Thu Nov 14 20:09:04 UTC 2024 I: starting to build heudiconv/unstable/arm64 on jenkins on '2024-11-14 20:09' Thu Nov 14 20:09:04 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_1/46360/console.log Thu Nov 14 20:09:04 UTC 2024 I: Downloading source for unstable/heudiconv=1.3.2-1 --2024-11-14 20:09:04-- http://deb.debian.org/debian/pool/main/h/heudiconv/heudiconv_1.3.2-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2207 (2.2K) [text/prs.lines.tag] Saving to: ‘heudiconv_1.3.2-1.dsc’ 0K .. 100% 382M=0s 2024-11-14 20:09:04 (382 MB/s) - ‘heudiconv_1.3.2-1.dsc’ saved [2207/2207] Thu Nov 14 20:09:04 UTC 2024 I: heudiconv_1.3.2-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: heudiconv Binary: heudiconv Architecture: all Version: 1.3.2-1 Maintainer: Debian Med Packaging Team Uploaders: Michael Hanke , Yaroslav Halchenko Homepage: https://github.com/nipy/heudiconv Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/heudiconv Vcs-Git: https://salsa.debian.org/med-team/heudiconv.git Build-Depends: debhelper-compat (= 13), dh-sequence-python3, dcm2niix, help2man, python3-all, python3-boto3, python3-datalad, python3-dcmstack, python3-dicom, python3-duecredit, python3-filelock, python3-inotify, python3-nipype, python3-pytest, python3-setuptools, python3-tinydb Package-List: heudiconv deb science optional arch=all Checksums-Sha1: f2cf6aad1733b576d28818b922180093f3426410 9171517 heudiconv_1.3.2.orig.tar.gz fd8c6fa5f781505eabbd4ccabbd658341509f904 4524 heudiconv_1.3.2-1.debian.tar.xz Checksums-Sha256: f957154dd74c655972849064d57d6c2b8b122f9fd22a354cd712dd3ad0b321a4 9171517 heudiconv_1.3.2.orig.tar.gz 78f05a6fc755c82564175962cabf3325f696befb15264cd060891f038e5863f5 4524 heudiconv_1.3.2-1.debian.tar.xz Files: 55197ac952412af3d78319a74d3414ef 9171517 heudiconv_1.3.2.orig.tar.gz c80e6f569a2968f5c7ab7a071feb6c00 4524 heudiconv_1.3.2-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEExbkF8OjZ/ZZo/zZvot4jUGLaM/oFAmc073cACgkQot4jUGLa M/rS5A//RunBI7A2DugCF+JzL3pRdqXq9HaH1KPnN1eVxv1GiuIZU6MPEi2/vDo4 Tz/rvAi6PqqtuJUk3cVhzE6XMzMywEq2/lLln4W7+efxUKvNSgdN1H1/4jy7CcYC wHC58Uc6C+l4Nw3Ow1diAXeKX5Ebko6LA1aCRtl5HMZbX3IVIgNQ3rP9jWjy3dcF A5XEnXV+dFNONRfc78TaM6mDZBlPAvdF+aG+u0z5epcW0O47TYSk402Q/V1vtf8N iX/6e5zHyHwhsVY/53RGI8nTiZElEdACI0F+8wGP4HunQEJuZAXa24dUBPVL0Ay8 q4+UoWp/xPhaLt+1JmctdcxeAjpsodItbFOo8vIvhG3TD0NK9RYC4LFkIq/O4GHD FWFq+0Z6qescrAbVfe0inI51/2PuuDIrT40/2jmYefS56eSJsxzPnxY/YSj8pFns cdcEti7zPEyVyeXvnezlUQeCnsQ06cGxUJ530r+olcG3E8e3FkfU+JC2rTJKM6Vq y/F+Ow31vpGigZWtT0i3ibKrPyAQNqTlt5k2EgnPgYzQBPgsKtGfQKKIi1ykUDgr hjL6rNQ++lSAisjBOnsd5J5DbG9xsOsVnwjq8PQJdPOmjMeSsfCm8hY3qf80+D2E 3632FThatzwhU7pLO3sc22LC+XIjevyhglfWmADKFmHLK9yDHbg= =ndUz -----END PGP SIGNATURE----- Thu Nov 14 20:09:04 UTC 2024 I: Checking whether the package is not for us Thu Nov 14 20:09:04 UTC 2024 I: Starting 1st build on remote node codethink01-arm64.debian.net. Thu Nov 14 20:09:04 UTC 2024 I: Preparing to do remote build '1' on codethink01-arm64.debian.net. Thu Nov 14 20:13:40 UTC 2024 I: Deleting $TMPDIR on codethink01-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 17 14:32:06 -12 2025 I: pbuilder-time-stamp: 1766025126 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [heudiconv_1.3.2-1.dsc] I: copying [./heudiconv_1.3.2.orig.tar.gz] I: copying [./heudiconv_1.3.2-1.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Nov 13 18:27:03 2024 gpgv: using RSA key C5B905F0E8D9FD9668FF366FA2DE235062DA33FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./heudiconv_1.3.2-1.dsc: no acceptable signature found dpkg-source: info: extracting heudiconv in heudiconv-1.3.2 dpkg-source: info: unpacking heudiconv_1.3.2.orig.tar.gz dpkg-source: info: unpacking heudiconv_1.3.2-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying deb-no-demand-on-etelemetry I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/765930/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='a9684257819742729741e8aaf9d79d2c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='765930' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.DIZ4mK7E/pbuilderrc_Mb6l --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.DIZ4mK7E/b1 --logfile b1/build.log heudiconv_1.3.2-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink01-arm64 6.1.0-27-cloud-arm64 #1 SMP Debian 6.1.115-1 (2024-11-01) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/765930/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, dcm2niix, help2man, python3-all, python3-boto3, python3-datalad, python3-dcmstack, python3-dicom, python3-duecredit, python3-filelock, python3-inotify, python3-nipype, python3-pytest, python3-setuptools, python3-tinydb dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20089 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on dcm2niix; however: Package dcm2niix is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-boto3; however: Package python3-boto3 is not installed. pbuilder-satisfydepends-dummy depends on python3-datalad; however: Package python3-datalad is not installed. pbuilder-satisfydepends-dummy depends on python3-dcmstack; however: Package python3-dcmstack is not installed. pbuilder-satisfydepends-dummy depends on python3-dicom; however: Package python3-dicom is not installed. pbuilder-satisfydepends-dummy depends on python3-duecredit; however: Package python3-duecredit is not installed. pbuilder-satisfydepends-dummy depends on python3-filelock; however: Package python3-filelock is not installed. pbuilder-satisfydepends-dummy depends on python3-inotify; however: Package python3-inotify is not installed. pbuilder-satisfydepends-dummy depends on python3-nipype; however: Package python3-nipype is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-tinydb; however: Package python3-tinydb is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: 7zip{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} curl{a} dcm2niix{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} git{a} git-annex{a} git-man{a} groff-base{a} help2man{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcbor0.10{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} liberror-perl{a} libexpat1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} liblocale-gettext-perl{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnsl2{a} libnuma1{a} libopenjp2-7{a} libpipeline1{a} libpopt0{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libturbojpeg0{a} libuchardet0{a} libxml2{a} libxslt1.1{a} libyaml-0-2{a} libyaml-cpp0.8{a} lsb-release{a} m4{a} man-db{a} media-types{a} netbase{a} openssh-client{a} openssl{a} patool{a} po-debconf{a} python3{a} python3-all{a} python3-annexremote{a} python3-autocommand{a} python3-bcrypt{a} python3-boto3{a} python3-botocore{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-ci-info{a} python3-citeproc{a} python3-click{a} python3-colorama{a} python3-cryptography{a} python3-datalad{a} python3-dateutil{a} python3-dcmstack{a} python3-decorator{a} python3-deepdiff{a} python3-dipy{a} python3-dipy-lib{a} python3-distro{a} python3-duecredit{a} python3-etelemetry{a} python3-fasteners{a} python3-filelock{a} python3-gitlab{a} python3-h5py{a} python3-h5py-serial{a} python3-humanize{a} python3-idna{a} python3-importlib-metadata{a} python3-inflect{a} python3-iniconfig{a} python3-inotify{a} python3-iso8601{a} python3-jaraco.classes{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jeepney{a} python3-jmespath{a} python3-jsonpickle{a} python3-keyring{a} python3-keyrings.alt{a} python3-looseversion{a} python3-lxml{a} python3-minimal{a} python3-monotonic{a} python3-more-itertools{a} python3-msgpack{a} python3-networkx{a} python3-nibabel{a} python3-nipype{a} python3-numpy{a} python3-ordered-set{a} python3-packaging{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-prov{a} python3-psutil{a} python3-puremagic{a} python3-pycryptodome{a} python3-pydicom{a} python3-pyparsing{a} python3-pytest{a} python3-rdflib{a} python3-requests{a} python3-requests-toolbelt{a} python3-s3transfer{a} python3-scipy{a} python3-secretstorage{a} python3-setuptools{a} python3-setuptools-scm{a} python3-simplejson{a} python3-six{a} python3-tinydb{a} python3-tqdm{a} python3-traits{a} python3-trx-python{a} python3-typeguard{a} python3-typing-extensions{a} python3-urllib3{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} rsync{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: aria2 bind9-host git-remote-gcrypt gnupg graphviz ipython3 javascript-common krb5-locales less libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lsof mayavi2 nocache pigz publicsuffix python3-bs4 python3-clevercsv python3-cssselect python3-fuse python3-gdal python3-html5lib python3-html5rdf python3-httpretty python3-matplotlib python3-orjson python3-pandas python3-pil python3-pydot python3-pydotplus python3-pygments python3-pygraphviz python3-pyperclip python3-sklearn python3-tables python3-vcr python3-vtk9 python3-xvfbwrapper python3-yaml xauth 0 packages upgraded, 191 newly installed, 0 to remove and 0 not upgraded. Need to get 136 MB of archives. After unpacking 707 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-7+b1 [15.2 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.7-3 [808 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.7-3 [1940 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.12.7-1 [26.8 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024b-3 [255 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 13 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-5 [69.3 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-5 [159 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.7-3 [1902 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.7-3 [671 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.12.7-1 [9708 B] Get: 23 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.12.7-1 [27.8 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.0-2 [850 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.0-2 [1838 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libpopt0 arm64 1.19+dfsg-2 [42.8 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 rsync arm64 3.3.0-1+b1 [403 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.3.2-2 [1347 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20240203 [158 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240808-1 [89.2 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 libcbor0.10 arm64 0.10.2-2 [27.4 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 libfido2-1 arm64 1.15.0-1+b1 [74.3 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 openssh-client arm64 1:9.9p1-3 [928 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 7zip arm64 24.08+dfsg-1 [1412 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.4.0-1+b1 [59.6 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.6.0-1 [112 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.6.0-1 [18.5 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.11.0-1 [331 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 curl arm64 8.11.0-1 [248 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 libopenjp2-7 arm64 2.5.0-2+b4 [185 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 libturbojpeg0 arm64 1:2.1.5-3+b1 [211 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libyaml-cpp0.8 arm64 0.8.0+dfsg-6+b2 [119 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 dcm2niix arm64 1.0.20240202-1 [257 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-8 [517 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 73 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.20 [915 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 python3-importlib-metadata all 8.5.0-1 [21.0 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 89 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 90 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 75.2.0-1 [731 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20241024 [109 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 liberror-perl all 0.17029-2 [29.0 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 git-man all 1:2.45.2-1.2 [2159 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 git arm64 1:2.45.2-1.2 [8555 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 libnuma1 arm64 2.0.18-1+b1 [21.8 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-1+b2 [49.3 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 git-annex arm64 10.20241031-1 [16.6 MB] Get: 100 http://deb.debian.org/debian unstable/main arm64 help2man arm64 1.49.3+b1 [198 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1+b1 [22.5 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.0-3+b1 [98.9 kB] Get: 103 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.11.0-1 [322 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.2.0-8 [361 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1+b1 [8044 B] Get: 106 http://deb.debian.org/debian unstable/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-4 [1050 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-4 [60.9 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 110 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.0-3+b1 [1812 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1+b2 [25.6 kB] Get: 113 http://deb.debian.org/debian unstable/main arm64 liblzf1 arm64 3.6-4+b2 [10.0 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.0-2 [1922 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 libxslt1.1 arm64 1.1.35-1.1+b1 [222 kB] Get: 116 http://deb.debian.org/debian unstable/main arm64 lsb-release all 12.1-1 [5912 B] Get: 117 http://deb.debian.org/debian unstable/main arm64 patool all 2.0.0-2 [39.3 kB] Get: 118 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.0-2 [730 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.12.7-1 [1052 B] Get: 120 http://deb.debian.org/debian unstable/main arm64 python3-annexremote all 1.6.4-2 [15.9 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 python3-bcrypt arm64 4.2.0-2 [188 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 123 http://deb.debian.org/debian unstable/main arm64 python3-jmespath all 1.0.1-1 [21.1 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 126 http://deb.debian.org/debian unstable/main arm64 python3-charset-normalizer arm64 3.4.0-1+b1 [129 kB] Get: 127 http://deb.debian.org/debian unstable/main arm64 python3-idna all 3.8-2 [41.6 kB] Get: 128 http://deb.debian.org/debian unstable/main arm64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 129 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 130 http://deb.debian.org/debian unstable/main arm64 python3-six all 1.16.0-7 [16.4 kB] Get: 131 http://deb.debian.org/debian unstable/main arm64 python3-botocore all 1.34.46+repack-1 [6464 kB] Get: 132 http://deb.debian.org/debian unstable/main arm64 python3-s3transfer all 0.10.1-1 [55.6 kB] Get: 133 http://deb.debian.org/debian unstable/main arm64 python3-boto3 all 1.34.46+dfsg-1 [269 kB] Get: 134 http://deb.debian.org/debian unstable/main arm64 python3-cffi-backend arm64 1.17.1-2+b1 [94.8 kB] Get: 135 http://deb.debian.org/debian unstable/main arm64 python3-ci-info all 0.3.0-1 [7584 B] Get: 136 http://deb.debian.org/debian unstable/main arm64 python3-lxml arm64 5.3.0-1+b1 [1433 kB] Get: 137 http://deb.debian.org/debian unstable/main arm64 python3-citeproc all 0.6.0-3 [96.7 kB] Get: 138 http://deb.debian.org/debian unstable/main arm64 python3-colorama all 0.4.6-4 [36.2 kB] Get: 139 http://deb.debian.org/debian unstable/main arm64 python3-click all 8.1.7-2 [94.3 kB] Get: 140 http://deb.debian.org/debian unstable/main arm64 python3-cryptography arm64 43.0.0-1 [835 kB] Get: 141 http://deb.debian.org/debian unstable/main arm64 python3-distro all 1.9.0-1 [20.3 kB] Get: 142 http://deb.debian.org/debian unstable/main arm64 python3-monotonic all 1.6-2 [5728 B] Get: 143 http://deb.debian.org/debian unstable/main arm64 python3-fasteners all 0.18-2 [14.0 kB] Get: 144 http://deb.debian.org/debian unstable/main arm64 python3-requests-toolbelt all 1.0.0-3 [40.2 kB] Get: 145 http://deb.debian.org/debian unstable/main arm64 python3-gitlab all 1:4.3.0-1 [72.8 kB] Get: 146 http://deb.debian.org/debian unstable/main arm64 python3-humanize all 4.11.0-1 [52.7 kB] Get: 147 http://deb.debian.org/debian unstable/main arm64 python3-iso8601 all 2.1.0-2 [12.1 kB] Get: 148 http://deb.debian.org/debian unstable/main arm64 python3-jeepney all 0.8.0-4 [32.6 kB] Get: 149 http://deb.debian.org/debian unstable/main arm64 python3-secretstorage all 3.3.3-3 [16.1 kB] Get: 150 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.classes all 3.4.0-1 [7728 B] Get: 151 http://deb.debian.org/debian unstable/main arm64 python3-keyring all 25.4.1-1 [54.6 kB] Get: 152 http://deb.debian.org/debian unstable/main arm64 python3-pycryptodome arm64 3.20.0+dfsg-3 [1073 kB] Get: 153 http://deb.debian.org/debian unstable/main arm64 python3-keyrings.alt all 5.0.2-1 [17.7 kB] Get: 154 http://deb.debian.org/debian unstable/main arm64 python3-msgpack arm64 1.0.3-3+b3 [77.4 kB] Get: 155 http://deb.debian.org/debian unstable/main arm64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 156 http://deb.debian.org/debian unstable/main arm64 python3-tqdm all 4.67.0-1 [90.2 kB] Get: 157 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 24.1-1 [45.8 kB] Get: 158 http://deb.debian.org/debian unstable/main arm64 python3-datalad all 1.1.3-2 [890 kB] Get: 159 http://deb.debian.org/debian unstable/main arm64 python3-pydicom all 2.4.3-1 [1120 kB] Get: 160 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:1.26.4+ds-11 [3351 kB] Get: 161 http://deb.debian.org/debian unstable/main arm64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 162 http://deb.debian.org/debian unstable/main arm64 python3-scipy arm64 1.13.1-5 [15.4 MB] Get: 163 http://deb.debian.org/debian unstable/main arm64 python3-nibabel all 5.2.1-2 [2659 kB] Get: 164 http://deb.debian.org/debian unstable/main arm64 python3-dcmstack all 0.9-3 [78.2 kB] Get: 165 http://deb.debian.org/debian unstable/main arm64 python3-jsonpickle all 3.4.2+dfsg-1 [47.8 kB] Get: 166 http://deb.debian.org/debian unstable/main arm64 python3-ordered-set all 4.1.0-1 [9628 B] Get: 167 http://deb.debian.org/debian unstable/main arm64 python3-deepdiff all 6.7.1-2 [65.6 kB] Get: 168 http://deb.debian.org/debian unstable/main arm64 python3-h5py-serial arm64 3.11.0-8 [908 kB] Get: 169 http://deb.debian.org/debian unstable/main arm64 python3-h5py all 3.11.0-8 [14.9 kB] Get: 170 http://deb.debian.org/debian unstable/main arm64 python3-setuptools-scm all 8.1.0-1 [40.5 kB] Get: 171 http://deb.debian.org/debian unstable/main arm64 python3-trx-python all 0.3-1 [40.2 kB] Get: 172 http://deb.debian.org/debian unstable/main arm64 python3-dipy-lib arm64 1.9.0-8 [1976 kB] Get: 173 http://deb.debian.org/debian unstable/main arm64 python3-dipy all 1.9.0-8 [3485 kB] Get: 174 http://deb.debian.org/debian unstable/main arm64 python3-looseversion all 1.3.0-3 [8964 B] Get: 175 http://deb.debian.org/debian unstable/main arm64 python3-duecredit all 0.10.2-2 [70.6 kB] Get: 176 http://deb.debian.org/debian unstable/main arm64 python3-etelemetry all 0.3.1-1 [7244 B] Get: 177 http://deb.debian.org/debian unstable/main arm64 python3-filelock all 3.16.1-1 [12.6 kB] Get: 178 http://deb.debian.org/debian unstable/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 179 http://deb.debian.org/debian unstable/main arm64 python3-inotify all 0.2.10-5 [10.5 kB] Get: 180 http://deb.debian.org/debian unstable/main arm64 python3-networkx all 3.2.1-4 [14.2 MB] Get: 181 http://deb.debian.org/debian unstable/main arm64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 182 http://deb.debian.org/debian unstable/main arm64 python3-rdflib all 7.1.1-2 [472 kB] Get: 183 http://deb.debian.org/debian unstable/main arm64 python3-prov all 2.0.1-1 [95.1 kB] Get: 184 http://deb.debian.org/debian unstable/main arm64 python3-puremagic all 1.28-1 [39.8 kB] Get: 185 http://deb.debian.org/debian unstable/main arm64 python3-simplejson arm64 3.19.3-1+b1 [60.4 kB] Get: 186 http://deb.debian.org/debian unstable/main arm64 python3-traits arm64 6.4.3-2+b1 [4812 kB] Get: 187 http://deb.debian.org/debian unstable/main arm64 python3-psutil arm64 5.9.8-2+b1 [226 kB] Get: 188 http://deb.debian.org/debian unstable/main arm64 python3-nipype all 1.9.0-1 [1861 kB] Get: 189 http://deb.debian.org/debian unstable/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 190 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.3.3-1 [249 kB] Get: 191 http://deb.debian.org/debian unstable/main arm64 python3-tinydb all 3.15.2-4 [20.8 kB] Fetched 136 MB in 3s (53.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20089 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-7+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package libpython3.12-minimal:arm64. Preparing to unpack .../libpython3.12-minimal_3.12.7-3_arm64.deb ... Unpacking libpython3.12-minimal:arm64 (3.12.7-3) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.6.4-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_arm64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:arm64 (3.12.7-3) ... Setting up libexpat1:arm64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20424 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_arm64.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:arm64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:arm64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_arm64.deb ... Unpacking libnsl2:arm64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../14-libreadline8t64_8.2-5_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:arm64. 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21486 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.7-1_arm64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../001-libpython3.13-minimal_3.13.0-2_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.0-2) ... Selecting previously unselected package python3.13-minimal. 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Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:arm64 (1.1.0-2+b6) ... Setting up libedit2:arm64 (3.1-20240808-1) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:arm64 (1.64.0-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up 7zip (24.08+dfsg-1) ... Setting up libcom-err2:arm64 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libturbojpeg0:arm64 (1:2.1.5-3+b1) ... Setting up libaec0:arm64 (1.1.3-1+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up libkrb5support0:arm64 (1.21.3-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Dec 18 02:33:11 UTC 2025. Universal Time is now: Thu Dec 18 02:33:11 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up liberror-perl (0.17029-2) ... Setting up libpython3.13-minimal:arm64 (3.13.0-2) ... Setting up autotools-dev (20220109.1) ... Setting up libblas3:arm64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up liblzf1:arm64 (3.6-4+b2) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:arm64 (1.21.3-3) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:arm64 (14.2.0-8) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:arm64 (1.4.0-1+b1) ... Setting up libnuma1:arm64 (2.0.18-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libopenjp2-7:arm64 (2.5.0-2+b4) ... Setting up python3.13-minimal (3.13.0-2) ... Setting up git-man (1:2.45.2-1.2) ... Setting up netbase (6.4) ... Setting up libngtcp2-16:arm64 (1.6.0-1) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up lsb-release (12.1-1) ... Setting up libfido2-1:arm64 (1.15.0-1+b1) ... Setting up openssl (3.3.2-2) ... Setting up readline-common (8.2-5) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.6.0-1) ... Setting up libsz2:arm64 (1.1.3-1+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libpopt0:arm64 (1.19+dfsg-2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:arm64 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up dcm2niix (1.0.20240202-1) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3+b1) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up libreadline8t64:arm64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libxslt1.1:arm64 (1.1.35-1.1+b1) ... Setting up libpython3.13-stdlib:arm64 (3.13.0-2) ... Setting up rsync (3.3.0-1+b1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1+b2) ... Setting up libcurl4t64:arm64 (8.11.0-1) ... Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Setting up python3.13 (3.13.0-2) ... Setting up openssh-client (1:9.9p1-3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libcurl3t64-gnutls:arm64 (8.11.0-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up git (1:2.45.2-1.2) ... Setting up libnsl2:arm64 (1.3.0-3+b3) ... Setting up curl (8.11.0-1) ... Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-4) ... Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-4) ... Setting up libpython3.12-stdlib:arm64 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up git-annex (10.20241031-1) ... Setting up libpython3-stdlib:arm64 (3.12.7-1) ... Setting up python3 (3.12.7-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-psutil (5.9.8-2+b1) ... Setting up python3-monotonic (1.6-2) ... Setting up python3-six (1.16.0-7) ... Setting up python3-simplejson (3.19.3-1+b1) ... Setting up python3-puremagic (1.28-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.1-1) ... Setting up python3-iso8601 (2.1.0-2) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-jmespath (1.0.1-1) ... Setting up python3-idna (3.8-2) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-fasteners (0.18-2) ... Setting up python3-jeepney (0.8.0-4) ... Setting up python3-ci-info (0.3.0-1) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-inotify (0.2.10-5) ... Setting up python3-looseversion (1.3.0-3) ... Setting up python3-lxml:arm64 (5.3.0-1+b1) ... Setting up python3-rdflib (7.1.1-2) ... Setting up python3-pydicom (2.4.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-msgpack (1.0.3-3+b3) ... Setting up python3-cffi-backend:arm64 (1.17.1-2+b1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-filelock (3.16.1-1) ... Setting up python3-jsonpickle (3.4.2+dfsg-1) ... Setting up python3-jaraco.classes (3.4.0-1) ... Setting up patool (2.0.0-2) ... Setting up python3-annexremote (1.6.4-2) ... Setting up python3-importlib-metadata (8.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-distro (1.9.0-1) ... Setting up python3-traits (6.4.3-2+b1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-colorama (0.4.6-4) ... Setting up python3-citeproc (0.6.0-3) ... Setting up python3-charset-normalizer (3.4.0-1+b1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-pycryptodome (3.20.0+dfsg-3) ... Setting up python3-bcrypt (4.2.0-2) ... Setting up python3-tqdm (4.67.0-1) ... Setting up python3-tinydb (3.15.2-4) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.7-1) ... Setting up python3-ordered-set (4.1.0-1) ... Setting up python3-click (8.1.7-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-cryptography (43.0.0-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-networkx (3.2.1-4) ... Setting up python3-setuptools-scm (8.1.0-1) ... Setting up python3-prov (2.0.1-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-secretstorage (3.3.3-3) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up python3-keyring (25.4.1-1) ... Setting up python3-humanize (4.11.0-1) ... Setting up dh-python (6.20241024) ... Setting up python3-deepdiff (6.7.1-2) ... Setting up python3-scipy (1.13.1-5) ... Setting up python3-requests-toolbelt (1.0.0-3) ... Setting up python3-duecredit (0.10.2-2) ... Setting up python3-h5py-serial (3.11.0-8) ... Setting up python3-etelemetry (0.3.1-1) ... Setting up python3-dipy-lib:arm64 (1.9.0-8) ... Setting up python3-nibabel (5.2.1-2) ... Setting up python3-botocore (1.34.46+repack-1) ... Setting up python3-h5py (3.11.0-8) ... Setting up python3-keyrings.alt (5.0.2-1) ... Setting up python3-gitlab (1:4.3.0-1) ... Setting up python3-trx-python (0.3-1) ... Setting up python3-s3transfer (0.10.1-1) ... Setting up python3-dipy (1.9.0-8) ... Setting up python3-dcmstack (0.9-3) ... Setting up python3-boto3 (1.34.46+dfsg-1) ... Setting up python3-nipype (1.9.0-1) ... Setting up python3-datalad (1.1.3-2) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/heudiconv-1.3.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../heudiconv_1.3.2-1_source.changes dpkg-buildpackage: info: source package heudiconv dpkg-buildpackage: info: source version 1.3.2-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Yaroslav Halchenko dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p "3.13 3.12" I: pybuild base:311: python3.13 setup.py clean running clean removing '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/heudiconv.substvars debian/files rm -fr -- debian/heudiconv/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules execute_after_dh_clean make[1]: Entering directory '/build/reproducible-path/heudiconv-1.3.2' # Ahhhhhhh! rm -rf .pybuild build .pytest_cache/ rm -rf heudiconv.egg-info/ make[1]: Leaving directory '/build/reproducible-path/heudiconv-1.3.2' debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p "3.13 3.12" I: pybuild base:311: python3.13 setup.py config running config I: pybuild base:311: python3.12 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p "3.13 3.12" I: pybuild base:311: /usr/bin/python3.13 setup.py build running build running build_py creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/info.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/utils.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/queue.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/parser.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/main.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/due.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/dicoms.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/convert.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/bids.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/_version.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv copying heudiconv/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/utils.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_utils.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_tarballs.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_regression.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_queue.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_monitor.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_main.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_heuristics.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_dicoms.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_convert.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_bids.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_archives.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/conftest.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/anonymize_script.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests copying heudiconv/tests/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/uc_bids.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/test_reproin.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/test_b0dwi_for_fmap.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/studyforrest_phase2.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/reproin.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/multires_7Tbold.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/example.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/convertall_custom.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/convertall.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/cmrr_heuristic.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_with_ses.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_PhoenixReport.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_ME.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/banda-bids.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/heuristics creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/external copying heudiconv/external/dlad.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/external copying heudiconv/external/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/external creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/cli copying heudiconv/cli/run.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/cli copying heudiconv/cli/monitor.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/cli copying heudiconv/cli/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/cli creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/external/tests copying heudiconv/external/tests/test_dlad.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/external/tests copying heudiconv/external/tests/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/external/tests copying heudiconv/py.typed -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/phantom.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/axasc35.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/MRI_102TD_PHA_S.MR.Chen_Matthews_1.3.1.2022.11.16.15.50.20.357.31204541.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00003.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00002.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00001.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/b0dwiForFmap creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/01-fmap_acq-3mm copying heudiconv/tests/data/01-fmap_acq-3mm/1.3.12.2.1107.5.2.43.66112.2016101409263663466202201.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/01-fmap_acq-3mm creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/01-anat-scout copying heudiconv/tests/data/01-anat-scout/0001.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/01-anat-scout creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/Phoenix/99+PhoenixDocument copying heudiconv/tests/data/Phoenix/99+PhoenixDocument/99+PhoenixDocument+00001.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/Phoenix/99+PhoenixDocument creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/Phoenix/01+AA copying heudiconv/tests/data/Phoenix/01+AA/01+AA+00001.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data/Phoenix/01+AA copying heudiconv/tests/data/sample_nifti_params.txt -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/sample_nifti.nii.gz -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/data I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/info.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/utils.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/queue.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/parser.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/main.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/due.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/dicoms.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/convert.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/bids.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/_version.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv copying heudiconv/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/utils.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_utils.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_tarballs.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_regression.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_queue.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_monitor.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_main.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_heuristics.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_dicoms.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_convert.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_bids.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/test_archives.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/conftest.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/anonymize_script.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests copying heudiconv/tests/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/uc_bids.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/test_reproin.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/test_b0dwi_for_fmap.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/studyforrest_phase2.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/reproin.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/multires_7Tbold.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/example.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/convertall_custom.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/convertall.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/cmrr_heuristic.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_with_ses.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_PhoenixReport.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/bids_ME.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/banda-bids.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics copying heudiconv/heuristics/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/heuristics creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external copying heudiconv/external/dlad.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external copying heudiconv/external/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/cli copying heudiconv/cli/run.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/cli copying heudiconv/cli/monitor.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/cli copying heudiconv/cli/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/cli creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external/tests copying heudiconv/external/tests/test_dlad.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external/tests copying heudiconv/external/tests/__init__.py -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/external/tests copying heudiconv/py.typed -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/phantom.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/axasc35.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/MRI_102TD_PHA_S.MR.Chen_Matthews_1.3.1.2022.11.16.15.50.20.357.31204541.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00003.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00002.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/b0dwiForFmap copying heudiconv/tests/data/b0dwiForFmap/b0dwi_for_fmap+00001.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/b0dwiForFmap creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/01-fmap_acq-3mm copying heudiconv/tests/data/01-fmap_acq-3mm/1.3.12.2.1107.5.2.43.66112.2016101409263663466202201.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/01-fmap_acq-3mm creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/01-anat-scout copying heudiconv/tests/data/01-anat-scout/0001.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/01-anat-scout creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/Phoenix/99+PhoenixDocument copying heudiconv/tests/data/Phoenix/99+PhoenixDocument/99+PhoenixDocument+00001.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/Phoenix/99+PhoenixDocument creating /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/Phoenix/01+AA copying heudiconv/tests/data/Phoenix/01+AA/01+AA+00001.dcm -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data/Phoenix/01+AA copying heudiconv/tests/data/sample_nifti_params.txt -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data copying heudiconv/tests/data/sample_nifti.nii.gz -> /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/tests/data dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p "3.13 3.12" I: pybuild pybuild:308: cp -a heudiconv/tests /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/ I: pybuild base:311: cd /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build; python3.13 -m pytest heudiconv/tests/test_* -k 'not test_bvals_are_zero and not test_reproin_largely_smoke' ============================= test session starts ============================== platform linux -- Python 3.13.0, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 57 items / 9 errors ==================================== ERRORS ==================================== ______________ ERROR collecting heudiconv/tests/test_archives.py _______________ ImportError while importing test module '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/test_archives.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in from . import multiarray /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in from . import overrides /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in from numpy.core._multiarray_umath import ( E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' During handling of the above exception, another exception occurred: /usr/lib/python3/dist-packages/numpy/__init__.py:130: in from numpy.__config__ import show as show_config /usr/lib/python3/dist-packages/numpy/__config__.py:4: in from numpy.core._multiarray_umath import ( /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in raise ImportError(msg) E ImportError: E E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! E E Importing the numpy C-extensions failed. This error can happen for E many reasons, often due to issues with your setup or how NumPy was E installed. E E We have compiled some common reasons and troubleshooting tips at: E E https://numpy.org/devdocs/user/troubleshooting-importerror.html E E Please note and check the following: E E * The Python version is: Python3.13 from "/usr/bin/python3.13" E * The NumPy version is: "1.26.4" E E and make sure that they are the versions you expect. E Please carefully study the documentation linked above for further help. E E Original error was: No module named 'numpy.core._multiarray_umath' The above exception was the direct cause of the following exception: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) heudiconv/tests/test_archives.py:13: in from ..parser import get_extracted_dicoms heudiconv/parser.py:16: in from .dicoms import group_dicoms_into_seqinfos heudiconv/dicoms.py:48: in import nibabel.nicom.dicomwrappers as dw /usr/lib/python3/dist-packages/nibabel/__init__.py:41: in from . import analyze as ana /usr/lib/python3/dist-packages/nibabel/analyze.py:86: in import numpy as np /usr/lib/python3/dist-packages/numpy/__init__.py:135: in raise ImportError(msg) from e E ImportError: Error importing numpy: you should not try to import numpy from E its source directory; please exit the numpy source tree, and relaunch E your python interpreter from there. ________________ ERROR collecting heudiconv/tests/test_bids.py _________________ ImportError while importing test module '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/test_bids.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in from . import multiarray /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in from . import overrides /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in from numpy.core._multiarray_umath import ( E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' During handling of the above exception, another exception occurred: /usr/lib/python3/dist-packages/numpy/__init__.py:130: in from numpy.__config__ import show as show_config /usr/lib/python3/dist-packages/numpy/__config__.py:4: in from numpy.core._multiarray_umath import ( /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in raise ImportError(msg) E ImportError: E E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! E E Importing the numpy C-extensions failed. This error can happen for E many reasons, often due to issues with your setup or how NumPy was E installed. E E We have compiled some common reasons and troubleshooting tips at: E E https://numpy.org/devdocs/user/troubleshooting-importerror.html E E Please note and check the following: E E * The Python version is: Python3.13 from "/usr/bin/python3.13" E * The NumPy version is: "1.26.4" E E and make sure that they are the versions you expect. E Please carefully study the documentation linked above for further help. E E Original error was: No module named 'numpy.core._multiarray_umath' The above exception was the direct cause of the following exception: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) heudiconv/tests/test_bids.py:19: in import nibabel /usr/lib/python3/dist-packages/nibabel/__init__.py:41: in from . import analyze as ana /usr/lib/python3/dist-packages/nibabel/analyze.py:86: in import numpy as np /usr/lib/python3/dist-packages/numpy/__init__.py:135: in raise ImportError(msg) from e E ImportError: Error importing numpy: you should not try to import numpy from E its source directory; please exit the numpy source tree, and relaunch E your python interpreter from there. _______________ ERROR collecting heudiconv/tests/test_convert.py _______________ ImportError while importing test module '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/test_convert.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in from . import multiarray /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in from . import overrides /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in from numpy.core._multiarray_umath import ( E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' During handling of the above exception, another exception occurred: /usr/lib/python3/dist-packages/numpy/__init__.py:130: in from numpy.__config__ import show as show_config /usr/lib/python3/dist-packages/numpy/__config__.py:4: in from numpy.core._multiarray_umath import ( /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in raise ImportError(msg) E ImportError: E E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! E E Importing the numpy C-extensions failed. This error can happen for E many reasons, often due to issues with your setup or how NumPy was E installed. E E We have compiled some common reasons and troubleshooting tips at: E E https://numpy.org/devdocs/user/troubleshooting-importerror.html E E Please note and check the following: E E * The Python version is: Python3.13 from "/usr/bin/python3.13" E * The NumPy version is: "1.26.4" E E and make sure that they are the versions you expect. E Please carefully study the documentation linked above for further help. E E Original error was: No module named 'numpy.core._multiarray_umath' The above exception was the direct cause of the following exception: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) heudiconv/tests/test_convert.py:12: in from heudiconv.bids import BIDSError heudiconv/bids.py:20: in import numpy as np /usr/lib/python3/dist-packages/numpy/__init__.py:135: in raise ImportError(msg) from e E ImportError: Error importing numpy: you should not try to import numpy from E its source directory; please exit the numpy source tree, and relaunch E your python interpreter from there. _______________ ERROR collecting heudiconv/tests/test_dicoms.py ________________ ImportError while importing test module '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/test_dicoms.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in from . import multiarray /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in from . import overrides /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in from numpy.core._multiarray_umath import ( E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' During handling of the above exception, another exception occurred: /usr/lib/python3/dist-packages/numpy/__init__.py:130: in from numpy.__config__ import show as show_config /usr/lib/python3/dist-packages/numpy/__config__.py:4: in from numpy.core._multiarray_umath import ( /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in raise ImportError(msg) E ImportError: E E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! E E Importing the numpy C-extensions failed. This error can happen for E many reasons, often due to issues with your setup or how NumPy was E installed. E E We have compiled some common reasons and troubleshooting tips at: E E https://numpy.org/devdocs/user/troubleshooting-importerror.html E E Please note and check the following: E E * The Python version is: Python3.13 from "/usr/bin/python3.13" E * The NumPy version is: "1.26.4" E E and make sure that they are the versions you expect. E Please carefully study the documentation linked above for further help. E E Original error was: No module named 'numpy.core._multiarray_umath' The above exception was the direct cause of the following exception: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) heudiconv/tests/test_dicoms.py:12: in from heudiconv.cli.run import main as runner heudiconv/cli/run.py:11: in from ..main import workflow heudiconv/main.py:11: in from .bids import populate_bids_templates, populate_intended_for, tuneup_bids_json_files heudiconv/bids.py:20: in import numpy as np /usr/lib/python3/dist-packages/numpy/__init__.py:135: in raise ImportError(msg) from e E ImportError: Error importing numpy: you should not try to import numpy from E its source directory; please exit the numpy source tree, and relaunch E your python interpreter from there. _____________ ERROR collecting heudiconv/tests/test_heuristics.py ______________ ImportError while importing test module '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/test_heuristics.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in from . import multiarray /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in from . import overrides /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in from numpy.core._multiarray_umath import ( E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' During handling of the above exception, another exception occurred: /usr/lib/python3/dist-packages/numpy/__init__.py:130: in from numpy.__config__ import show as show_config /usr/lib/python3/dist-packages/numpy/__config__.py:4: in from numpy.core._multiarray_umath import ( /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in raise ImportError(msg) E ImportError: E E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! E E Importing the numpy C-extensions failed. This error can happen for E many reasons, often due to issues with your setup or how NumPy was E installed. E E We have compiled some common reasons and troubleshooting tips at: E E https://numpy.org/devdocs/user/troubleshooting-importerror.html E E Please note and check the following: E E * The Python version is: Python3.13 from "/usr/bin/python3.13" E * The NumPy version is: "1.26.4" E E and make sure that they are the versions you expect. E Please carefully study the documentation linked above for further help. E E Original error was: No module named 'numpy.core._multiarray_umath' The above exception was the direct cause of the following exception: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) heudiconv/tests/test_heuristics.py:17: in from heudiconv.cli.run import main as runner heudiconv/cli/run.py:11: in from ..main import workflow heudiconv/main.py:11: in from .bids import populate_bids_templates, populate_intended_for, tuneup_bids_json_files heudiconv/bids.py:20: in import numpy as np /usr/lib/python3/dist-packages/numpy/__init__.py:135: in raise ImportError(msg) from e E ImportError: Error importing numpy: you should not try to import numpy from E its source directory; please exit the numpy source tree, and relaunch E your python interpreter from there. ________________ ERROR collecting heudiconv/tests/test_main.py _________________ ImportError while importing test module '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/test_main.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in from . import multiarray /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in from . import overrides /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in from numpy.core._multiarray_umath import ( E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' During handling of the above exception, another exception occurred: /usr/lib/python3/dist-packages/numpy/__init__.py:130: in from numpy.__config__ import show as show_config /usr/lib/python3/dist-packages/numpy/__config__.py:4: in from numpy.core._multiarray_umath import ( /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in raise ImportError(msg) E ImportError: E E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! E E Importing the numpy C-extensions failed. This error can happen for E many reasons, often due to issues with your setup or how NumPy was E installed. E E We have compiled some common reasons and troubleshooting tips at: E E https://numpy.org/devdocs/user/troubleshooting-importerror.html E E Please note and check the following: E E * The Python version is: Python3.13 from "/usr/bin/python3.13" E * The NumPy version is: "1.26.4" E E and make sure that they are the versions you expect. E Please carefully study the documentation linked above for further help. E E Original error was: No module named 'numpy.core._multiarray_umath' The above exception was the direct cause of the following exception: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) heudiconv/tests/test_main.py:16: in from heudiconv.bids import ( heudiconv/bids.py:20: in import numpy as np /usr/lib/python3/dist-packages/numpy/__init__.py:135: in raise ImportError(msg) from e E ImportError: Error importing numpy: you should not try to import numpy from E its source directory; please exit the numpy source tree, and relaunch E your python interpreter from there. ________________ ERROR collecting heudiconv/tests/test_queue.py ________________ ImportError while importing test module '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/test_queue.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in from . import multiarray /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in from . import overrides /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in from numpy.core._multiarray_umath import ( E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' During handling of the above exception, another exception occurred: /usr/lib/python3/dist-packages/numpy/__init__.py:130: in from numpy.__config__ import show as show_config /usr/lib/python3/dist-packages/numpy/__config__.py:4: in from numpy.core._multiarray_umath import ( /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in raise ImportError(msg) E ImportError: E E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! E E Importing the numpy C-extensions failed. This error can happen for E many reasons, often due to issues with your setup or how NumPy was E installed. E E We have compiled some common reasons and troubleshooting tips at: E E https://numpy.org/devdocs/user/troubleshooting-importerror.html E E Please note and check the following: E E * The Python version is: Python3.13 from "/usr/bin/python3.13" E * The NumPy version is: "1.26.4" E E and make sure that they are the versions you expect. E Please carefully study the documentation linked above for further help. E E Original error was: No module named 'numpy.core._multiarray_umath' The above exception was the direct cause of the following exception: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) heudiconv/tests/test_queue.py:6: in from nipype.utils.filemanip import which /usr/lib/python3/dist-packages/nipype/__init__.py:19: in from .utils.config import NipypeConfig /usr/lib/python3/dist-packages/nipype/utils/config.py:21: in from .misc import str2bool /usr/lib/python3/dist-packages/nipype/utils/misc.py:13: in import numpy as np /usr/lib/python3/dist-packages/numpy/__init__.py:135: in raise ImportError(msg) from e E ImportError: Error importing numpy: you should not try to import numpy from E its source directory; please exit the numpy source tree, and relaunch E your python interpreter from there. _____________ ERROR collecting heudiconv/tests/test_regression.py ______________ ImportError while importing test module '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/test_regression.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in from . import multiarray /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in from . import overrides /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in from numpy.core._multiarray_umath import ( E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' During handling of the above exception, another exception occurred: /usr/lib/python3/dist-packages/numpy/__init__.py:130: in from numpy.__config__ import show as show_config /usr/lib/python3/dist-packages/numpy/__config__.py:4: in from numpy.core._multiarray_umath import ( /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in raise ImportError(msg) E ImportError: E E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! E E Importing the numpy C-extensions failed. This error can happen for E many reasons, often due to issues with your setup or how NumPy was E installed. E E We have compiled some common reasons and troubleshooting tips at: E E https://numpy.org/devdocs/user/troubleshooting-importerror.html E E Please note and check the following: E E * The Python version is: Python3.13 from "/usr/bin/python3.13" E * The NumPy version is: "1.26.4" E E and make sure that they are the versions you expect. E Please carefully study the documentation linked above for further help. E E Original error was: No module named 'numpy.core._multiarray_umath' The above exception was the direct cause of the following exception: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) heudiconv/tests/test_regression.py:14: in from heudiconv.cli.run import main as runner heudiconv/cli/run.py:11: in from ..main import workflow heudiconv/main.py:11: in from .bids import populate_bids_templates, populate_intended_for, tuneup_bids_json_files heudiconv/bids.py:20: in import numpy as np /usr/lib/python3/dist-packages/numpy/__init__.py:135: in raise ImportError(msg) from e E ImportError: Error importing numpy: you should not try to import numpy from E its source directory; please exit the numpy source tree, and relaunch E your python interpreter from there. ______________ ERROR collecting heudiconv/tests/test_tarballs.py _______________ ImportError while importing test module '/build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build/heudiconv/tests/test_tarballs.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: /usr/lib/python3/dist-packages/numpy/core/__init__.py:24: in from . import multiarray /usr/lib/python3/dist-packages/numpy/core/multiarray.py:10: in from . import overrides /usr/lib/python3/dist-packages/numpy/core/overrides.py:8: in from numpy.core._multiarray_umath import ( E ModuleNotFoundError: No module named 'numpy.core._multiarray_umath' During handling of the above exception, another exception occurred: /usr/lib/python3/dist-packages/numpy/__init__.py:130: in from numpy.__config__ import show as show_config /usr/lib/python3/dist-packages/numpy/__config__.py:4: in from numpy.core._multiarray_umath import ( /usr/lib/python3/dist-packages/numpy/core/__init__.py:50: in raise ImportError(msg) E ImportError: E E IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE! E E Importing the numpy C-extensions failed. This error can happen for E many reasons, often due to issues with your setup or how NumPy was E installed. E E We have compiled some common reasons and troubleshooting tips at: E E https://numpy.org/devdocs/user/troubleshooting-importerror.html E E Please note and check the following: E E * The Python version is: Python3.13 from "/usr/bin/python3.13" E * The NumPy version is: "1.26.4" E E and make sure that they are the versions you expect. E Please carefully study the documentation linked above for further help. E E Original error was: No module named 'numpy.core._multiarray_umath' The above exception was the direct cause of the following exception: /usr/lib/python3.13/importlib/__init__.py:88: in import_module return _bootstrap._gcd_import(name[level:], package, level) heudiconv/tests/test_tarballs.py:9: in from heudiconv.dicoms import compress_dicoms heudiconv/dicoms.py:48: in import nibabel.nicom.dicomwrappers as dw /usr/lib/python3/dist-packages/nibabel/__init__.py:41: in from . import analyze as ana /usr/lib/python3/dist-packages/nibabel/analyze.py:86: in import numpy as np /usr/lib/python3/dist-packages/numpy/__init__.py:135: in raise ImportError(msg) from e E ImportError: Error importing numpy: you should not try to import numpy from E its source directory; please exit the numpy source tree, and relaunch E your python interpreter from there. =========================== short test summary info ============================ ERROR heudiconv/tests/test_archives.py ERROR heudiconv/tests/test_bids.py ERROR heudiconv/tests/test_convert.py ERROR heudiconv/tests/test_dicoms.py ERROR heudiconv/tests/test_heuristics.py ERROR heudiconv/tests/test_main.py ERROR heudiconv/tests/test_queue.py ERROR heudiconv/tests/test_regression.py ERROR heudiconv/tests/test_tarballs.py !!!!!!!!!!!!!!!!!!! Interrupted: 9 errors during collection !!!!!!!!!!!!!!!!!!!! ============================== 9 errors in 1.80s =============================== E: pybuild pybuild:389: test: plugin distutils failed with: exit code=2: cd /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.13_heudiconv/build; python3.13 -m pytest heudiconv/tests/test_* -k 'not test_bvals_are_zero and not test_reproin_largely_smoke' I: pybuild pybuild:308: cp -a heudiconv/tests /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build/heudiconv/ I: pybuild base:311: cd /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build; python3.12 -m pytest heudiconv/tests/test_* -k 'not test_bvals_are_zero and not test_reproin_largely_smoke' ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/heudiconv-1.3.2/.pybuild/cpython3_3.12_heudiconv/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 175 items / 5 deselected / 170 selected heudiconv/tests/test_archives.py .......... [ 5%] heudiconv/tests/test_bids.py ..................................s. [ 27%] heudiconv/tests/test_convert.py .......... [ 32%] heudiconv/tests/test_dicoms.py ..........................ss [ 49%] heudiconv/tests/test_heuristics.py ....... [ 53%] heudiconv/tests/test_main.py .............. [ 61%] heudiconv/tests/test_monitor.py ssss [ 64%] heudiconv/tests/test_queue.py ... [ 65%] heudiconv/tests/test_regression.py sss. [ 68%] heudiconv/tests/test_tarballs.py . [ 68%] heudiconv/tests/test_utils.py .......................................... [ 93%] ........... [100%] =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258 /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:258: DeprecationWarning: module 'sre_parse' is deprecated import sre_parse ../../../../../../usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259 /usr/lib/python3/dist-packages/traits/observation/_generated_parser.py:259: DeprecationWarning: module 'sre_constants' is deprecated import sre_constants heudiconv/tests/test_convert.py::test_b0dwi_for_fmap /usr/lib/python3/dist-packages/pydicom/valuerep.py:443: UserWarning: The value length (22) exceeds the maximum length of 16 allowed for VR SH. warnings.warn(msg) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ===== 160 passed, 10 skipped, 5 deselected, 3 warnings in 68.25s (0:01:08) ===== rm -fr -- /tmp/dh-xdg-rundir-PBNNvnjr dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.13 3.12" returned exit code 13 make: *** [debian/rules:20: binary] Error 25 dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2 I: copying local configuration E: Failed autobuilding of package I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/765930 and its subdirectories Thu Nov 14 20:13:41 UTC 2024 W: No second build log, what happened?