' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/format/fastq.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/format/fastq.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/format/fastq.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format/fastq.cpython-312-aarch64-linux-gnu.so building 'obitools3.format.fasta' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/format/fasta.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/format/fasta.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/format/fasta.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format/fasta.cpython-312-aarch64-linux-gnu.so building 'obitools3.files.universalopener' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/files aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/files/universalopener.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/files/universalopener.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/files/universalopener.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/files/universalopener.cpython-312-aarch64-linux-gnu.so building 'obitools3.files.uncompress' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/files/uncompress.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/files/uncompress.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/files/uncompress.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/files/uncompress.cpython-312-aarch64-linux-gnu.so building 'obitools3.files.linebuffer' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/files/linebuffer.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/files/linebuffer.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/files/linebuffer.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/files/linebuffer.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.object' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/object.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/object.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/object.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/object.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.obiseq' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/obiseq.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/obiseq.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/obiseq.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/obiseq.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.dms' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/dms.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/dms.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/dms.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/dms.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.view.view' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/view aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/view/view.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/view/view.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/view/view.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view/view.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.view.typed_view.view_NUC_SEQS' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/view/typed_view aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/view/typed_view/view_NUC_SEQS.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/view/typed_view/view_NUC_SEQS.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/view/typed_view/view_NUC_SEQS.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view/typed_view/view_NUC_SEQS.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.taxo.taxo' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/taxo aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/taxo/taxo.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/taxo/taxo.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/taxo/taxo.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/taxo/taxo.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.column.column_idx' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/column/column_idx.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/column_idx.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/column_idx.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/column_idx.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.column.column' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/column/column.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/column.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/column.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/column.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.column.typed_column.str' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/column/typed_column/str.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/str.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/str.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/str.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.column.typed_column.seq' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/column/typed_column/seq.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/seq.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/seq.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/seq.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.column.typed_column.qual' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/column/typed_column/qual.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/qual.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/qual.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/qual.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.column.typed_column.int' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/column/typed_column/int.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/int.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/int.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/int.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.column.typed_column.float' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/column/typed_column/float.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/float.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/float.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/float.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.column.typed_column.char' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/column/typed_column/char.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/char.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/char.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/char.cpython-312-aarch64-linux-gnu.so building 'obitools3.dms.column.typed_column.bool' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/dms/column/typed_column/bool.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/bool.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/dms/column/typed_column/bool.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/bool.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.uniq' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/uniq.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/uniq.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/uniq.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/uniq.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.test' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/test.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/test.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/test.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/test.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.taxonomy' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/taxonomy.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/taxonomy.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/taxonomy.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/taxonomy.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.tail' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/tail.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/tail.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/tail.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/tail.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.stats' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/stats.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/stats.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/stats.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/stats.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.split' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/split.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/split.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/split.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/split.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.sort' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/sort.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/sort.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/sort.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/sort.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.rm' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/rm.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/rm.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/rm.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/rm.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.ngsfilter' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/ngsfilter.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/ngsfilter.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/ngsfilter.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/ngsfilter.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.ls' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/ls.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/ls.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/ls.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/ls.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.less' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/less.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/less.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/less.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/less.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.import' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/import.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/import.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/import.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/import.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.history' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/history.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/history.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/history.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/history.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.head' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/head.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/head.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/head.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/head.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.grep' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/grep.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/grep.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/grep.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/grep.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.export' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/export.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/export.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/export.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/export.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.ecotag' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/ecotag.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/ecotag.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/ecotag.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/ecotag.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.ecopcr' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/ecopcr.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/ecopcr.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/ecopcr.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/ecopcr.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.count' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/count.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/count.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/count.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/count.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.clean_dms' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/clean_dms.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/clean_dms.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/clean_dms.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/clean_dms.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.clean' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/clean.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/clean.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/clean.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/clean.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.cat' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/cat.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/cat.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/cat.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/cat.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.build_ref_db' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/build_ref_db.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/build_ref_db.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/build_ref_db.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/build_ref_db.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.annotate' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/annotate.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/annotate.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/annotate.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/annotate.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.alignpairedend' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/alignpairedend.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/alignpairedend.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/alignpairedend.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/alignpairedend.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.align' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/align.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/align.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/align.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/align.cpython-312-aarch64-linux-gnu.so building 'obitools3.commands.addtaxids' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/commands/addtaxids.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/addtaxids.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/commands/addtaxids.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/addtaxids.cpython-312-aarch64-linux-gnu.so building 'obitools3.apps.command' extension creating build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/apps/command.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/command.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/command.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/command.cpython-312-aarch64-linux-gnu.so building 'obitools3.apps.temp' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/apps/temp.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/temp.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/temp.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/temp.cpython-312-aarch64-linux-gnu.so building 'obitools3.apps.progress' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/apps/progress.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/progress.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/progress.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/progress.cpython-312-aarch64-linux-gnu.so building 'obitools3.apps.logging' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/apps/logging.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/logging.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/logging.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/logging.cpython-312-aarch64-linux-gnu.so building 'obitools3.apps.config' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/apps/config.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/config.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/config.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/config.cpython-312-aarch64-linux-gnu.so building 'obitools3.apps.arguments' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Isrc -Isrc/libecoPCR -Isrc/libjson -I/usr/include/python3.12 -c build/python/obitools3/apps/arguments.c -o build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/arguments.o -w -fPIC aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -O3 -w -I src -I src/libecoPCR -I src/libjson -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/build/python/obitools3/apps/arguments.o -L/usr/lib/python3/dist-packages -L/build/reproducible-path/obitools-3.0.1~b26+dfsg -L/usr/lib/aarch64-linux-gnu -lcobitools3 -o /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/arguments.cpython-312-aarch64-linux-gnu.so running build_scripts creating build/scripts-3.12 copying and adjusting scripts/obi -> build/scripts-3.12 changing mode of build/scripts-3.12/obi from 644 to 755 dh_auto_test -O--buildsystem=pybuild create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg' Traceback (most recent call last): File "/usr/bin/pybuild", line 604, in main(cfg) File "/usr/bin/pybuild", line 375, in main iversions = build_sorted(versions, impl=ipreter.impl) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/share/dh-python/dhpython/version.py", line 449, in build_sorted default_ver = default(impl) ^^^^^^^^^^^^^ File "/usr/share/dh-python/dhpython/version.py", line 380, in default raise ValueError("interpreter implementation not supported: %r" % impl) ValueError: interpreter implementation not supported: '' PYTHONPATH= \ http_proxy='127.0.0.1:9' \ dh_auto_install I: pybuild base:311: /usr/bin/python3 setup.py install --root '/build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_clib Build the build/cobject directory Run CMake CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- Configuring done (0.0s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject Compile the shared C library make[2]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' /usr/bin/cmake -S"/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" -B"/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject" --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject/CMakeFiles" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject//CMakeFiles/progress.marks" make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' make -f CMakeFiles/cobitools3.dir/build.make CMakeFiles/cobitools3.dir/depend make[4]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' cd "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject" && /usr/bin/cmake -E cmake_depends "Unix Makefiles" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/src" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject" "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject/CMakeFiles/cobitools3.dir/DependInfo.cmake" "--color=" make[4]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' make -f CMakeFiles/cobitools3.dir/build.make CMakeFiles/cobitools3.dir/build make[4]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' make[4]: Nothing to be done for 'CMakeFiles/cobitools3.dir/build'. make[4]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' [100%] Built target cobitools3 make[3]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' /usr/bin/cmake -E cmake_progress_start "/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject/CMakeFiles" 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Up-to-date: /build/reproducible-path/obitools-3.0.1~b26+dfsg/libcobitools3.so make[2]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg/build/cobject' running build_py running build_ext running build_scripts running install_lib creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3 copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/utils.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3 creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/arguments.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/config.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/logging.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/progress.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/temp.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/command.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps/optiongroups copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/optiongroups/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps/optiongroups copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/apps/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/addtaxids.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/align.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/alignpairedend.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/annotate.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/build_ref_db.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/cat.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/clean.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/clean_dms.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/count.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/ecopcr.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/ecotag.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/export.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/grep.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/head.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/history.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/import.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/less.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/ls.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/ngsfilter.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/rm.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/sort.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/split.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/stats.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/tail.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/taxonomy.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/test.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/uniq.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/commands/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/dms.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/obiseq.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/object.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/capi copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/capi/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/capi creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/column.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/column_idx.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/bool.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/char.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/float.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/int.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/qual.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/seq.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/str.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/typed_column/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/column/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/taxo copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/taxo/taxo.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/taxo copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/taxo/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/taxo creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/view copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view/view.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/view creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/view/typed_view copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view/typed_view/view_NUC_SEQS.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/view/typed_view copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view/typed_view/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/view/typed_view copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/view/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/view copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/dms/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/files copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/files/linebuffer.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/files copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/files/uncompress.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/files copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/files/universalopener.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/files copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/files/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/files creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/format copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format/fasta.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/format copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format/fastq.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/format copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format/header.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/format copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format/tab.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/format copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/format/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/format creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_assemble.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_dynamic.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_freeendgap.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_freeendgapfm.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_nws.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_qsassemble.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_qsrassemble.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_rassemble.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/_solexapairend.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/apat_pattern.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/shifted_ali.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/libalign/solexapairend.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/embl.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/embl_genbank_features.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/fasta.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/fastq.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/genbank.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/header.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/ngsfilter.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/tab.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/universal.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/parsers/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/uri copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/uri/decode.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/uri copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/uri/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/uri creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/writers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/writers/fasta.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/writers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/writers/fastq.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/writers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/writers/tab.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/writers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/writers/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/writers copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/__init__.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3 copying /build/reproducible-path/obitools-3.0.1~b26+dfsg/.pybuild/cpython3_3.12_obitools3/build/obitools3/version.py -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3 byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps/optiongroups/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/commands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/capi/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/typed_column/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/column/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/taxo/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/view/typed_view/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/view/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/dms/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/files/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/format/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/libalign/solexapairend.py to solexapairend.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/parsers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/uri/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/writers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/obitools3/version.py to version.cpython-312.pyc running install_egg_info running egg_info creating python/OBITools3.egg-info writing python/OBITools3.egg-info/PKG-INFO writing dependency_links to python/OBITools3.egg-info/dependency_links.txt writing top-level names to python/OBITools3.egg-info/top_level.txt writing manifest file 'python/OBITools3.egg-info/SOURCES.txt' reading manifest file 'python/OBITools3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.c' under directory 'python' warning: no files found matching '*.h' under directory 'python' warning: no files found matching '*.txt' under directory 'doc/sphinx/source' warning: no files found matching '*.rst' under directory 'doc/sphinx/source' warning: no files found matching '*.py' under directory 'doc/sphinx/source' warning: no files found matching '*.py' under directory 'doc/sphinx/sphinxext' warning: no files found matching 'doc/sphinx/Makefile' warning: no files found matching 'doc/sphinx/Doxyfile' adding license file 'LICENSE' writing manifest file 'python/OBITools3.egg-info/SOURCES.txt' Copying python/OBITools3.egg-info to /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/lib/python3.12/dist-packages/OBITools3-3.0.1b26.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/bin copying build/scripts-3.12/obi -> /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/bin changing mode of /build/reproducible-path/obitools-3.0.1~b26+dfsg/debian/obitools/usr/bin/obi to 755 make[1]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg' dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg' dh_installman find debian -name "ecoPCR.1*" -delete find debian -name "ecofind.1*" -delete make[1]: Leaving directory '/build/reproducible-path/obitools-3.0.1~b26+dfsg' dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dwz: debian/obitools/usr/lib/aarch64-linux-gnu/libcobitools3.so: .debug_info section not present dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: can't extract name and version from library name 'libcobitools3.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcobitools3.so' dpkg-shlibdeps: warning: symbol log10 used by debian/obitools/usr/lib/aarch64-linux-gnu/libcobitools3.so found in none of the libraries dpkg-shlibdeps: warning: symbol log used by debian/obitools/usr/lib/aarch64-linux-gnu/libcobitools3.so found in none of the libraries dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'obitools' in '../obitools_3.0.1~b26+dfsg-3_arm64.deb'. dpkg-deb: building package 'obitools-dbgsym' in '../obitools-dbgsym_3.0.1~b26+dfsg-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../obitools_3.0.1~b26+dfsg-3_arm64.buildinfo dpkg-genchanges --build=binary -O../obitools_3.0.1~b26+dfsg-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1848517 and its subdirectories I: Current time: Thu Jan 15 14:08:04 -12 2026 I: pbuilder-time-stamp: 1768529284 Fri Dec 13 19:45:07 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink01-arm64.debian.net. Fri Dec 13 19:45:07 UTC 2024 I: Preparing to do remote build '2' on codethink01-arm64.debian.net. Fri Dec 13 19:57:08 UTC 2024 I: Deleting $TMPDIR on codethink01-arm64.debian.net. Fri Dec 13 19:57:09 UTC 2024 I: obitools_3.0.1~b26+dfsg-3_arm64.changes: Format: 1.8 Date: Thu, 21 Nov 2024 16:40:55 +0100 Source: obitools Binary: obitools obitools-dbgsym Architecture: arm64 Version: 3.0.1~b26+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: obitools - programs to analyze NGS data in a DNA metabarcoding context Changes: obitools (3.0.1~b26+dfsg-3) unstable; urgency=medium . * Team upload. * Install the shared library to the correct directory and remove the rpath. * Add a basic smoke autopkgtest * Improve cross-building * Add another smoke test * Add tutorial data and an autopkgtest using it. * d/control: new upstream doesn't have any docs to build. Remove remaining sphinx parts. * Added patch to fix running on Python3.12+. Checksums-Sha1: 4fdaa5c491c3361284d3034686cc6e7fd95ee83e 16683820 obitools-dbgsym_3.0.1~b26+dfsg-3_arm64.deb 45bda10109b31faec935738a78dd946acfa7e29a 7310 obitools_3.0.1~b26+dfsg-3_arm64.buildinfo b1cb4e230d6c7e5a5943a0e3ed554f1e9729cb9d 5481376 obitools_3.0.1~b26+dfsg-3_arm64.deb Checksums-Sha256: 6f80b57ff596962fd7012ddfd0394396568ddf1fd9f32062b1af71aba45ca825 16683820 obitools-dbgsym_3.0.1~b26+dfsg-3_arm64.deb 264538476ddb9ca33d75b4e452ec9168820bc691d469d129883b390b6bb85721 7310 obitools_3.0.1~b26+dfsg-3_arm64.buildinfo 46f7f6bc9e75151d24e43c94ee5fcdbaf53ba897310bddf06db22902d6c2a579 5481376 obitools_3.0.1~b26+dfsg-3_arm64.deb Files: 4e2ef6d5c8a918aedec94adacd02c0b5 16683820 debug optional obitools-dbgsym_3.0.1~b26+dfsg-3_arm64.deb fa65c176522360f7ea26dbac56f7587d 7310 science optional obitools_3.0.1~b26+dfsg-3_arm64.buildinfo 98031d22ea1906d0b7ca27186fa2f889 5481376 science optional obitools_3.0.1~b26+dfsg-3_arm64.deb Fri Dec 13 19:57:10 UTC 2024 I: diffoscope 284 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_5-73888.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.4VNsIeEs/obitools_3.0.1~b26+dfsg-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.4VNsIeEs/obitools_3.0.1~b26+dfsg-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.4VNsIeEs/obitools_3.0.1~b26+dfsg-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.4VNsIeEs/b1/obitools_3.0.1~b26+dfsg-3_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.4VNsIeEs/b2/obitools_3.0.1~b26+dfsg-3_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.574s) 0.574s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.212s) 0.212s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 930ms CPU time consumed: 925ms Fri Dec 13 19:57:11 UTC 2024 I: diffoscope 284 found no differences in the changes files, and a .buildinfo file also exists. Fri Dec 13 19:57:11 UTC 2024 I: obitools from unstable built successfully and reproducibly on arm64. Fri Dec 13 19:57:12 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Dec 13 19:57:12 UTC 2024 I: Submitting 8.0K b1/obitools_3.0.1~b26+dfsg-3_arm64.buildinfo.asc Fri Dec 13 19:57:14 UTC 2024 I: Submitting 8.0K b2/obitools_3.0.1~b26+dfsg-3_arm64.buildinfo.asc Fri Dec 13 19:57:14 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Dec 13 19:57:14 UTC 2024 I: Done submitting .buildinfo files. Fri Dec 13 19:57:14 UTC 2024 I: Removing signed obitools_3.0.1~b26+dfsg-3_arm64.buildinfo.asc files: removed './b1/obitools_3.0.1~b26+dfsg-3_arm64.buildinfo.asc' removed './b2/obitools_3.0.1~b26+dfsg-3_arm64.buildinfo.asc'