Sat Jun 15 22:11:17 UTC 2024 I: starting to build dipy/unstable/arm64 on jenkins on '2024-06-15 22:10' Sat Jun 15 22:11:17 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_14/46475/console.log Sat Jun 15 22:11:17 UTC 2024 I: Downloading source for unstable/dipy=1.9.0-3 --2024-06-15 22:11:17-- http://deb.debian.org/debian/pool/main/d/dipy/dipy_1.9.0-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2947 (2.9K) [text/prs.lines.tag] Saving to: ‘dipy_1.9.0-3.dsc’ 0K .. 100% 337M=0s 2024-06-15 22:11:17 (337 MB/s) - ‘dipy_1.9.0-3.dsc’ saved [2947/2947] Sat Jun 15 22:11:18 UTC 2024 I: dipy_1.9.0-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dipy Binary: python3-dipy, python3-dipy-lib, python-dipy-doc Architecture: any all Version: 1.9.0-3 Maintainer: Debian Med Packaging Team Uploaders: Yaroslav Halchenko , Michael Hanke , Étienne Mollier Homepage: https://dipy.org Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/dipy Vcs-Git: https://salsa.debian.org/med-team/dipy.git Testsuite: autopkgtest, autopkgtest-pkg-python Testsuite-Triggers: python3-all, python3-matplotlib, python3-nibabel, python3-pytest, python3-sklearn, python3-tables, python3-vtk9, xauth, xvfb Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, libgomp1, cython3, python-is-python3, python3-all-dev, python3-setuptools, python3-mesonpy, python3-numpy, python3-scipy, python3-h5py , python3-matplotlib , python3-nibabel , python3-pil.imagetk , python3-pytest , python3-pandas , python3-tables , python3-tk , python3-trx-python , python3-sklearn , python3-tqdm , xvfb , xauth Build-Depends-Indep: python3-sphinx , python3-numpydoc , python3-skimage , python3-sphinx-design Package-List: python-dipy-doc deb doc optional arch=all python3-dipy deb python optional arch=all python3-dipy-lib deb python optional arch=any Checksums-Sha1: 10a246b509c519655a8af8df949fa05d60af458d 6516685 dipy_1.9.0.orig.tar.gz 97163b210ad44c9d6a19e99b24df692bdf4e95d8 16476 dipy_1.9.0-3.debian.tar.xz Checksums-Sha256: 2760c3d1456dd3620c88836b2aa7d576e73bea10a28ccd795f1582bfaefb4ff1 6516685 dipy_1.9.0.orig.tar.gz 13ea52880874a502574b3868b155e93573bed925d05f172751cc00ff4a51c3ab 16476 dipy_1.9.0-3.debian.tar.xz Files: 7df1186f94264d6e658c4b0116754c50 6516685 dipy_1.9.0.orig.tar.gz 170cd3ce1cbf654c858502abc9bc8c25 16476 dipy_1.9.0-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmZODVIACgkQPCZ2P2xn 5uKVmhAAqAObALDgz0fnJpPcHLZXW5sPp9LdUiVuqAChmBtbLra5HiU1fXI5Tm98 tveJwDlg6YH3c4wIxryyJE8sNj+ftDNw9PTGmiSQoKoPS4/J5YbkdSY8UQpSF7dX z7yv4qJQBK3gXG/OAqB7in6GqNowWdRAFnwzX6hIaUFcg40IAFTCGhFoYgYHC/sp 2/qQ3EpprYhvDFU0Xs2ENPUpW98OBqcIcgtB1thDxp/7pcMvPEHYohtSfnT8dtKZ umAEL94LaquxFVla6p9LfdkB4R07C2ExssQVom99uWWLy5ejgOcY4R9e3AzRi2Fc ObSwt4tikKkr2Qs7iDcefdOjYciDCJBDyFbOfiBGIrHN2cTYrf+ZBhRibqaXc67b J3amaWGc7W1oXnut24xkTkXJskmX2S1nBefaEKQ4AlPfbLt7yIsw8tEscqBkjNs+ JNZHwApYxT3WOd/eSYnUipwcH/eIUsYRBDgwnAwMfCWUBPGRf5X5yDSYLs7uQy3Y h73Q8B0+fLiG5ZeYR7zwIRqEYWKdzPv8cH1W+KbnmDKxrG3YB/5UUCKd5tlK5CVw oDbddtUYBH3zPwilp663kbT7jdEa5Jr86JRNdx056KTVztkULHNm3NZWDnOfMTt0 WbdRhCyv+CVd5FbjtW4qdQui+kvqZ4O3bKRlqlEAgVhjIDB/ljo= =Tj4T -----END PGP SIGNATURE----- Sat Jun 15 22:11:18 UTC 2024 I: Checking whether the package is not for us Sat Jun 15 22:11:18 UTC 2024 I: Starting 1st build on remote node codethink01-arm64.debian.net. Sat Jun 15 22:11:18 UTC 2024 I: Preparing to do remote build '1' on codethink01-arm64.debian.net. Sat Jun 15 22:57:15 UTC 2024 I: Deleting $TMPDIR on codethink01-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 18 16:34:19 -12 2025 I: pbuilder-time-stamp: 1752899659 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dipy_1.9.0-3.dsc] I: copying [./dipy_1.9.0.orig.tar.gz] I: copying [./dipy_1.9.0-3.debian.tar.xz] I: Extracting source gpgv: Signature made Wed May 22 15:20:50 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dipy_1.9.0-3.dsc: no acceptable signature found dpkg-source: info: extracting dipy in dipy-1.9.0 dpkg-source: info: unpacking dipy_1.9.0.orig.tar.gz dpkg-source: info: unpacking dipy_1.9.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying deb_no_sources_for_docs dpkg-source: info: applying skip-tests-needing-internet.patch dpkg-source: info: applying fix-i386.patch dpkg-source: info: applying skip_wall-clock_test.patch dpkg-source: info: applying no-network.patch dpkg-source: info: applying skip-streamwarp-test-in-big-endian.patch dpkg-source: info: applying relay_comparison.patch dpkg-source: info: applying sphinx-default.patch dpkg-source: info: applying fix-privacy-breaches.patch dpkg-source: info: applying pytest-8.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1505649/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='1ddb9c56c7c04db7b4520b65fc1b9c55' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1505649' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.DpKAkTpN/pbuilderrc_wjvC --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.DpKAkTpN/b1 --logfile b1/build.log dipy_1.9.0-3.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink01-arm64 6.1.0-21-cloud-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 5 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1505649/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, libgomp1, cython3, python-is-python3, python3-all-dev, python3-setuptools, python3-mesonpy, python3-numpy, python3-scipy, python3-h5py, python3-matplotlib, python3-nibabel, python3-pil.imagetk, python3-pytest, python3-pandas, python3-tables, python3-tk, python3-trx-python, python3-sklearn, python3-tqdm, xvfb, xauth, python3-sphinx, python3-numpydoc, python3-skimage, python3-sphinx-design dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19700 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python-is-python3; however: Package python-is-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-mesonpy; however: Package python3-mesonpy is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-nibabel; however: Package python3-nibabel is not installed. pbuilder-satisfydepends-dummy depends on python3-pil.imagetk; however: Package python3-pil.imagetk is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-tables; however: Package python3-tables is not installed. pbuilder-satisfydepends-dummy depends on python3-tk; however: Package python3-tk is not installed. pbuilder-satisfydepends-dummy depends on python3-trx-python; however: Package python3-trx-python is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. pbuilder-satisfydepends-dummy depends on python3-tqdm; however: Package python3-tqdm is not installed. pbuilder-satisfydepends-dummy depends on xvfb; however: Package xvfb is not installed. pbuilder-satisfydepends-dummy depends on xauth; however: Package xauth is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-numpydoc; however: Package python3-numpydoc is not installed. pbuilder-satisfydepends-dummy depends on python3-skimage; however: Package python3-skimage is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-design; however: Package python3-sphinx-design is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libblosc1{a} libblosc2-3{a} libbrotli1{a} libbsd0{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} libllvm17t64{a} liblzf1{a} liblzo2-2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libopenjp2-7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsnappy1v5{a} libssh2-1t64{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libunwind8{a} libvulkan1{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxfont2{a} libxft2{a} libxkbfile1{a} libxml2{a} libxmu6{a} libxmuu1{a} libxpm4{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} media-types{a} meson{a} netbase{a} ninja-build{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-is-python3{a} python-matplotlib-data{a} python-tables-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-babel{a} python3-brotli{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cpuinfo{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-deepdiff{a} python3-dev{a} python3-distutils{a} python3-docutils{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-imageio{a} python3-imagesize{a} python3-iniconfig{a} python3-installer{a} python3-jinja2{a} python3-joblib{a} python3-jsonpickle{a} python3-kiwisolver{a} python3-lazy-loader{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-mesonpy{a} python3-minimal{a} python3-mpmath{a} python3-networkx{a} python3-nibabel{a} python3-numexpr{a} python3-numpy{a} python3-numpydoc{a} python3-ordered-set{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pyproject-metadata{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-six{a} python3-skimage{a} python3-skimage-lib{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-design{a} python3-sympy{a} python3-tables{a} python3-tables-lib{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tifffile{a} python3-tk{a} python3-toml{a} python3-tqdm{a} python3-trx-python{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wheel{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} x11-xkb-utils{a} xauth{a} xkb-data{a} xml-core{a} xserver-common{a} xvfb{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules lynx mesa-vulkan-drivers patchelf psmisc publicsuffix python3-bottleneck python3-bs4 python3-clevercsv python3-cssselect python3-dask python3-dipy python3-fuse python3-gdal python3-html5lib python3-odf python3-olefile python3-openpyxl python3-psutil python3-pydicom python3-pydot python3-pygraphviz python3-simplejson python3-yaml shared-mime-info wget xdg-user-dirs xfonts-base 0 packages upgraded, 280 newly installed, 0 to remove and 0 not upgraded. Need to get 241 MB of archives. After unpacking 1094 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libpython3.11-minimal arm64 3.11.9-1 [813 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.2-1 [88.7 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 python3.11-minimal arm64 3.11.9-1 [1767 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-4 [157 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libpython3.11-stdlib arm64 3.11.9-1 [1775 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 python3.11 arm64 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 libpython3.12-minimal arm64 3.12.4-1 [804 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 python3.12-minimal arm64 3.12.4-1 [1918 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 sgml-base all 1.31 [15.4 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-4 [61.7 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-4 [869 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.2.2-1 [1327 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20240203 [158 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-4 [1130 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.1-8.1 [95.1 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.12.1-2 [1394 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.21-14 [496 kB] Get: 36 http://deb.debian.org/debian unstable/main arm64 libtcl8.6 arm64 8.6.14+dfsg-1 [975 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b3 [295 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.43-5 [272 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.13.2+dfsg-1+b4 [408 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.15.0-1.1 [317 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.15.0-1.1 [385 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.9-1+b1 [18.1 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libbsd0 arm64 0.12.2-1 [129 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.2-3+b1 [24.3 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2 [143 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.7-1 [328 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.7-1+b1 [775 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.10-1.1+b1 [27.0 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libxft2 arm64 2.3.6-1+b1 [51.0 kB] Get: 52 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b1 [51.7 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+23 [252 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libxss1 arm64 1:1.2.3-1+b1 [17.0 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libtk8.6 arm64 8.6.14-1 [732 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7 [533 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 blt arm64 2.5.3+dfsg-7 [6024 B] Get: 58 http://deb.debian.org/debian unstable/main arm64 cython3 arm64 3.0.10+dfsg-5 [3120 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 65 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 68 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg-3 [609 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.15.3 [901 kB] Get: 73 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 python3-lib2to3 all 3.12.3-3.1 [77.7 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 python3-distutils all 3.12.3-3.1 [131 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 68.1.2-2 [468 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20240422 [107 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 xml-core all 0.19 [20.1 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 docutils-common all 0.20.1+dfsg-3 [128 kB] Get: 80 http://deb.debian.org/debian unstable/main arm64 fonts-lyx all 2.4.0-1 [189 kB] Get: 81 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.3-1 [22.1 kB] Get: 82 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.0-3 [91.7 kB] Get: 83 http://deb.debian.org/debian unstable/main arm64 libsnappy1v5 arm64 1.2.1-1 [28.4 kB] Get: 84 http://deb.debian.org/debian unstable/main arm64 libblosc1 arm64 1.21.5+ds-1+b1 [39.0 kB] Get: 85 http://deb.debian.org/debian unstable/main arm64 libblosc2-3 arm64 2.14.4+ds-2 [156 kB] Get: 86 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1-1 [22.8 kB] Get: 87 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.20.1-6+b1 [33.0 kB] Get: 88 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.20.1-6+b1 [80.5 kB] Get: 89 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get: 90 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.20.1-6+b1 [315 kB] Get: 91 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.20.1-6+b1 [124 kB] Get: 92 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-6 [20.1 kB] Get: 93 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-6 [55.3 kB] Get: 94 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-1 [173 kB] Get: 95 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.62.1-1 [71.2 kB] Get: 96 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB] Get: 97 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB] Get: 98 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.0-5 [207 kB] Get: 99 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.8.0-1 [411 kB] Get: 100 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.20-1 [41.5 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.121-2 [7972 B] Get: 102 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.121-2 [37.6 kB] Get: 103 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.121-2 [21.6 kB] Get: 104 http://deb.debian.org/debian unstable/main arm64 libdrm-radeon1 arm64 2.4.121-2 [21.2 kB] Get: 105 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20240517-1 [88.9 kB] Get: 106 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.6.2-1 [278 kB] Get: 107 http://deb.debian.org/debian unstable/main arm64 libfontenc1 arm64 1:1.1.8-1 [22.2 kB] Get: 108 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.13-3+b1 [71.3 kB] Get: 109 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 14.1.0-1 [361 kB] Get: 110 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-1+b1 [41.7 kB] Get: 111 http://deb.debian.org/debian unstable/main arm64 libglapi-mesa arm64 24.1.1-2 [46.6 kB] Get: 112 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.7-1+b1 [232 kB] Get: 113 http://deb.debian.org/debian unstable/main arm64 libxcb-dri2-0 arm64 1.17.0-2 [107 kB] Get: 114 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2 [107 kB] Get: 115 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2 [122 kB] Get: 116 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2 [105 kB] Get: 117 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2 [116 kB] Get: 118 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2 [105 kB] Get: 119 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2 [109 kB] Get: 120 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2 [109 kB] Get: 121 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b1 [20.5 kB] Get: 122 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3-1+b1 [9080 B] Get: 123 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b2 [20.1 kB] Get: 124 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.3.283.0-1 [121 kB] Get: 125 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.8.12-3.1+b2 [6508 kB] Get: 126 http://deb.debian.org/debian unstable/main arm64 libllvm17t64 arm64 1:17.0.6-12 [21.3 MB] Get: 127 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 128 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.0-10 [34.0 kB] Get: 129 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 24.1.1-2 [7184 kB] Get: 130 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 24.1.1-2 [151 kB] Get: 131 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-1+b1 [31.0 kB] Get: 132 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-1+b1 [90.9 kB] Get: 133 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.80.3-1 [1391 kB] Get: 134 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-2 [69.2 kB] Get: 135 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 8.3.0-2+b1 [2178 kB] Get: 136 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.3-1 [7664 B] Get: 137 http://deb.debian.org/debian unstable/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-3.3 [1035 kB] Get: 138 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-3.3 [60.1 kB] Get: 139 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.0.10-1+b1 [53.7 kB] Get: 140 http://deb.debian.org/debian unstable/main arm64 libimagequant0 arm64 2.18.0-1+b1 [34.6 kB] Get: 141 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b1 [30.4 kB] Get: 142 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-3 [172 kB] Get: 143 http://deb.debian.org/debian unstable/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 144 http://deb.debian.org/debian unstable/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 145 http://deb.debian.org/debian unstable/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 146 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 7.2.6-8 [150 kB] Get: 147 http://deb.debian.org/debian unstable/main arm64 libjson-perl all 4.10000-1 [87.5 kB] Get: 148 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB] Get: 149 http://deb.debian.org/debian unstable/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1+b1 [25.0 kB] Get: 150 http://deb.debian.org/debian unstable/main arm64 liblcms2-2 arm64 2.14-2+b1 [144 kB] Get: 151 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.0.0+ds-4+b1 [142 kB] Get: 152 http://deb.debian.org/debian unstable/main arm64 liblzf1 arm64 3.6-4+b1 [10.3 kB] Get: 153 http://deb.debian.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3 [48.9 kB] Get: 154 http://deb.debian.org/debian unstable/main arm64 libopenjp2-7 arm64 2.5.0-2+b3 [177 kB] Get: 155 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.42.2-1+b1 [477 kB] Get: 156 http://deb.debian.org/debian unstable/main arm64 libpython3.11t64 arm64 3.11.9-1 [1814 kB] Get: 157 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB] Get: 158 http://deb.debian.org/debian unstable/main arm64 libpython3.11-dev arm64 3.11.9-1 [4358 kB] Get: 159 http://deb.debian.org/debian unstable/main arm64 libpython3-dev arm64 3.11.8-1 [9564 B] Get: 160 http://deb.debian.org/debian unstable/main arm64 libpython3.12-stdlib arm64 3.12.4-1 [1886 kB] Get: 161 http://deb.debian.org/debian unstable/main arm64 libpython3.12t64 arm64 3.12.4-1 [1950 kB] Get: 162 http://deb.debian.org/debian unstable/main arm64 libpython3.12-dev arm64 3.12.4-1 [4734 kB] Get: 163 http://deb.debian.org/debian unstable/main arm64 libpython3-all-dev arm64 3.11.8-1 [1072 B] Get: 164 http://deb.debian.org/debian unstable/main arm64 libqhull-r8.0 arm64 2020.2-6+b1 [226 kB] Get: 165 http://deb.debian.org/debian unstable/main arm64 libraqm0 arm64 0.10.1-1+b1 [13.7 kB] Get: 166 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [111 kB] Get: 167 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.3-1+b1 [32.7 kB] Get: 168 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.4.0-0.1 [267 kB] Get: 169 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.5.1+git230720-4 [307 kB] Get: 170 http://deb.debian.org/debian unstable/main arm64 libunwind8 arm64 1.6.2-3.1 [47.7 kB] Get: 171 http://deb.debian.org/debian unstable/main arm64 libwebpdemux2 arm64 1.4.0-0.1 [110 kB] Get: 172 http://deb.debian.org/debian unstable/main arm64 libwebpmux3 arm64 1.4.0-0.1 [122 kB] Get: 173 http://deb.debian.org/debian unstable/main arm64 libxt6t64 arm64 1:1.2.1-1.2 [172 kB] Get: 174 http://deb.debian.org/debian unstable/main arm64 libxmu6 arm64 2:1.1.3-3+b2 [55.5 kB] Get: 175 http://deb.debian.org/debian unstable/main arm64 libxpm4 arm64 1:3.5.17-1+b1 [52.9 kB] Get: 176 http://deb.debian.org/debian unstable/main arm64 libxaw7 arm64 2:1.0.14-1+b2 [182 kB] Get: 177 http://deb.debian.org/debian unstable/main arm64 libxfont2 arm64 1:2.0.6-1+b1 [123 kB] Get: 178 http://deb.debian.org/debian unstable/main arm64 libxkbfile1 arm64 1:1.1.0-1+b1 [72.3 kB] Get: 179 http://deb.debian.org/debian unstable/main arm64 libxmuu1 arm64 2:1.1.3-3+b2 [22.0 kB] Get: 180 http://deb.debian.org/debian unstable/main arm64 libxrandr2 arm64 2:1.5.4-1 [35.7 kB] Get: 181 http://deb.debian.org/debian unstable/main arm64 libxslt1.1 arm64 1.1.35-1+b1 [221 kB] Get: 182 http://deb.debian.org/debian unstable/main arm64 ninja-build arm64 1.12.1-1 [128 kB] Get: 183 http://deb.debian.org/debian unstable/main arm64 meson all 1.4.1-1 [604 kB] Get: 184 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 24.0-1 [45.5 kB] Get: 185 http://deb.debian.org/debian unstable/main arm64 python3-pyproject-hooks all 1.1.0-1 [11.3 kB] Get: 186 http://deb.debian.org/debian unstable/main arm64 python3-toml all 0.10.2-1 [16.2 kB] Get: 187 http://deb.debian.org/debian unstable/main arm64 python3-wheel all 0.43.0-1 [52.5 kB] Get: 188 http://deb.debian.org/debian unstable/main arm64 python3-build all 1.2.1-1 [34.1 kB] Get: 189 http://deb.debian.org/debian unstable/main arm64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 190 http://deb.debian.org/debian unstable/main arm64 pybuild-plugin-pyproject all 6.20240422 [11.1 kB] Get: 191 http://deb.debian.org/debian unstable/main arm64 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 192 http://deb.debian.org/debian unstable/main arm64 python-is-python3 all 3.11.4-1 [3044 B] Get: 193 http://deb.debian.org/debian unstable/main arm64 python-matplotlib-data all 3.6.3-2 [2744 kB] Get: 194 http://deb.debian.org/debian unstable/main arm64 python-tables-data all 3.9.2-2 [49.8 kB] Get: 195 http://deb.debian.org/debian unstable/main arm64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 196 http://deb.debian.org/debian unstable/main arm64 python3.12 arm64 3.12.4-1 [664 kB] Get: 197 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.11.8-1 [1056 B] Get: 198 http://deb.debian.org/debian unstable/main arm64 python3.11-dev arm64 3.11.9-1 [501 kB] Get: 199 http://deb.debian.org/debian unstable/main arm64 python3-dev arm64 3.11.8-1 [26.1 kB] Get: 200 http://deb.debian.org/debian unstable/main arm64 python3.12-dev arm64 3.12.4-1 [499 kB] Get: 201 http://deb.debian.org/debian unstable/main arm64 python3-all-dev arm64 3.11.8-1 [1072 B] Get: 202 http://deb.debian.org/debian unstable/main arm64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 203 http://deb.debian.org/debian unstable/main arm64 python3-attr all 23.2.0-2 [65.5 kB] Get: 204 http://deb.debian.org/debian unstable/main arm64 python3-tz all 2024.1-2 [30.9 kB] Get: 205 http://deb.debian.org/debian unstable/main arm64 python3-babel all 2.14.0-1 [111 kB] Get: 206 http://deb.debian.org/debian unstable/main arm64 python3-brotli arm64 1.1.0-2+b3 [316 kB] Get: 207 http://deb.debian.org/debian unstable/main arm64 python3-certifi all 2024.6.2-1 [157 kB] Get: 208 http://deb.debian.org/debian unstable/main arm64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 209 http://deb.debian.org/debian unstable/main arm64 python3-charset-normalizer all 3.3.2-1 [51.6 kB] Get: 210 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:1.26.4+ds-10 [4221 kB] Get: 211 http://deb.debian.org/debian unstable/main arm64 python3-contourpy arm64 1.0.7-3 [247 kB] Get: 212 http://deb.debian.org/debian unstable/main arm64 python3-cpuinfo all 9.0.0+git20221119-1 [23.2 kB] Get: 213 http://deb.debian.org/debian unstable/main arm64 python3-cycler all 0.12.1-1 [9496 B] Get: 214 http://deb.debian.org/debian unstable/main arm64 python3-six all 1.16.0-6 [16.3 kB] Get: 215 http://deb.debian.org/debian unstable/main arm64 python3-dateutil all 2.9.0-2 [79.4 kB] Get: 216 http://deb.debian.org/debian unstable/main arm64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 217 http://deb.debian.org/debian unstable/main arm64 python3-jsonpickle all 3.0.4+dfsg-1 [41.4 kB] Get: 218 http://deb.debian.org/debian unstable/main arm64 python3-ordered-set all 4.1.0-1 [9628 B] Get: 219 http://deb.debian.org/debian unstable/main arm64 python3-deepdiff all 6.7.1-2 [65.6 kB] Get: 220 http://deb.debian.org/debian unstable/main arm64 python3-roman all 3.3-3 [9880 B] Get: 221 http://deb.debian.org/debian unstable/main arm64 python3-docutils all 0.20.1+dfsg-3 [389 kB] Get: 222 http://deb.debian.org/debian unstable/main arm64 python3-scipy arm64 1.12.0-2 [18.8 MB] Get: 223 http://deb.debian.org/debian unstable/main arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get: 224 http://deb.debian.org/debian unstable/main arm64 python3-mpmath all 1.3.0-1 [419 kB] Get: 225 http://deb.debian.org/debian unstable/main arm64 python3-sympy all 1.12.1-1 [3869 kB] Get: 226 http://deb.debian.org/debian unstable/main arm64 python3-fs all 2.4.16-4 [95.4 kB] Get: 227 http://deb.debian.org/debian unstable/main arm64 python3-lxml arm64 5.2.1-1 [1767 kB] Get: 228 http://deb.debian.org/debian unstable/main arm64 python3-lz4 arm64 4.0.2+dfsg-1+b3 [26.6 kB] Get: 229 http://deb.debian.org/debian unstable/main arm64 unicode-data all 15.1.0-1 [8547 kB] Get: 230 http://deb.debian.org/debian unstable/main arm64 python3-fonttools arm64 4.46.0-1 [1510 kB] Get: 231 http://deb.debian.org/debian unstable/main arm64 python3-h5py-serial arm64 3.11.0-2 [1441 kB] Get: 232 http://deb.debian.org/debian unstable/main arm64 python3-h5py all 3.11.0-2 [14.5 kB] Get: 233 http://deb.debian.org/debian unstable/main arm64 python3-idna all 3.6-2.1 [38.6 kB] Get: 234 http://deb.debian.org/debian unstable/main arm64 python3-tk arm64 3.12.3-3.1 [113 kB] Get: 235 http://deb.debian.org/debian unstable/main arm64 python3-pil.imagetk arm64 10.3.0-2 [80.0 kB] Get: 236 http://deb.debian.org/debian unstable/main arm64 python3-pil arm64 10.3.0-2 [552 kB] Get: 237 http://deb.debian.org/debian unstable/main arm64 python3-imageio all 2.34.1-1 [228 kB] Get: 238 http://deb.debian.org/debian unstable/main arm64 python3-imagesize all 1.4.1-1 [6688 B] Get: 239 http://deb.debian.org/debian unstable/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 240 http://deb.debian.org/debian unstable/main arm64 python3-markupsafe arm64 2.1.5-1 [14.6 kB] Get: 241 http://deb.debian.org/debian unstable/main arm64 python3-jinja2 all 3.1.3-1 [119 kB] Get: 242 http://deb.debian.org/debian unstable/main arm64 python3-joblib all 1.3.2-2 [218 kB] Get: 243 http://deb.debian.org/debian unstable/main arm64 python3-kiwisolver arm64 1.4.5-1 [75.0 kB] Get: 244 http://deb.debian.org/debian unstable/main arm64 python3-lazy-loader all 0.3-1 [11.1 kB] Get: 245 http://deb.debian.org/debian unstable/main arm64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 246 http://deb.debian.org/debian unstable/main arm64 python3-matplotlib arm64 3.6.3-2 [7978 kB] Get: 247 http://deb.debian.org/debian unstable/main arm64 python3-pyproject-metadata all 0.8.0-1 [9648 B] Get: 248 http://deb.debian.org/debian unstable/main arm64 python3-mesonpy all 0.15.0-1 [101 kB] Get: 249 http://deb.debian.org/debian unstable/main arm64 python3-networkx all 3.2.1-4 [14.2 MB] Get: 250 http://deb.debian.org/debian unstable/main arm64 python3-nibabel all 5.2.1-2 [2659 kB] Get: 251 http://deb.debian.org/debian unstable/main arm64 python3-numexpr arm64 2.10.0-2 [92.1 kB] Get: 252 http://deb.debian.org/debian unstable/main arm64 sphinx-common all 7.2.6-8 [702 kB] Get: 253 http://deb.debian.org/debian unstable/main arm64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 254 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 255 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 256 http://deb.debian.org/debian unstable/main arm64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 257 http://deb.debian.org/debian unstable/main arm64 python3-sphinx all 7.2.6-8 [552 kB] Get: 258 http://deb.debian.org/debian unstable/main arm64 python3-tabulate all 0.9.0-1 [45.9 kB] Get: 259 http://deb.debian.org/debian unstable/main arm64 python3-numpydoc all 1.6.0-2 [49.6 kB] Get: 260 http://deb.debian.org/debian unstable/main arm64 python3-pandas-lib arm64 2.1.4+dfsg-8 [6609 kB] Get: 261 http://deb.debian.org/debian unstable/main arm64 python3-pandas all 2.1.4+dfsg-8 [3015 kB] Get: 262 http://deb.debian.org/debian unstable/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 263 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.2.2-2 [248 kB] Get: 264 http://deb.debian.org/debian unstable/main arm64 python3-setuptools-scm all 8.1.0-1 [40.5 kB] Get: 265 http://deb.debian.org/debian unstable/main arm64 python3-skimage-lib arm64 0.23.2-1 [3470 kB] Get: 266 http://deb.debian.org/debian unstable/main arm64 python3-tifffile all 20240522-1 [184 kB] Get: 267 http://deb.debian.org/debian unstable/main arm64 python3-skimage all 0.23.2-1 [20.6 MB] Get: 268 http://deb.debian.org/debian unstable/main arm64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 269 http://deb.debian.org/debian unstable/main arm64 python3-sklearn-lib arm64 1.4.2+dfsg-1 [5693 kB] Get: 270 http://deb.debian.org/debian unstable/main arm64 python3-sklearn all 1.4.2+dfsg-1 [2247 kB] Get: 271 http://deb.debian.org/debian unstable/main arm64 python3-sphinx-design all 0.6.0-2 [883 kB] Get: 272 http://deb.debian.org/debian unstable/main arm64 python3-tables-lib arm64 3.9.2-2+b1 [701 kB] Get: 273 http://deb.debian.org/debian unstable/main arm64 python3-tables all 3.9.2-2 [345 kB] Get: 274 http://deb.debian.org/debian unstable/main arm64 python3-tqdm all 4.66.4-1 [90.8 kB] Get: 275 http://deb.debian.org/debian unstable/main arm64 python3-trx-python all 0.2.9-1 [40.2 kB] Get: 276 http://deb.debian.org/debian unstable/main arm64 x11-xkb-utils arm64 7.7+8+b1 [149 kB] Get: 277 http://deb.debian.org/debian unstable/main arm64 xauth arm64 1:1.1.2-1 [35.5 kB] Get: 278 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.41-2 [795 kB] Get: 279 http://deb.debian.org/debian unstable/main arm64 xserver-common all 2:21.1.12-1 [2391 kB] Get: 280 http://deb.debian.org/debian unstable/main arm64 xvfb arm64 2:21.1.12-1 [3095 kB] Fetched 241 MB in 1s (238 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19700 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_arm64.deb ... Unpacking libpython3.11-minimal:arm64 (3.11.9-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.6.2-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_arm64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:arm64 (3.11.9-1) ... Setting up libexpat1:arm64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20016 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_arm64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../5-libreadline8t64_8.2-4_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:arm64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_arm64.deb ... Unpacking libpython3.11-stdlib:arm64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_arm64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21008 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_arm64.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package libpython3.12-minimal:arm64. Preparing to unpack .../001-libpython3.12-minimal_3.12.4-1_arm64.deb ... Unpacking libpython3.12-minimal:arm64 (3.12.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../002-python3.12-minimal_3.12.4-1_arm64.deb ... Unpacking python3.12-minimal (3.12.4-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../003-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../004-libproc2-0_2%3a4.0.4-4_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../005-procps_2%3a4.0.4-4_arm64.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../006-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../007-openssl_3.2.2-1_arm64.deb ... Unpacking openssl (3.2.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../008-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../009-libmagic-mgc_1%3a5.45-3_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../010-libmagic1t64_1%3a5.45-3_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../011-file_1%3a5.45-3_arm64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../012-gettext-base_0.21-14+b1_arm64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../013-libuchardet0_0.0.8-1+b1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../014-groff-base_1.23.0-4_arm64.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../015-bsdextrautils_2.40.1-8.1_arm64.deb ... Unpacking bsdextrautils (2.40.1-8.1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../016-libpipeline1_1.5.7-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../017-man-db_2.12.1-2_arm64.deb ... Unpacking man-db (2.12.1-2) ... Selecting previously unselected package m4. Preparing to unpack .../018-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../019-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../020-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../021-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../022-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libtcl8.6:arm64. Preparing to unpack .../023-libtcl8.6_8.6.14+dfsg-1_arm64.deb ... Unpacking libtcl8.6:arm64 (8.6.14+dfsg-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../024-libbrotli1_1.1.0-2+b3_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b3) ... Selecting previously unselected package libpng16-16t64:arm64. Preparing to unpack .../025-libpng16-16t64_1.6.43-5_arm64.deb ... Unpacking libpng16-16t64:arm64 (1.6.43-5) ... Selecting previously unselected package libfreetype6:arm64. Preparing to unpack .../026-libfreetype6_2.13.2+dfsg-1+b4_arm64.deb ... Unpacking libfreetype6:arm64 (2.13.2+dfsg-1+b4) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../029-fontconfig-config_2.15.0-1.1_arm64.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:arm64. Preparing to unpack .../030-libfontconfig1_2.15.0-1.1_arm64.deb ... Unpacking libfontconfig1:arm64 (2.15.0-1.1) ... Selecting previously unselected package libxau6:arm64. Preparing to unpack .../031-libxau6_1%3a1.0.9-1+b1_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.9-1+b1) ... Selecting previously unselected package libbsd0:arm64. Preparing to unpack .../032-libbsd0_0.12.2-1_arm64.deb ... Unpacking libbsd0:arm64 (0.12.2-1) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../033-libxdmcp6_1%3a1.1.2-3+b1_arm64.deb ... Unpacking libxdmcp6:arm64 (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:arm64. Preparing to unpack .../034-libxcb1_1.17.0-2_arm64.deb ... Unpacking libxcb1:arm64 (1.17.0-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../035-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:arm64. Preparing to unpack .../036-libx11-6_2%3a1.8.7-1+b1_arm64.deb ... Unpacking libx11-6:arm64 (2:1.8.7-1+b1) ... Selecting previously unselected package libxrender1:arm64. Preparing to unpack .../037-libxrender1_1%3a0.9.10-1.1+b1_arm64.deb ... Unpacking libxrender1:arm64 (1:0.9.10-1.1+b1) ... Selecting previously unselected package libxft2:arm64. Preparing to unpack .../038-libxft2_2.3.6-1+b1_arm64.deb ... Unpacking libxft2:arm64 (2.3.6-1+b1) ... Selecting previously unselected package libxext6:arm64. Preparing to unpack .../039-libxext6_2%3a1.3.4-1+b1_arm64.deb ... Unpacking libxext6:arm64 (2:1.3.4-1+b1) ... Selecting previously unselected package x11-common. Preparing to unpack .../040-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package libxss1:arm64. Preparing to unpack .../041-libxss1_1%3a1.2.3-1+b1_arm64.deb ... Unpacking libxss1:arm64 (1:1.2.3-1+b1) ... Selecting previously unselected package libtk8.6:arm64. Preparing to unpack .../042-libtk8.6_8.6.14-1_arm64.deb ... Unpacking libtk8.6:arm64 (8.6.14-1) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../043-tk8.6-blt2.5_2.5.3+dfsg-7_arm64.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... Selecting previously unselected package blt. Preparing to unpack .../044-blt_2.5.3+dfsg-7_arm64.deb ... Unpacking blt (2.5.3+dfsg-7) ... Selecting previously unselected package cython3. Preparing to unpack .../045-cython3_3.0.10+dfsg-5_arm64.deb ... Unpacking cython3 (3.0.10+dfsg-5) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../046-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../047-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../048-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../049-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... 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Setting up libnghttp2-14:arm64 (1.62.1-1) ... Setting up libdeflate0:arm64 (1.20-1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libqhull-r8.0:arm64 (2020.2-6+b1) ... Setting up xkb-data (2.41-2) ... Setting up liblzo2-2:arm64 (2.10-3) ... Setting up libcom-err2:arm64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libunwind8:arm64 (1.6.2-3.1) ... Setting up libjbig0:arm64 (2.1-6.1+b1) ... Setting up libaec0:arm64 (1.1.3-1) ... Setting up ninja-build (1.12.1-1) ... Setting up libelf1t64:arm64 (0.191-1+b1) ... Setting up python-babel-localedata (2.14.0-1) ... Setting up libblosc2-3:arm64 (2.14.4+ds-2) ... Setting up libsnappy1v5:arm64 (1.2.1-1) ... Setting up libkrb5support0:arm64 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-6) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Sat Jul 19 04:35:02 UTC 2025. Universal Time is now: Sat Jul 19 04:35:02 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up libfontenc1:arm64 (1:1.1.8-1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:arm64 (4.8.12-3.1+b2) ... Setting up libglib2.0-0t64:arm64 (2.80.3-1) ... No schema files found: doing nothing. Setting up libblas3:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libexpat1-dev:arm64 (2.6.2-1) ... Setting up libjpeg62-turbo:arm64 (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up liblzf1:arm64 (3.6-4+b1) ... Setting up libfribidi0:arm64 (1.0.13-3+b1) ... Setting up libimagequant0:arm64 (2.18.0-1+b1) ... Setting up libproc2-0:arm64 (2:4.0.4-4) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:arm64 (1.6.43-5) ... Setting up libtcl8.6:arm64 (8.6.14+dfsg-1) ... Setting up autopoint (0.21-14) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libsensors5:arm64 (1:3.6.0-10) ... Setting up libk5crypto3:arm64 (1.20.1-6+b1) ... Setting up libglapi-mesa:arm64 (24.1.1-2) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-6) ... Setting up libgfortran5:arm64 (14.1.0-1) ... Setting up libvulkan1:arm64 (1.3.283.0-1) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:arm64 (1.4.0-0.1) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libxshmfence1:arm64 (1.3-1+b1) ... Setting up libtiff6:arm64 (4.5.1+git230720-4) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up libjson-perl (4.10000-1) ... Setting up libblosc1:arm64 (1.21.5+ds-1+b1) ... Setting up libopenjp2-7:arm64 (2.5.0-2+b3) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:arm64 (1.20.1-6+b1) ... Setting up libssh2-1t64:arm64 (1.11.0-5) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up python-matplotlib-data (3.6.3-2) ... Setting up openssl (3.2.2-1) ... Setting up libwebpmux3:arm64 (1.4.0-0.1) ... Setting up libbsd0:arm64 (0.12.2-1) ... Setting up libdrm-common (2.4.121-2) ... Setting up readline-common (8.2-4) ... Setting up libxml2:arm64 (2.12.7+dfsg-3) ... Setting up python-tables-data (3.9.2-2) ... Setting up libsz2:arm64 (1.1.3-1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up python3.12-minimal (3.12.4-1) ... Setting up libice6:arm64 (2:1.0.10-1+b1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3+b1) ... Setting up liblapack3:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb1:arm64 (1.17.0-2) ... Setting up gettext (0.21-14+b1) ... Setting up libxcb-xfixes0:arm64 (1.17.0-2) ... Setting up libtool (2.4.7-7) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libxcb-glx0:arm64 (1.17.0-2) ... Setting up libwebpdemux2:arm64 (1.4.0-0.1) ... Setting up libedit2:arm64 (3.1-20240517-1) ... Setting up libxcb-shm0:arm64 (1.17.0-2) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libxcb-present0:arm64 (1.17.0-2) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libllvm17t64:arm64 (1:17.0.6-12) ... Setting up libfreetype6:arm64 (2.13.2+dfsg-1+b4) ... Setting up libxcb-sync1:arm64 (1.17.0-2) ... Setting up libgssapi-krb5-2:arm64 (1.20.1-6+b1) ... Setting up libjs-sphinxdoc (7.2.6-8) ... Setting up libreadline8t64:arm64 (8.2-4) ... Setting up libxcb-dri2-0:arm64 (1.17.0-2) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libdrm2:arm64 (2.4.121-2) ... Setting up groff-base (1.23.0-4) ... Setting up libxcb-randr0:arm64 (1.17.0-2) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:arm64 (1.1.35-1+b1) ... Setting up libx11-6:arm64 (2:1.8.7-1+b1) ... Setting up libharfbuzz0b:arm64 (8.3.0-2+b1) ... Setting up libfontconfig1:arm64 (2.15.0-1.1) ... Setting up libxkbfile1:arm64 (1:1.1.0-1+b1) ... Setting up libsm6:arm64 (2:1.2.3-1+b1) ... Setting up libxfont2:arm64 (1:2.0.6-1+b1) ... Setting up libxmuu1:arm64 (2:1.1.3-3+b2) ... Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1+b1) ... Setting up libdrm-amdgpu1:arm64 (2.4.121-2) ... Setting up libxcb-dri3-0:arm64 (1.17.0-2) ... Setting up libx11-xcb1:arm64 (2:1.8.7-1+b1) ... Setting up libpython3.12-stdlib:arm64 (3.12.4-1) ... Setting up libxpm4:arm64 (1:3.5.17-1+b1) ... Setting up libxrender1:arm64 (1:0.9.10-1.1+b1) ... Setting up libcurl4t64:arm64 (8.8.0-1) ... Setting up libdrm-radeon1:arm64 (2.4.121-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:arm64 (3.11.9-1) ... Setting up python3.12 (3.12.4-1) ... Setting up libgl1-mesa-dri:arm64 (24.1.1-2) ... Setting up libpython3.11t64:arm64 (3.11.9-1) ... Setting up libxext6:arm64 (2:1.3.4-1+b1) ... Setting up man-db (2.12.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxxf86vm1:arm64 (1:1.1.4-1+b2) ... Setting up libpython3.12t64:arm64 (3.12.4-1) ... Setting up libxfixes3:arm64 (1:6.0.0-2+b1) ... Setting up libpython3.11-dev:arm64 (3.11.9-1) ... Setting up libraqm0:arm64 (0.10.1-1+b1) ... Setting up sphinx-common (7.2.6-8) ... Setting up libxt6t64:arm64 (1:1.2.1-1.2) ... Setting up libxrandr2:arm64 (2:1.5.4-1) ... Setting up xauth (1:1.1.2-1) ... Setting up libxss1:arm64 (1:1.2.3-1+b1) ... Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-3.3) ... Setting up libpython3-stdlib:arm64 (3.11.8-1) ... Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-3.3) ... Setting up python3.11 (3.11.9-1) ... Setting up libxft2:arm64 (2.3.6-1+b1) ... Setting up libxmu6:arm64 (2:1.1.3-3+b2) ... Setting up libglx-mesa0:arm64 (24.1.1-2) ... Setting up libpython3-dev:arm64 (3.11.8-1) ... Setting up libglx0:arm64 (1.7.0-1+b1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up libtk8.6:arm64 (8.6.14-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libpython3.12-dev:arm64 (3.12.4-1) ... Setting up libxaw7:arm64 (2:1.0.14-1+b2) ... Setting up python3-markupsafe (2.1.5-1) ... Setting up python3-wheel (0.43.0-1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-6) ... Setting up python3-pil:arm64 (10.3.0-2) ... Setting up python3-roman (3.3-3) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.0-1) ... Setting up libgl1:arm64 (1.7.0-1+b1) ... Setting up python3-pyproject-hooks (1.1.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.6.2-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up libpython3-all-dev:arm64 (3.11.8-1) ... Setting up python3-brotli (1.1.0-2+b3) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.5-1) ... Setting up python3-idna (3.6-2.1) ... Setting up python3.12-dev (3.12.4-1) ... Setting up cython3 (3.0.10+dfsg-5) ... Setting up python3-cpuinfo (9.0.0+git20221119-1) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-lxml:arm64 (5.2.1-1) ... Setting up python3-dateutil (2.9.0-2) ... Setting up python3-lazy-loader (0.3-1) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-build (1.2.1-1) ... Setting up python3-lib2to3 (3.12.3-3.1) ... Setting up python-is-python3 (3.11.4-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-3.1) ... python3.12: can't get files for byte-compilation Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.12.1-1) ... Setting up python3-attr (23.2.0-2) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up python3-jsonpickle (3.0.4+dfsg-1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-joblib (1.3.2-2) ... Setting up python3-pyproject-metadata (0.8.0-1) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-lz4 (4.0.2+dfsg-1+b3) ... Setting up python3-charset-normalizer (3.3.2-1) ... Setting up python3-pytest (8.2.2-2) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up x11-xkb-utils (7.7+8+b1) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3-tqdm (4.66.4-1) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up python3-tabulate (0.9.0-1) ... Setting up meson (1.4.1-1) ... Setting up python3-all (3.11.8-1) ... Setting up python3-ordered-set (4.1.0-1) ... Setting up python3-tk:arm64 (3.12.3-3.1) ... Setting up python3-networkx (3.2.1-4) ... Setting up python3-setuptools-scm (8.1.0-1) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-pil.imagetk:arm64 (10.3.0-2) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-10) ... Setting up python3-mesonpy (0.15.0-1) ... Setting up python3-contourpy (1.0.7-3) ... Setting up xserver-common (2:21.1.12-1) ... Setting up python3-imageio (2.34.1-1) ... Setting up dh-python (6.20240422) ... Setting up python3-all-dev (3.11.8-1) ... Setting up python3-deepdiff (6.7.1-2) ... Setting up python3-scipy (1.12.0-2) ... Setting up python3-skimage-lib:arm64 (0.23.2-1) ... Setting up pybuild-plugin-pyproject (6.20240422) ... Setting up python3-tables-lib (3.9.2-2+b1) ... Setting up xvfb (2:21.1.12-1) ... Setting up python3-pandas-lib:arm64 (2.1.4+dfsg-8) ... Setting up python3-sklearn-lib:arm64 (1.4.2+dfsg-1) ... Setting up python3-h5py-serial (3.11.0-2) ... Setting up python3-tifffile (20240522-1) ... Setting up python3-pandas (2.1.4+dfsg-8) ... Setting up python3-nibabel (5.2.1-2) ... Setting up python3-h5py (3.11.0-2) ... Setting up python3-sklearn (1.4.2+dfsg-1) ... Setting up python3-numexpr (2.10.0-2) ... Setting up python3-trx-python (0.2.9-1) ... Setting up python3-tables (3.9.2-2) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up python3-fonttools (4.46.0-1) ... Setting up python3-matplotlib (3.6.3-2) ... Setting up python3-skimage (0.23.2-1) ... Processing triggers for libc-bin (2.38-13) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.20.1+dfsg-3) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.20.1+dfsg-3) ... Setting up python3-sphinx (7.2.6-8) ... Setting up python3-sphinx-design (0.6.0-2) ... Setting up python3-numpydoc (1.6.0-2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/dipy-1.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dipy_1.9.0-3_source.changes dpkg-buildpackage: info: source package dipy dpkg-buildpackage: info: source version 1.9.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 dpkg-source: info: using options from dipy-1.9.0/debian/source/options: --extend-diff-ignore=(^|/)dipy/COMMIT_INFO.txt$ debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' dh_auto_clean || true rm -rf .pybuild __pycache__ find dipy -name "*\.c" -delete make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' dh_autoreconf_clean -O--buildsystem=pybuild debian/rules execute_before_dh_clean make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' rm -rf build doc-stamp /usr/bin/make -C doc clean make[2]: Entering directory '/build/reproducible-path/dipy-1.9.0/doc' rm -rf reference/*.rst rm -rf reference_cmd/*.rst rm -rf examples_revamped cd examples_built && find . -not -name "README" -not -name ".gitignore" -exec rm -rfd {} \; || true rm: refusing to remove '.' or '..' directory: skipping '.' rm -rf _build/* rm *-stamp rm: cannot remove '*-stamp': No such file or directory make[2]: [Makefile:32: clean] Error 1 (ignored) make[2]: Leaving directory '/build/reproducible-path/dipy-1.9.0/doc' make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' chmod 0644 doc/examples/*.py dh_auto_build I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.12_dipy --config-setting compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/aarch64-linux-gnu * Building wheel... + meson setup /build/reproducible-path/dipy-1.9.0 /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2 -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/aarch64-linux-gnu --native-file=/build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/meson-python-native-file.ini The Meson build system Version: 1.4.1 Source dir: /build/reproducible-path/dipy-1.9.0 Build dir: /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2 Build type: native build Project name: dipy Project version: 1.9.0 C compiler for the host machine: cc (gcc 13.2.0 "cc (Debian 13.2.0-25) 13.2.0") C linker for the host machine: cc ld.bfd 2.42 C++ compiler for the host machine: c++ (gcc 13.2.0 "c++ (Debian 13.2.0-25) 13.2.0") C++ linker for the host machine: c++ ld.bfd 2.42 Cython compiler for the host machine: cython (cython 3.0.10) Host machine cpu family: aarch64 Host machine cpu: aarch64 Program python found: YES (/usr/bin/python3.12) Did not find pkg-config by name 'pkg-config' Found pkg-config: NO Run-time dependency python found: YES 3.12 Program cython found: YES (/usr/bin/cython) Library m found: YES Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-format-extra-args: YES Compiler for C++ supports arguments -Wno-format: NO Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Run-time dependency OpenMP found: YES 4.5 Checking if "SSE intrinsics" compiles: NO Checking if "ARM NEON intrinsics" compiles: YES Build targets in project: 45 dipy 1.9.0 User defined options Native files : /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/meson-python-native-file.ini buildtype : release libdir : lib/aarch64-linux-gnu localstatedir: /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload b_ndebug : if-release b_vscrt : md Found ninja-1.12.1 at /usr/bin/ninja Generating targets: 0%| | 0/45 eta ? Writing build.ninja: 0%| | 0/188 eta ? + /usr/bin/ninja --verbose [1/123] /usr/bin/python3.12 ../dipy/../tools/version_utils.py --source-root .. [2/123] /usr/bin/meson --internal copy ../dipy/../src/conditional_omp.h dipy/conditional_omp.h [3/123] /usr/bin/meson --internal copy ../dipy/../src/safe_openmp.pxd dipy/safe_openmp.pxd [4/123] /usr/bin/meson --internal copy ../dipy/__init__.py dipy/__init__.py [5/123] /usr/bin/meson --internal copy ../dipy/../src/cythonutils.h dipy/cythonutils.h [6/123] /usr/bin/meson --internal copy ../dipy/../src/dpy_math.h dipy/dpy_math.h [7/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so.p/shift_twist_convolution.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/denoise/shift_twist_convolution.pyx [8/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/bootstrap_direction_getter.cpython-312-aarch64-linux-gnu.so.p/bootstrap_direction_getter.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy 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--include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/align/transforms.pyx [17/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/pmf.cpython-312-aarch64-linux-gnu.so.p/pmf.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/direction/pmf.pyx [18/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/parzenhist.cpython-312-aarch64-linux-gnu.so.p/parzenhist.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/align/parzenhist.pyx [19/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/expectmax.cpython-312-aarch64-linux-gnu.so.p/expectmax.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/align/expectmax.pyx [20/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/quick_squash.cpython-312-aarch64-linux-gnu.so.p/quick_squash.c --include-dir 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--fast-fail --warning-errors --output-file dipy/core/interpolation.cpython-312-aarch64-linux-gnu.so.p/interpolation.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/core/interpolation.pyx [25/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/closest_peak_direction_getter.cpython-312-aarch64-linux-gnu.so.p/closest_peak_direction_getter.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/direction/closest_peak_direction_getter.pyx [26/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/vec_val_sum.cpython-312-aarch64-linux-gnu.so.p/vec_val_sum.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/reconst/vec_val_sum.pyx [27/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/clustering_algorithms.cpython-312-aarch64-linux-gnu.so.p/clustering_algorithms.c --include-dir 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--include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/segment/featurespeed.pyx [32/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/distances.cpython-312-aarch64-linux-gnu.so.p/distances.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/tracking/distances.pyx [33/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/mrf.cpython-312-aarch64-linux-gnu.so.p/mrf.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/segment/mrf.pyx [34/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so.p/propspeed.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/tracking/propspeed.pyx [35/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/direction_getter.cpython-312-aarch64-linux-gnu.so.p/direction_getter.c --include-dir 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dipy/tracking/streamlinespeed.cpython-312-aarch64-linux-gnu.so.p/streamlinespeed.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/tracking/streamlinespeed.pyx [40/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/omp.cpython-312-aarch64-linux-gnu.so.p/omp.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/utils/omp.pyx [41/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/fast_numpy.cpython-312-aarch64-linux-gnu.so.p/fast_numpy.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/utils/fast_numpy.pyx [42/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/stopping_criterion.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/tracking/stopping_criterion.pyx [43/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so.p/test_fast_numpy.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/utils/tests/test_fast_numpy.pyx [44/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/vox2track.cpython-312-aarch64-linux-gnu.so.p/vox2track.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/tracking/vox2track.pyx [45/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so.p/vector_fields.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy ../dipy/align/vector_fields.pyx [46/123] cc -Idipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -MF dipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o.d -o dipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -c dipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so.p/shift_twist_convolution.c [47/123] cc -Idipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so.p/meson-generated_bundlemin.c.o -MF dipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so.p/meson-generated_bundlemin.c.o.d -o dipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so.p/meson-generated_bundlemin.c.o -c dipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so.p/bundlemin.c [48/123] cc -Idipy/denoise/denspeed.cpython-312-aarch64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/denspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_denspeed.c.o -MF dipy/denoise/denspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_denspeed.c.o.d -o dipy/denoise/denspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_denspeed.c.o -c dipy/denoise/denspeed.cpython-312-aarch64-linux-gnu.so.p/denspeed.c [49/123] cc -Idipy/denoise/pca_noise_estimate.cpython-312-aarch64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/pca_noise_estimate.cpython-312-aarch64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -MF dipy/denoise/pca_noise_estimate.cpython-312-aarch64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o.d -o dipy/denoise/pca_noise_estimate.cpython-312-aarch64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -c dipy/denoise/pca_noise_estimate.cpython-312-aarch64-linux-gnu.so.p/pca_noise_estimate.c [50/123] cc -Idipy/denoise/nlmeans_block.cpython-312-aarch64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/nlmeans_block.cpython-312-aarch64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -MF dipy/denoise/nlmeans_block.cpython-312-aarch64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o.d -o dipy/denoise/nlmeans_block.cpython-312-aarch64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -c dipy/denoise/nlmeans_block.cpython-312-aarch64-linux-gnu.so.p/nlmeans_block.c [51/123] cc -Idipy/align/transforms.cpython-312-aarch64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/transforms.cpython-312-aarch64-linux-gnu.so.p/meson-generated_transforms.c.o -MF dipy/align/transforms.cpython-312-aarch64-linux-gnu.so.p/meson-generated_transforms.c.o.d -o dipy/align/transforms.cpython-312-aarch64-linux-gnu.so.p/meson-generated_transforms.c.o -c dipy/align/transforms.cpython-312-aarch64-linux-gnu.so.p/transforms.c [52/123] cc -Idipy/direction/bootstrap_direction_getter.cpython-312-aarch64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration 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dipy/tracking/localtrack.cpython-312-aarch64-linux-gnu.so.p/meson-generated_localtrack.c.o -MF dipy/tracking/localtrack.cpython-312-aarch64-linux-gnu.so.p/meson-generated_localtrack.c.o.d -o dipy/tracking/localtrack.cpython-312-aarch64-linux-gnu.so.p/meson-generated_localtrack.c.o -c dipy/tracking/localtrack.cpython-312-aarch64-linux-gnu.so.p/localtrack.c [72/123] cc -Idipy/segment/clusteringspeed.cpython-312-aarch64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/clusteringspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -MF dipy/segment/clusteringspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o.d -o dipy/segment/clusteringspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -c dipy/segment/clusteringspeed.cpython-312-aarch64-linux-gnu.so.p/clusteringspeed.c [73/123] cc -o dipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so dipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so.p/meson-generated_bundlemin.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [74/123] cc -o dipy/align/crosscorr.cpython-312-aarch64-linux-gnu.so dipy/align/crosscorr.cpython-312-aarch64-linux-gnu.so.p/meson-generated_crosscorr.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [75/123] cc -o dipy/align/expectmax.cpython-312-aarch64-linux-gnu.so dipy/align/expectmax.cpython-312-aarch64-linux-gnu.so.p/meson-generated_expectmax.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [76/123] cc -o dipy/align/parzenhist.cpython-312-aarch64-linux-gnu.so dipy/align/parzenhist.cpython-312-aarch64-linux-gnu.so.p/meson-generated_parzenhist.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [77/123] cc -o dipy/align/sumsqdiff.cpython-312-aarch64-linux-gnu.so dipy/align/sumsqdiff.cpython-312-aarch64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [78/123] cc -o dipy/align/transforms.cpython-312-aarch64-linux-gnu.so dipy/align/transforms.cpython-312-aarch64-linux-gnu.so.p/meson-generated_transforms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [79/123] cc -o dipy/core/interpolation.cpython-312-aarch64-linux-gnu.so dipy/core/interpolation.cpython-312-aarch64-linux-gnu.so.p/meson-generated_interpolation.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [80/123] cc -o dipy/denoise/denspeed.cpython-312-aarch64-linux-gnu.so dipy/denoise/denspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_denspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [81/123] cc -o dipy/denoise/enhancement_kernel.cpython-312-aarch64-linux-gnu.so dipy/denoise/enhancement_kernel.cpython-312-aarch64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [82/123] cc -o dipy/denoise/nlmeans_block.cpython-312-aarch64-linux-gnu.so dipy/denoise/nlmeans_block.cpython-312-aarch64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [83/123] cc -o dipy/denoise/pca_noise_estimate.cpython-312-aarch64-linux-gnu.so dipy/denoise/pca_noise_estimate.cpython-312-aarch64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [84/123] cc -Idipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_propspeed.c.o -MF dipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_propspeed.c.o.d -o dipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_propspeed.c.o -c dipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so.p/propspeed.c [85/123] cc -o dipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so dipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [86/123] cc -Idipy/utils/omp.cpython-312-aarch64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/utils/omp.cpython-312-aarch64-linux-gnu.so.p/meson-generated_omp.c.o -MF dipy/utils/omp.cpython-312-aarch64-linux-gnu.so.p/meson-generated_omp.c.o.d -o dipy/utils/omp.cpython-312-aarch64-linux-gnu.so.p/meson-generated_omp.c.o -c dipy/utils/omp.cpython-312-aarch64-linux-gnu.so.p/omp.c [87/123] cc -o dipy/direction/closest_peak_direction_getter.cpython-312-aarch64-linux-gnu.so dipy/direction/closest_peak_direction_getter.cpython-312-aarch64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [88/123] cc -o dipy/direction/bootstrap_direction_getter.cpython-312-aarch64-linux-gnu.so dipy/direction/bootstrap_direction_getter.cpython-312-aarch64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [89/123] cc -o dipy/direction/pmf.cpython-312-aarch64-linux-gnu.so dipy/direction/pmf.cpython-312-aarch64-linux-gnu.so.p/meson-generated_pmf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [90/123] cc -o dipy/direction/probabilistic_direction_getter.cpython-312-aarch64-linux-gnu.so dipy/direction/probabilistic_direction_getter.cpython-312-aarch64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [91/123] cc -o dipy/reconst/eudx_direction_getter.cpython-312-aarch64-linux-gnu.so dipy/reconst/eudx_direction_getter.cpython-312-aarch64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [92/123] cc -o dipy/direction/ptt_direction_getter.cpython-312-aarch64-linux-gnu.so dipy/direction/ptt_direction_getter.cpython-312-aarch64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [93/123] cc -o dipy/reconst/quick_squash.cpython-312-aarch64-linux-gnu.so dipy/reconst/quick_squash.cpython-312-aarch64-linux-gnu.so.p/meson-generated_quick_squash.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [94/123] cc -o dipy/reconst/recspeed.cpython-312-aarch64-linux-gnu.so dipy/reconst/recspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_recspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [95/123] cc -o dipy/segment/clustering_algorithms.cpython-312-aarch64-linux-gnu.so dipy/segment/clustering_algorithms.cpython-312-aarch64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [96/123] cc -o dipy/reconst/vec_val_sum.cpython-312-aarch64-linux-gnu.so dipy/reconst/vec_val_sum.cpython-312-aarch64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [97/123] cc -o dipy/segment/cythonutils.cpython-312-aarch64-linux-gnu.so dipy/segment/cythonutils.cpython-312-aarch64-linux-gnu.so.p/meson-generated_cythonutils.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [98/123] cc -o dipy/segment/clusteringspeed.cpython-312-aarch64-linux-gnu.so dipy/segment/clusteringspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [99/123] cc -o dipy/tracking/localtrack.cpython-312-aarch64-linux-gnu.so dipy/tracking/localtrack.cpython-312-aarch64-linux-gnu.so.p/meson-generated_localtrack.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [100/123] cc -o dipy/tracking/direction_getter.cpython-312-aarch64-linux-gnu.so dipy/tracking/direction_getter.cpython-312-aarch64-linux-gnu.so.p/meson-generated_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [101/123] cc -o dipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so dipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_propspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [102/123] cc -o dipy/utils/omp.cpython-312-aarch64-linux-gnu.so dipy/utils/omp.cpython-312-aarch64-linux-gnu.so.p/meson-generated_omp.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [103/123] cc -o dipy/utils/fast_numpy.cpython-312-aarch64-linux-gnu.so dipy/utils/fast_numpy.cpython-312-aarch64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [104/123] cc -Idipy/segment/featurespeed.cpython-312-aarch64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/featurespeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_featurespeed.c.o -MF dipy/segment/featurespeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_featurespeed.c.o.d -o dipy/segment/featurespeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_featurespeed.c.o -c dipy/segment/featurespeed.cpython-312-aarch64-linux-gnu.so.p/featurespeed.c [105/123] cc -o dipy/segment/featurespeed.cpython-312-aarch64-linux-gnu.so dipy/segment/featurespeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_featurespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [106/123] cc -Idipy/segment/mrf.cpython-312-aarch64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/mrf.cpython-312-aarch64-linux-gnu.so.p/meson-generated_mrf.c.o -MF dipy/segment/mrf.cpython-312-aarch64-linux-gnu.so.p/meson-generated_mrf.c.o.d -o dipy/segment/mrf.cpython-312-aarch64-linux-gnu.so.p/meson-generated_mrf.c.o -c dipy/segment/mrf.cpython-312-aarch64-linux-gnu.so.p/mrf.c [107/123] cc -o dipy/segment/mrf.cpython-312-aarch64-linux-gnu.so dipy/segment/mrf.cpython-312-aarch64-linux-gnu.so.p/meson-generated_mrf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [108/123] cc -Idipy/segment/metricspeed.cpython-312-aarch64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/metricspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_metricspeed.c.o -MF dipy/segment/metricspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_metricspeed.c.o.d -o dipy/segment/metricspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_metricspeed.c.o -c dipy/segment/metricspeed.cpython-312-aarch64-linux-gnu.so.p/metricspeed.c [109/123] cc -o dipy/segment/metricspeed.cpython-312-aarch64-linux-gnu.so dipy/segment/metricspeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_metricspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [110/123] cc -Idipy/tracking/fbcmeasures.cpython-312-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/fbcmeasures.cpython-312-aarch64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -MF dipy/tracking/fbcmeasures.cpython-312-aarch64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o.d -o dipy/tracking/fbcmeasures.cpython-312-aarch64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -c dipy/tracking/fbcmeasures.cpython-312-aarch64-linux-gnu.so.p/fbcmeasures.c [111/123] cc -o dipy/tracking/fbcmeasures.cpython-312-aarch64-linux-gnu.so 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-I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/streamlinespeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -MF dipy/tracking/streamlinespeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o.d -o dipy/tracking/streamlinespeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -c dipy/tracking/streamlinespeed.cpython-312-aarch64-linux-gnu.so.p/streamlinespeed.c [115/123] cc -o dipy/tracking/streamlinespeed.cpython-312-aarch64-linux-gnu.so dipy/tracking/streamlinespeed.cpython-312-aarch64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [116/123] cc -Idipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so.p -Idipy/utils/tests -I../dipy/utils/tests -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -MF dipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o.d -o dipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -c dipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so.p/test_fast_numpy.c [117/123] cc -o dipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so dipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [118/123] cc -Idipy/tracking/distances.cpython-312-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/distances.cpython-312-aarch64-linux-gnu.so.p/meson-generated_distances.c.o -MF dipy/tracking/distances.cpython-312-aarch64-linux-gnu.so.p/meson-generated_distances.c.o.d -o dipy/tracking/distances.cpython-312-aarch64-linux-gnu.so.p/meson-generated_distances.c.o -c dipy/tracking/distances.cpython-312-aarch64-linux-gnu.so.p/distances.c [119/123] cc -o dipy/tracking/distances.cpython-312-aarch64-linux-gnu.so dipy/tracking/distances.cpython-312-aarch64-linux-gnu.so.p/meson-generated_distances.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [120/123] cc -Idipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -MF dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o.d -o dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -c dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/stopping_criterion.c In file included from /usr/include/string.h:548, from /usr/include/python3.12/Python.h:26, from dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/stopping_criterion.c:16: In function 'memcpy', inlined from '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state' at dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/stopping_criterion.c:29892:3: /usr/include/aarch64-linux-gnu/bits/string_fortified.h:29:10: warning: '*(long unsigned int *)(&__pyx_t_1[0])' may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/stopping_criterion.c: In function '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state': dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/stopping_criterion.c:29866:10: note: '*(long unsigned int *)(&__pyx_t_1[0])' was declared here 29866 | double __pyx_t_1[1]; | ^~~~~~~~~ [121/123] cc -o dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [122/123] cc -Idipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so.p/meson-generated_vector_fields.c.o -MF dipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so.p/meson-generated_vector_fields.c.o.d -o dipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so.p/meson-generated_vector_fields.c.o -c dipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so.p/vector_fields.c [123/123] cc -o dipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so dipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so.p/meson-generated_vector_fields.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [1/526] /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy/version.py [2/526] /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so [3/526] /build/reproducible-path/dipy-1.9.0/.mesonpy-id3t7cz2/dipy/align/crosscorr.cpython-312-aarch64-linux-gnu.so [4/526] 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[517/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_probabilistic.py [518/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_ptt.py [519/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_rumba.py [520/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_sfm.py [521/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_stopping_criterion.py [522/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/viz_advanced.py [523/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/viz_bundles.py [524/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/viz_roi_contour.py [525/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/viz_slice.py [526/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/workflow_creation.py Successfully built dipy-1.9.0-cp312-cp312-linux_aarch64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" module I: pybuild base:311: python3.11 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy --config-setting compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/aarch64-linux-gnu * Building wheel... + meson setup /build/reproducible-path/dipy-1.9.0 /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/aarch64-linux-gnu --native-file=/build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/meson-python-native-file.ini The Meson build system Version: 1.4.1 Source dir: /build/reproducible-path/dipy-1.9.0 Build dir: /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h Build type: native build Project name: dipy Project version: 1.9.0 C compiler for the host machine: cc (gcc 13.2.0 "cc (Debian 13.2.0-25) 13.2.0") C linker for the host machine: cc ld.bfd 2.42 C++ compiler for the host machine: c++ (gcc 13.2.0 "c++ (Debian 13.2.0-25) 13.2.0") C++ linker for the host machine: c++ ld.bfd 2.42 Cython compiler for the host machine: cython (cython 3.0.10) Host machine cpu family: aarch64 Host machine cpu: aarch64 Program python found: YES (/usr/bin/python3.11) Did not find pkg-config by name 'pkg-config' Found pkg-config: NO Run-time dependency python found: YES 3.11 Program cython found: YES (/usr/bin/cython) Library m found: YES Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-format-extra-args: YES Compiler for C++ supports arguments -Wno-format: NO Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Run-time dependency OpenMP found: YES 4.5 Checking if "SSE intrinsics" compiles: NO Checking if "ARM NEON intrinsics" compiles: YES Build targets in project: 45 dipy 1.9.0 User defined options Native files : /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/meson-python-native-file.ini buildtype : release libdir : lib/aarch64-linux-gnu localstatedir: /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload b_ndebug : if-release b_vscrt : md Found ninja-1.12.1 at /usr/bin/ninja Generating targets: 0%| | 0/45 eta ? Writing build.ninja: 0%| | 0/188 eta ? + /usr/bin/ninja --verbose [1/123] /usr/bin/meson --internal copy ../dipy/../src/safe_openmp.pxd dipy/safe_openmp.pxd [2/123] /usr/bin/meson --internal copy ../dipy/__init__.py dipy/__init__.py [3/123] /usr/bin/python3.11 ../dipy/../tools/version_utils.py --source-root .. [4/123] /usr/bin/meson --internal copy ../dipy/../src/cythonutils.h dipy/cythonutils.h [5/123] /usr/bin/meson --internal copy ../dipy/../src/dpy_math.h dipy/dpy_math.h [6/123] /usr/bin/meson --internal copy ../dipy/../src/conditional_omp.h dipy/conditional_omp.h [7/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/enhancement_kernel.cpython-311-aarch64-linux-gnu.so.p/enhancement_kernel.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/denoise/enhancement_kernel.pyx [8/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/nlmeans_block.cpython-311-aarch64-linux-gnu.so.p/nlmeans_block.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/denoise/nlmeans_block.pyx [9/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so.p/pca_noise_estimate.c --include-dir 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dipy/direction/bootstrap_direction_getter.cpython-311-aarch64-linux-gnu.so.p/bootstrap_direction_getter.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/direction/bootstrap_direction_getter.pyx [14/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/denoise/denspeed.cpython-311-aarch64-linux-gnu.so.p/denspeed.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/denoise/denspeed.pyx [15/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/crosscorr.cpython-311-aarch64-linux-gnu.so.p/crosscorr.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/align/crosscorr.pyx [16/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/expectmax.cpython-311-aarch64-linux-gnu.so.p/expectmax.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/align/expectmax.pyx [17/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/transforms.cpython-311-aarch64-linux-gnu.so.p/transforms.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/align/transforms.pyx [18/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/pmf.cpython-311-aarch64-linux-gnu.so.p/pmf.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/direction/pmf.pyx [19/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/closest_peak_direction_getter.cpython-311-aarch64-linux-gnu.so.p/closest_peak_direction_getter.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/direction/closest_peak_direction_getter.pyx [20/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/core/interpolation.cpython-311-aarch64-linux-gnu.so.p/interpolation.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/core/interpolation.pyx [21/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/quick_squash.cpython-311-aarch64-linux-gnu.so.p/quick_squash.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/reconst/quick_squash.pyx [22/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/eudx_direction_getter.cpython-311-aarch64-linux-gnu.so.p/eudx_direction_getter.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/reconst/eudx_direction_getter.pyx [23/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/ptt_direction_getter.cpython-311-aarch64-linux-gnu.so.p/ptt_direction_getter.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/direction/ptt_direction_getter.pyx [24/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/sumsqdiff.cpython-311-aarch64-linux-gnu.so.p/sumsqdiff.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/align/sumsqdiff.pyx [25/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/direction/probabilistic_direction_getter.cpython-311-aarch64-linux-gnu.so.p/probabilistic_direction_getter.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/direction/probabilistic_direction_getter.pyx [26/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/recspeed.cpython-311-aarch64-linux-gnu.so.p/recspeed.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/reconst/recspeed.pyx [27/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/cythonutils.cpython-311-aarch64-linux-gnu.so.p/cythonutils.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/segment/cythonutils.pyx [28/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/reconst/vec_val_sum.cpython-311-aarch64-linux-gnu.so.p/vec_val_sum.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/reconst/vec_val_sum.pyx [29/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so.p/featurespeed.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/segment/featurespeed.pyx [30/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/distances.cpython-311-aarch64-linux-gnu.so.p/distances.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/tracking/distances.pyx [31/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/clustering_algorithms.cpython-311-aarch64-linux-gnu.so.p/clustering_algorithms.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/segment/clustering_algorithms.pyx [32/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/mrf.cpython-311-aarch64-linux-gnu.so.p/mrf.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/segment/mrf.pyx [33/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/omp.cpython-311-aarch64-linux-gnu.so.p/omp.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/utils/omp.pyx [34/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so.p/clusteringspeed.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/segment/clusteringspeed.pyx [35/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so.p/metricspeed.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/segment/metricspeed.pyx [36/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so.p/propspeed.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/tracking/propspeed.pyx [37/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so.p/localtrack.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/tracking/localtrack.pyx [38/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so.p/fbcmeasures.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/tracking/fbcmeasures.pyx [39/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so.p/streamlinespeed.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/tracking/streamlinespeed.pyx [40/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/fast_numpy.cpython-311-aarch64-linux-gnu.so.p/fast_numpy.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/utils/fast_numpy.pyx [41/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/direction_getter.cpython-311-aarch64-linux-gnu.so.p/direction_getter.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/tracking/direction_getter.pyx [42/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so.p/vox2track.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/tracking/vox2track.pyx [43/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/stopping_criterion.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/tracking/stopping_criterion.pyx [44/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so.p/test_fast_numpy.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/utils/tests/test_fast_numpy.pyx [45/123] /usr/bin/cython -3 --fast-fail --warning-errors --output-file dipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so.p/vector_fields.c --include-dir /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy ../dipy/align/vector_fields.pyx [46/123] cc -Idipy/denoise/nlmeans_block.cpython-311-aarch64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/enhancement_kernel.cpython-311-aarch64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -MF dipy/denoise/enhancement_kernel.cpython-311-aarch64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o.d -o dipy/denoise/enhancement_kernel.cpython-311-aarch64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -c dipy/denoise/enhancement_kernel.cpython-311-aarch64-linux-gnu.so.p/enhancement_kernel.c [52/123] cc -Idipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -MF dipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o.d -o dipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -c dipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so.p/pca_noise_estimate.c [53/123] cc -Idipy/denoise/denspeed.cpython-311-aarch64-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/parzenhist.cpython-311-aarch64-linux-gnu.so.p/meson-generated_parzenhist.c.o -MF dipy/align/parzenhist.cpython-311-aarch64-linux-gnu.so.p/meson-generated_parzenhist.c.o.d -o dipy/align/parzenhist.cpython-311-aarch64-linux-gnu.so.p/meson-generated_parzenhist.c.o -c dipy/align/parzenhist.cpython-311-aarch64-linux-gnu.so.p/parzenhist.c [55/123] cc -Idipy/direction/probabilistic_direction_getter.cpython-311-aarch64-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong 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-mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/mrf.cpython-311-aarch64-linux-gnu.so.p/meson-generated_mrf.c.o -MF dipy/segment/mrf.cpython-311-aarch64-linux-gnu.so.p/meson-generated_mrf.c.o.d -o dipy/segment/mrf.cpython-311-aarch64-linux-gnu.so.p/meson-generated_mrf.c.o -c dipy/segment/mrf.cpython-311-aarch64-linux-gnu.so.p/mrf.c [72/123] cc -o dipy/align/bundlemin.cpython-311-aarch64-linux-gnu.so dipy/align/bundlemin.cpython-311-aarch64-linux-gnu.so.p/meson-generated_bundlemin.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [73/123] cc -o dipy/align/crosscorr.cpython-311-aarch64-linux-gnu.so dipy/align/crosscorr.cpython-311-aarch64-linux-gnu.so.p/meson-generated_crosscorr.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [74/123] cc -o dipy/align/expectmax.cpython-311-aarch64-linux-gnu.so dipy/align/expectmax.cpython-311-aarch64-linux-gnu.so.p/meson-generated_expectmax.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [75/123] cc -Idipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -MF dipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o.d -o dipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -c dipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so.p/clusteringspeed.c [76/123] cc -o dipy/align/parzenhist.cpython-311-aarch64-linux-gnu.so dipy/align/parzenhist.cpython-311-aarch64-linux-gnu.so.p/meson-generated_parzenhist.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [77/123] cc -o dipy/align/sumsqdiff.cpython-311-aarch64-linux-gnu.so dipy/align/sumsqdiff.cpython-311-aarch64-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [78/123] cc -o dipy/align/transforms.cpython-311-aarch64-linux-gnu.so dipy/align/transforms.cpython-311-aarch64-linux-gnu.so.p/meson-generated_transforms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [79/123] cc -o dipy/core/interpolation.cpython-311-aarch64-linux-gnu.so dipy/core/interpolation.cpython-311-aarch64-linux-gnu.so.p/meson-generated_interpolation.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [80/123] cc -o dipy/denoise/denspeed.cpython-311-aarch64-linux-gnu.so dipy/denoise/denspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_denspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [81/123] cc -o dipy/denoise/enhancement_kernel.cpython-311-aarch64-linux-gnu.so dipy/denoise/enhancement_kernel.cpython-311-aarch64-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [82/123] cc -o dipy/denoise/nlmeans_block.cpython-311-aarch64-linux-gnu.so dipy/denoise/nlmeans_block.cpython-311-aarch64-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [83/123] cc -o dipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so dipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [84/123] cc -o dipy/direction/bootstrap_direction_getter.cpython-311-aarch64-linux-gnu.so dipy/direction/bootstrap_direction_getter.cpython-311-aarch64-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [85/123] cc -o dipy/denoise/shift_twist_convolution.cpython-311-aarch64-linux-gnu.so dipy/denoise/shift_twist_convolution.cpython-311-aarch64-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [86/123] cc -o dipy/direction/closest_peak_direction_getter.cpython-311-aarch64-linux-gnu.so dipy/direction/closest_peak_direction_getter.cpython-311-aarch64-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [87/123] cc -Idipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_featurespeed.c.o -MF dipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_featurespeed.c.o.d -o dipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_featurespeed.c.o -c dipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so.p/featurespeed.c [88/123] cc -o dipy/direction/pmf.cpython-311-aarch64-linux-gnu.so dipy/direction/pmf.cpython-311-aarch64-linux-gnu.so.p/meson-generated_pmf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [89/123] cc -Idipy/utils/omp.cpython-311-aarch64-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/utils/omp.cpython-311-aarch64-linux-gnu.so.p/meson-generated_omp.c.o -MF dipy/utils/omp.cpython-311-aarch64-linux-gnu.so.p/meson-generated_omp.c.o.d -o dipy/utils/omp.cpython-311-aarch64-linux-gnu.so.p/meson-generated_omp.c.o -c dipy/utils/omp.cpython-311-aarch64-linux-gnu.so.p/omp.c [90/123] cc -o dipy/direction/probabilistic_direction_getter.cpython-311-aarch64-linux-gnu.so dipy/direction/probabilistic_direction_getter.cpython-311-aarch64-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [91/123] cc -o dipy/direction/ptt_direction_getter.cpython-311-aarch64-linux-gnu.so dipy/direction/ptt_direction_getter.cpython-311-aarch64-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [92/123] cc -o dipy/reconst/eudx_direction_getter.cpython-311-aarch64-linux-gnu.so dipy/reconst/eudx_direction_getter.cpython-311-aarch64-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [93/123] cc -o dipy/reconst/quick_squash.cpython-311-aarch64-linux-gnu.so dipy/reconst/quick_squash.cpython-311-aarch64-linux-gnu.so.p/meson-generated_quick_squash.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [94/123] cc -o dipy/reconst/recspeed.cpython-311-aarch64-linux-gnu.so dipy/reconst/recspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_recspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [95/123] cc -o dipy/reconst/vec_val_sum.cpython-311-aarch64-linux-gnu.so dipy/reconst/vec_val_sum.cpython-311-aarch64-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [96/123] cc -o dipy/segment/clustering_algorithms.cpython-311-aarch64-linux-gnu.so dipy/segment/clustering_algorithms.cpython-311-aarch64-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [97/123] cc -o dipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so dipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [98/123] cc -o dipy/segment/cythonutils.cpython-311-aarch64-linux-gnu.so dipy/segment/cythonutils.cpython-311-aarch64-linux-gnu.so.p/meson-generated_cythonutils.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [99/123] cc -o dipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so dipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_featurespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [100/123] cc -o dipy/segment/mrf.cpython-311-aarch64-linux-gnu.so dipy/segment/mrf.cpython-311-aarch64-linux-gnu.so.p/meson-generated_mrf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [101/123] cc -o dipy/tracking/direction_getter.cpython-311-aarch64-linux-gnu.so dipy/tracking/direction_getter.cpython-311-aarch64-linux-gnu.so.p/meson-generated_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [102/123] cc -o dipy/utils/fast_numpy.cpython-311-aarch64-linux-gnu.so dipy/utils/fast_numpy.cpython-311-aarch64-linux-gnu.so.p/meson-generated_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [103/123] cc -o dipy/utils/omp.cpython-311-aarch64-linux-gnu.so dipy/utils/omp.cpython-311-aarch64-linux-gnu.so.p/meson-generated_omp.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [104/123] cc -Idipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_propspeed.c.o -MF dipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_propspeed.c.o.d -o dipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_propspeed.c.o -c dipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so.p/propspeed.c [105/123] cc -o dipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so dipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_propspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [106/123] cc -Idipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so.p/meson-generated_localtrack.c.o -MF dipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so.p/meson-generated_localtrack.c.o.d -o dipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so.p/meson-generated_localtrack.c.o -c dipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so.p/localtrack.c [107/123] cc -o dipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so dipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so.p/meson-generated_localtrack.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [108/123] cc -Idipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_metricspeed.c.o -MF dipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_metricspeed.c.o.d -o dipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_metricspeed.c.o -c dipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so.p/metricspeed.c [109/123] cc -o dipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so dipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_metricspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [110/123] cc -Idipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -MF dipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o.d -o dipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -c dipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so.p/fbcmeasures.c [111/123] cc -o dipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so dipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [112/123] cc -Idipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -MF dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o.d -o dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -c dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/stopping_criterion.c In file included from /usr/include/string.h:548, from /usr/include/python3.11/Python.h:26, from dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/stopping_criterion.c:16: In function 'memcpy', inlined from '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state' at dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/stopping_criterion.c:29892:3: /usr/include/aarch64-linux-gnu/bits/string_fortified.h:29:10: warning: '*(long unsigned int *)(&__pyx_t_1[0])' may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/stopping_criterion.c: In function '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state': dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/stopping_criterion.c:29866:10: note: '*(long unsigned int *)(&__pyx_t_1[0])' was declared here 29866 | double __pyx_t_1[1]; | ^~~~~~~~~ [113/123] cc -o dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [114/123] cc -Idipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so.p/meson-generated_vox2track.c.o -MF dipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so.p/meson-generated_vox2track.c.o.d -o dipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so.p/meson-generated_vox2track.c.o -c dipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so.p/vox2track.c [115/123] cc -o dipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so dipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so.p/meson-generated_vox2track.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [116/123] cc -Idipy/tracking/distances.cpython-311-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/distances.cpython-311-aarch64-linux-gnu.so.p/meson-generated_distances.c.o -MF dipy/tracking/distances.cpython-311-aarch64-linux-gnu.so.p/meson-generated_distances.c.o.d -o dipy/tracking/distances.cpython-311-aarch64-linux-gnu.so.p/meson-generated_distances.c.o -c dipy/tracking/distances.cpython-311-aarch64-linux-gnu.so.p/distances.c [117/123] cc -o dipy/tracking/distances.cpython-311-aarch64-linux-gnu.so dipy/tracking/distances.cpython-311-aarch64-linux-gnu.so.p/meson-generated_distances.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [118/123] cc -Idipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so.p -Idipy/utils/tests -I../dipy/utils/tests -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -MF dipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o.d -o dipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -c dipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so.p/test_fast_numpy.c [119/123] cc -o dipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so dipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so.p/meson-generated_test_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [120/123] cc -Idipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -MF dipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o.d -o dipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -c dipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so.p/streamlinespeed.c [121/123] cc -o dipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so dipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [122/123] cc -Idipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so.p/meson-generated_vector_fields.c.o -MF dipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so.p/meson-generated_vector_fields.c.o.d -o dipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so.p/meson-generated_vector_fields.c.o -c dipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so.p/vector_fields.c [123/123] cc -o dipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so dipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so.p/meson-generated_vector_fields.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -shared -fPIC -lm -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [1/526] /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy/version.py [2/526] /build/reproducible-path/dipy-1.9.0/.mesonpy-5m77tb5h/dipy/align/bundlemin.cpython-311-aarch64-linux-gnu.so [3/526] 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/build/reproducible-path/dipy-1.9.0/dipy/workflows/nn.py [413/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/reconst.py [414/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/segment.py [415/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/stats.py [416/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tracking.py [417/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/viz.py [418/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/workflow.py [419/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/__init__.py [420/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/test_align.py [421/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/test_denoise.py [422/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/test_docstring_parser.py [423/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/test_iap.py [424/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/test_io.py [425/526] 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/build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/test_tracking.py [437/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/test_viz.py [438/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/test_workflow.py [439/526] /build/reproducible-path/dipy-1.9.0/dipy/workflows/tests/workflow_tests_utils.py [440/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/affine_registration_3d.py [441/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/affine_registration_masks.py [442/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/afq_tract_profiles.py [443/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/brain_extraction_dwi.py [444/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/bundle_assignment_maps.py [445/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/bundle_extraction.py [446/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/bundle_group_registration.py [447/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/bundle_registration.py [448/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/bundle_shape_similarity.py [449/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/bundlewarp_registration.py [450/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/cluster_confidence.py [451/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/combined_workflow_creation.py [452/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/contextual_enhancement.py [453/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/denoise_ascm.py [454/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/denoise_gibbs.py [455/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/denoise_localpca.py [456/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/denoise_mppca.py [457/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/denoise_nlmeans.py [458/526] 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/build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_csa.py [470/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_csa_parallel.py [471/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_csd.py [472/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_csd_parallel.py [473/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_cti.py [474/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_dki.py [475/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_dki_micro.py [476/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_dsi.py [477/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_dsi_metrics.py [478/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_dsid.py [479/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_dti.py [480/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_forecast.py [481/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_fwdti.py [482/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_gqi.py [483/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_ivim.py [484/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_mapmri.py [485/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_mcsd.py [486/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_msdki.py [487/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_qtdmri.py [488/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_qti.py [489/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_qtiplus.py [490/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_rumba.py [491/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_sfm.py [492/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_sh.py [493/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_shore.py [494/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reconst_shore_metrics.py [495/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/register_binary_fuzzy.py [496/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/reslice_datasets.py [497/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/restore_dti.py [498/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/segment_clustering_features.py [499/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/segment_clustering_metrics.py [500/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/segment_extending_clustering_framework.py [501/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/segment_quickbundles.py [502/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/simulate_dki.py [503/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/simulate_multi_tensor.py [504/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/snr_in_cc.py [505/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/streamline_formats.py [506/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/streamline_length.py [507/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/streamline_registration.py [508/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/streamline_tools.py [509/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/surface_seed.py [510/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/syn_registration_2d.py [511/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/syn_registration_3d.py [512/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tissue_classification.py [513/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_bootstrap_peaks.py [514/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_deterministic.py [515/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_introduction_eudx.py [516/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_pft.py [517/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_probabilistic.py [518/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_ptt.py [519/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_rumba.py [520/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_sfm.py [521/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/tracking_stopping_criterion.py [522/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/viz_advanced.py [523/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/viz_bundles.py [524/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/viz_roi_contour.py [525/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/viz_slice.py [526/526] /build/reproducible-path/dipy-1.9.0/dipy/../doc/examples/workflow_creation.py Successfully built dipy-1.9.0-cp311-cp311-linux_aarch64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.11 with "installer" module find -name func_coef.nii.gz -print -exec chmod 0644 '{}' ';' ./.pybuild/cpython3_3.11_dipy/build/dipy/data/files/func_coef.nii.gz ./.pybuild/cpython3_3.12_dipy/build/dipy/data/files/func_coef.nii.gz ./dipy/data/files/func_coef.nii.gz make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' # Do not test just after build, lets install and then test make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir I: pybuild plugin_pyproject:178: Copying package built for python3.11 to destdir debian/rules execute_after_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' py3versions: no X-Python3-Version in control file, using supported versions # Prune duplicate LICENSE file find debian/ -name LICENSE -delete # Only now lets build docs cd doc/ \ && PYTHONPATH=/build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build \ /usr/bin/make html SPHINXOPTS="-D today=\"May 22, 2024\"" make[2]: Entering directory '/build/reproducible-path/dipy-1.9.0/doc' tools/build_modref_templates.py dipy reference /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/__init__.py:22: UserWarning: You do not have FURY installed. Therefore, 3D visualization functions will not work for you. Please install or upgrade FURY using pip install -U furyFor detailed installation instructions visit: https://fury.gl/ warnings.warn( WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos Generating docs for dipy: -> dipy Generating docs for dipy.align: -> dipy.align -> dipy.align._public /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py 718 -> dipy.align.cpd -> dipy.align.imaffine -> dipy.align.imwarp -> dipy.align.metrics -> dipy.align.reslice -> dipy.align.scalespace -> dipy.align.streamlinear -> dipy.align.streamwarp Generating docs for dipy.core: -> dipy.core WARNING: Empty - dipy.core -> dipy.core.geometry -> dipy.core.gradients -> dipy.core.graph -> dipy.core.histeq -> dipy.core.ndindex -> dipy.core.onetime -> dipy.core.optimize -> dipy.core.profile -> dipy.core.rng -> dipy.core.sphere -> dipy.core.sphere_stats -> dipy.core.subdivide_octahedron -> dipy.core.wavelet Generating docs for dipy.data: -> dipy.data -> dipy.data.fetcher Generating docs for dipy.denoise: -> dipy.denoise WARNING: Empty - dipy.denoise -> dipy.denoise.adaptive_soft_matching -> dipy.denoise.gibbs -> dipy.denoise.localpca -> dipy.denoise.nlmeans -> dipy.denoise.noise_estimate -> dipy.denoise.non_local_means -> dipy.denoise.patch2self Generating docs for dipy.direction: -> dipy.direction WARNING: Empty - dipy.direction -> dipy.direction.peaks Generating docs for dipy.io: -> dipy.io WARNING: Empty - dipy.io -> dipy.io.dpy -> dipy.io.gradients -> dipy.io.image -> dipy.io.peaks -> dipy.io.pickles -> dipy.io.stateful_tractogram -> dipy.io.streamline -> dipy.io.surface -> dipy.io.utils -> dipy.io.vtk Generating docs for dipy.nn: -> dipy.nn WARNING: Empty - dipy.nn -> dipy.nn.cnn_1d_denoising -> dipy.nn.deepn4 -> dipy.nn.evac -> dipy.nn.histo_resdnn -> dipy.nn.model -> dipy.nn.synb0 -> dipy.nn.utils Generating docs for dipy.reconst: -> dipy.reconst WARNING: Empty - dipy.reconst -> dipy.reconst.base -> dipy.reconst.cache -> dipy.reconst.cross_validation -> dipy.reconst.csdeconv -> dipy.reconst.cti -> dipy.reconst.dki -> dipy.reconst.dki_micro -> dipy.reconst.dsi -> dipy.reconst.dti -> dipy.reconst.forecast -> dipy.reconst.fwdti -> dipy.reconst.gqi -> dipy.reconst.ivim -> dipy.reconst.mapmri -> dipy.reconst.mcsd -> dipy.reconst.msdki -> dipy.reconst.multi_voxel -> dipy.reconst.odf -> dipy.reconst.qtdmri -> dipy.reconst.qti -> dipy.reconst.rumba -> dipy.reconst.sfm -> dipy.reconst.shm -> dipy.reconst.shore -> dipy.reconst.utils Generating docs for dipy.segment: -> dipy.segment WARNING: Empty - dipy.segment -> dipy.segment.bundles -> dipy.segment.clustering -> dipy.segment.fss -> dipy.segment.mask -> dipy.segment.metric -> dipy.segment.threshold -> dipy.segment.tissue Generating docs for dipy.sims: -> dipy.sims WARNING: Empty - dipy.sims -> dipy.sims.phantom -> dipy.sims.voxel Generating docs for dipy.stats: -> dipy.stats WARNING: Empty - dipy.stats -> dipy.stats.analysis Generating docs for dipy.tracking: -> dipy.tracking WARNING: Empty - dipy.tracking -> dipy.tracking._utils WARNING: Empty - dipy.tracking._utils -> dipy.tracking.learning -> dipy.tracking.life -> dipy.tracking.local_tracking -> dipy.tracking.mesh -> dipy.tracking.metrics -> dipy.tracking.streamline -> dipy.tracking.utils Generating docs for dipy.version: -> dipy.version WARNING: Empty - dipy.version Generating docs for dipy.viz: -> dipy.viz WARNING: Empty - dipy.viz -> dipy.viz.gmem -> dipy.viz.horizon WARNING: Empty - dipy.viz.horizon -> dipy.viz.horizon.app -> dipy.viz.horizon.tab WARNING: Empty - dipy.viz.horizon.tab -> dipy.viz.horizon.tab.base -> dipy.viz.horizon.tab.cluster -> dipy.viz.horizon.tab.peak -> dipy.viz.horizon.tab.roi -> dipy.viz.horizon.tab.slice -> dipy.viz.horizon.tab.surface -> dipy.viz.horizon.util -> dipy.viz.horizon.visualizer WARNING: Empty - dipy.viz.horizon.visualizer -> dipy.viz.horizon.visualizer.cluster -> dipy.viz.horizon.visualizer.peak -> dipy.viz.horizon.visualizer.slice -> dipy.viz.horizon.visualizer.surface -> dipy.viz.panel -> dipy.viz.plotting -> dipy.viz.projections -> dipy.viz.regtools -> dipy.viz.streamline Generating docs for dipy.workflows: -> dipy.workflows WARNING: Empty - dipy.workflows -> dipy.workflows.align -> dipy.workflows.base -> dipy.workflows.cli -> dipy.workflows.combined_workflow -> dipy.workflows.denoise -> dipy.workflows.docstring_parser -> dipy.workflows.flow_runner -> dipy.workflows.io -> dipy.workflows.mask -> dipy.workflows.multi_io -> dipy.workflows.nn -> dipy.workflows.reconst -> dipy.workflows.segment -> dipy.workflows.stats -> dipy.workflows.tracking -> dipy.workflows.viz -> dipy.workflows.workflow 16 files written tools/docgen_cmd.py dipy reference_cmd /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/__init__.py:22: UserWarning: You do not have FURY installed. Therefore, 3D visualization functions will not work for you. Please install or upgrade FURY using pip install -U furyFor detailed installation instructions visit: https://fury.gl/ warnings.warn( WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos Generating docs for: dipy_align_affine (ImageRegistrationFlow) Done Generating docs for: dipy_align_syn (SynRegistrationFlow) Done Generating docs for: dipy_apply_transform (ApplyTransformFlow) Done Generating docs for: dipy_buan_lmm (LinearMixedModelsFlow) Done Generating docs for: dipy_buan_shapes (BundleShapeAnalysis) Done Generating docs for: dipy_buan_profiles (BundleAnalysisTractometryFlow) Done Generating docs for: dipy_bundlewarp (BundleWarpFlow) Done Generating docs for: dipy_correct_motion (MotionCorrectionFlow) Done Generating docs for: dipy_convert_tractogram (ConvertTractogramFlow) Done Generating docs for: dipy_convert_tensors (ConvertTensorsFlow) Done Generating docs for: dipy_denoise_nlmeans (NLMeansFlow) Done Generating docs for: dipy_denoise_lpca (LPCAFlow) Done Generating docs for: dipy_denoise_mppca (MPPCAFlow) Done Generating docs for: dipy_denoise_patch2self (Patch2SelfFlow) Done Generating docs for: dipy_evac_plus (EVACPlusFlow) Done Generating docs for: dipy_fetch (FetchFlow) Done Generating docs for: dipy_fit_csa (ReconstCSAFlow) Done Generating docs for: dipy_fit_csd (ReconstCSDFlow) Done Generating docs for: dipy_fit_dki (ReconstDkiFlow) Done Generating docs for: dipy_fit_dti (ReconstDtiFlow) Done Generating docs for: dipy_fit_dsi (ReconstDsiFlow) Done Generating docs for: dipy_fit_ivim (ReconstIvimFlow) Done Generating docs for: dipy_fit_mapmri (ReconstMAPMRIFlow) Done Generating docs for: dipy_mask (MaskFlow) Done Generating docs for: dipy_gibbs_ringing (GibbsRingingFlow) Done Generating docs for: dipy_horizon (HorizonFlow) Done Generating docs for: dipy_info (IoInfoFlow) Done Generating docs for: dipy_concatenate_tractograms (ConcatenateTractogramFlow) Done Generating docs for: dipy_labelsbundles (LabelsBundlesFlow) Done Generating docs for: dipy_median_otsu (MedianOtsuFlow) Done Generating docs for: dipy_recobundles (RecoBundlesFlow) Done Generating docs for: dipy_reslice (ResliceFlow) Done Generating docs for: dipy_sh_convert_mrtrix (ConvertSHFlow) Done Generating docs for: dipy_snr_in_cc (SNRinCCFlow) Done Generating docs for: dipy_split (SplitFlow) Done Generating docs for: dipy_track (LocalFiberTrackingPAMFlow) Done Generating docs for: dipy_track_pft (PFTrackingPAMFlow) Done Generating docs for: dipy_slr (SlrWithQbxFlow) Done Generating index.rst Done Build API docs...done. # Standard html build after examples have been prepared sphinx-build -b html -d _build/doctrees -D today="May 22, 2024" . _build/html Running Sphinx v7.2.6 Initializing Examples folder revamp plugin... Initializing GitHub plugin making output directory... done [autosummary] generating autosummary for: api_changes.rst, cite.rst, devel/benchmarking.rst, devel/coding_style_guideline.rst, devel/commit_codes.rst, devel/gitwash/configure_git.rst, devel/gitwash/development_workflow.rst, devel/gitwash/dot2_dot3.rst, devel/gitwash/following_latest.rst, devel/gitwash/forking_hell.rst, ..., theory/sh_basis.rst, theory/spherical.rst, user_guide/data.rst, user_guide/dataset_list.rst, user_guide/dependencies.rst, user_guide/getting_started.rst, user_guide/index.rst, user_guide/installation.rst, user_guide/introduction.rst, user_guide/mission.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/__init__.py:22: UserWarning: You do not have FURY installed. Therefore, 3D visualization functions will not work for you. Please install or upgrade FURY using pip install -U furyFor detailed installation instructions visit: https://fury.gl/ warnings.warn( WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 138 source files that are out of date updating environment: [new config] 138 added, 0 changed, 0 removed reading sources... [ 1%] api_changes reading sources... [ 1%] cite reading sources... [ 2%] devel/benchmarking reading sources... [ 3%] devel/coding_style_guideline reading sources... [ 4%] devel/commit_codes reading sources... [ 4%] devel/gitwash/configure_git reading sources... [ 5%] devel/gitwash/development_workflow reading sources... [ 6%] devel/gitwash/dot2_dot3 reading sources... [ 7%] devel/gitwash/following_latest reading sources... [ 7%] devel/gitwash/forking_hell reading sources... [ 8%] devel/gitwash/git_development reading sources... [ 9%] devel/gitwash/git_install reading sources... [ 9%] devel/gitwash/git_intro reading sources... 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See "backrefs" attribute for IDs. links_names.inc:80: WARNING: Duplicate explicit target name: "cython". /build/reproducible-path/dipy-1.9.0/doc/devel/make_release.rst:123: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/doc/devel/toolchain.rst:39: WARNING: Mismatch: both interpreted text role prefix and reference suffix. /build/reproducible-path/dipy-1.9.0/doc/gimbal_lock.rst:27: WARNING: image file not readable: images/spitfire_0.png /build/reproducible-path/dipy-1.9.0/doc/gimbal_lock.rst:32: WARNING: image file not readable: images/spitfire_x.png /build/reproducible-path/dipy-1.9.0/doc/gimbal_lock.rst:37: WARNING: image file not readable: images/spitfire_y.png /build/reproducible-path/dipy-1.9.0/doc/gimbal_lock.rst:42: WARNING: image file not readable: images/spitfire_hoped.png /build/reproducible-path/dipy-1.9.0/doc/index.rst:99: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/doc/index.rst:119: WARNING: toctree contains reference to nonexisting document 'examples_built/index' /build/reproducible-path/dipy-1.9.0/doc/interfaces/buan_flow.rst:290: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/basic_flow.rst /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundle_segmentation_flow.rst:118: WARNING: duplicate citation Yeh18, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/buan_flow.rst /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundle_segmentation_flow.rst:128: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/buan_flow.rst /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundlewarp_registration_flow.rst:52: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundlewarp_registration_flow.rst:113: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundle_segmentation_flow.rst /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:62: ERROR: Error in "image" directive: no content permitted. image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_original.png?raw=true :align: middle /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:62: WARNING: Substitution definition "image1" empty or invalid. .. |image1| image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_original.png?raw=true :align: middle /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:65: ERROR: Error in "image" directive: no content permitted. image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_denoise_LPCA.png?raw=true :align: middle /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:65: WARNING: Substitution definition "image2" empty or invalid. .. |image2| image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_denoise_LPCA.png?raw=true :align: middle /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:142: WARNING: Literal block expected; none found. /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:72: ERROR: Undefined substitution referenced: "image1". /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:72: ERROR: Undefined substitution referenced: "image2". /build/reproducible-path/dipy-1.9.0/doc/interfaces/registration_flow.rst:106: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/doc/interfaces/registration_flow.rst:163: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundle_segmentation_flow.rst /build/reproducible-path/dipy-1.9.0/doc/interfaces/tracking_flow.rst:204: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/basic_flow.rst /build/reproducible-path/dipy-1.9.0/doc/recipes.rst:31: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/doc/recipes.rst:41: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:: ERROR: Anonymous hyperlink mismatch: 1 references but 0 targets. See "backrefs" attribute for IDs. /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst:39::1: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst:73::1: WARNING: Inline strong start-string without end-string. WARNING: Failed to get a function signature for dipy.align.VerbosityLevels: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public.write_mapping:7: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.align._public._METHOD_DICT: {'center_of_mass': (functools.partial(, pipeline=['center_of_mass']), None), 'translation': (functools.partial(, pipeline=['translation']), ), 'rigid_isoscaling': (functools.partial(, pipeline=['rigid_isoscaling']), ), 'rigid_scaling': (functools.partial(, pipeline=['rigid_scaling']), ), 'rigid': (functools.partial(, pipeline=['rigid']), ), 'affine': (functools.partial(, pipeline=['affine']), )} is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:3: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:8: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine.AffineMap.transform:37: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine.AffineMap.transform_inverse:37: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine.AffineRegistration.optimize:38: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.align.imaffine._transform_method: {(2, 'nearest'): , (3, 'nearest'): , (2, 'linear'): , (3, 'linear'): } is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:3: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:8: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imwarp.py:docstring of dipy.align.imwarp.SymmetricDiffeomorphicRegistration.update:29: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.align.imwarp.RegistrationStages: is not a callable object WARNING: Failed to get a function signature for dipy.align.imwarp.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/metrics.py:docstring of dipy.align.metrics.v_cycle_3d:9: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.align.scalespace.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:50: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:51: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:79: WARNING: Duplicate explicit target name: "garyfallidis14". WARNING: Failed to get a function signature for dipy.align.streamlinear.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:18: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:37: WARNING: Duplicate explicit target name: "garyfallidis15". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:62: WARNING: Duplicate explicit target name: "garyfallidis15". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:63: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:66: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:67: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:67: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:68: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:43: WARNING: Duplicate explicit target name: "garyfallidis15". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:44: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:47: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:48: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:48: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:49: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamwarp.py:docstring of dipy.align.streamwarp.bundlewarp_vector_filed:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:66: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.bundle_min_distance_fast:32: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:28: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:47: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.BundleMinDistanceMetric:12: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundlewarp_registration_flow.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:75: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/registration_flow.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:79: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:82: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundle_segmentation_flow.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:37: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:62: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:67: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:43: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:48: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamwarp.py:docstring of dipy.align.streamwarp.bundlewarp:49: WARNING: duplicate citation Chandio2023, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundlewarp_registration_flow.rst /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.core.rst:42::1: WARNING: Inline strong start-string without end-string. WARNING: Failed to get a function signature for dipy.core.geometry._TUPLE2AXES: {(0, 0, 0, 0): 'sxyz', (0, 0, 1, 0): 'sxyx', (0, 1, 0, 0): 'sxzy', (0, 1, 1, 0): 'sxzx', (1, 0, 0, 0): 'syzx', (1, 0, 1, 0): 'syzy', (1, 1, 0, 0): 'syxz', (1, 1, 1, 0): 'syxy', (2, 0, 0, 0): 'szxy', (2, 0, 1, 0): 'szxz', (2, 1, 0, 0): 'szyx', (2, 1, 1, 0): 'szyz', (0, 0, 0, 1): 'rzyx', (0, 0, 1, 1): 'rxyx', (0, 1, 0, 1): 'ryzx', (0, 1, 1, 1): 'rxzx', (1, 0, 0, 1): 'rxzy', (1, 0, 1, 1): 'ryzy', (1, 1, 0, 1): 'rzxy', (1, 1, 1, 1): 'ryxy', (2, 0, 0, 1): 'ryxz', (2, 0, 1, 1): 'rzxz', (2, 1, 0, 1): 'rxyz', (2, 1, 1, 1): 'rzyz'} is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:3: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:8: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry.perpendicular_directions:32: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry.perpendicular_directions:34: WARNING: Bullet list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.core.gradients.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.gradient_table_from_bvals_bvecs:41: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.reorient_bvecs:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.params_to_btens:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.params_to_btens:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:61: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:69: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:88: WARNING: Block quote ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.core.sphere.octahedron_vertices: array([[ 1., 0., 0.], [-1., 0., 0.], [ 0., 1., 0.], [ 0., -1., 0.], [ 0., 0., 1.], [ 0., 0., -1.]]) is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.octahedron_faces: array([[0, 4, 2], [1, 5, 3], [4, 2, 1], [5, 3, 0], [1, 4, 3], [0, 5, 2], [0, 4, 3], [1, 5, 2]], dtype=uint16) is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.icosahedron_vertices: array([[ 0.85065081, 0.52573111, 0. ], [-0.85065081, 0.52573111, 0. ], [ 0.85065081, -0.52573111, 0. ], [-0.85065081, -0.52573111, 0. ], [ 0.52573111, 0. , 0.85065081], [ 0.52573111, 0. , -0.85065081], [-0.52573111, 0. , 0.85065081], [-0.52573111, 0. , -0.85065081], [ 0. , 0.85065081, 0.52573111], [ 0. , -0.85065081, 0.52573111], [ 0. , 0.85065081, -0.52573111], [ 0. , -0.85065081, -0.52573111]]) is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.icosahedron_faces: array([[ 8, 4, 0], [ 2, 5, 0], [ 2, 5, 11], [ 9, 2, 11], [ 2, 4, 0], [ 9, 2, 4], [10, 8, 1], [10, 8, 0], [10, 5, 0], [ 6, 3, 1], [ 9, 6, 3], [ 6, 8, 1], [ 6, 8, 4], [ 9, 6, 4], [ 7, 10, 1], [ 7, 10, 5], [ 7, 3, 1], [ 7, 3, 11], [ 9, 3, 11], [ 7, 5, 11]], dtype=uint16) is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.unit_octahedron: is not a callable object WARNING: Failed to get a function signature for dipy.core.sphere.unit_icosahedron: is not a callable object WARNING: Failed to get a function signature for dipy.core.sphere.hemi_icosahedron: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.PositiveDefiniteLeastSquares.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.data.rst:109::1: WARNING: Inline interpreted text or phrase reference start-string without end-string. WARNING: Failed to get a function signature for dipy.data.DATA_DIR: '/build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/files' is not a callable object WARNING: Failed to get a function signature for dipy.data.default_sphere: is not a callable object WARNING: Failed to get a function signature for dipy.data.small_sphere: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_data:15: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher._make_fetcher..fetcher:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.read_qtdMRI_test_retest_2subjects:1: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.read_mni_template:34: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.read_mni_template:39: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hcp:42: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hbn:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hbn:24: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.data.rst:28::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.data.rst:109::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/__init__.py:docstring of dipy.data.load_sdp_constraints:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hcp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/adaptive_soft_matching.py:docstring of dipy.denoise.adaptive_soft_matching.adaptive_soft_matching:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/adaptive_soft_matching.py:docstring of dipy.denoise.adaptive_soft_matching.adaptive_soft_matching:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/gibbs.py:docstring of dipy.denoise.gibbs.gibbs_removal:38: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/gibbs.py:docstring of dipy.denoise.gibbs.gibbs_removal:40: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.dimensionality_problem_message:5: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.dimensionality_problem_message:12: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.dimensionality_problem_message:14: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.genpca:56: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:63: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:67: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:40: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:44: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:7: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:9: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:56: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:57: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:61: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:62: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:38: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:39: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:42: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:43: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:32: WARNING: Duplicate explicit target name: "coupe11". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:18: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/adaptive_soft_matching.py:docstring of dipy.denoise.adaptive_soft_matching.adaptive_soft_matching:30: WARNING: duplicate citation Coupe11, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:27: WARNING: duplicate citation Coupe08, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:32: WARNING: duplicate citation Coupe11, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.denoise.rst /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.denoise.rst:50::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.denoise.rst:50::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.genpca:10: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:9: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:39: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:39: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:44: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:47: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:22: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:26: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:26: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/dpy.py:docstring of dipy.io.dpy.Dpy.__init__:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/dpy.py:docstring of dipy.io.dpy.Dpy.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/stateful_tractogram.py:docstring of dipy.io.stateful_tractogram.StatefulTractogram.from_sft:18: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.io.stateful_tractogram.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/streamline.py:docstring of dipy.io.streamline.load_generator:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/streamline.py:docstring of dipy.io.streamline.save_generator:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.nifti1_symmat:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.is_reference_info_valid:6: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.is_reference_info_valid:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.get_reference_info:8: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.nn.deepn4.logger: is not a callable object WARNING: Failed to get a function signature for dipy.nn.evac.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/histo_resdnn.py:docstring of dipy.nn.histo_resdnn.HistoResDNN.__init__:29: WARNING: Duplicate explicit target name: "1". WARNING: Failed to get a function signature for dipy.nn.histo_resdnn.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.Synb0.__init__:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.Synb0.__init__:22: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.Synb0.predict:29: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.nn.synb0.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.normalize:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.normalize:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.unnormalize:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.unnormalize:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:70::1: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:136::1: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: WARNING: Inline substitution_reference start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:5: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:14: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:19: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:27: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.kfold_xval:39: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:19: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:24: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:44: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:48: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:51: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:53: WARNING: Duplicate explicit target name: "4". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:20: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:22: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:30: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:35: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response:12: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:13: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:45: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:46: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.estimate_response:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:34: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:35: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:40: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:41: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response_ssst:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response_ssst:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.recursive_response:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.recursive_response:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.recursive_response:53: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.__init__:9: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.__init__:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.predict:10: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.predict:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorFit.__init__:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorFit.predict:11: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.multi_gaussian_k_from_c:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.split_cti_params:15: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.cti_prediction:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.cti_prediction:9: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.cti_prediction:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.ls_fit_cti:26: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:14: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:16: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:16: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:17: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:25: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:28: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.predict:9: WARNING: Literal block expected; none found. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.predict:10: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.__init__:16: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.__init__:17: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:48: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:51: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:54: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:39: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:43: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:67: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:70: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:73: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.carlson_rf:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion_variance:34: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:41: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:45: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:71: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:74: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:77: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:55: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:58: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:61: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_maximum:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_maximum:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:21: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:45: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:49: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:4: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:19: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:26: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.ls_fit_dki:28: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.cls_fit_dki:35: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.cls_fit_dki:42: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.split_dki_param:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:14: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:17: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:17: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.predict:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.predict:29: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.__init__:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.__init__:27: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.awf:11: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.axonal_diffusivity:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_ad:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_evals:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_rd:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.restricted_evals:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.tortuosity:12: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.axonal_water_fraction:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.axonal_water_fraction:32: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:9: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:40: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.dkimicro_prediction:1: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:19: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:20: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:22: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:25: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:26: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.create_qspace:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.create_qtable:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.hanning_filter:12: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.LR_deconv:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:21: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:21: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:48: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:51: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:54: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:5: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:9: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:15: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:21: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.linearity:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.planarity:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.sphericity:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.isotropic:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.linearity:25: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.planarity:26: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.sphericity:25: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.wls_fit_tensor:55: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.ols_fit_tensor:42: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:39: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:40: WARNING: Explicit markup ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.reconst.dti._lt_indices: array([[0, 1, 3], [1, 2, 4], [3, 4, 5]]) is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.reconst.dti._lt_rows: array([0, 1, 1, 2, 2, 2]) is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.reconst.dti._lt_cols: array([0, 0, 1, 0, 1, 2]) is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:87: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.quantize_evecs:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:13: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:17: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:21: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:15: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:15: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:16: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:22: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorFit.__init__:12: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorFit.__init__:19: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.lower_triangular_to_cholesky:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.cholesky_to_lower_triangular:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:21: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:23: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelTRR.__init__:16: WARNING: Literal block expected; none found. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelTRR.__init__:78: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelTRR.__init__:81: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:17: WARNING: Literal block expected; none found. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:31: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:34: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:37: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:30: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:34: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:20: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:24: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:28: WARNING: Duplicate explicit target name: "4". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:94: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:98: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:103: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:107: WARNING: Duplicate explicit target name: "4". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:111: WARNING: Duplicate explicit target name: "5". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:115: WARNING: Duplicate explicit target name: "6". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:11: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:12: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:13: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:12: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:13: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:12: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:13: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.norm_of_laplacian_signal:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.norm_of_laplacian_signal:11: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf:13: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf:14: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:9: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:10: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:13: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:14: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:13: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:14: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:7: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:8: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:11: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:7: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:8: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:11: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:7: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:8: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:11: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.isotropic_scale_factor:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.isotropic_scale_factor:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_index_matrix:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_index_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat_isotropic:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat_isotropic:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_1d:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_1d:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_matrix:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_matrix:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_1d:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_1d:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_matrix:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_matrix:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_odf_matrix:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_odf_matrix:18: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_phi_matrix:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_phi_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_signal_basis:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_signal_basis:17: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_psi_matrix:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_psi_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_pdf_basis:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_pdf_basis:17: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:27: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:28: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:27: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:28: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix:19: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix_from_index_matrix:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix_from_index_matrix:19: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_index_matrix:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_index_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_u:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_u:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_t:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_t:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_s:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_s:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_STU_reg_matrices:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_STU_reg_matrices:17: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_laplacian_reg_matrix:22: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_laplacian_reg_matrix:23: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.generalized_crossvalidation:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:19: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:30: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:44: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:47: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:51: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.multi_tissue_basis:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.multi_tissue_basis:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.multi_shell_fiber_response:21: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.mask_for_response_msmt:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.mask_for_response_msmt:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.response_from_mask_msmt:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.response_from_mask_msmt:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.auto_response_msmt:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.auto_response_msmt:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.msd:11: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.msk:11: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:20: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:20: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:21: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.msk_from_awf:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:28: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.wls_fit_msdki:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:19: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.norm_of_laplacian_signal:14: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf:20: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:23: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:22: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qtdmri_to_mapmri_coef:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:20: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:20: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:20: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_to_mapmri_matrix:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_isotropic_to_mapmri_matrix:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_laplacian_reg_matrix:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_isotropic_laplacian_reg_matrix:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part23_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part23_iso_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part4_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part4_iso_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part1_reg_matrix_tau:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part23_reg_matrix_tau:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part4_reg_matrix_tau:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.generalized_crossvalidation:5: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.GCV_cost_function:5: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_number_of_coefficients:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:15: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:21: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:24: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:17: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:18: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:20: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:22: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_md:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_md:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_md:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:16: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:18: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:19: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:16: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:17: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.md:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.md:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.md:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.mean_d_sq:5: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.mean_d_sq:9: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.mean_d_sq:18: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:4: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:10: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:15: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:22: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:24: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:28: CRITICAL: Unexpected section title. References ---------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:29: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:4: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:16: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:21: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:27: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:29: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:4: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:9: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:14: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:22: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:25: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:26: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:23: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:27: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:68: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:77: WARNING: Duplicate explicit target name: "2". WARNING: Failed to get a function signature for dipy.reconst.rumba.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.generate_kernel:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.generate_kernel:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.__init__:48: WARNING: Duplicate explicit target name: "rokem2014". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.fit:25: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.fit:27: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.fit:36: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:56: WARNING: Duplicate explicit target name: "rokem2015". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:61: WARNING: Duplicate explicit target name: "rokem2014". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.CsaOdfModel:5: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.OpdtModel:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.OpdtModel:9: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.QballModel:5: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_rh:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.bootstrap_data_array:12: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.bootstrap_data_array:14: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.bootstrap_data_array:17: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:35: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:38: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:42: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:36: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:40: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:39: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:42: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:46: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.anisotropic_power:1: WARNING: Inline substitution_reference start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:27: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:31: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:27: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:31: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_pdf:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_pdf:7: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_signal:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_signal:7: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_pdf:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_pdf:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_odf:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_odf:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/utils.py:docstring of dipy.reconst.utils.dki_design_matrix:13: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:40: WARNING: Footnote [7] is not referenced. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:43: WARNING: Footnote [8] is not referenced. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:47: WARNING: Footnote [9] is not referenced. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.gen_dirac:20: ERROR: Undefined substitution referenced: "m". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux_from_index:1: ERROR: Undefined substitution referenced: "m". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux:1: ERROR: Undefined substitution referenced: "m". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.__init__:48: WARNING: duplicate citation Rokem2014, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:56: WARNING: duplicate citation Rokem2015, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:61: WARNING: duplicate citation Rokem2014, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:136::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:136::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:136::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:240::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:364::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:364::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:364::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:481::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:544::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:564::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:564::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:564::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:564::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:3: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:3: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:9: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:19: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:30: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:30: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:33: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:3: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:27: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.forward_sdt_deconv_mat:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.csdeconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:24: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:30: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.kfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.kfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.kfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:22: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:6: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:38: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion_variance:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion_variance:13: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:20: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.apparent_kurtosis_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.apparent_kurtosis_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.apparent_kurtosis_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:13: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:32: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:32: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:43: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:13: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:34: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:34: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:37: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:13: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_fractional_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_fractional_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_fractional_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.ls_fit_dki:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.cls_fit_dki:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.predict:23: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.__init__:21: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.awf:6: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.axonal_diffusivity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_ad:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_evals:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_rd:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.restricted_evals:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.tortuosity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.tortuosity:7: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.axonal_water_fraction:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:34: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.dkimicro_prediction:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.msd_discrete:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.LR_deconv:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.linearity:4: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.planarity:4: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.sphericity:4: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.isotropic:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.isotropic:16: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.deviatoric:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.deviatoric:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.mode:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.mode:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.linearity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.planarity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.sphericity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.wls_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.ols_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:15: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:7: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:9: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.fwdti_prediction:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.wls_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.lower_triangular_to_cholesky:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.cholesky_to_lower_triangular:6: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:3: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:3: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:3: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:3: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:3: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:4: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:8: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:8: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "5". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:21: ERROR: Duplicate target name, cannot be used as a unique reference: "5". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:21: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:50: ERROR: Duplicate target name, cannot be used as a unique reference: "6". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.norm_of_laplacian_signal:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_index_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat_isotropic:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_1d:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_1d:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_phi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_signal_basis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_psi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_pdf_basis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix_from_index_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_index_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_u:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_t:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_s:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_STU_reg_matrices:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_laplacian_reg_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.generalized_crossvalidation_array:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.generalized_crossvalidation:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:11: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:11: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:13: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.msk_from_awf:16: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:19: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.wls_fit_msdki:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/odf.py:docstring of dipy.reconst.odf.gfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriModel:1: ERROR: Unknown target name: "n". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.norm_of_laplacian_signal:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qtdmri_to_mapmri_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:1966: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_signal_matrix". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:1981: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_isotropic_signal_matrix". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:1991: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_eap_matrix". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.reconst.rst:1996: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_isotropic_eap_matrix". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:14: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:14: ERROR: Unknown target name: "c". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:14: ERROR: Unknown target name: "c". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:16: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:13: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.mbessel_ratio:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv_global:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv_global:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv_global:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier_from_index:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier_from_index:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux_from_index:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_mrtrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_mrtrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_mrtrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_basis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:15: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:15: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:14: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:11: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:11: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreModel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreModel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "5". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_signal:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.evaluate_results:9: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:23: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:25: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:55: WARNING: Inline literal start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:56: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:57: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:79: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:25: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:27: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:57: WARNING: Inline literal start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:58: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:59: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:81: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:86: WARNING: Explicit markup ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.segment.bundles.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.ba_analysis:24: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.cluster_bundle:23: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:10: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:12: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:26: WARNING: Duplicate explicit target name: "chandio2020". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:27: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:32: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.Cluster.assign:5: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.ClusterMap.add_cluster:5: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.ClusterMap.remove_cluster:5: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.QuickBundlesX:17: WARNING: Duplicate explicit target name: "garyfallidis12". WARNING: Failed to get a function signature for dipy.segment.clustering.logger: is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:13: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:31: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:35: WARNING: Duplicate explicit target name: "garyfallidis16". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/fss.py:docstring of dipy.segment.fss.FastStreamlineSearch.radius_search:30: WARNING: Duplicate explicit target name: "stonge2022". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/mask.py:docstring of dipy.segment.mask.median_otsu:57: WARNING: Inline literal start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/metric.py:docstring of dipy.segment.metric.mdf:20: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:18: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.__init__:38: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:79: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:81: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_adjacency:22: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/tracking_flow.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.ba_analysis:24: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.cluster_bundle:23: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:26: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:32: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.QuickBundlesX:17: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:31: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:35: WARNING: duplicate citation Garyfallidis16, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/fss.py:docstring of dipy.segment.fss.FastStreamlineSearch.radius_search:30: WARNING: duplicate citation StOnge2022, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/metric.py:docstring of dipy.segment.metric.mdf:20: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst WARNING: Failed to get a function signature for dipy.sims.voxel.diffusion_evals: array([0.0015, 0.0004, 0.0004]) is not a callable object /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:87: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:35: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.sticks_and_ball:30: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.callaghan_perpendicular:19: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:37: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:40: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor:31: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor:34: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_dki:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_dki:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_dki:55: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.kurtosis_element:37: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.dki_signal:29: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_odf:22: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_rtop:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_rtop:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_pdf:25: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_pdf:25: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_msd:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_msd:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.sims.rst:54::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.sims.rst:54::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/phantom.py:docstring of dipy.sims.phantom.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/phantom.py:docstring of dipy.sims.phantom.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.callaghan_perpendicular:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.kurtosis_element:33: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/stats/analysis.py:docstring of dipy.stats.analysis.assignment_map:22: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/stats/analysis.py:docstring of dipy.stats.analysis.assignment_map:21: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/tracking/utils.py:docstring of dipy.tracking.utils.transform_tracking_output:13: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/app.py:docstring of dipy.viz.horizon.app.horizon:71: WARNING: Duplicate explicit target name: "horizon_ismrm19". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/tab/base.py:docstring of dipy.viz.horizon.tab.base.HorizonTab.register_elements:5: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/util.py:docstring of dipy.viz.horizon.util.is_binary_image:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/util.py:docstring of dipy.viz.horizon.util.check_peak_size:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/util.py:docstring of dipy.viz.horizon.util.check_peak_size:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/visualizer/peak.py:docstring of dipy.viz.horizon.visualizer.peak.PeakActor:17: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/panel.py:docstring of dipy.viz.panel.slicer_panel:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/panel.py:docstring of dipy.viz.panel.slicer_panel:14: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.overlay_images:30: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.plot_2d_diffeomorphic_map:48: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.plot_slices:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.overlay_slices:32: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/app.py:docstring of dipy.viz.horizon.app.horizon:71: WARNING: duplicate citation Horizon_ISMRM19, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.viz.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/docstring_parser.py:docstring of dipy.workflows.docstring_parser:17: WARNING: Inline literal start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:30: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:32: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:33: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:54: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:58: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:61: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.ImageRegistrationFlow.run:29: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.ApplyTransformFlow.run:11: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.NLMeansFlow.run:29: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:53: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:58: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:63: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:30: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:31: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:35: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:36: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:26: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:27: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:30: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:31: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/docstring_parser.py:docstring of dipy.workflows.docstring_parser.Reader.__init__:2: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/docstring_parser.py:docstring of dipy.workflows.docstring_parser.Reader.__init__:5: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/io.py:docstring of dipy.workflows.io.SplitFlow.run:7: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/io.py:docstring of dipy.workflows.io.SplitFlow.run:9: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/io.py:docstring of dipy.workflows.io.SplitFlow.run:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/nn.py:docstring of dipy.workflows.nn.EVACPlusFlow.run:20: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:77: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:81: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:85: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstCSDFlow.run:66: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstCSAFlow.run:53: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:66: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:70: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:75: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstRUMBAFlow.run:106: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:54: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:59: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.LabelsBundlesFlow.run:16: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleAnalysisTractometryFlow.run:25: WARNING: Duplicate explicit target name: "chandio2020". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleAnalysisTractometryFlow.run:26: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.LinearMixedModelsFlow.save_lmm_plot:11: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.LinearMixedModelsFlow.save_lmm_plot:13: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.LinearMixedModelsFlow.save_lmm_plot:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleShapeAnalysis.run:24: WARNING: Duplicate explicit target name: "chandio2020". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleShapeAnalysis.run:25: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.buan_bundle_profiles:29: WARNING: Duplicate explicit target name: "chandio2020". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.buan_bundle_profiles:30: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/viz.py:docstring of dipy.workflows.viz.HorizonFlow.run:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/viz.py:docstring of dipy.workflows.viz.HorizonFlow.run:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:88: WARNING: Footnote [4] is not referenced. /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:17: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:53: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:57: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:60: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.BundleWarpFlow.run:47: WARNING: duplicate citation Chandio2023, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.NLMeansFlow.run:28: WARNING: duplicate citation Descoteaux08, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.denoise.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstIvimFlow.run:44: WARNING: duplicate citation Stejskal65, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/reconstruction_flow.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstIvimFlow.run:50: WARNING: duplicate citation LeBihan84, other instance in /build/reproducible-path/dipy-1.9.0/doc/interfaces/reconstruction_flow.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:54: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:58: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.stats.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.LabelsBundlesFlow.run:16: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleAnalysisTractometryFlow.run:25: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleShapeAnalysis.run:24: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.buan_bundle_profiles:29: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/viz.py:docstring of dipy.workflows.viz.HorizonFlow.run:71: WARNING: duplicate citation Horizon_ISMRM19, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.viz.rst /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:15: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:41: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:19: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst:640: ERROR: Duplicate target name, cannot be used as a unique reference: "io_iterator". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:27: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstRUMBAFlow.run:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_align_affine.rst:30: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_align_affine.rst:32: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_align_affine.rst:34: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_align_affine.rst:35: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_align_syn.rst:32: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_align_syn.rst:34: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_apply_transform.rst:17: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_buan_profiles.rst:38: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_buan_profiles.rst:37: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_buan_shapes.rst:25: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_buan_shapes.rst:27: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_buan_shapes.rst:40: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_buan_shapes.rst:39: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_buan_profiles.rst /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_bundlewarp.rst:57: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_bundlewarp.rst:56: WARNING: duplicate citation Chandio2023, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_lpca.rst:48: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_lpca.rst:45: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_mppca.rst:24: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_mppca.rst:26: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_mppca.rst:43: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_mppca.rst:41: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_nlmeans.rst:43: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_nlmeans.rst:42: WARNING: duplicate citation Descoteaux08, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_patch2self.rst:32: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_patch2self.rst:34: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_patch2self.rst:50: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_denoise_patch2self.rst:49: WARNING: duplicate citation Fadnavis20, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_evac_plus.rst:38: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_evac_plus.rst:37: WARNING: duplicate citation Park2022, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_csa.rst:58: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_csa.rst:57: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_csd.rst:35: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_csd.rst:37: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_csd.rst:39: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_csd.rst:43: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_csd.rst:44: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_csd.rst:66: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_csd.rst:65: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dki.rst:34: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dki.rst:64: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dki.rst:61: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dki.rst:62: WARNING: Footnote [2] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dti.rst:35: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dti.rst:37: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dti.rst:64: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dti.rst:59: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dti.rst:60: WARNING: Footnote [2] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dti.rst:61: WARNING: Footnote [3] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_dti.rst:62: WARNING: Footnote [4] is not referenced. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_ivim.rst:32: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_ivim.rst:53: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_fit_ivim.rst:51: WARNING: duplicate citation Stejskal65, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst 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without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_horizon.rst:37: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_horizon.rst:45: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_horizon.rst:47: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_horizon.rst:51: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_horizon.rst:53: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_horizon.rst:54: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_horizon.rst:70: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_horizon.rst:69: WARNING: duplicate citation Horizon_ISMRM19, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_labelsbundles.rst:36: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_labelsbundles.rst:35: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.9.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_median_otsu.rst:31: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.9.0/doc/reference_cmd/dipy_recobundles.rst:70: WARNING: Explicit markup ends without a blank line; unexpected unindent. 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start-string without end-string. /build/reproducible-path/dipy-1.9.0/doc/release_notes/release1.4.1.rst:82: WARNING: Inline emphasis start-string without end-string. looking for now-outdated files... none found pickling environment... done checking consistency... /build/reproducible-path/dipy-1.9.0/doc/devel/gitwash/dot2_dot3.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.9.0/doc/developers.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.9.0/doc/gimbal_lock.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.9.0/doc/recipes.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.9.0/doc/subscribe.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.9.0/doc/theory/b_and_q.rst: WARNING: document isn't 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[100%] user_guide/mission /build/reproducible-path/dipy-1.9.0/doc/index.rst:31: WARNING: 'any' reference target not found: examples_built/index /build/reproducible-path/dipy-1.9.0/doc/interfaces/bundlewarp_registration_flow.rst:32: WARNING: citation not found: Chandio23 /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:104: WARNING: Could not obtain image size. :scale: option is ignored. /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:107: WARNING: Could not obtain image size. :scale: option is ignored. /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:150: WARNING: Could not obtain image size. :scale: option is ignored. /build/reproducible-path/dipy-1.9.0/doc/interfaces/denoise_flow.rst:153: WARNING: Could not obtain image size. :scale: option is ignored. /build/reproducible-path/dipy-1.9.0/doc/old_highlights.rst:296: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.9.0/doc/old_highlights.rst:299: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.9.0/doc/old_news.rst:37: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.9.0/doc/recipes.rst:15: WARNING: undefined label: 'sphx_glr_examples_built_file_formats_streamline_formats.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:11: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dti.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:17: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_restore_dti.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:23: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_fwdti.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:29: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dki.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:35: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dki.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:41: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dki_micro.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:47: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_msdki.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:53: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_csa.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:65: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_ivim.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:71: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_ivim.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:83: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dsi.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:89: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dsid.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:95: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_gqi.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:101: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_sfm.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:107: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_csa.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:113: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_shore.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:119: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_mapmri.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:125: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_mapmri.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:137: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_csd.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:143: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_mcsd.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:149: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_forecast.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:155: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_rumba.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:161: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_qti.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:167: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_qtiplus.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:179: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_qtdmri.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:191: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_msdki.py' /build/reproducible-path/dipy-1.9.0/doc/reconstruction_models_list.rst:197: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_cti.py' /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.nls_iter:1: WARNING: citation not found: Chang2005 /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.nls_fit_tensor:1: WARNING: citation not found: Chang2005 /build/reproducible-path/dipy-1.9.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.9.0/doc/stateoftheart.rst:7: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.9.0/doc/stateoftheart.rst:24: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.9.0/doc/user_guide/getting_started.rst:41: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.9.0/doc/user_guide/introduction.rst:11: WARNING: undefined label: 'examples' generating indices... genindex py-modindex done writing additional pages... search done copying images... [ 17%] devel/gitwash/branch_dropdown.png copying images... [ 33%] devel/gitwash/collaborators.png copying images... [ 50%] devel/gitwash/forking_button.png copying images... [ 67%] theory/spherical_coordinates.png copying images... [ 83%] _static/colorfa.png copying images... [100%] _static/pretty_tracks.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 1383 warnings. The HTML pages are in _build/html. Build finished. The HTML pages are in _build/html. make[2]: Leaving directory '/build/reproducible-path/dipy-1.9.0/doc' # objects inventory is of no use for the package rm doc/_build/html/objects.inv # references to cloudflare and github are privacy breaches sed 's@https://cdnjs\.cloudflare\.com/ajax/libs/mathjax/[^/]\+/@file:///usr/share/javascript/mathjax/unpacked/@' \ -i doc/_build/html/*.html \ doc/_build/html/interfaces/*.html \ doc/_build/html/theory/*.html sed 's@https://cdn\.jsdelivr\.net/npm/mathjax[@]3/es5/tex-mml-chtml\.js@file:///usr/share/nodejs/mathjax-full/es5/tex-mml-chtml.js@' \ -i doc/_build/html/*.html \ doc/_build/html/interfaces/*.html \ doc/_build/html/reference/*.html \ doc/_build/html/theory/*.html # FIXME: references to github are for images part of dipy_data, which # is not available in debian; these may need packaging to solve the # privacy breach here. # Run tests later on # cd build to prevent use of local/not-built source tree set -ex \ ; for PYTHON in 3.12 3.11 \ ; do PYPKG="/build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python$PYTHON/dist-packages" \ ; export PYTHONPATH="$PYPKG" \ ; echo "I: Running Dipy unittests using $PYTHON" \ ; cd "$PYPKG" \ ; PATH=/build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/bin:$PATH \ xvfb-run -a -s "-screen 0 1280x1024x24 -noreset" \ python$PYTHON -m pytest -v -k 'not dipy/utils/tests/test_tractogram.py and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_spike and not test_normalization and not test_kernel_input and not test_fbc and not test_concatenate and not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py' dipy \ ; rm .pytest_cache -rf \ ; done + PYPKG=/build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages + export PYTHONPATH=/build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages + echo I: Running Dipy unittests using 3.12 I: Running Dipy unittests using 3.12 + cd /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages + PATH=/build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games xvfb-run -a -s -screen 0 1280x1024x24 -noreset python3.12 -m pytest -v -k not dipy/utils/tests/test_tractogram.py and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_spike and not test_normalization and not test_kernel_input and not test_fbc and not test_concatenate and not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py dipy ============================= test session starts ============================== platform linux -- Python 3.12.4, pytest-8.2.2, pluggy-1.5.0 -- /usr/bin/python3.12 cachedir: .pytest_cache rootdir: /build/reproducible-path/dipy-1.9.0 configfile: pyproject.toml collecting ... collected 1000 items / 9 deselected / 991 selected dipy/align/tests/test_api.py::test_syn_registration SKIPPED (test ne...) 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[ 99%] dipy/workflows/tests/test_workflow.py::test_force_overwrite PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_get_sub_runs PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_run PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_missing_file PASSED [100%] =============================== warnings summary =============================== dipy/reconst/qti.py:19 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:19: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 3 x 3 matrices into 6 x 1 vectors. dipy/reconst/qti.py:57 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:57: SyntaxWarning: invalid escape sequence '\m' """Convert 6 x 1 vectors into symmetric 3 x 3 matrices. dipy/reconst/qti.py:91 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:91: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 6 x 6 matrices into 21 x 1 vectors. dipy/reconst/qti.py:137 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:137: SyntaxWarning: invalid escape sequence '\m' """Convert 21 x 1 vectors into symmetric 6 x 6 matrices. dipy/reconst/qti.py:187 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:187: SyntaxWarning: invalid escape sequence '\m' """Convert a 1 x 6 vector into a symmetric 3 x 3 matrix. dipy/reconst/qti.py:222 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:222: SyntaxWarning: invalid escape sequence '\m' """Convert 1 x 21 vector into a symmetric 6 x 6 matrix. dipy/reconst/qti.py:280 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:280: SyntaxWarning: invalid escape sequence '\m' """Calculate covariance of a diffusion tensor distribution (DTD). dipy/reconst/qti.py:323 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:323: SyntaxWarning: invalid escape sequence '\e' """Generate signals using the covariance tensor signal representation. dipy/reconst/qti.py:395 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:395: SyntaxWarning: invalid escape sequence '\m' """Calculate the design matrix from the b-tensors. dipy/reconst/qti.py:761 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:761: SyntaxWarning: invalid escape sequence '\l' """Mean diffusivity. dipy/reconst/qti.py:783 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:783: SyntaxWarning: invalid escape sequence '\m' """Variance of microscopic mean diffusivities. dipy/reconst/qti.py:805 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:805: SyntaxWarning: invalid escape sequence '\m' """Shear variance. dipy/reconst/qti.py:827 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:827: SyntaxWarning: invalid escape sequence '\m' """Total isotropic variance. dipy/reconst/qti.py:863 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:863: SyntaxWarning: invalid escape sequence '\l' """Average of microscopic diffusion tensors' outer products with dipy/reconst/qti.py:886 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:886: SyntaxWarning: invalid escape sequence '\m' """Normalized variance of mean diffusivities. dipy/reconst/qti.py:909 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:909: SyntaxWarning: invalid escape sequence '\m' """Normalized microscopic anisotropy. dipy/reconst/qti.py:934 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:934: SyntaxWarning: invalid escape sequence '\m' """Microscopic fractional anisotropy. dipy/reconst/qti.py:953 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:953: SyntaxWarning: invalid escape sequence '\l' """Normalized macroscopic anisotropy. dipy/reconst/qti.py:979 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:979: SyntaxWarning: invalid escape sequence '\s' """Fractional anisotropy. dipy/reconst/qti.py:998 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:998: SyntaxWarning: invalid escape sequence '\m' """Microscopic orientation coherence. dipy/reconst/qti.py:1036 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:1036: SyntaxWarning: invalid escape sequence '\m' """Bulk kurtosis. dipy/reconst/qti.py:1061 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:1061: SyntaxWarning: invalid escape sequence '\m' """Shear kurtosis. dipy/reconst/qti.py:1086 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:1086: SyntaxWarning: invalid escape sequence '\m' """Microscopic kurtosis. debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/tests/test_reslice.py: 16 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/tests/test_gibbs.py: 27 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/tests/test_peaks.py: 70 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_sfm.py: 16 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/tests/test_parallel.py: 24 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_denoise.py: 1 warning debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_reconst_csa_csd.py: 12 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_reconst_rumba.py: 12 warnings /usr/lib/python3.12/multiprocessing/popen_fork.py:66: DeprecationWarning: This process (pid=1596181) is multi-threaded, use of fork() may lead to deadlocks in the child. self.pid = os.fork() debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_sfm.py::test_sfm /usr/lib/python3/dist-packages/joblib/externals/loky/backend/fork_exec.py:38: DeprecationWarning: This process (pid=1596181) is multi-threaded, use of fork() may lead to deadlocks in the child. pid = os.fork() debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_tracking.py::test_particle_filtering_tracking_workflows /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_tracking.py:73: RuntimeWarning: invalid value encountered in cast save_nifti(path, arr.astype(np.uint8), affine) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html == 824 passed, 167 skipped, 9 deselected, 203 warnings in 1087.60s (0:18:07) === + rm .pytest_cache -rf + PYPKG=/build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages + export PYTHONPATH=/build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages + echo I: Running Dipy unittests using 3.11 I: Running Dipy unittests using 3.11 + cd /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages + PATH=/build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games xvfb-run -a -s -screen 0 1280x1024x24 -noreset python3.11 -m pytest -v -k not dipy/utils/tests/test_tractogram.py and not test_io_info and not test_concatenate_flow and not test_convert_tractogram_flow and not test_spike and not test_normalization and not test_kernel_input and not test_fbc and not test_concatenate and not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py dipy ============================= test session starts ============================== platform linux -- Python 3.11.9, pytest-8.2.2, pluggy-1.5.0 -- /usr/bin/python3.11 cachedir: .pytest_cache rootdir: /build/reproducible-path/dipy-1.9.0 configfile: pyproject.toml collecting ... collected 1000 items / 9 deselected / 991 selected 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[ 99%] dipy/workflows/tests/test_workflow.py::test_force_overwrite PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_get_sub_runs PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_run PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_missing_file PASSED [100%] =============================== warnings summary =============================== dipy/reconst/qti.py:19 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:19: DeprecationWarning: invalid escape sequence '\m' """Convert symmetric 3 x 3 matrices into 6 x 1 vectors. dipy/reconst/qti.py:57 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:57: DeprecationWarning: invalid escape sequence '\m' """Convert 6 x 1 vectors into symmetric 3 x 3 matrices. dipy/reconst/qti.py:91 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:91: DeprecationWarning: invalid escape sequence '\m' """Convert symmetric 6 x 6 matrices into 21 x 1 vectors. dipy/reconst/qti.py:137 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:137: DeprecationWarning: invalid escape sequence '\m' """Convert 21 x 1 vectors into symmetric 6 x 6 matrices. dipy/reconst/qti.py:187 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:187: DeprecationWarning: invalid escape sequence '\m' """Convert a 1 x 6 vector into a symmetric 3 x 3 matrix. dipy/reconst/qti.py:222 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:222: DeprecationWarning: invalid escape sequence '\m' """Convert 1 x 21 vector into a symmetric 6 x 6 matrix. dipy/reconst/qti.py:280 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:280: DeprecationWarning: invalid escape sequence '\m' """Calculate covariance of a diffusion tensor distribution (DTD). dipy/reconst/qti.py:323 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:323: DeprecationWarning: invalid escape sequence '\e' """Generate signals using the covariance tensor signal representation. dipy/reconst/qti.py:395 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:395: DeprecationWarning: invalid escape sequence '\m' """Calculate the design matrix from the b-tensors. dipy/reconst/qti.py:761 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:761: DeprecationWarning: invalid escape sequence '\l' """Mean diffusivity. dipy/reconst/qti.py:783 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:783: DeprecationWarning: invalid escape sequence '\m' """Variance of microscopic mean diffusivities. dipy/reconst/qti.py:805 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:805: DeprecationWarning: invalid escape sequence '\m' """Shear variance. dipy/reconst/qti.py:827 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:827: DeprecationWarning: invalid escape sequence '\m' """Total isotropic variance. dipy/reconst/qti.py:863 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:863: DeprecationWarning: invalid escape sequence '\l' """Average of microscopic diffusion tensors' outer products with dipy/reconst/qti.py:886 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:886: DeprecationWarning: invalid escape sequence '\m' """Normalized variance of mean diffusivities. dipy/reconst/qti.py:909 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:909: DeprecationWarning: invalid escape sequence '\m' """Normalized microscopic anisotropy. dipy/reconst/qti.py:934 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:934: DeprecationWarning: invalid escape sequence '\m' """Microscopic fractional anisotropy. dipy/reconst/qti.py:953 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:953: DeprecationWarning: invalid escape sequence '\l' """Normalized macroscopic anisotropy. dipy/reconst/qti.py:979 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:979: DeprecationWarning: invalid escape sequence '\s' """Fractional anisotropy. dipy/reconst/qti.py:998 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:998: DeprecationWarning: invalid escape sequence '\m' """Microscopic orientation coherence. dipy/reconst/qti.py:1036 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:1036: DeprecationWarning: invalid escape sequence '\m' """Bulk kurtosis. dipy/reconst/qti.py:1061 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:1061: DeprecationWarning: invalid escape sequence '\m' """Shear kurtosis. dipy/reconst/qti.py:1086 /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:1086: DeprecationWarning: invalid escape sequence '\m' """Microscopic kurtosis. debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/workflows/tests/test_tracking.py::test_particle_filtering_tracking_workflows /build/reproducible-path/dipy-1.9.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/workflows/tests/test_tracking.py:73: RuntimeWarning: invalid value encountered in cast save_nifti(path, arr.astype(np.uint8), affine) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html === 824 passed, 167 skipped, 9 deselected, 24 warnings in 1092.64s (0:18:12) === + rm .pytest_cache -rf # Cleanup files landing unnecessarily in the python3 modules directory. rm -fv debian/python3-dipy/usr/lib/python3*/dist-packages/*.nii.gz removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dirs.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/gfa.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/inc_static.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/indices.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/shm.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/values.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dirs.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/gfa.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/inc_static.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/indices.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/shm.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/values.nii.gz' rm -fv debian/python3-dipy/usr/lib/python3*/dist-packages/*.trk removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/moved.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/moved_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/moving_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/recognized_orig.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/static_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/tractogram.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/moved.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/moved_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/moving_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/recognized_orig.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/static_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/tractogram.trk' rm -fv debian/python3-dipy/usr/lib/python3*/dist-packages/affine.txt removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/affine.txt' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/affine.txt' # Cleanup files landing in non-standard path rm -rfv debian/python3-dipy/usr/doc removed 'debian/python3-dipy/usr/doc/dipy/examples/affine_registration_3d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/affine_registration_masks.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/afq_tract_profiles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/brain_extraction_dwi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_assignment_maps.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_extraction.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_group_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_shape_similarity.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundlewarp_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/cluster_confidence.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/combined_workflow_creation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/contextual_enhancement.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_ascm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_gibbs.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_localpca.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_mppca.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_nlmeans.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_patch2self.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/fast_streamline_search.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/fiber_to_bundle_coherence.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/gradients_spheres.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/histology_resdnn.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/kfold_xval.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/linear_fascicle_evaluation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/motion_correction.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/path_length_map.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/piesno.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/quick_start.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csa.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csa_parallel.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csd.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csd_parallel.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_cti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dki_micro.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsi_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsid.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_forecast.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_fwdti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_gqi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_ivim.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_mapmri.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_mcsd.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_msdki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qtdmri.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qtiplus.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_rumba.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_sfm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_sh.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_shore.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_shore_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/register_binary_fuzzy.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reslice_datasets.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/restore_dti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_clustering_features.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_clustering_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_extending_clustering_framework.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_quickbundles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/simulate_dki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/simulate_multi_tensor.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/snr_in_cc.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_formats.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_length.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_tools.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/surface_seed.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/syn_registration_2d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/syn_registration_3d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tissue_classification.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_bootstrap_peaks.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_deterministic.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_introduction_eudx.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_pft.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_probabilistic.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_ptt.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_rumba.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_sfm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_stopping_criterion.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_advanced.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_bundles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_roi_contour.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_slice.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/workflow_creation.py' removed directory 'debian/python3-dipy/usr/doc/dipy/examples' removed directory 'debian/python3-dipy/usr/doc/dipy' removed directory 'debian/python3-dipy/usr/doc' make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-dipy-doc. If the default is wrong, please use --doc-main-package dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' set -e \ ; test -d debian/python3-dipy/usr/lib || exit 0 \ ; for lib in $(find debian/python3-dipy/usr/lib -name "*.so") \ ; do sdir=$(dirname $lib) \ ; tdir=debian/python3-dipy-lib/${sdir#*python3-dipy/} \ ; mkdir -p "${tdir}" \ ; mv -v "${lib}" "${tdir}" \ ; done renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/bundlemin.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/bundlemin.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/crosscorr.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/crosscorr.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/expectmax.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/expectmax.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/parzenhist.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/parzenhist.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/sumsqdiff.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/sumsqdiff.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/transforms.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/transforms.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/vector_fields.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/core/interpolation.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/core/interpolation.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/denspeed.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/denspeed.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/enhancement_kernel.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/enhancement_kernel.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/nlmeans_block.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/nlmeans_block.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/pca_noise_estimate.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/shift_twist_convolution.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/shift_twist_convolution.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/pmf.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/pmf.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/ptt_direction_getter.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/ptt_direction_getter.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/eudx_direction_getter.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/eudx_direction_getter.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/quick_squash.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/quick_squash.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/recspeed.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/recspeed.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/vec_val_sum.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/vec_val_sum.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/clustering_algorithms.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/clustering_algorithms.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/clusteringspeed.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/cythonutils.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/cythonutils.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/featurespeed.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/metricspeed.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/mrf.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/mrf.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/direction_getter.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/direction_getter.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/distances.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/distances.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/fbcmeasures.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/localtrack.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/propspeed.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/stopping_criterion.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/streamlinespeed.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/vox2track.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/utils/fast_numpy.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/utils/fast_numpy.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/utils/omp.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/utils/omp.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/utils/tests/test_fast_numpy.cpython-311-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/bundlemin.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/crosscorr.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/crosscorr.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/expectmax.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/expectmax.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/parzenhist.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/parzenhist.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/sumsqdiff.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/sumsqdiff.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/transforms.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/transforms.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/vector_fields.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/core/interpolation.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/core/interpolation.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/denspeed.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/denspeed.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/enhancement_kernel.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/enhancement_kernel.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/nlmeans_block.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/nlmeans_block.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/pca_noise_estimate.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/pca_noise_estimate.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/shift_twist_convolution.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/pmf.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/pmf.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/ptt_direction_getter.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/ptt_direction_getter.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/eudx_direction_getter.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/eudx_direction_getter.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/quick_squash.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/quick_squash.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/recspeed.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/recspeed.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/vec_val_sum.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/vec_val_sum.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/clustering_algorithms.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/clustering_algorithms.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/clusteringspeed.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/clusteringspeed.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/cythonutils.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/cythonutils.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/featurespeed.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/featurespeed.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/metricspeed.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/metricspeed.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/mrf.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/mrf.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/direction_getter.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/direction_getter.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/distances.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/distances.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/fbcmeasures.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/fbcmeasures.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/localtrack.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/localtrack.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/propspeed.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/stopping_criterion.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/streamlinespeed.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/streamlinespeed.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/vox2track.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/vox2track.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/fast_numpy.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/fast_numpy.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/omp.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/omp.cpython-312-aarch64-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/tests/test_fast_numpy.cpython-312-aarch64-linux-gnu.so' dh_numpy3 -ppython3-dipy-lib dh_python3 I: dh_python3 pydist:325: Ignoring complex environment marker: tomli; python_version < "3.11" and extra == "doc" make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild debian/rules execute_before_dh_link-indep make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' rm -fv debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/doctools.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/doctools.js' rm -fv debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/language_data.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/language_data.js' rm -fv debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/searchtools.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/searchtools.js' make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' dh_compress -X.py -X.html -X.css -X.jpg -X.txt -X.js -X.json -X.rtc \ -X.par -X.bin -Xobjects.inv make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' dh_fixperms -O--buildsystem=pybuild debian/rules execute_after_dh_fixperms-arch make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' # Fix a couple of executables neither elf nor scripts. find debian/python3-dipy/usr/lib/python3*/dist-packages/ \ -name '*.py' \ -exec chmod -x '{}' '+' make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' dh_missing -O--buildsystem=pybuild debian/rules override_dh_dwz make[1]: Entering directory '/build/reproducible-path/dipy-1.9.0' dh_dwz || true make[1]: Leaving directory '/build/reproducible-path/dipy-1.9.0' dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Provides field of package python3-dipy-lib: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: Depends field of package python3-dipy: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy-lib: substitution variable ${python3:Provides} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-dipy' in '../python3-dipy_1.9.0-3_all.deb'. dpkg-deb: building package 'python3-dipy-lib' in '../python3-dipy-lib_1.9.0-3_arm64.deb'. dpkg-deb: building package 'python3-dipy-lib-dbgsym' in '../python3-dipy-lib-dbgsym_1.9.0-3_arm64.deb'. dpkg-deb: building package 'python-dipy-doc' in '../python-dipy-doc_1.9.0-3_all.deb'. dpkg-genbuildinfo --build=binary -O../dipy_1.9.0-3_arm64.buildinfo dpkg-genchanges --build=binary -O../dipy_1.9.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from dipy-1.9.0/debian/source/options: --extend-diff-ignore=(^|/)dipy/COMMIT_INFO.txt$ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1505649 and its subdirectories I: Current time: Fri Jul 18 17:20:12 -12 2025 I: pbuilder-time-stamp: 1752902412 Sat Jun 15 22:57:15 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Sat Jun 15 22:57:15 UTC 2024 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Sat Jun 15 23:44:01 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Sat Jun 15 23:44:02 UTC 2024 I: dipy_1.9.0-3_arm64.changes: Format: 1.8 Date: Wed, 22 May 2024 17:19:21 +0200 Source: dipy Binary: python-dipy-doc python3-dipy python3-dipy-lib python3-dipy-lib-dbgsym Architecture: all arm64 Version: 1.9.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: python-dipy-doc - Python library for the analysis of diffusion MRI datasets -- docu python3-dipy - Python library for the analysis of diffusion MRI datasets python3-dipy-lib - Python library for the analysis of diffusion MRI datasets -- Pyth Closes: 1071448 Changes: dipy (1.9.0-3) unstable; urgency=medium . * Team upload. * Skip the test_check_img_shapes on 32-bit systems. Closes: #1071448 Checksums-Sha1: ad97b6fd51adf6ecfe3287e4d28e52d198e4ee94 13456 dipy_1.9.0-3_arm64.buildinfo 1ee816bf0e8a0ba01b4eb9798162bd43602517a1 2792604 python-dipy-doc_1.9.0-3_all.deb c78734ebaadef423bbea3843e66b64720ac7efc6 37817876 python3-dipy-lib-dbgsym_1.9.0-3_arm64.deb 40e33c9db327a8c06b0342008d494e061f21b33c 3375660 python3-dipy-lib_1.9.0-3_arm64.deb dd8732bbd21f27769a3ebf1de19148f3eb9d75a4 3475200 python3-dipy_1.9.0-3_all.deb Checksums-Sha256: e72d01b2db43387ef8218a97c147acbae9e5e98f12d5b2f8dda5b1b890d0dbfd 13456 dipy_1.9.0-3_arm64.buildinfo 74e389d6711f0f2a5041883b1dc8264fbe27324c271b47a231bb531e3d8c7825 2792604 python-dipy-doc_1.9.0-3_all.deb 842887684caf25e099181f2558d9035ec6de4e216452dbcb287de5b4d587641b 37817876 python3-dipy-lib-dbgsym_1.9.0-3_arm64.deb c6735b8deaedb0e8b88fde9e5d5b9c18d64250c76792f70e7437c6edc0703fed 3375660 python3-dipy-lib_1.9.0-3_arm64.deb 9ac975bfad914aad6de858b2bbd31c1436ec4b9ed0dd58d8f84160683f79d0dc 3475200 python3-dipy_1.9.0-3_all.deb Files: 2286708b565ee407028315921060bb5e 13456 python optional dipy_1.9.0-3_arm64.buildinfo 64dacf75abe73ae3b696c8c8044597c4 2792604 doc optional python-dipy-doc_1.9.0-3_all.deb 869d50c768013b11ca84bc8d2b615b9b 37817876 debug optional python3-dipy-lib-dbgsym_1.9.0-3_arm64.deb 1ea1114b364306a6d770268319c0b2d3 3375660 python optional python3-dipy-lib_1.9.0-3_arm64.deb ae57181f5f3160c477613a17478b3092 3475200 python optional python3-dipy_1.9.0-3_all.deb Sat Jun 15 23:44:03 UTC 2024 I: diffoscope 271 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_14-46475.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.DpKAkTpN/dipy_1.9.0-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.DpKAkTpN/dipy_1.9.0-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.DpKAkTpN/dipy_1.9.0-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.DpKAkTpN/b1/dipy_1.9.0-3_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.DpKAkTpN/b2/dipy_1.9.0-3_arm64.changes ## close_archive (total time: 0.004s) 0.003s 176 calls diffoscope.comparators.xz.XzContainer 0.001s 160 calls diffoscope.comparators.deb.DebTarContainer 0.000s 12 calls diffoscope.comparators.deb.DebContainer 0.000s 16 calls diffoscope.comparators.tar.TarContainer ## command (total time: 4519.765s) 1911.552s 75090 calls readelf 1518.886s 8149 calls diff 594.511s 13728 calls objdump 257.053s 156 calls objcopy 229.560s 176 calls xz 8.156s 1727 calls strings 0.019s 156 calls cmp (internal) 0.014s 2 calls cmp 0.013s 2 calls cmp (external) ## compare_files (cumulative) (total time: 11810.618s) 2212.776s 1 call abc.DotChangesFile 2212.686s 2 calls abc.DebFile 2212.379s 4 calls abc.XzFile 2208.511s 2 calls abc.DebDataTarFile 2203.256s 157 calls abc.ElfFile 714.223s 624 calls diffoscope.comparators.elf.ElfCodeSection 43.226s 2419 calls diffoscope.comparators.elf.ElfSection 2.229s 159 calls diffoscope.comparators.elf.ElfStringSection 1.184s 78 calls diffoscope.comparators.elf.MonkeyPatchedElfSection 0.104s 2 calls abc.TarFile 0.022s 1 call abc.TextFile 0.020s 2 calls abc.Md5sumsFile ## container_extract (total time: 248.339s) 229.574s 176 calls diffoscope.comparators.xz.XzContainer 18.298s 476 calls diffoscope.comparators.deb.DebTarContainer 0.452s 180 calls diffoscope.comparators.deb.DebContainer 0.015s 20 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 4.325s) 4.325s 1555 calls linediff ## has_same_content_as (total time: 0.077s) 0.029s 157 calls abc.ElfFile 0.022s 2419 calls diffoscope.comparators.elf.ElfSection 0.015s 4 calls abc.DebFile 0.006s 624 calls diffoscope.comparators.elf.ElfCodeSection 0.001s 159 calls diffoscope.comparators.elf.ElfStringSection 0.001s 4 calls abc.TextFile 0.001s 78 calls diffoscope.comparators.elf.MonkeyPatchedElfSection 0.001s 4 calls abc.Md5sumsFile 0.001s 2 calls abc.DebDataTarFile 0.000s 4 calls abc.XzFile 0.000s 2 calls abc.TarFile 0.000s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 1 call abc.DotChangesFile ## main (total time: 2315.701s) 2315.693s 2 calls outputs 0.009s 1 call cleanup ## open_archive (total time: 0.004s) 0.002s 160 calls diffoscope.comparators.deb.DebTarContainer 0.002s 176 calls diffoscope.comparators.xz.XzContainer 0.000s 16 calls diffoscope.comparators.tar.TarContainer 0.000s 12 calls diffoscope.comparators.deb.DebContainer ## output (total time: 102.047s) 101.995s 1 call html 0.035s 1 call text 0.017s 1 call json ## recognizes (total time: 248.648s) 226.944s 2560 calls diffoscope.comparators.utils.archive.ArchiveMember 21.058s 25292 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.521s 12 calls diffoscope.comparators.binary.FilesystemFile 0.125s 432 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.976s) 0.976s 3459 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 38min 36.052s CPU time consumed: 49min 50.069s Sun Jun 16 00:22:41 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Sun Jun 16 00:22:41 UTC 2024 E: dipy failed to build reproducibly in unstable on arm64. Sun Jun 16 00:22:44 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Jun 16 00:22:44 UTC 2024 I: Submitting 16K b1/dipy_1.9.0-3_arm64.buildinfo.asc Sun Jun 16 00:22:44 UTC 2024 I: Submitting 16K b2/dipy_1.9.0-3_arm64.buildinfo.asc Sun Jun 16 00:22:45 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Jun 16 00:22:45 UTC 2024 I: Done submitting .buildinfo files. Sun Jun 16 00:22:45 UTC 2024 I: Removing signed dipy_1.9.0-3_arm64.buildinfo.asc files: removed './b1/dipy_1.9.0-3_arm64.buildinfo.asc' removed './b2/dipy_1.9.0-3_arm64.buildinfo.asc'