Wed May 15 07:29:19 UTC 2024 I: starting to build btllib/unstable/arm64 on jenkins on '2024-05-15 07:29' Wed May 15 07:29:19 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_23/41537/console.log Wed May 15 07:29:19 UTC 2024 I: Downloading source for unstable/btllib=1.4.10+dfsg-1 --2024-05-15 07:29:19-- http://deb.debian.org/debian/pool/main/b/btllib/btllib_1.4.10%2bdfsg-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2161 (2.1K) [text/prs.lines.tag] Saving to: ‘btllib_1.4.10+dfsg-1.dsc’ 0K .. 100% 204M=0s 2024-05-15 07:29:19 (204 MB/s) - ‘btllib_1.4.10+dfsg-1.dsc’ saved [2161/2161] Wed May 15 07:29:19 UTC 2024 I: btllib_1.4.10+dfsg-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: btllib Binary: libbtllib-dev, btllib-tools Architecture: any Version: 1.4.10+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/bcgsc/btllib Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/btllib Vcs-Git: https://salsa.debian.org/med-team/btllib.git Build-Depends: debhelper-compat (= 13), dh-exec, meson, ninja-build, libcpptoml-dev, libomp-dev, samtools Package-List: btllib-tools deb science optional arch=any libbtllib-dev deb libdevel optional arch=any-amd64,arm64,mips64el,ppc64el,s390x,ia64,ppc64,riscv64,sparc64,alpha Checksums-Sha1: b4dc0dbae9ca4543be0ecf20f48396fadcdeb6a2 209360 btllib_1.4.10+dfsg.orig.tar.xz 0551566c884a2b7acb54d90bc8aee15c56db73b7 3268 btllib_1.4.10+dfsg-1.debian.tar.xz Checksums-Sha256: 6eba5c5626680c3edf8dda9de6af05b401a560986ea77770c14c053e7ba9743c 209360 btllib_1.4.10+dfsg.orig.tar.xz cce781d2defaf1b8192af143662f5dc1fc172f3a44c3d977e08dc33bc57536ff 3268 btllib_1.4.10+dfsg-1.debian.tar.xz Files: e3ce32eaf3f812264056fe26758b7483 209360 btllib_1.4.10+dfsg.orig.tar.xz 79076576244cd8561bfda4c8e55b5b45 3268 btllib_1.4.10+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmPbc0sRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFPzw//TYsmwEOKs9yojPq6Ee9leadja7dxJSjy QSQGunYss5zzGubViyhMZKwtWQrhxj7eMtWDEcZzruC76CNNEUuSkgKQm7PimdSM INSOx0iFAJX0qcHadLrdqP3lQU6ZX4fIlD/KSZ8vTU+Cv+1jJhrj2lByatE3r8TO ZgnXLaOuIBLwrbrgDkwdhNWvs1G3plcCY6WWObpro4CCaIrLGQ0lv3Rl4ucKMgAs wplM9vQm9GCHekXHU9/iXU5nlGC/161CaXn0PIvhw78LMcVGnUeRLavbhoNgHjlE lrrU2zshltXbqjq7Y3ccMSM8Sqe9u3U6NJ2emfixQFx6YWFaEJ5UgWAvwndg9qwn YxGIBco9iH3wpqGgYX8nkSiHlptK7WLsSR1Z48Vw2rfJ0upDIYAfvMsVfG9FMs1r vNhwCiBtxnbkjhp79laA5P7ouMPziROuMzBkk+HMAaPPfyswFeIJ7U3xDLQ/Fdf2 JAn1+nTxKoNRo98GgiJTlID/OOYD9ppi0xsfaJrcnsQii54J77LnapLbdcCZPiJt mzPAPPRLP+fZFFm3tkE0iJ6PQeVZPKtygfre3Y6iCjPf1PIvrSk9GogBYTOoyPAh lfOLCNPS2Ayunj/CqQ6pQmROGrw8f0pdvMCz0NL+/Wz4SJAAC8QWWUlDKY/lnMnA /1BdXWdxUGs= =1qap -----END PGP SIGNATURE----- Wed May 15 07:29:19 UTC 2024 I: Checking whether the package is not for us Wed May 15 07:29:19 UTC 2024 I: Starting 1st build on remote node codethink03-arm64.debian.net. Wed May 15 07:29:19 UTC 2024 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Wed May 15 07:30:18 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Jun 17 01:52:22 -12 2025 I: pbuilder-time-stamp: 1750168342 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [btllib_1.4.10+dfsg-1.dsc] I: copying [./btllib_1.4.10+dfsg.orig.tar.xz] I: copying [./btllib_1.4.10+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Feb 2 08:24:43 2023 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./btllib_1.4.10+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting btllib in btllib-1.4.10+dfsg dpkg-source: info: unpacking btllib_1.4.10+dfsg.orig.tar.xz dpkg-source: info: unpacking btllib_1.4.10+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying find_object_files_at_right_loc.patch dpkg-source: info: applying use_debian_packaged_libs.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1668729/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='0f73021c3e0e4531965e27218414ea68' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1668729' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Rty6f0YN/pbuilderrc_3zup --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Rty6f0YN/b1 --logfile b1/build.log btllib_1.4.10+dfsg-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-21-cloud-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 15 14:06 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1668729/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-exec, meson, ninja-build, libcpptoml-dev, libomp-dev, samtools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19744 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on meson; however: Package meson is not installed. pbuilder-satisfydepends-dummy depends on ninja-build; however: Package ninja-build is not installed. pbuilder-satisfydepends-dummy depends on libcpptoml-dev; however: Package libcpptoml-dev is not installed. pbuilder-satisfydepends-dummy depends on libomp-dev; however: Package libomp-dev is not installed. pbuilder-satisfydepends-dummy depends on samtools; however: Package samtools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libbsd0{a} libcom-err2{a} libcpptoml-dev{a} libcurl3t64-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libhts3t64{a} libhtscodecs2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libllvm16t64{a} libmagic-mgc{a} libmagic1t64{a} libncurses6{a} libnghttp2-14{a} libomp-16-dev{a} libomp-dev{a} libomp5-16t64{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} libz3-4{a} m4{a} man-db{a} media-types{a} meson{a} netbase{a} ninja-build{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} samtools{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 79 newly installed, 0 to remove and 0 not upgraded. Need to get 59.9 MB of archives. After unpacking 296 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main arm64 libpython3.11-minimal arm64 3.11.9-1 [813 kB] Get: 2 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.6.2-1 [88.7 kB] Get: 3 http://deb.debian.org/debian unstable/main arm64 python3.11-minimal arm64 3.11.9-1 [1767 kB] Get: 4 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main arm64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main arm64 tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-4 [157 kB] Get: 10 http://deb.debian.org/debian unstable/main arm64 libpython3.11-stdlib arm64 3.11.9-1 [1775 kB] Get: 11 http://deb.debian.org/debian unstable/main arm64 python3.11 arm64 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get: 15 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 16 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 17 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 18 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get: 19 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 20 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-4 [1130 kB] Get: 21 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.40.1-1 [93.2 kB] Get: 22 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 23 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.12.1-1 [1394 kB] Get: 24 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 25 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get: 26 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 27 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 28 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.21-14 [496 kB] Get: 29 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 30 http://deb.debian.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get: 31 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian unstable/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 34 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 35 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 36 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 37 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 38 http://deb.debian.org/debian unstable/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 39 http://deb.debian.org/debian unstable/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b3 [624 kB] Get: 40 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get: 41 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 42 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.15.3 [901 kB] Get: 44 http://deb.debian.org/debian unstable/main arm64 dh-exec arm64 0.29 [25.4 kB] Get: 45 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b3 [295 kB] Get: 46 http://deb.debian.org/debian unstable/main arm64 libbsd0 arm64 0.12.2-1 [129 kB] Get: 47 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.1~rc2-1 [22.5 kB] Get: 48 http://deb.debian.org/debian unstable/main arm64 libcpptoml-dev all 0.1.1-3 [180 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.20.1-6+b1 [33.0 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.20.1-6+b1 [80.5 kB] Get: 51 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get: 52 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.20.1-6+b1 [315 kB] Get: 53 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.20.1-6+b1 [124 kB] Get: 54 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-6 [20.1 kB] Get: 55 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-6 [55.3 kB] Get: 56 http://deb.debian.org/debian unstable/main arm64 libldap-2.5-0 arm64 2.5.17+dfsg-1 [173 kB] Get: 57 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.61.0-1+b1 [71.0 kB] Get: 58 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB] Get: 59 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB] Get: 60 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.0-4.1+b2 [207 kB] Get: 61 http://deb.debian.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.7.1-5 [405 kB] Get: 62 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.20-1 [41.5 kB] Get: 63 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20230828-1+b1 [89.1 kB] Get: 64 http://deb.debian.org/debian unstable/main arm64 libhtscodecs2 arm64 1.6.0-1+b1 [71.6 kB] Get: 65 http://deb.debian.org/debian unstable/main arm64 libhts3t64 arm64 1.19+ds-1.1+b1 [413 kB] Get: 66 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.8.12-3.1+b2 [6508 kB] Get: 67 http://deb.debian.org/debian unstable/main arm64 libllvm16t64 arm64 1:16.0.6-27 [20.7 MB] Get: 68 http://deb.debian.org/debian unstable/main arm64 libncurses6 arm64 6.5-2 [95.7 kB] Get: 69 http://deb.debian.org/debian unstable/main arm64 libomp5-16t64 arm64 1:16.0.6-27 [521 kB] Get: 70 http://deb.debian.org/debian unstable/main arm64 libpython3.11t64 arm64 3.11.9-1 [1814 kB] Get: 71 http://deb.debian.org/debian unstable/main arm64 libomp-16-dev arm64 1:16.0.6-27 [780 kB] Get: 72 http://deb.debian.org/debian unstable/main arm64 libomp-dev arm64 1:16.0-58.1 [4964 B] Get: 73 http://deb.debian.org/debian unstable/main arm64 ninja-build arm64 1.12.1-1 [128 kB] Get: 74 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 75 http://deb.debian.org/debian unstable/main arm64 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 76 http://deb.debian.org/debian unstable/main arm64 python3-distutils all 3.12.3-1 [131 kB] Get: 77 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 68.1.2-2 [468 kB] Get: 78 http://deb.debian.org/debian unstable/main arm64 meson all 1.4.0-2 [603 kB] Get: 79 http://deb.debian.org/debian unstable/main arm64 samtools arm64 1.19.2-1+b1 [617 kB] Fetched 59.9 MB in 0s (153 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:arm64. 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/btllib-1.4.10+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../btllib_1.4.10+dfsg-1_source.changes dpkg-buildpackage: info: source package btllib dpkg-buildpackage: info: source version 1.4.10+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/aarch64-linux-gnu -Dpython.bytecompile=-1 The Meson build system Version: 1.4.0 Source dir: /build/reproducible-path/btllib-1.4.10+dfsg Build dir: /build/reproducible-path/btllib-1.4.10+dfsg/obj-aarch64-linux-gnu Build type: native build Project name: btllib Project version: 1.4.9 C++ compiler for the host machine: c++ (gcc 13.2.0 "c++ (Debian 13.2.0-24) 13.2.0") C++ linker for the host machine: c++ ld.bfd 2.42 Host machine cpu family: aarch64 Host machine cpu: aarch64 Configuring config.hpp using configuration Run-time dependency threads found: YES Run-time dependency OpenMP found: YES 4.5 Program samtools found: YES (/usr/bin/samtools) Program gzip found: YES (/usr/bin/gzip) Program xz found: YES (/usr/bin/xz) Program bzip2 found: YES (/usr/bin/bzip2) Program tar found: YES (/usr/bin/tar) Program swig found: NO Program doxygen found: NO WARNING: You should add the boolean check kwarg to the run_command call. It currently defaults to false, but it will default to true in future releases of meson. See also: https://github.com/mesonbuild/meson/issues/9300 Program python3 found: YES (/usr/bin/python3) Program python3-config found: NO Message: python3-config not found, skipping Python wrappers. Build targets in project: 23 btllib 1.4.9 User defined options buildtype : plain libdir : lib/aarch64-linux-gnu localstatedir : /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload python.bytecompile: -1 Found ninja-1.12.1 at /usr/bin/ninja dh_auto_build cd obj-aarch64-linux-gnu && LC_ALL=C.UTF-8 ninja -j12 -v [1/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fasta_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fasta_module.cpp.o.d -o 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-D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fastq_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fastq_module.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fastq_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader_fastq_module.cpp [5/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_gfa2_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_gfa2_module.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_gfa2_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader_gfa2_module.cpp [6/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq.cpp [7/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_consts.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_consts.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_consts.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/nthash_consts.cpp [8/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_sam_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_sam_module.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_sam_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader_sam_module.cpp [9/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_cstring.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_cstring.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_cstring.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/cstring.cpp [10/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_writer.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_writer.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_writer.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_writer.cpp [11/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_status.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_status.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_status.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/status.cpp [12/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_util.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_util.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_util.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/util.cpp [13/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_lowlevel.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_lowlevel.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_lowlevel.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/nthash_lowlevel.cpp [14/51] c++ -Itests/util_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/util_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_util.cpp.o -MF tests/util_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_util.cpp.o.d -o tests/util_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_util.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/util.cpp [15/51] c++ -Itests/seq_reader_gfa2_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_gfa2_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_gfa2_module.cpp.o -MF tests/seq_reader_gfa2_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_gfa2_module.cpp.o.d -o tests/seq_reader_gfa2_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_gfa2_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_gfa2_module.cpp [16/51] c++ -Itests/seq_reader_sam_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_sam_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_sam_module.cpp.o -MF tests/seq_reader_sam_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_sam_module.cpp.o.d -o tests/seq_reader_sam_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_sam_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_sam_module.cpp [17/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_data_stream.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_data_stream.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_data_stream.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/data_stream.cpp [18/51] c++ -Itests/seq_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq.cpp.o -MF tests/seq_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq.cpp.o.d -o tests/seq_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq.cpp [19/51] c++ -Itests/seq_reader_fasta_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fasta_module.cpp.o -MF tests/seq_reader_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fasta_module.cpp.o.d -o tests/seq_reader_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fasta_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_fasta_module.cpp [20/51] c++ -Itests/seq_reader_multiline_fasta_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_multiline_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fasta_module.cpp.o -MF tests/seq_reader_multiline_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fasta_module.cpp.o.d -o tests/seq_reader_multiline_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fasta_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_multiline_fasta_module.cpp [21/51] c++ -Itests/seq_reader_multiline_fastq_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_multiline_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fastq_module.cpp.o -MF tests/seq_reader_multiline_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fastq_module.cpp.o.d -o tests/seq_reader_multiline_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fastq_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_multiline_fastq_module.cpp [22/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/nthash.cpp [23/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader.cpp [24/51] c++ -Itests/cstring_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/cstring_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_cstring.cpp.o -MF tests/cstring_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_cstring.cpp.o.d -o tests/cstring_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_cstring.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/cstring.cpp [25/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_process_pipeline.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_process_pipeline.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_process_pipeline.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/process_pipeline.cpp [26/51] c++ -Itests/seq_writer_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_writer_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_writer.cpp.o -MF tests/seq_writer_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_writer.cpp.o.d -o tests/seq_writer_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_writer.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_writer.cpp [27/51] c++ -Itests/data_stream_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/data_stream_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_data_stream.cpp.o -MF tests/data_stream_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_data_stream.cpp.o.d -o tests/data_stream_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_data_stream.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/data_stream.cpp [28/51] c++ -Itests/seq_reader_fastq_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fastq_module.cpp.o -MF tests/seq_reader_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fastq_module.cpp.o.d -o tests/seq_reader_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fastq_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_fastq_module.cpp [29/51] c++ -Itests/nthash_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/nthash_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_nthash.cpp.o -MF tests/nthash_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_nthash.cpp.o.d -o tests/nthash_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_nthash.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/nthash.cpp [30/51] c++ -Itests/bloom_filter_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_bloom_filter.cpp.o -MF tests/bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_bloom_filter.cpp.o.d -o tests/bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_bloom_filter.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/bloom_filter.cpp [31/51] c++ -Irecipes/indexlr.p -Irecipes -I../recipes -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ recipes/indexlr.p/_build_reproducible-path_btllib-1.4.10+dfsg_recipes_indexlr.cpp.o -MF recipes/indexlr.p/_build_reproducible-path_btllib-1.4.10+dfsg_recipes_indexlr.cpp.o.d -o recipes/indexlr.p/_build_reproducible-path_btllib-1.4.10+dfsg_recipes_indexlr.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/recipes/indexlr.cpp [32/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_bloom_filter.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_bloom_filter.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_bloom_filter.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/bloom_filter.cpp [33/51] rm -f libbtllib.a && gcc-ar csrD libbtllib.a libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_util.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_status.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_writer.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_sam_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fastq_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fasta_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_gfa2_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fastq_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fasta_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_process_pipeline.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_lowlevel.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_consts.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_data_stream.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_cstring.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_bloom_filter.cpp.o [34/51] c++ -o tests/seq_reader_gfa2_module_test tests/seq_reader_gfa2_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_gfa2_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [35/51] c++ -o tests/util_test tests/util_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_util.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [36/51] c++ -o tests/seq_test tests/seq_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [37/51] c++ -o tests/seq_reader_multiline_fasta_module_test tests/seq_reader_multiline_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fasta_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [38/51] c++ -o tests/seq_reader_multiline_fastq_module_test tests/seq_reader_multiline_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fastq_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [39/51] c++ -o tests/seq_reader_sam_module_test tests/seq_reader_sam_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_sam_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [40/51] c++ -o tests/seq_reader_fasta_module_test tests/seq_reader_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fasta_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [41/51] c++ -o tests/seq_reader_fastq_module_test tests/seq_reader_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fastq_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [42/51] c++ -o tests/seq_writer_test tests/seq_writer_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_writer.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [43/51] c++ -o recipes/indexlr recipes/indexlr.p/_build_reproducible-path_btllib-1.4.10+dfsg_recipes_indexlr.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [44/51] c++ -o tests/cstring_test tests/cstring_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_cstring.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [45/51] c++ -o tests/nthash_test tests/nthash_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_nthash.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [46/51] c++ -o tests/data_stream_test tests/data_stream_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_data_stream.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [47/51] c++ -o tests/bloom_filter_test tests/bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_bloom_filter.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [48/51] c++ -Itests/counting_bloom_filter_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/counting_bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_counting_bloom_filter.cpp.o -MF tests/counting_bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_counting_bloom_filter.cpp.o.d -o tests/counting_bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_counting_bloom_filter.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/counting_bloom_filter.cpp [49/51] c++ -o tests/counting_bloom_filter_test tests/counting_bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_counting_bloom_filter.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp [50/51] c++ -Itests/indexlr_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_GLIBCXX_ASSERTIONS=1 -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/indexlr_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_indexlr.cpp.o -MF tests/indexlr_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_indexlr.cpp.o.d -o tests/indexlr_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_indexlr.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/indexlr.cpp [51/51] c++ -o tests/indexlr_test tests/indexlr_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_indexlr.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/btllib-1.4.10+dfsg' cp -a tests/ obj-*/ dh_auto_test cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb LC_ALL=C.UTF-8 MESON_TESTTHREADS=12 meson test ninja: Entering directory `/build/reproducible-path/btllib-1.4.10+dfsg/obj-aarch64-linux-gnu' ninja: no work to do. 1/15 util OK 0.15s 2/15 seq_reader_gfa2_module OK 0.10s 3/15 seq OK 0.05s 4/15 nthash OK 0.09s 5/15 cstring OK 0.05s 6/15 seq_reader_fasta_module OK 0.13s 7/15 counting_bloom_filter OK 0.06s 8/15 bloom_filter OK 0.07s 9/15 data_stream OK 0.11s 10/15 seq_reader_multiline_fastq_module OK 0.25s 11/15 seq_reader_multiline_fasta_module OK 0.25s 12/15 indexlr OK 0.20s 13/15 seq_reader_sam_module OK 0.36s 14/15 seq_reader_fastq_module OK 0.49s 15/15 seq_writer OK 2.63s Ok: 15 Expected Fail: 0 Fail: 0 Unexpected Pass: 0 Skipped: 0 Timeout: 0 Full log written to /build/reproducible-path/btllib-1.4.10+dfsg/obj-aarch64-linux-gnu/meson-logs/testlog.txt make[1]: Leaving directory '/build/reproducible-path/btllib-1.4.10+dfsg' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-aarch64-linux-gnu && DESTDIR=/build/reproducible-path/btllib-1.4.10\+dfsg/debian/tmp LC_ALL=C.UTF-8 ninja install [0/1] Installing files. Installing libbtllib.a to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/lib Installing recipes/indexlr to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/bin Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/util.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/status.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/seq_writer.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/seq_reader_sam_module.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/seq_reader_multiline_fastq_module.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/seq_reader_multiline_fasta_module.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/seq_reader_gfa2_module.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/seq_reader_fastq_module.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/seq_reader_fasta_module.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/seq_reader.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/seq.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/process_pipeline.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/order_queue.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/nthash_lowlevel.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/nthash_consts.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/nthash.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/mi_bloom_filter.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/indexlr.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/graph.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/data_stream.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/cstring.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/counting_bloom_filter.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Installing /build/reproducible-path/btllib-1.4.10+dfsg/include/btllib/bloom_filter.hpp to /build/reproducible-path/btllib-1.4.10+dfsg/debian/tmp/usr/include/btllib Running custom install script '/build/reproducible-path/btllib-1.4.10+dfsg/scripts/install-cpptoml' Running custom install script '/build/reproducible-path/btllib-1.4.10+dfsg/scripts/install-sdsl-lite' dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libbtllib-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'libbtllib-dev' in '../libbtllib-dev_1.4.10+dfsg-1_arm64.deb'. dpkg-deb: building package 'btllib-tools' in '../btllib-tools_1.4.10+dfsg-1_arm64.deb'. dpkg-deb: building package 'btllib-tools-dbgsym' in '../btllib-tools-dbgsym_1.4.10+dfsg-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../btllib_1.4.10+dfsg-1_arm64.buildinfo dpkg-genchanges --build=binary -O../btllib_1.4.10+dfsg-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1668729 and its subdirectories I: Current time: Tue Jun 17 01:53:15 -12 2025 I: pbuilder-time-stamp: 1750168395 Wed May 15 07:30:19 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Wed May 15 07:30:19 UTC 2024 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Wed May 15 07:31:21 UTC 2024 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Wed May 15 07:31:21 UTC 2024 I: btllib_1.4.10+dfsg-1_arm64.changes: Format: 1.8 Date: Thu, 02 Feb 2023 08:10:47 +0100 Source: btllib Binary: btllib-tools btllib-tools-dbgsym libbtllib-dev Architecture: arm64 Version: 1.4.10+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: btllib-tools - Bioinformatics Technology Lab common code library tools libbtllib-dev - Bioinformatics Technology Lab common code library Closes: 1022772 Changes: btllib (1.4.10+dfsg-1) unstable; urgency=medium . * Exclude 32bit architectures since upstream confirmed these are not supported. Closes: #1022772 * New upstream version * Standards-Version: 4.6.2 (routine-update) Checksums-Sha1: 8ff5dbba8da1e12e1a50bfdeb148404d98ef3c39 2297560 btllib-tools-dbgsym_1.4.10+dfsg-1_arm64.deb 48d955337f06206ef6429ee0355d2c1b06294abe 137864 btllib-tools_1.4.10+dfsg-1_arm64.deb 3f3530139d3d92ed5e11c3aee57a6596297f57d2 7112 btllib_1.4.10+dfsg-1_arm64.buildinfo 675ff64c4048dadb8a6798104ade05b68c98da03 185276 libbtllib-dev_1.4.10+dfsg-1_arm64.deb Checksums-Sha256: 2409ac5da270890c0b4968358c5a212a4b71febbbe30d8b0a4df9ea00a7c1090 2297560 btllib-tools-dbgsym_1.4.10+dfsg-1_arm64.deb fae3a96de7e2a529f0a54bf149804ac41d06f3b2ad2918592ac3ab646665f891 137864 btllib-tools_1.4.10+dfsg-1_arm64.deb 59c5d401e26be4cc4ec187fed4a59a3693c256c3b15df62800f4c95aa68e27df 7112 btllib_1.4.10+dfsg-1_arm64.buildinfo 2c7d3ea155346880ee304b7258ddcecf5a8829339f13761a77a6d15f223792fc 185276 libbtllib-dev_1.4.10+dfsg-1_arm64.deb Files: e13e04cdf47e2ca485c6197617563081 2297560 debug optional btllib-tools-dbgsym_1.4.10+dfsg-1_arm64.deb fcd5191597e02277ed53c35b0c56745e 137864 science optional btllib-tools_1.4.10+dfsg-1_arm64.deb 67de2759f5045ee6c825a6465af3365a 7112 science optional btllib_1.4.10+dfsg-1_arm64.buildinfo 9e4150aab190d53dff88fcfee264436f 185276 libdevel optional libbtllib-dev_1.4.10+dfsg-1_arm64.deb Wed May 15 07:31:23 UTC 2024 I: diffoscope 266 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_23-41537.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.Rty6f0YN/btllib_1.4.10+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.Rty6f0YN/btllib_1.4.10+dfsg-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.Rty6f0YN/btllib_1.4.10+dfsg-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.Rty6f0YN/b1/btllib_1.4.10+dfsg-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.Rty6f0YN/b2/btllib_1.4.10+dfsg-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.462s) 0.462s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.051s) 0.051s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 811ms CPU time consumed: 811ms Wed May 15 07:31:24 UTC 2024 I: diffoscope 266 found no differences in the changes files, and a .buildinfo file also exists. Wed May 15 07:31:24 UTC 2024 I: btllib from unstable built successfully and reproducibly on arm64. Wed May 15 07:31:25 UTC 2024 I: Submitting .buildinfo files to external archives: Wed May 15 07:31:25 UTC 2024 I: Submitting 8.0K b1/btllib_1.4.10+dfsg-1_arm64.buildinfo.asc Wed May 15 07:31:26 UTC 2024 I: Submitting 8.0K b2/btllib_1.4.10+dfsg-1_arm64.buildinfo.asc Wed May 15 07:31:27 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed May 15 07:31:27 UTC 2024 I: Done submitting .buildinfo files. Wed May 15 07:31:27 UTC 2024 I: Removing signed btllib_1.4.10+dfsg-1_arm64.buildinfo.asc files: removed './b1/btllib_1.4.10+dfsg-1_arm64.buildinfo.asc' removed './b2/btllib_1.4.10+dfsg-1_arm64.buildinfo.asc'