Fri May 3 02:33:55 UTC 2024 I: starting to build libghemical/unstable/arm64 on jenkins on '2024-05-03 02:33' Fri May 3 02:33:55 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_20/16690/console.log Fri May 3 02:33:55 UTC 2024 I: Downloading source for unstable/libghemical=3.0.0-4.4 --2024-05-03 02:33:55-- http://deb.debian.org/debian/pool/main/libg/libghemical/libghemical_3.0.0-4.4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2314 (2.3K) [text/prs.lines.tag] Saving to: ‘libghemical_3.0.0-4.4.dsc’ 0K .. 100% 11.1M=0s 2024-05-03 02:33:55 (11.1 MB/s) - ‘libghemical_3.0.0-4.4.dsc’ saved [2314/2314] Fri May 3 02:33:55 UTC 2024 I: libghemical_3.0.0-4.4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libghemical Binary: libghemical-dev, libghemical5t64, libghemical-data Architecture: any all Version: 3.0.0-4.4 Maintainer: Debichem Team Uploaders: Michael Banck Homepage: http://bioinformatics.org/ghemical/ghemical/ Standards-Version: 4.5.0 Vcs-Browser: https:https://salsa.debian.org/debichem-team/libghemical Vcs-Git: https://salsa.debian.org:/debichem-team/libghemical.git Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), gfortran | fortran-compiler, flex, intltool (>= 0.40.0), pkg-config (>= 0.9.0), libblas-dev, liblapack-dev, libmopac7-dev (>= 1.14), libsc-dev (>= 2.3.1-2), mesa-common-dev, libglib2.0-dev Package-List: libghemical-data deb science optional arch=all libghemical-dev deb libdevel optional arch=any libghemical5t64 deb libs optional arch=any Checksums-Sha1: 330fd33968182ba383d0309e72a36f3c8bd02904 787947 libghemical_3.0.0.orig.tar.gz e4d47989f0b1c4a97ad5eb0b0507d988e40b5f4d 5424 libghemical_3.0.0-4.4.debian.tar.xz Checksums-Sha256: db8c3add0aa1f94c21016d60fa3f66fb194e56b8e9fceaa3860c603700efc3ac 787947 libghemical_3.0.0.orig.tar.gz 28a19e988ebf73a99a6092e74dbff5f49b70d742ed69045ea05e192797c617c8 5424 libghemical_3.0.0-4.4.debian.tar.xz Files: 1d5c9c19bb119470d2bb41a7e681eafd 787947 libghemical_3.0.0.orig.tar.gz b468f08e1ccbc59b8ea4bae43b65f136 5424 libghemical_3.0.0-4.4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEpi0s+9ULm1vzYNVLFZ61xO/Id0wFAmXfI/oACgkQFZ61xO/I d0yZcA/9F95dUdQuK385F4FJLpsoYBn9lR+Bh6Lphsf+LU8A7AUfWfnj2J7IelSo jmK2jtXOwbkLM+37nuz8q+1fkP6GOs9iuU41rZ5rP7PsApLs2XhRepKvnxDQFvSk kCXIoBV5D1kfhzDx90llkg3OLw1KGckpJunMNPQCk3jsXFANDWVdMJCBo99ZJem4 HfOvnSyUv9rBP4APzPN2Hu6fGduCdFArFQLczG3rKGkVyxuM1R2CAkCZcxBT6fMi OKUoau0gUZIRkRlHrVLLX6cJCyX+kQOy2BTAGtCOj6gHFidM9lQCCAnYk1NHt6DF gEON1j4agxeqgWXWUxFjqF6Ab6vRdE2TFX64rDacJEULqDDybWz1fp5KtLdAjoYw ftD61qQpVPQXDwQHJLh7jBKshNWnJbj6PWDrp3AhvEiZxOU4SC+gWvD0KKd/QriP iPQ01OpXl7wzpI9rQEewaxhPdbsGNV/Mf5PLU074R5YTfDFd8WLkWBsmFj451BIF TdZM8DwxcEN/4I8cT4G4wC83+LWe8URHcEDTjCTzLFxJ2wlkitVFrvJb0loVu6ri ZfrnKOSz1lFqz+40Ez5krpM2XgQOVSgMHvwUuOhckZJfkBp/+PFR5p0xVuR8F+LI ahOok5e+D2+tr0RcmRQ5q71+oqjqR/vZDJFAxuOQPOVF9bcg/IA= =G7an -----END PGP SIGNATURE----- Fri May 3 02:33:55 UTC 2024 I: Checking whether the package is not for us Fri May 3 02:33:55 UTC 2024 I: Starting 1st build on remote node codethink02-arm64.debian.net. Fri May 3 02:33:55 UTC 2024 I: Preparing to do remote build '1' on codethink02-arm64.debian.net. Fri May 3 02:35:47 UTC 2024 I: Deleting $TMPDIR on codethink02-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu May 2 14:33:57 -12 2024 I: pbuilder-time-stamp: 1714703637 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libghemical_3.0.0-4.4.dsc] I: copying [./libghemical_3.0.0.orig.tar.gz] I: copying [./libghemical_3.0.0-4.4.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Feb 28 12:15:54 2024 gpgv: using RSA key A62D2CFBD50B9B5BF360D54B159EB5C4EFC8774C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libghemical_3.0.0-4.4.dsc: no acceptable signature found dpkg-source: info: extracting libghemical in libghemical-3.0.0 dpkg-source: info: unpacking libghemical_3.0.0.orig.tar.gz dpkg-source: info: unpacking libghemical_3.0.0-4.4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-underlinking.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/145008/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='d2100d97727e4a0cb8de4f9ca76bcd78' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='145008' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.PTYd7oro/pbuilderrc_LAOZ --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.PTYd7oro/b1 --logfile b1/build.log libghemical_3.0.0-4.4.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink02-arm64 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 1 07:42 /bin -> usr/bin I: user script /srv/workspace/pbuilder/145008/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 12), gfortran | fortran-compiler, flex, intltool (>= 0.40.0), pkg-config (>= 0.9.0), libblas-dev, liblapack-dev, libmopac7-dev (>= 1.14), libsc-dev (>= 2.3.1-2), mesa-common-dev, libglib2.0-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19735 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on gfortran | fortran-compiler; however: Package gfortran is not installed. Package fortran-compiler is not installed. pbuilder-satisfydepends-dummy depends on flex; however: Package flex is not installed. pbuilder-satisfydepends-dummy depends on intltool (>= 0.40.0); however: Package intltool is not installed. pbuilder-satisfydepends-dummy depends on pkg-config (>= 0.9.0); however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libmopac7-dev (>= 1.14); however: Package libmopac7-dev is not installed. pbuilder-satisfydepends-dummy depends on libsc-dev (>= 2.3.1-2); however: Package libsc-dev is not installed. pbuilder-satisfydepends-dummy depends on mesa-common-dev; however: Package mesa-common-dev is not installed. pbuilder-satisfydepends-dummy depends on libglib2.0-dev; however: Package libglib2.0-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} flex{a} gettext{a} gettext-base{a} gfortran{a} gfortran-13{a} gfortran-13-aarch64-linux-gnu{a} gfortran-aarch64-linux-gnu{a} groff-base{a} ibverbs-providers{a} intltool{a} intltool-debian{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libblas-dev{a} libblas3{a} libblkid-dev{a} libbsd0{a} libcbor0.10{a} libclone-perl{a} libcom-err2{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-dev{a} libdrm-etnaviv1{a} libdrm-freedreno1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm-tegra0{a} libdrm2{a} libedit2{a} libelf1t64{a} libencode-locale-perl{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libfabric1{a} libffi-dev{a} libfido2-1{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libgfortran-13-dev{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgssapi-krb5-2{a} libhsa-runtime64-1{a} libhsakmt1{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libicu72{a} libint1{a} libio-html-perl{a} libio-socket-ssl-perl{a} libjs-jquery{a} libjs-jquery-ui{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmopac7-1gf{a} libmopac7-dev{a} libmount-dev{a} libmunge2{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3t64{a} libpciaccess-dev{a} libpciaccess0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpthread-stubs0-dev{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} librdmacm1t64{a} libreadline8t64{a} libsc-data{a} libsc-dev{a} libsc7v5{a} libselinux1-dev{a} libsensors-config{a} libsensors5{a} libsepol-dev{a} libsub-override-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libucx0{a} liburi-perl{a} libvulkan1{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxml-parser-perl{a} libxml2{a} libxnvctrl0{a} libxshmfence1{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} media-types{a} mesa-common-dev{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} perl-openssl-defaults{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-minimal{a} python3-packaging{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} uuid-dev{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libdata-dump-perl libfl-dev libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libio-compress-brotli-perl libmail-sendmail-perl libmailtools-perl lynx mesa-vulkan-drivers shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 208 newly installed, 0 to remove and 0 not upgraded. Need to get 141 MB of archives. After unpacking 620 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 flex arm64 2.6.4-8.2+b2 [413 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libpython3.11-minimal arm64 3.11.9-1 [813 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.2-1 [88.7 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 python3.11-minimal arm64 3.11.9-1 [1767 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.11.8-1 [26.3 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024a-4 [255 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-4 [69.3 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-4 [157 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 libpython3.11-stdlib arm64 3.11.9-1 [1775 kB] Get: 13 http://deb.debian.org/debian unstable/main arm64 python3.11 arm64 3.11.9-1 [602 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.11.8-1 [9332 B] Get: 15 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.11.8-1 [27.4 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.2.1-3 [1324 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20240203 [158 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-4 [1130 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40-8 [93.0 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.12.1-1 [1394 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 libbsd0 arm64 0.12.2-1 [129 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20230828-1+b1 [89.1 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libcbor0.10 arm64 0.10.2-1.2 [27.2 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libfido2-1 arm64 1.14.0-1+b2 [73.4 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.20.1-6+b1 [33.0 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1~rc2-1 [22.5 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.20.1-6+b1 [80.5 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get: 36 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.20.1-6+b1 [315 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.20.1-6+b1 [124 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 openssh-client arm64 1:9.7p1-4 [902 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.21-14 [496 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 50 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b3 [624 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.15.3 [901 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14-20240429-1 [361 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libgfortran-13-dev arm64 13.2.0-24 [401 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 gfortran-13-aarch64-linux-gnu arm64 13.2.0-24 [9297 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 gfortran-13 arm64 13.2.0-24 [12.2 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 gfortran-aarch64-linux-gnu arm64 4:13.2.0-7 [1288 B] Get: 63 http://deb.debian.org/debian unstable/main arm64 gfortran arm64 4:13.2.0-7 [1428 B] Get: 64 http://deb.debian.org/debian unstable/main arm64 libnl-3-200 arm64 3.7.0-0.3 [56.5 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libnl-route-3-200 arm64 3.7.0-0.3 [165 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 libibverbs1 arm64 50.0-2+b1 [58.2 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 ibverbs-providers arm64 50.0-2+b1 [315 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 liburi-perl all 5.28-1 [98.6 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.82-1 [96.9 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 libclone-perl arm64 0.46-1+b2 [13.6 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 libhttp-message-perl all 6.45-1 [82.0 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B] Get: 83 http://deb.debian.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.94-1+b1 [328 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.085-1 [218 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 libnet-http-perl all 6.23-1 [23.9 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 libwww-perl all 6.77-1 [183 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 libxml-parser-perl arm64 2.47-1+b2 [197 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 intltool all 0.51.0-6 [50.8 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.8.12-3.1+b2 [6508 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 libllvm17t64 arm64 1:17.0.6-11 [21.3 MB] Get: 94 http://deb.debian.org/debian unstable/main arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3+b1 [12.1 MB] Get: 95 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.120-2 [7688 B] Get: 96 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.120-2 [37.5 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.120-2 [21.0 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 libnuma1 arm64 2.0.18-1 [21.4 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 libhsakmt1 arm64 5.7.0-1 [57.6 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 libhsa-runtime64-1 arm64 5.7.1-2 [276 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 libamdhip64-5 arm64 5.7.1-3 [8698 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.0-3 [91.7 kB] Get: 103 http://deb.debian.org/debian unstable/main arm64 libblas-dev arm64 3.12.0-3 [98.2 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 uuid-dev arm64 2.40-8 [44.4 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 libblkid-dev arm64 2.40-8 [204 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 libdrm-radeon1 arm64 2.4.120-2 [21.1 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 libdrm-nouveau2 arm64 2.4.120-2 [18.7 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 libdrm-freedreno1 arm64 2.4.120-2 [20.8 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 libdrm-tegra0 arm64 2.4.120-2 [11.4 kB] Get: 110 http://deb.debian.org/debian unstable/main arm64 libdrm-etnaviv1 arm64 2.4.120-2 [14.1 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 libpciaccess0 arm64 0.17-3+b1 [51.1 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 libpciaccess-dev arm64 0.17-3+b1 [55.9 kB] Get: 113 http://deb.debian.org/debian unstable/main arm64 libdrm-dev arm64 2.4.120-2 [255 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-8.1+b3 [169 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 libevent-core-2.1-7t64 arm64 2.1.12-stable-8.1+b3 [125 kB] Get: 116 http://deb.debian.org/debian unstable/main arm64 libevent-extra-2.1-7t64 arm64 2.1.12-stable-8.1+b3 [102 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-8.1+b3 [54.3 kB] Get: 118 http://deb.debian.org/debian unstable/main arm64 libevent-openssl-2.1-7t64 arm64 2.1.12-stable-8.1+b3 [60.3 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 libevent-dev arm64 2.1.12-stable-8.1+b3 [303 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 librdmacm1t64 arm64 50.0-2+b1 [66.6 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 libfabric1 arm64 1.17.0-3+b1 [479 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 libffi-dev arm64 3.4.6-1 [57.0 kB] Get: 123 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-1+b1 [41.7 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.9-1+b1 [18.1 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.2-3+b1 [24.3 kB] Get: 126 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-1 [143 kB] Get: 127 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.7-1 [328 kB] Get: 128 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.7-1+b1 [775 kB] Get: 129 http://deb.debian.org/debian unstable/main arm64 libglapi-mesa arm64 24.0.6-1+b1 [46.8 kB] Get: 130 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.7-1+b1 [232 kB] Get: 131 http://deb.debian.org/debian unstable/main arm64 libxcb-dri2-0 arm64 1.17.0-1 [106 kB] Get: 132 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-1 [106 kB] Get: 133 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-1 [122 kB] Get: 134 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-1 [105 kB] Get: 135 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-1 [116 kB] Get: 136 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-1 [105 kB] Get: 137 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-1 [108 kB] Get: 138 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-1 [109 kB] Get: 139 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b1 [51.7 kB] Get: 140 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b1 [20.5 kB] Get: 141 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3-1+b1 [9080 B] Get: 142 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b2 [20.1 kB] Get: 143 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.3.280.0-1 [119 kB] Get: 144 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.0-9 [14.6 kB] Get: 145 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.0-9 [33.9 kB] Get: 146 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 24.0.6-1+b1 [7020 kB] Get: 147 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 24.0.6-1+b1 [150 kB] Get: 148 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-1+b1 [31.0 kB] Get: 149 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-1+b1 [90.9 kB] Get: 150 http://deb.debian.org/debian unstable/main arm64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 151 http://deb.debian.org/debian unstable/main arm64 x11proto-dev all 2024.1-1 [603 kB] Get: 152 http://deb.debian.org/debian unstable/main arm64 libxau-dev arm64 1:1.0.9-1+b1 [21.5 kB] Get: 153 http://deb.debian.org/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.2-3+b1 [40.6 kB] Get: 154 http://deb.debian.org/debian unstable/main arm64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 155 http://deb.debian.org/debian unstable/main arm64 libpthread-stubs0-dev arm64 0.4-1+b1 [5324 B] Get: 156 http://deb.debian.org/debian unstable/main arm64 libxcb1-dev arm64 1.17.0-1 [182 kB] Get: 157 http://deb.debian.org/debian unstable/main arm64 libx11-dev arm64 2:1.8.7-1+b1 [861 kB] Get: 158 http://deb.debian.org/debian unstable/main arm64 libglx-dev arm64 1.7.0-1+b1 [15.8 kB] Get: 159 http://deb.debian.org/debian unstable/main arm64 libgl-dev arm64 1.7.0-1+b1 [101 kB] Get: 160 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.78.4-7 [1364 kB] Get: 161 http://deb.debian.org/debian unstable/main arm64 libglib2.0-data all 2.78.4-7 [1225 kB] Get: 162 http://deb.debian.org/debian unstable/main arm64 libglib2.0-bin arm64 2.78.4-7 [113 kB] Get: 163 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 24.0-1 [45.5 kB] Get: 164 http://deb.debian.org/debian unstable/main arm64 libglib2.0-dev-bin arm64 2.78.4-7 [157 kB] Get: 165 http://deb.debian.org/debian unstable/main arm64 libsepol-dev arm64 3.5-2+b1 [335 kB] Get: 166 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.42-4+b1 [217 kB] Get: 167 http://deb.debian.org/debian unstable/main arm64 libpcre2-32-0 arm64 10.42-4+b1 [207 kB] Get: 168 http://deb.debian.org/debian unstable/main arm64 libpcre2-posix3 arm64 10.42-4+b1 [55.8 kB] Get: 169 http://deb.debian.org/debian unstable/main arm64 libpcre2-dev arm64 10.42-4+b1 [669 kB] Get: 170 http://deb.debian.org/debian unstable/main arm64 libselinux1-dev arm64 3.5-2+b2 [161 kB] Get: 171 http://deb.debian.org/debian unstable/main arm64 libmount-dev arm64 2.40-8 [25.9 kB] Get: 172 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-1+b2 [35.3 kB] Get: 173 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-1+b2 [29.3 kB] Get: 174 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-1+b2 [26.2 kB] Get: 175 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3.1 [915 kB] Get: 176 http://deb.debian.org/debian unstable/main arm64 libglib2.0-dev arm64 2.78.4-7 [1662 kB] Get: 177 http://deb.debian.org/debian unstable/main arm64 libhwloc15 arm64 2.10.0-1+b1 [140 kB] Get: 178 http://deb.debian.org/debian unstable/main arm64 libnuma-dev arm64 2.0.18-1 [37.4 kB] Get: 179 http://deb.debian.org/debian unstable/main arm64 libltdl7 arm64 2.4.7-7+b1 [393 kB] Get: 180 http://deb.debian.org/debian unstable/main arm64 libltdl-dev arm64 2.4.7-7+b1 [165 kB] Get: 181 http://deb.debian.org/debian unstable/main arm64 libhwloc-dev arm64 2.10.0-1+b1 [234 kB] Get: 182 http://deb.debian.org/debian unstable/main arm64 libxnvctrl0 arm64 535.171.04-1 [13.8 kB] Get: 183 http://deb.debian.org/debian unstable/main arm64 ocl-icd-libopencl1 arm64 2.3.2-1+b1 [39.3 kB] Get: 184 http://deb.debian.org/debian unstable/main arm64 libhwloc-plugins arm64 2.10.0-1+b1 [18.0 kB] Get: 185 http://deb.debian.org/debian unstable/main arm64 libnl-3-dev arm64 3.7.0-0.3 [101 kB] Get: 186 http://deb.debian.org/debian unstable/main arm64 libnl-route-3-dev arm64 3.7.0-0.3 [197 kB] Get: 187 http://deb.debian.org/debian unstable/main arm64 libibverbs-dev arm64 50.0-2+b1 [626 kB] Get: 188 http://deb.debian.org/debian unstable/main arm64 libint1 arm64 1.2.1-6 [7992 kB] Get: 189 http://deb.debian.org/debian unstable/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 190 http://deb.debian.org/debian unstable/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 191 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB] Get: 192 http://deb.debian.org/debian unstable/main arm64 liblapack-dev arm64 3.12.0-3 [3584 kB] Get: 193 http://deb.debian.org/debian unstable/main arm64 libmopac7-1gf arm64 1.15-6+b3 [426 kB] Get: 194 http://deb.debian.org/debian unstable/main arm64 libmopac7-dev arm64 1.15-6+b3 [534 kB] Get: 195 http://deb.debian.org/debian unstable/main arm64 libmunge2 arm64 0.5.15-4 [19.2 kB] Get: 196 http://deb.debian.org/debian unstable/main arm64 libpmix2t64 arm64 5.0.2-3 [580 kB] Get: 197 http://deb.debian.org/debian unstable/main arm64 libucx0 arm64 1.16.0+ds-5 [938 kB] Get: 198 http://deb.debian.org/debian unstable/main arm64 libopenmpi3t64 arm64 4.1.6-13 [2167 kB] Get: 199 http://deb.debian.org/debian unstable/main arm64 openmpi-common all 4.1.6-13 [169 kB] Get: 200 http://deb.debian.org/debian unstable/main arm64 libpmix-dev arm64 5.0.2-3 [3921 kB] Get: 201 http://deb.debian.org/debian unstable/main arm64 openmpi-bin arm64 4.1.6-13 [225 kB] Get: 202 http://deb.debian.org/debian unstable/main arm64 libopenmpi-dev arm64 4.1.6-13 [972 kB] Get: 203 http://deb.debian.org/debian unstable/main arm64 libsc-data all 2.3.1-22 [111 kB] Get: 204 http://deb.debian.org/debian unstable/main arm64 libsc7v5 arm64 2.3.1-22+b1 [1762 kB] Get: 205 http://deb.debian.org/debian unstable/main arm64 mpi-default-dev arm64 1.15 [3152 B] Get: 206 http://deb.debian.org/debian unstable/main arm64 libsc-dev arm64 2.3.1-22+b1 [309 kB] Get: 207 http://deb.debian.org/debian unstable/main arm64 mesa-common-dev arm64 24.0.6-1+b1 [2452 kB] Get: 208 http://deb.debian.org/debian unstable/main arm64 pkg-config arm64 1.8.1-1+b2 [14.0 kB] Fetched 141 MB in 1s (104 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19735 files and directories currently installed.) Preparing to unpack .../archives/m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package flex. Preparing to unpack .../flex_2.6.4-8.2+b2_arm64.deb ... Unpacking flex (2.6.4-8.2+b2) ... Selecting previously unselected package libpython3.11-minimal:arm64. Preparing to unpack .../libpython3.11-minimal_3.11.9-1_arm64.deb ... Unpacking libpython3.11-minimal:arm64 (3.11.9-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.6.2-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_arm64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:arm64 (3.11.9-1) ... Setting up libexpat1:arm64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20234 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_arm64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... 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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:arm64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_arm64.deb ... Unpacking libpython3.11-stdlib:arm64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_arm64.deb ... Unpacking python3.11 (3.11.9-1) ... 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Setting up libcbor0.10:arm64 (0.10.2-1.2) ... Setting up libclone-perl:arm64 (0.46-1+b2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglvnd0:arm64 (1.7.0-1+b1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:arm64 (1:5.45-3) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up libsensors-config (1:3.6.0-9) ... Setting up perl-openssl-defaults:arm64 (7+b2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libevent-2.1-7t64:arm64 (2.1.12-stable-8.1+b3) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libint1 (1.2.1-6) ... Setting up libcom-err2:arm64 (1.47.1~rc2-1) ... Setting up file (1:5.45-3) ... Setting up libffi-dev:arm64 (3.4.6-1) ... Setting up libpthread-stubs0-dev:arm64 (0.4-1+b1) ... Setting up libpcre2-16-0:arm64 (10.42-4+b1) ... Setting up libelf1t64:arm64 (0.191-1+b1) ... Setting up libkrb5support0:arm64 (1.20.1-6+b1) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Fri May 3 02:34:34 UTC 2024. Universal Time is now: Fri May 3 02:34:34 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:arm64 (4.8.12-3.1+b2) ... Setting up libpcre2-32-0:arm64 (10.42-4+b1) ... Setting up libglib2.0-0t64:arm64 (2.78.4-7) ... No schema files found: doing nothing. Setting up libblas3:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libglib2.0-data (2.78.4-7) ... Setting up libpkgconf3:arm64 (1.8.1-1+b2) ... Setting up libmunge2:arm64 (0.5.15-4) ... Setting up libx11-data (2:1.8.7-1) ... Setting up uuid-dev:arm64 (2.40-8) ... Setting up libhwloc15:arm64 (2.10.0-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.21-14) ... Setting up libsc-data (2.3.1-22) ... Setting up libsepol-dev:arm64 (3.5-2+b1) ... Setting up pkgconf-bin (1.8.1-1+b2) ... Setting up libsensors5:arm64 (1:3.6.0-9) ... Setting up libk5crypto3:arm64 (1.20.1-6+b1) ... Setting up libltdl7:arm64 (2.4.7-7+b1) ... Setting up libglapi-mesa:arm64 (24.0.6-1+b1) ... Setting up libgfortran5:arm64 (14-20240429-1) ... Setting up libvulkan1:arm64 (1.3.280.0-1) ... Setting up autoconf (2.71-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3.1) ... Setting up libnuma1:arm64 (2.0.18-1) ... Setting up libpcre2-posix3:arm64 (10.42-4+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up ocl-icd-libopencl1:arm64 (2.3.2-1+b1) ... Setting up libxshmfence1:arm64 (1.3-1+b1) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up libnl-3-200:arm64 (3.7.0-0.3) ... Setting up openmpi-common (4.1.6-13) ... Setting up libsub-override-perl (0.10-1) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libkrb5-3:arm64 (1.20.1-6+b1) ... Setting up libevent-core-2.1-7t64:arm64 (2.1.12-stable-8.1+b3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:arm64 (1.14.0-1+b2) ... Setting up libgfortran-13-dev:arm64 (13.2.0-24) ... Setting up openssl (3.2.1-3) ... Setting up libbsd0:arm64 (0.12.2-1) ... Setting up libdrm-common (2.4.120-2) ... Setting up readline-common (8.2-4) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3+b3) ... Setting up liburi-perl (5.28-1) ... Setting up libblas-dev:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode Setting up libnet-ssleay-perl:arm64 (1.94-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libblkid-dev:arm64 (2.40-8) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3+b1) ... Setting up flex (2.6.4-8.2+b2) ... Setting up liblapack3:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb1:arm64 (1.17.0-1) ... Setting up gettext (0.21-14+b1) ... Setting up libxcb-xfixes0:arm64 (1.17.0-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libxau-dev:arm64 (1:1.0.9-1+b1) ... Setting up libpcre2-dev:arm64 (10.42-4+b1) ... Setting up libtool (2.4.7-7) ... Setting up libselinux1-dev:arm64 (3.5-2+b2) ... Setting up libevent-pthreads-2.1-7t64:arm64 (2.1.12-stable-8.1+b3) ... Setting up libxcb-glx0:arm64 (1.17.0-1) ... Setting up libedit2:arm64 (3.1-20230828-1+b1) ... Setting up libevent-openssl-2.1-7t64:arm64 (2.1.12-stable-8.1+b3) ... Setting up libglib2.0-bin (2.78.4-7) ... Setting up libnet-http-perl (6.23-1) ... Setting up gfortran-13-aarch64-linux-gnu (13.2.0-24) ... Setting up libxcb-shm0:arm64 (1.17.0-1) ... Setting up libmopac7-1gf (1.15-6+b3) ... Setting up pkgconf:arm64 (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnuma-dev:arm64 (2.0.18-1) ... Setting up libnl-route-3-200:arm64 (3.7.0-0.3) ... Setting up libxcb-present0:arm64 (1.17.0-1) ... Setting up dh-autoreconf (20) ... Setting up libltdl-dev:arm64 (2.4.7-7+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libxdmcp-dev:arm64 (1:1.1.2-3+b1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libllvm17t64:arm64 (1:17.0.6-11) ... Setting up libxcb-sync1:arm64 (1.17.0-1) ... Setting up gfortran-13 (13.2.0-24) ... Setting up liblapack-dev:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode Setting up libgssapi-krb5-2:arm64 (1.20.1-6+b1) ... Setting up pkg-config:arm64 (1.8.1-1+b2) ... Setting up libevent-extra-2.1-7t64:arm64 (2.1.12-stable-8.1+b3) ... Setting up libreadline8t64:arm64 (8.2-4) ... Setting up libxcb-dri2-0:arm64 (1.17.0-1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdrm2:arm64 (2.4.120-2) ... Setting up libnl-3-dev:arm64 (3.7.0-0.3) ... Setting up groff-base (1.23.0-4) ... Setting up libxcb-randr0:arm64 (1.17.0-1) ... Setting up libhtml-parser-perl:arm64 (3.82-1) ... Setting up libx11-6:arm64 (2:1.8.7-1+b1) ... Setting up gfortran-aarch64-linux-gnu (4:13.2.0-7) ... Setting up libhwloc-dev:arm64 (2.10.0-1+b1) ... Setting up libamd-comgr2:arm64 (6.0+git20231212.4510c28+dfsg-3+b1) ... Setting up libmount-dev:arm64 (2.40-8) ... Setting up libio-socket-ssl-perl (2.085-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libdrm-amdgpu1:arm64 (2.4.120-2) ... Setting up libxcb-dri3-0:arm64 (1.17.0-1) ... Setting up libx11-xcb1:arm64 (2:1.8.7-1+b1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libibverbs1:arm64 (50.0-2+b1) ... Setting up libdrm-nouveau2:arm64 (2.4.120-2) ... Setting up libdrm-etnaviv1:arm64 (2.4.120-2) ... Setting up libxcb1-dev:arm64 (1.17.0-1) ... Setting up ibverbs-providers:arm64 (50.0-2+b1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libdrm-radeon1:arm64 (2.4.120-2) ... Setting up openssh-client (1:9.7p1-4) ... Setting up libmopac7-dev (1.15-6+b3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libpython3.11-stdlib:arm64 (3.11.9-1) ... Setting up libgl1-mesa-dri:arm64 (24.0.6-1+b1) ... Setting up libx11-dev:arm64 (2:1.8.7-1+b1) ... Setting up libxext6:arm64 (2:1.3.4-1+b1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:13.2.0-7) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libxxf86vm1:arm64 (1:1.1.4-1+b2) ... Setting up libxnvctrl0:arm64 (535.171.04-1) ... Setting up libnl-route-3-dev:arm64 (3.7.0-0.3) ... Setting up libxfixes3:arm64 (1:6.0.0-2+b1) ... Setting up libevent-dev (2.1.12-stable-8.1+b3) ... Setting up libdrm-freedreno1:arm64 (2.4.120-2) ... Setting up libdrm-tegra0:arm64 (2.4.120-2) ... Setting up librdmacm1t64:arm64 (50.0-2+b1) ... Setting up libhsakmt1:arm64 (5.7.0-1) ... Setting up libpython3-stdlib:arm64 (3.11.8-1) ... Setting up libfabric1:arm64 (1.17.0-3+b1) ... Setting up python3.11 (3.11.9-1) ... Setting up libdrm-dev:arm64 (2.4.120-2) ... Setting up libglx-mesa0:arm64 (24.0.6-1+b1) ... Setting up libglx0:arm64 (1.7.0-1+b1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libibverbs-dev:arm64 (50.0-2+b1) ... Setting up libhwloc-plugins:arm64 (2.10.0-1+b1) ... Setting up python3-packaging (24.0-1) ... Setting up libgl1:arm64 (1.7.0-1+b1) ... Setting up libpmix2t64:arm64 (5.0.2-3) ... Setting up libhsa-runtime64-1 (5.7.1-2) ... Setting up libglx-dev:arm64 (1.7.0-1+b1) ... Setting up libgl-dev:arm64 (1.7.0-1+b1) ... Setting up libpmix-dev:arm64 (5.0.2-3) ... Setting up libglib2.0-dev-bin (2.78.4-7) ... Setting up libamdhip64-5 (5.7.1-3) ... Setting up libglib2.0-dev:arm64 (2.78.4-7) ... Setting up mesa-common-dev:arm64 (24.0.6-1+b1) ... Setting up libucx0:arm64 (1.16.0+ds-5) ... Setting up libopenmpi3t64:arm64 (4.1.6-13) ... Setting up openmpi-bin (4.1.6-13) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libsc7v5 (2.3.1-22+b1) ... Setting up libopenmpi-dev:arm64 (4.1.6-13) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/openmpi/include to provide /usr/include/aarch64-linux-gnu/mpi (mpi-aarch64-linux-gnu) in auto mode Setting up mpi-default-dev (1.15) ... Setting up libsc-dev (2.3.1-22+b1) ... Setting up libwww-perl (6.77-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libxml-parser-perl (2.47-1+b2) ... Setting up intltool (0.51.0-6) ... Processing triggers for libc-bin (2.37-19) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.34-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/libghemical-3.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libghemical_3.0.0-4.4_source.changes dpkg-buildpackage: info: source package libghemical dpkg-buildpackage: info: source version 3.0.0-4.4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Benjamin Drung dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --parallel --with autoreconf dh_clean debian/rules build dh build --parallel --with autoreconf dh_update_autotools_config cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead cp: warning: behavior of -n is non-portable and may change in future; use --update=none instead dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. configure.ac:26: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:26: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10887: AM_CONFIG_HEADER is expanded from... configure.ac:26: the top level configure.ac:32: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:32: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10887: AM_CONFIG_HEADER is expanded from... configure.ac:32: the top level configure.ac:91: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:91: You should run autoupdate. aclocal.m4:799: AC_PROG_LIBTOOL is expanded from... configure.ac:91: the top level configure.ac:105: warning: The macro `GLIB_GNU_GETTEXT' is obsolete. configure.ac:105: You should run autoupdate. aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... aclocal.m4:73: GLIB_LC_MESSAGES is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_OUTPUT_COMMANDS' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/status.m4:1025: AC_OUTPUT_COMMANDS is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:126: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:126: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:164: warning: The macro `AC_PROG_CC_STDC' is obsolete. configure.ac:164: You should run autoupdate. ./lib/autoconf/c.m4:1666: AC_PROG_CC_STDC is expanded from... configure.ac:164: the top level configure.ac:176: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:176: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:176: the top level configure.ac:86: installing './compile' configure.ac:42: installing './missing' /usr/share/automake-1.16/am/ltlibrary.am: warning: 'libghemical.la': linking libtool libraries using a non-POSIX /usr/share/automake-1.16/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac' src/Makefile.am:1: while processing Libtool library 'libghemical.la' src/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_configure -- --enable-mpqc --enable-mopac7 --disable-sctest ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-mpqc --enable-mopac7 --disable-sctest checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ar... /usr/bin/ar checking for sh... /bin/bash checking whether make sets $(MAKE)... (cached) yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking whether NLS is requested... yes checking for intltool >= 0.40.0... 0.51.0 found checking for intltool-update... /usr/bin/intltool-update checking for intltool-merge... /usr/bin/intltool-merge checking for intltool-extract... /usr/bin/intltool-extract checking for xgettext... /usr/bin/xgettext checking for msgmerge... /usr/bin/msgmerge checking for msgfmt... /usr/bin/msgfmt checking for gmsgfmt... /usr/bin/msgfmt checking for perl... /usr/bin/perl checking for perl >= 5.8.1... 5.38.2 checking for XML::Parser... ok checking for locale.h... yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for libintl.h... yes checking for ngettext in libc... yes checking for dgettext in libc... yes checking for bind_textdomain_codeset... yes checking for msgfmt... (cached) /usr/bin/msgfmt checking for dcgettext... yes checking if msgfmt accepts -c... yes checking for gmsgfmt... (cached) /usr/bin/msgfmt checking for xgettext... (cached) /usr/bin/xgettext checking whether build environment is sane... yes checking for acos in -lm... yes checking for main in -lblas... yes checking for main in -llapack... yes checking for sc-config... /usr/bin/sc-config checking SC - version... yes checking for libmopac7 >= 1.13... yes checking for GL/gl.h... yes checking for inline... inline checking for an ANSI C-conforming const... yes checking for egrep... (cached) /usr/bin/grep -E configure: build options: ^^^^^^^^^^^^^^ enable MPQC : yes enable MOPAC7 : yes checking that generated files are newer than configure... done checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating libghemical.pc config.status: creating Makefile config.status: creating bin/Makefile config.status: creating bin/amber/Makefile config.status: creating bin/builder/Makefile config.status: creating bin/param_mm/Makefile config.status: creating bin/param_mm/default/Makefile config.status: creating bin/param_mm/prmfit/Makefile config.status: creating bin/param_mm/tripos52/Makefile config.status: creating bin/param_sf/Makefile config.status: creating bin/param_sf/default/Makefile config.status: creating po/Makefile.in config.status: creating src/Makefile config.status: creating src/libghemicalconfig.h config.status: creating src/libghemical-features.h config.status: executing src/libghemicalconfig2.h commands config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing stamp.h commands config.status: executing po/stamp-it commands make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' Making all in src make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' make all-am make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o atom.lo atom.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o bond.lo bond.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o constraint.lo constraint.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o model.lo model.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o engine.lo engine.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o typerule.lo typerule.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o utility.lo utility.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o chn_info.lo chn_info.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o seqbuild.lo seqbuild.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o mfinder.lo mfinder.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_qm.lo eng1_qm.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_qm_mpqc.lo eng1_qm_mpqc.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c atom.cpp -fPIC -DPIC -o .libs/atom.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c constraint.cpp -fPIC -DPIC -o .libs/constraint.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c model.cpp -fPIC -DPIC -o .libs/model.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c mfinder.cpp -fPIC -DPIC -o .libs/mfinder.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_qm_mpqc.cpp -fPIC -DPIC -o .libs/eng1_qm_mpqc.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c engine.cpp -fPIC -DPIC -o .libs/engine.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c seqbuild.cpp -fPIC -DPIC -o .libs/seqbuild.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c typerule.cpp -fPIC -DPIC -o .libs/typerule.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c utility.cpp -fPIC -DPIC -o .libs/utility.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c chn_info.cpp -fPIC -DPIC -o .libs/chn_info.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c bond.cpp -fPIC -DPIC -o .libs/bond.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_qm.cpp -fPIC -DPIC -o .libs/eng1_qm.o In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:102: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm_mpqc.cpp:22: /usr/include/sc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | libghemicalconfig.h:105: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/sc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | libghemicalconfig.h:108: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | /usr/include/sc/scconfig.h:287: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:114: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | /usr/include/sc/scconfig.h:293: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | In file included from /usr/include/sc/util/group/linkage.h:32, from /usr/include/sc/math/scmat/linkage.h:34, from /usr/include/sc/chemistry/qc/scf/linkage.h:37, from eng1_qm_mpqc.cpp:44: /usr/include/sc/scconfig.h:281: warning: "PACKAGE_NAME" redefined 281 | #define PACKAGE_NAME "" | libghemicalconfig.h:102: note: this is the location of the previous definition 102 | #define PACKAGE_NAME "libghemical" | /usr/include/sc/scconfig.h:284: warning: "PACKAGE_STRING" redefined 284 | #define PACKAGE_STRING "" | libghemicalconfig.h:105: note: this is the location of the previous definition 105 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/sc/scconfig.h:287: warning: "PACKAGE_TARNAME" redefined 287 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:108: note: this is the location of the previous definition 108 | #define PACKAGE_TARNAME "libghemical" | /usr/include/sc/scconfig.h:293: warning: "PACKAGE_VERSION" redefined 293 | #define PACKAGE_VERSION "" | libghemicalconfig.h:114: note: this is the location of the previous definition 114 | #define PACKAGE_VERSION "3.0.0" | In file included from local_i18n.h:38, from model.cpp:46: libghemicalconfig.h:102: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from model.cpp:35: /usr/include/sc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | libghemicalconfig.h:105: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/sc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | libghemicalconfig.h:108: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | /usr/include/sc/scconfig.h:287: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:114: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | /usr/include/sc/scconfig.h:293: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | In file included from local_i18n.h:38, from eng1_qm.cpp:27: libghemicalconfig.h:102: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm.cpp:24: /usr/include/sc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | libghemicalconfig.h:105: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/sc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | libghemicalconfig.h:108: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | /usr/include/sc/scconfig.h:287: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:114: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | /usr/include/sc/scconfig.h:293: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | atom.cpp:33:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 33 | element element::current_element = element("C"); | ^~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c constraint.cpp -o constraint.o >/dev/null 2>&1 In file included from eng1_qm_mpqc.h:32: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ utility.cpp: In function 'void DefineSecondaryStructure(model*)': utility.cpp:308:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 308 | i32s tmp1[2] = { n1, n2 }; | ^~ utility.cpp:309:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 309 | i32s tmp2[2] = { n1, n2 + 4 }; | ^~ utility.cpp:349:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:349:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:352:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:352:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:355:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:355:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:358:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:358:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:361:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:361:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:364:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:364:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:367:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:367:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:370:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:370:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)': typerule.cpp:172:56: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'long unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 172 | i32s tmp1[2] = { strlen(buffer), 0 }; | ~~~~~~^~~~~~~~ In file included from eng1_qm.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c bond.cpp -o bond.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c atom.cpp -o atom.o >/dev/null 2>&1 In file included from model.cpp:31: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c chn_info.cpp -o chn_info.o >/dev/null 2>&1 eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_qm.cpp -o eng1_qm.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c utility.cpp -o utility.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c typerule.cpp -o typerule.o >/dev/null 2>&1 model.cpp: In member function 'bool model::GetCRDSetVisible(i32u)': model.cpp:319:30: warning: control reaches end of non-void function [-Wreturn-type] 319 | else assertion_failed(__FILE__, __LINE__, "index overflow"); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_qm_mopac.lo eng1_qm_mopac.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_mm.lo eng1_mm.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_mm_tripos52.lo eng1_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c mfinder.cpp -o mfinder.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_qm_mopac.cpp -fPIC -DPIC -o .libs/eng1_qm_mopac.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o tab_mm_tripos52.lo tab_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_mm.cpp -fPIC -DPIC -o .libs/eng1_mm.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_mm_tripos52.cpp -fPIC -DPIC -o .libs/eng1_mm_tripos52.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c engine.cpp -o engine.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c tab_mm_tripos52.cpp -fPIC -DPIC -o .libs/tab_mm_tripos52.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_mm_default.lo eng1_mm_default.cpp In file included from eng1_qm_mopac.h:30, from eng1_qm_mopac.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o tab_mm_default.lo tab_mm_default.cpp eng1_qm_mopac.cpp: In destructor 'eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In destructor 'virtual eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In member function 'void eng1_qm_mopac::FixMeLaterTSS()': eng1_qm_mopac.cpp:178:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 178 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:181:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 181 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_mm_prmfit.lo eng1_mm_prmfit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_mm_default.cpp -fPIC -DPIC -o .libs/eng1_mm_default.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c tab_mm_default.cpp -fPIC -DPIC -o .libs/tab_mm_default.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_mm_prmfit.cpp -fPIC -DPIC -o .libs/eng1_mm_prmfit.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_mm.cpp -o eng1_mm.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_qm_mopac.cpp -o eng1_qm_mopac.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_qm_mpqc.cpp -o eng1_qm_mpqc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o tab_mm_prmfit.lo tab_mm_prmfit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c tab_mm_prmfit.cpp -fPIC -DPIC -o .libs/tab_mm_prmfit.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_sf.lo eng1_sf.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_sf.cpp -fPIC -DPIC -o .libs/eng1_sf.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c tab_mm_tripos52.cpp -o tab_mm_tripos52.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_sf_ua.lo eng1_sf_ua.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng1_sf_cg.lo eng1_sf_cg.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c seqbuild.cpp -o seqbuild.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_sf_ua.cpp -fPIC -DPIC -o .libs/eng1_sf_ua.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_sf_cg.cpp -fPIC -DPIC -o .libs/eng1_sf_cg.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_sf_ua.cpp -o eng1_sf_ua.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_sf_cg.cpp -o eng1_sf_cg.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o eng2_qm_mm.lo eng2_qm_mm.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o notice.lo notice.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_mm_tripos52.cpp -o eng1_mm_tripos52.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng2_qm_mm.cpp -fPIC -DPIC -o .libs/eng2_qm_mm.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c notice.cpp -fPIC -DPIC -o .libs/notice.o In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:102: warning: "PACKAGE_NAME" redefined 102 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/sc/util/misc/exenv.h:37, from /usr/include/sc/util/class/class.h:46, from /usr/include/sc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from eng2_qm_mm.cpp:22: /usr/include/sc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_NAME "" | libghemicalconfig.h:105: warning: "PACKAGE_STRING" redefined 105 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/sc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_STRING "" | libghemicalconfig.h:108: warning: "PACKAGE_TARNAME" redefined 108 | #define PACKAGE_TARNAME "libghemical" | /usr/include/sc/scconfig.h:287: note: this is the location of the previous definition 287 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:114: warning: "PACKAGE_VERSION" redefined 114 | #define PACKAGE_VERSION "3.0.0" | /usr/include/sc/scconfig.h:293: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c tab_mm_prmfit.cpp -o tab_mm_prmfit.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o conjgrad.lo conjgrad.cpp In file included from eng2_qm_mm.h:28: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c conjgrad.cpp -fPIC -DPIC -o .libs/conjgrad.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c notice.cpp -o notice.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng2_qm_mm.cpp -o eng2_qm_mm.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o intcrd.lo intcrd.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_mm_default.cpp -o eng1_mm_default.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_mm_prmfit.cpp -o eng1_mm_prmfit.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c intcrd.cpp -fPIC -DPIC -o .libs/intcrd.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c conjgrad.cpp -o conjgrad.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c tab_mm_default.cpp -o tab_mm_default.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o search.lo search.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c search.cpp -fPIC -DPIC -o .libs/search.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c model.cpp -o model.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o geomopt.lo geomopt.cpp /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o moldyn.lo moldyn.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c intcrd.cpp -o intcrd.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o pop_ana.lo pop_ana.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c moldyn.cpp -fPIC -DPIC -o .libs/moldyn.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c geomopt.cpp -fPIC -DPIC -o .libs/geomopt.o In file included from search.h:35, from search.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c pop_ana.cpp -fPIC -DPIC -o .libs/pop_ana.o /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o sasaeval.lo sasaeval.cpp In file included from geomopt.h:31, from geomopt.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c moldyn.cpp -o moldyn.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -o resonance.lo resonance.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c geomopt.cpp -o geomopt.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c sasaeval.cpp -fPIC -DPIC -o .libs/sasaeval.o In file included from pop_ana.h:31, from pop_ana.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c resonance.cpp -fPIC -DPIC -o .libs/resonance.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c search.cpp -o search.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c pop_ana.cpp -o pop_ana.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c resonance.cpp -o resonance.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c sasaeval.cpp -o sasaeval.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/aarch64-linux-gnu/openmpi/include -I/usr/lib/aarch64-linux-gnu/openmpi/include/openmpi -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c eng1_sf.cpp -o eng1_sf.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -version-info 5:1:0 -Wl,-z,relro -Wl,--as-needed -o libghemical.la -rpath /usr/lib/aarch64-linux-gnu atom.lo bond.lo constraint.lo model.lo engine.lo typerule.lo utility.lo chn_info.lo seqbuild.lo mfinder.lo eng1_qm.lo eng1_qm_mpqc.lo eng1_qm_mopac.lo eng1_mm.lo eng1_mm_tripos52.lo tab_mm_tripos52.lo eng1_mm_default.lo tab_mm_default.lo eng1_mm_prmfit.lo tab_mm_prmfit.lo eng1_sf.lo eng1_sf_ua.lo eng1_sf_cg.lo eng2_qm_mm.lo notice.lo conjgrad.lo intcrd.lo search.lo geomopt.lo moldyn.lo pop_ana.lo sasaeval.lo resonance.lo -llapack -lblas -lm -L/usr/lib -lmopac7 -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_cxx -lmpi libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/13/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/13/crtbeginS.o .libs/atom.o .libs/bond.o .libs/constraint.o .libs/model.o .libs/engine.o .libs/typerule.o .libs/utility.o .libs/chn_info.o .libs/seqbuild.o .libs/mfinder.o .libs/eng1_qm.o .libs/eng1_qm_mpqc.o .libs/eng1_qm_mopac.o .libs/eng1_mm.o .libs/eng1_mm_tripos52.o .libs/tab_mm_tripos52.o .libs/eng1_mm_default.o .libs/tab_mm_default.o .libs/eng1_mm_prmfit.o .libs/tab_mm_prmfit.o .libs/eng1_sf.o .libs/eng1_sf_ua.o .libs/eng1_sf_cg.o .libs/eng2_qm_mm.o .libs/notice.o .libs/conjgrad.o .libs/intcrd.o .libs/search.o .libs/geomopt.o .libs/moldyn.o .libs/pop_ana.o .libs/sasaeval.o .libs/resonance.o -llapack -lblas -L/usr/lib -lmopac7 -L/usr/lib/aarch64-linux-gnu/openmpi/lib -lmpi_cxx -lmpi -L/usr/lib/gcc/aarch64-linux-gnu/13 -L/usr/lib/gcc/aarch64-linux-gnu/13/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/13/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/13/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/13/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/13/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -mbranch-protection=standard -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-soname -Wl,libghemical.so.5 -o .libs/libghemical.so.5.0.1 libtool: link: (cd ".libs" && rm -f "libghemical.so.5" && ln -s "libghemical.so.5.0.1" "libghemical.so.5") libtool: link: (cd ".libs" && rm -f "libghemical.so" && ln -s "libghemical.so.5.0.1" "libghemical.so") libtool: link: /usr/bin/ar cr .libs/libghemical.a atom.o bond.o constraint.o model.o engine.o typerule.o utility.o chn_info.o seqbuild.o mfinder.o eng1_qm.o eng1_qm_mpqc.o eng1_qm_mopac.o eng1_mm.o eng1_mm_tripos52.o tab_mm_tripos52.o eng1_mm_default.o tab_mm_default.o eng1_mm_prmfit.o tab_mm_prmfit.o eng1_sf.o eng1_sf_ua.o eng1_sf_cg.o eng2_qm_mm.o notice.o conjgrad.o intcrd.o search.o geomopt.o moldyn.o pop_ana.o sasaeval.o resonance.o libtool: link: ranlib .libs/libghemical.a libtool: link: ( cd ".libs" && rm -f "libghemical.la" && ln -s "../libghemical.la" "libghemical.la" ) make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/src' make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/src' Making all in bin make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin' Making all in amber make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/amber' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/amber' Making all in builder make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/builder' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/builder' Making all in param_mm make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' Making all in default make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/default' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/default' Making all in prmfit make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/prmfit' Making all in tripos52 make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' Making all in param_sf make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' Making all in default make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf/default' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf/default' make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin' make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin' Making all in po make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/po' file=`echo de | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file de.po file=`echo fi | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file fi.po file=`echo mk | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file mk.po file=`echo pt_BR | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file pt_BR.po file=`echo ru | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file ru.po file=`echo sq | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file sq.po make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/po' make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_test make -j12 check "TESTSUITEFLAGS=-j12 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' Making check in src make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/src' Making check in bin make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin' Making check in amber make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/amber' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/amber' Making check in builder make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/builder' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/builder' Making check in param_mm make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' Making check in default make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/default' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/default' Making check in prmfit make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/prmfit' Making check in tripos52 make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' Making check in param_sf make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' Making check in default make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf/default' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf/default' make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin' make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin' Making check in po make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/po' INTLTOOL_EXTRACT="/usr/bin/intltool-extract" XGETTEXT="/usr/bin/xgettext" srcdir=. /usr/bin/intltool-update --gettext-package libghemical --pot rm -f missing notexist srcdir=. /usr/bin/intltool-update -m if [ -r missing -o -r notexist ]; then \ exit 1; \ fi make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/po' make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --parallel --with autoreconf dh_testroot dh_prep dh_auto_install make -j1 install DESTDIR=/build/reproducible-path/libghemical-3.0.0/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' Making install in src make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libghemical.la '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libghemical.so.5.0.1 /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 libtool: install: (cd /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libghemical.so.5.0.1 libghemical.so.5 || { rm -f libghemical.so.5 && ln -s libghemical.so.5.0.1 libghemical.so.5; }; }) libtool: install: (cd /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libghemical.so.5.0.1 libghemical.so || { rm -f libghemical.so && ln -s libghemical.so.5.0.1 libghemical.so; }; }) libtool: install: /usr/bin/install -c .libs/libghemical.lai /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/libghemical.la libtool: install: /usr/bin/install -c .libs/libghemical.a /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/libghemical.a libtool: install: chmod 644 /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/libghemical.a libtool: install: ranlib /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/libghemical.a libtool: warning: remember to run 'libtool --finish /usr/lib/aarch64-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/include/ghemical' /usr/bin/install -c -m 644 libghemicaldefine.h libghemical-features.h local_i18n.h typedef.h v3d.h atom.h bond.h constraint.h model.h engine.h typerule.h utility.h chn_info.h seqbuild.h mfinder.h eng1_qm.h eng1_qm_mpqc.h eng1_qm_mopac.h eng1_mm.h eng1_mm_tripos52.h tab_mm_tripos52.h eng1_mm_default.h tab_mm_default.h eng1_mm_prmfit.h tab_mm_prmfit.h eng1_sf.h eng1_sf_ua.h eng1_sf_cg.h eng2_qm_mm.h notice.h conjgrad.h intcrd.h search.h geomopt.h moldyn.h pop_ana.h sasaeval.h resonance.h '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/include/ghemical' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/src' make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/src' Making install in bin make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin' Making install in amber make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/amber' make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/amber' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/amber' /usr/bin/install -c -m 644 all_amino94_MOD.in all_aminoct94.in all_aminont94.in all_nuc94_MOD.in parm99_frcmod_ff99SB.dat '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/amber' make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/amber' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/amber' Making install in builder make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/builder' make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/builder' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/builder' /usr/bin/install -c -m 644 amino.txt nucleic.txt '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/builder' make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/builder' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/builder' Making install in param_mm make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' Making install in default make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/default' make[5]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/default' make[5]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/default' /usr/bin/install -c -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/default' make[5]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/default' make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/default' Making install in prmfit make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/prmfit' make[5]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/prmfit' make[5]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/prmfit' /usr/bin/install -c -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/prmfit' make[5]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/prmfit' Making install in tripos52 make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/tripos52' make[5]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/tripos52' make[5]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/tripos52' /usr/bin/install -c -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt parameters5.txt '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_mm/tripos52' make[5]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' make[5]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_mm' Making install in param_sf make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' Making install in default make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf/default' make[5]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf/default' make[5]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_sf/default' /usr/bin/install -c -m 644 loopdip.txt looptor.txt nonbonded.txt '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/libghemical/3.0.0/param_sf/default' make[5]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf/default' make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf/default' make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[5]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin/param_sf' make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin' make[4]: Entering directory '/build/reproducible-path/libghemical-3.0.0/bin' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin' make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/bin' Making install in po make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/po' linguas="de fi mk pt_BR ru sq "; \ for lang in $linguas; do \ dir=/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/locale/$lang/LC_MESSAGES; \ /bin/bash /build/reproducible-path/libghemical-3.0.0/install-sh -d $dir; \ if test -r $lang.gmo; then \ /usr/bin/install -c -m 644 $lang.gmo $dir/libghemical.mo; \ echo "installing $lang.gmo as $dir/libghemical.mo"; \ else \ /usr/bin/install -c -m 644 ./$lang.gmo $dir/libghemical.mo; \ echo "installing ./$lang.gmo as" \ "$dir/libghemical.mo"; \ fi; \ if test -r $lang.gmo.m; then \ /usr/bin/install -c -m 644 $lang.gmo.m $dir/libghemical.mo.m; \ echo "installing $lang.gmo.m as $dir/libghemical.mo.m"; \ else \ if test -r ./$lang.gmo.m ; then \ /usr/bin/install -c -m 644 ./$lang.gmo.m \ $dir/libghemical.mo.m; \ echo "installing ./$lang.gmo.m as" \ "$dir/libghemical.mo.m"; \ else \ true; \ fi; \ fi; \ done installing de.gmo as /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/locale/de/LC_MESSAGES/libghemical.mo installing fi.gmo as /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/locale/fi/LC_MESSAGES/libghemical.mo installing mk.gmo as /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/locale/mk/LC_MESSAGES/libghemical.mo installing pt_BR.gmo as /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/locale/pt_BR/LC_MESSAGES/libghemical.mo installing ru.gmo as /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/locale/ru/LC_MESSAGES/libghemical.mo installing sq.gmo as /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/locale/sq/LC_MESSAGES/libghemical.mo make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0/po' make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0' make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 libghemical.pc '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig' make[3]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' dh_install make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' dh_installdocs dh_installchangelogs dh_lintian dh_perl dh_link dh_strip_nondeterminism Normalized debian/libghemical-data/usr/share/locale/sq/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/ru/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/fi/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/mk/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/pt_BR/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/de/LC_MESSAGES/libghemical.mo dh_compress dh_fixperms dh_missing dh_missing: warning: usr/lib/aarch64-linux-gnu/libghemical.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libghemical-data (2), libghemical-dev (4), libghemical5t64 (2) * dh_installdocs: libghemical-data (0), libghemical-dev (0), libghemical5t64 (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.md.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "aarch64-linux-gnu", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: symbol _ZN2sc22SCElementScalarProduct6resultEv used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN2sc12OneBodyIntOpC1ERKNS_3RefINS_10OneBodyIntEEE used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZTIN2sc12WavefunctionE used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN2sc8MaterialC1ERKNS_3RefINS_6KeyValEEE used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN2sc15RefSymmSCMatrixC1ERKNS_14RefSCDimensionERKNS_3RefINS_11SCMatrixKitEEE used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN2sc15RefSymmSCMatrixD1Ev used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN2sc16MolecularFormulaD1Ev used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZTIN2sc8RefCountE used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZNK2sc16MolecularFormula7formulaEv used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN2sc13ConnollyShapeC1ERKNS_3RefINS_6KeyValEEE used by debian/libghemical5t64/usr/lib/aarch64-linux-gnu/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: 85 other similar warnings have been skipped (use -v to see them all) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libghemical5t64-dbgsym' in '../libghemical5t64-dbgsym_3.0.0-4.4_arm64.deb'. dpkg-deb: building package 'libghemical5t64' in '../libghemical5t64_3.0.0-4.4_arm64.deb'. dpkg-deb: building package 'libghemical-dev' in '../libghemical-dev_3.0.0-4.4_arm64.deb'. dpkg-deb: building package 'libghemical-data' in '../libghemical-data_3.0.0-4.4_all.deb'. dpkg-genbuildinfo --build=binary -O../libghemical_3.0.0-4.4_arm64.buildinfo dpkg-genchanges --build=binary -O../libghemical_3.0.0-4.4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/145008 and its subdirectories I: Current time: Thu May 2 14:35:46 -12 2024 I: pbuilder-time-stamp: 1714703746 Fri May 3 02:35:48 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Fri May 3 02:35:48 UTC 2024 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Fri May 3 02:37:35 UTC 2024 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Fri May 3 02:37:36 UTC 2024 I: libghemical_3.0.0-4.4_arm64.changes: Format: 1.8 Date: Wed, 28 Feb 2024 12:15:21 +0000 Source: libghemical Binary: libghemical-data libghemical-dev libghemical5t64 libghemical5t64-dbgsym Architecture: all arm64 Version: 3.0.0-4.4 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Benjamin Drung Description: libghemical-data - Molecular Modelling Library (data files) libghemical-dev - Molecular Modelling Library (development files) libghemical5t64 - Molecular Modelling Library Closes: 1062311 Changes: libghemical (3.0.0-4.4) unstable; urgency=medium . * Non-maintainer upload. * Rename libraries for 64-bit time_t transition. Closes: #1062311 Checksums-Sha1: cca69cc48c7854af4d62addf772a8b00887491a0 106620 libghemical-data_3.0.0-4.4_all.deb 8ee12521d65f9a24173b558c6e2bcbb78cd52163 424932 libghemical-dev_3.0.0-4.4_arm64.deb b689e7db8bbf7f8630cbbea5794f250bf59acd5f 3267512 libghemical5t64-dbgsym_3.0.0-4.4_arm64.deb 65b52bc8aefdcf779de15c7250a5b886cf8b54d7 339220 libghemical5t64_3.0.0-4.4_arm64.deb 7035002cd525bb9571a65ada6b586d7544ef1519 11417 libghemical_3.0.0-4.4_arm64.buildinfo Checksums-Sha256: d6e1a83349142ed42322051025f67aa7ff4e4e27e0af66319f3a3ccaec41554c 106620 libghemical-data_3.0.0-4.4_all.deb daba96f09e1fe01e54baf84ce9d7e8d22de9b7ebfe4b273cb875c2842f441760 424932 libghemical-dev_3.0.0-4.4_arm64.deb 8c59b4eecaed6b3e8b7a939f41019db308b0840249ebd29a14218bb66e911507 3267512 libghemical5t64-dbgsym_3.0.0-4.4_arm64.deb 64ad7c5fd023465a2f538a00d507dc1c102adb51e1879e4a51eaf283ae95a45d 339220 libghemical5t64_3.0.0-4.4_arm64.deb ff6d84a1eb64e25211a9db5a99b2bf04916b84d3d32df3e2a83823261f90f5ca 11417 libghemical_3.0.0-4.4_arm64.buildinfo Files: 9613d18030907f328e7bb52c51a85700 106620 science optional libghemical-data_3.0.0-4.4_all.deb 813953e60258ea6f064d6ab5fefa3263 424932 libdevel optional libghemical-dev_3.0.0-4.4_arm64.deb 9fa125eb8c245c7f96a9418a161a3159 3267512 debug optional libghemical5t64-dbgsym_3.0.0-4.4_arm64.deb 54ca3ae039ca21d443c589b1c3776bd6 339220 libs optional libghemical5t64_3.0.0-4.4_arm64.deb 0eba3b163755d2fb4d47a242dc31e771 11417 science optional libghemical_3.0.0-4.4_arm64.buildinfo Fri May 3 02:37:37 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_20-16690.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.PTYd7oro/libghemical_3.0.0-4.4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.PTYd7oro/libghemical_3.0.0-4.4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.PTYd7oro/libghemical_3.0.0-4.4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.PTYd7oro/b1/libghemical_3.0.0-4.4_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.PTYd7oro/b2/libghemical_3.0.0-4.4_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.401s) 0.401s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.060s) 0.060s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 743ms CPU time consumed: 744ms Fri May 3 02:37:38 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Fri May 3 02:37:38 UTC 2024 I: libghemical from unstable built successfully and reproducibly on arm64. Fri May 3 02:37:39 UTC 2024 I: Submitting .buildinfo files to external archives: Fri May 3 02:37:39 UTC 2024 I: Submitting 16K b1/libghemical_3.0.0-4.4_arm64.buildinfo.asc Fri May 3 02:37:41 UTC 2024 I: Submitting 16K b2/libghemical_3.0.0-4.4_arm64.buildinfo.asc Fri May 3 02:37:43 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri May 3 02:37:43 UTC 2024 I: Done submitting .buildinfo files. Fri May 3 02:37:43 UTC 2024 I: Removing signed libghemical_3.0.0-4.4_arm64.buildinfo.asc files: removed './b1/libghemical_3.0.0-4.4_arm64.buildinfo.asc' removed './b2/libghemical_3.0.0-4.4_arm64.buildinfo.asc'