Wed Mar 5 17:01:17 UTC 2025 I: starting to build python-biopython/unstable/amd64 on jenkins on '2025-03-05 17:01'
Wed Mar 5 17:01:17 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_19/47520/console.log
Wed Mar 5 17:01:17 UTC 2025 I: Downloading source for unstable/python-biopython=1.85+dfsg-2
--2025-03-05 17:01:17-- http://deb.debian.org/debian/pool/main/p/python-biopython/python-biopython_1.85%2bdfsg-2.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 3439 (3.4K) [text/prs.lines.tag]
Saving to: ‘python-biopython_1.85+dfsg-2.dsc’
0K ... 100% 386M=0s
2025-03-05 17:01:17 (386 MB/s) - ‘python-biopython_1.85+dfsg-2.dsc’ saved [3439/3439]
Wed Mar 5 17:01:17 UTC 2025 I: python-biopython_1.85+dfsg-2.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: python-biopython
Binary: python3-biopython, python-biopython-doc, python3-biopython-sql
Architecture: any all
Version: 1.85+dfsg-2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>, Andreas Tille <tille@debian.org>, Étienne Mollier <emollier@debian.org>
Homepage: https://biopython.org
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/python-biopython
Vcs-Git: https://salsa.debian.org/med-team/python-biopython.git
Testsuite: autopkgtest
Testsuite-Triggers: @builddeps@, python3-all, python3-setuptools
Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev:native, libpython3-all-dev, python3-numpy, flex, python3-reportlab (>= 4.0.4-1~) <!nocheck>, hevea, texlive-latex-base, texlive-latex-extra, texlive-fonts-recommended, bwa <!nocheck>, clustalo <!nocheck>, clustalw [any-amd64] <!nocheck>, dialign <!nocheck>, dssp <!nocheck>, emboss [!armel !armhf !i386 !hppa !m68k !powerpc !s390x !sh4] <!nocheck>, fasttree <!nocheck>, mafft <!nocheck>, muscle3 [i386 amd64 x32] <!nocheck>, ncbi-blast+ <!nocheck>, phylip <!nocheck>, phyml [any-amd64] <!nocheck>, prank <!nocheck>, probcons <!nocheck>, python3-networkx <!nocheck>, python3-numpydoc <!nodoc>, python3-mysqldb <!nocheck>, python3-matplotlib <!nocheck>, python3-mmtf <!nocheck>, python3-pil <!nocheck>, python3-rdflib <!nocheck>, python3-psycopg2 [any-amd64] <!nocheck>, python3-pygments <!nocheck>, python3-igraph <!nocheck>, python3-scipy <!nocheck>, python3-setuptools, python3-sphinx <!nodoc>, python3-sphinx-rtd-theme <!nodoc>, raxml [any-amd64 any-i386] <!nocheck>, samtools [any-amd64] <!nocheck>, t-coffee <!nocheck>, wise <!nocheck>
Package-List:
python-biopython-doc deb doc optional arch=all
python3-biopython deb python optional arch=any
python3-biopython-sql deb python optional arch=all
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Wed Mar 5 17:01:17 UTC 2025 I: Checking whether the package is not for us
Wed Mar 5 17:01:17 UTC 2025 I: Starting 1st build on remote node ionos1-amd64.debian.net.
Wed Mar 5 17:01:17 UTC 2025 I: Preparing to do remote build '1' on ionos1-amd64.debian.net.
Wed Mar 5 17:37:54 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Wed Mar 5 05:01:19 -12 2025
I: pbuilder-time-stamp: 1741194079
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [python-biopython_1.85+dfsg-2.dsc]
I: copying [./python-biopython_1.85+dfsg.orig.tar.xz]
I: copying [./python-biopython_1.85+dfsg-2.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./python-biopython_1.85+dfsg-2.dsc: unsupported subcommand
dpkg-source: info: extracting python-biopython in python-biopython-1.85+dfsg
dpkg-source: info: unpacking python-biopython_1.85+dfsg.orig.tar.xz
dpkg-source: info: unpacking python-biopython_1.85+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying remove_mathml-qname.patch
dpkg-source: info: applying privacy_breach.patch
dpkg-source: info: applying privacy_breach_ie9.patch
dpkg-source: info: applying croak-on-muscle5.patch
dpkg-source: info: applying muscle3.patch
dpkg-source: info: applying skip-scipy-in-codonalign.patch
dpkg-source: info: applying fix-type-cast-i386.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/2560911/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='amd64'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 '
DISTRIBUTION='unstable'
HOME='/root'
HOST_ARCH='amd64'
IFS='
'
INVOCATION_ID='a989144738024b0c8991687b09a84f59'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='2560911'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.UMO7xJdH/pbuilderrc_uoxz --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.UMO7xJdH/b1 --logfile b1/build.log python-biopython_1.85+dfsg-2.dsc'
SUDO_GID='110'
SUDO_UID='105'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://46.16.76.132:3128'
I: uname -a
Linux ionos1-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/2560911/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev:native, libpython3-all-dev, python3-numpy, flex, python3-reportlab (>= 4.0.4-1~), hevea, texlive-latex-base, texlive-latex-extra, texlive-fonts-recommended, bwa, clustalo, clustalw, dialign, dssp, emboss, fasttree, mafft, muscle3, ncbi-blast+, phylip, phyml, prank, probcons, python3-networkx, python3-numpydoc, python3-mysqldb, python3-matplotlib, python3-mmtf, python3-pil, python3-rdflib, python3-psycopg2, python3-pygments, python3-igraph, python3-scipy, python3-setuptools, python3-sphinx, python3-sphinx-rtd-theme, raxml, samtools, t-coffee, wise
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19783 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
Package dh-sequence-python3 is not installed.
pbuilder-satisfydepends-dummy depends on python3-all-dev:native.
pbuilder-satisfydepends-dummy depends on libpython3-all-dev; however:
Package libpython3-all-dev is not installed.
pbuilder-satisfydepends-dummy depends on python3-numpy; however:
Package python3-numpy is not installed.
pbuilder-satisfydepends-dummy depends on flex; however:
Package flex is not installed.
pbuilder-satisfydepends-dummy depends on python3-reportlab (>= 4.0.4-1~); however:
Package python3-reportlab is not installed.
pbuilder-satisfydepends-dummy depends on hevea; however:
Package hevea is not installed.
pbuilder-satisfydepends-dummy depends on texlive-latex-base; however:
Package texlive-latex-base is not installed.
pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however:
Package texlive-latex-extra is not installed.
pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however:
Package texlive-fonts-recommended is not installed.
pbuilder-satisfydepends-dummy depends on bwa; however:
Package bwa is not installed.
pbuilder-satisfydepends-dummy depends on clustalo; however:
Package clustalo is not installed.
pbuilder-satisfydepends-dummy depends on clustalw; however:
Package clustalw is not installed.
pbuilder-satisfydepends-dummy depends on dialign; however:
Package dialign is not installed.
pbuilder-satisfydepends-dummy depends on dssp; however:
Package dssp is not installed.
pbuilder-satisfydepends-dummy depends on emboss; however:
Package emboss is not installed.
pbuilder-satisfydepends-dummy depends on fasttree; however:
Package fasttree is not installed.
pbuilder-satisfydepends-dummy depends on mafft; however:
Package mafft is not installed.
pbuilder-satisfydepends-dummy depends on muscle3; however:
Package muscle3 is not installed.
pbuilder-satisfydepends-dummy depends on ncbi-blast+; however:
Package ncbi-blast+ is not installed.
pbuilder-satisfydepends-dummy depends on phylip; however:
Package phylip is not installed.
pbuilder-satisfydepends-dummy depends on phyml; however:
Package phyml is not installed.
pbuilder-satisfydepends-dummy depends on prank; however:
Package prank is not installed.
pbuilder-satisfydepends-dummy depends on probcons; however:
Package probcons is not installed.
pbuilder-satisfydepends-dummy depends on python3-networkx; however:
Package python3-networkx is not installed.
pbuilder-satisfydepends-dummy depends on python3-numpydoc; however:
Package python3-numpydoc is not installed.
pbuilder-satisfydepends-dummy depends on python3-mysqldb; however:
Package python3-mysqldb is not installed.
pbuilder-satisfydepends-dummy depends on python3-matplotlib; however:
Package python3-matplotlib is not installed.
pbuilder-satisfydepends-dummy depends on python3-mmtf; however:
Package python3-mmtf is not installed.
pbuilder-satisfydepends-dummy depends on python3-pil; however:
Package python3-pil is not installed.
pbuilder-satisfydepends-dummy depends on python3-rdflib; however:
Package python3-rdflib is not installed.
pbuilder-satisfydepends-dummy depends on python3-psycopg2; however:
Package python3-psycopg2 is not installed.
pbuilder-satisfydepends-dummy depends on python3-pygments; however:
Package python3-pygments is not installed.
pbuilder-satisfydepends-dummy depends on python3-igraph; however:
Package python3-igraph is not installed.
pbuilder-satisfydepends-dummy depends on python3-scipy; however:
Package python3-scipy is not installed.
pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
Package python3-setuptools is not installed.
pbuilder-satisfydepends-dummy depends on python3-sphinx; however:
Package python3-sphinx is not installed.
pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however:
Package python3-sphinx-rtd-theme is not installed.
pbuilder-satisfydepends-dummy depends on raxml; however:
Package raxml is not installed.
pbuilder-satisfydepends-dummy depends on samtools; however:
Package samtools is not installed.
pbuilder-satisfydepends-dummy depends on t-coffee; however:
Package t-coffee is not installed.
pbuilder-satisfydepends-dummy depends on wise; however:
Package wise is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
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libptexenc1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} librav1e0.7{a} libraw23t64{a} librdmacm1t64{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsuitesparseconfig7{a} libsvtav1enc2{a} libsynctex2{a} libtasn1-6{a} libtcl8.6{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libunistring5{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxi6{a} libxml2{a} libxmu6{a} libxnvctrl0{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyuv0{a} libz3-4{a} libzzip-0-13t64{a} m4{a} mafft{a} man-db{a} mariadb-common{a} media-types{a} mpi-default-bin{a} muscle3{a} mysql-common{a} ncbi-blast+{a} ncbi-data{a} netbase{a} netpbm{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} phylip{a} phyml{a} po-debconf{a} poppler-data{a} prank{a} preview-latex-style{a} probcons{a} procps{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-cairo{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-docutils{a} python3-fonttools{a} python3-freetype{a} python3-fs{a} python3-idna{a} python3-igraph{a} python3-imagesize{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-mmtf{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-mysqldb{a} python3-networkx{a} python3-numpy{a} python3-numpy-dev{a} python3-numpydoc{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-psycopg2{a} python3-pygments{a} python3-pyparsing{a} python3-pytz{a} python3-rdflib{a} python3-reportlab{a} python3-requests{a} python3-rlpycairo{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tabulate{a} python3-texttable{a} python3-tk{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-zipp{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} raxml{a} readline-common{a} samtools{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} t-coffee{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} wise{a} wise-data{a} x11-common{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} zlib1g-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
amap-align curl dbus default-jre dialign-tx dvisvgm fonts-dejavu-extra fonts-droid-fallback fsa isympy-common javascript-common kalign krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libfl-dev libglib2.0-data libgpg-error-l10n libgpm2 libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libldap-common libltdl-dev libmagickcore-7.q16-10-extra libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libsoap-lite-perl libspreadsheet-parseexcel-perl libwww-perl libx11-protocol-perl libxml-simple-perl linux-sysctl-defaults lmodern lynx muscle mustang poa primer3 proda psmisc publicsuffix python3-bs4 python3-cssselect python3-gdal python3-html5lib python3-html5rdf python3-olefile python3-orjson python3-pooch python3-pydot python3-pygraphviz python3-yaml ruby shared-mime-info tex-gyre texlive-plain-generic tipa tk tm-align wget x11-utils x11-xserver-utils xauth xdg-user-dirs
0 packages upgraded, 381 newly installed, 0 to remove and 0 not upgraded.
Need to get 454 MB of archives. After unpacking 2036 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB]
Get: 2 http://deb.debian.org/debian unstable/main amd64 flex amd64 2.6.4-8.2+b4 [423 kB]
Get: 3 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB]
Get: 4 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2+b1 [781 kB]
Get: 5 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get: 6 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB]
Get: 7 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.47-1 [282 kB]
Get: 8 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB]
Get: 9 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 10 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 11 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB]
Get: 12 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+24 [217 kB]
Get: 13 http://deb.debian.org/debian unstable/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB]
Get: 14 http://deb.debian.org/debian unstable/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB]
Get: 15 http://deb.debian.org/debian unstable/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB]
Get: 16 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2 [317 kB]
Get: 17 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2 [391 kB]
Get: 18 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB]
Get: 19 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.1-1 [559 kB]
Get: 20 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.19.5-1+b1 [11.5 kB]
Get: 21 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.0.15-1+b3 [189 kB]
Get: 22 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.19.5-1+b1 [15.5 kB]
Get: 23 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.19.5-1+b1 [514 kB]
Get: 24 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB]
Get: 25 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3.1 [168 kB]
Get: 26 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB]
Get: 27 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get: 28 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.83.5-1 [1513 kB]
Get: 29 http://deb.debian.org/debian unstable/main amd64 liblqr-1-0 amd64 0.4.2-2.1+b2 [29.5 kB]
Get: 30 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.5.4-3 [415 kB]
Get: 31 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.3-1 [204 kB]
Get: 32 http://deb.debian.org/debian unstable/main amd64 libraw23t64 amd64 0.21.3-1+b1 [390 kB]
Get: 33 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB]
Get: 34 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB]
Get: 35 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB]
Get: 36 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB]
Get: 37 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB]
Get: 38 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB]
Get: 39 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB]
Get: 40 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB]
Get: 41 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB]
Get: 42 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 43 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB]
Get: 44 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB]
Get: 45 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB]
Get: 46 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b2 [699 kB]
Get: 47 http://deb.debian.org/debian unstable/main amd64 imagemagick-7-common all 8:7.1.1.43+dfsg1-1 [67.4 kB]
Get: 48 http://deb.debian.org/debian unstable/main amd64 libmagickcore-7.q16-10 amd64 8:7.1.1.43+dfsg1-1 [1843 kB]
Get: 49 http://deb.debian.org/debian unstable/main amd64 libmagickwand-7.q16-10 amd64 8:7.1.1.43+dfsg1-1 [340 kB]
Get: 50 http://deb.debian.org/debian unstable/main amd64 poppler-data all 0.4.12-1 [1601 kB]
Get: 51 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB]
Get: 52 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB]
Get: 53 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.2-2 [27.1 kB]
Get: 54 http://deb.debian.org/debian unstable/main amd64 media-types all 12.0.0 [28.9 kB]
Get: 55 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB]
Get: 56 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025a-2 [259 kB]
Get: 57 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB]
Get: 58 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get: 59 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB]
Get: 60 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.2-1 [745 kB]
Get: 61 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.1 kB]
Get: 62 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.2-2 [28.1 kB]
Get: 63 http://deb.debian.org/debian unstable/main amd64 python3-numpy-dev amd64 1:2.2.3+ds-4 [139 kB]
Get: 64 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-2 [160 kB]
Get: 65 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-17 [836 kB]
Get: 66 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-2 [2452 kB]
Get: 67 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:2.2.3+ds-4 [5085 kB]
Get: 68 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB]
Get: 69 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB]
Get: 70 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-7 [878 kB]
Get: 71 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get: 72 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.4.1-1 [1427 kB]
Get: 73 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20241223 [164 kB]
Get: 74 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB]
Get: 75 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB]
Get: 76 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB]
Get: 77 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB]
Get: 78 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get: 79 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB]
Get: 80 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.4-5 [92.4 kB]
Get: 81 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get: 82 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get: 83 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB]
Get: 84 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB]
Get: 85 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB]
Get: 86 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-4 [32.8 kB]
Get: 87 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB]
Get: 88 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-4 [80.9 kB]
Get: 89 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B]
Get: 90 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-4 [326 kB]
Get: 91 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-4 [138 kB]
Get: 92 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p2-1 [970 kB]
Get: 93 http://deb.debian.org/debian unstable/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B]
Get: 94 http://deb.debian.org/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B]
Get: 95 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0050 [42.7 kB]
Get: 96 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB]
Get: 97 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 98 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-3 [862 kB]
Get: 99 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB]
Get: 100 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1042 kB]
Get: 101 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b4 [27.8 kB]
Get: 102 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b4 [54.5 kB]
Get: 103 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b3 [17.0 kB]
Get: 104 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.16-1 [793 kB]
Get: 105 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB]
Get: 106 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B]
Get: 107 http://deb.debian.org/debian unstable/main amd64 bwa amd64 0.7.18-1 [212 kB]
Get: 108 http://deb.debian.org/debian unstable/main amd64 libargtable2-0 amd64 13-3 [18.3 kB]
Get: 109 http://deb.debian.org/debian unstable/main amd64 clustalo amd64 1.2.4-8 [267 kB]
Get: 110 http://deb.debian.org/debian unstable/main amd64 clustalw amd64 2.1+lgpl-7 [282 kB]
Get: 111 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 112 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-3 [539 kB]
Get: 113 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 114 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 115 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 116 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 117 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get: 118 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 119 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB]
Get: 120 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB]
Get: 121 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 122 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 123 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.1 [920 kB]
Get: 124 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 125 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB]
Get: 126 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 127 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.2-1 [37.3 kB]
Get: 128 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 129 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B]
Get: 130 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 131 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.8.0-1 [222 kB]
Get: 132 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 133 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 134 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.8.0-1 [724 kB]
Get: 135 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20250108 [113 kB]
Get: 136 http://deb.debian.org/debian unstable/main amd64 dialign amd64 2.2.1-13 [138 kB]
Get: 137 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB]
Get: 138 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB]
Get: 139 http://deb.debian.org/debian unstable/main amd64 libcifpp-data all 7.0.9-1 [484 kB]
Get: 140 http://deb.debian.org/debian unstable/main amd64 libcifpp7 amd64 7.0.9-1 [1032 kB]
Get: 141 http://deb.debian.org/debian unstable/main amd64 dssp amd64 4.4.10-1 [697 kB]
Get: 142 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.12.0-1 [1870 kB]
Get: 143 http://deb.debian.org/debian unstable/main amd64 libabsl20230802 amd64 20230802.1-4.2 [471 kB]
Get: 144 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-3 [350 kB]
Get: 145 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-9+b1 [946 kB]
Get: 146 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2489 kB]
Get: 147 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1904.20250204-1 [174 kB]
Get: 148 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.2.0-1 [133 kB]
Get: 149 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB]
Get: 150 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB]
Get: 151 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB]
Get: 152 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.2.0-1 [479 kB]
Get: 153 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.2-1 [13.9 kB]
Get: 154 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b3 [56.2 kB]
Get: 155 http://deb.debian.org/debian unstable/main amd64 libgd3 amd64 2.3.3-12+b1 [126 kB]
Get: 156 http://deb.debian.org/debian unstable/main amd64 libhpdf-2.3.0 amd64 2.3.0+dfsg-1+b3 [343 kB]
Get: 157 http://deb.debian.org/debian unstable/main amd64 mysql-common all 5.8+1.1.1 [6784 B]
Get: 158 http://deb.debian.org/debian unstable/main amd64 mariadb-common all 1:11.4.5-1 [28.4 kB]
Get: 159 http://deb.debian.org/debian unstable/main amd64 libmariadb3 amd64 1:11.4.5-1 [185 kB]
Get: 160 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB]
Get: 161 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB]
Get: 162 http://deb.debian.org/debian unstable/main amd64 libldap2 amd64 2.6.9+dfsg-1 [192 kB]
Get: 163 http://deb.debian.org/debian unstable/main amd64 libpq5 amd64 17.4-1 [226 kB]
Get: 164 http://deb.debian.org/debian unstable/main amd64 emboss-lib amd64 6.6.0+dfsg-15 [2874 kB]
Get: 165 http://deb.debian.org/debian unstable/main amd64 emboss-data all 6.6.0+dfsg-15 [61.1 MB]
Get: 166 http://deb.debian.org/debian unstable/main amd64 emboss amd64 6.6.0+dfsg-15 [1072 kB]
Get: 167 http://deb.debian.org/debian unstable/main amd64 fasttree amd64 2.1.11-2 [181 kB]
Get: 168 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB]
Get: 169 http://deb.debian.org/debian unstable/main amd64 fonts-lmodern all 2.005-1 [4540 kB]
Get: 170 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.3-1 [190 kB]
Get: 171 http://deb.debian.org/debian unstable/main amd64 libgs-common all 10.04.0~dfsg-2 [148 kB]
Get: 172 http://deb.debian.org/debian unstable/main amd64 libgs10-common all 10.04.0~dfsg-2 [475 kB]
Get: 173 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-16 [112 kB]
Get: 174 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-16 [44.2 kB]
Get: 175 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.16.2-1 [177 kB]
Get: 176 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-16 [48.4 kB]
Get: 177 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB]
Get: 178 http://deb.debian.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB]
Get: 179 http://deb.debian.org/debian unstable/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB]
Get: 180 http://deb.debian.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB]
Get: 181 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.10-2+b1 [251 kB]
Get: 182 http://deb.debian.org/debian unstable/main amd64 libidn12 amd64 1.42-3 [81.0 kB]
Get: 183 http://deb.debian.org/debian unstable/main amd64 libijs-0.35 amd64 0.35-15.2 [14.8 kB]
Get: 184 http://deb.debian.org/debian unstable/main amd64 libjbig2dec0 amd64 0.20-1+b3 [65.1 kB]
Get: 185 http://deb.debian.org/debian unstable/main amd64 libpaper2 amd64 2.2.5-0.3+b1 [16.6 kB]
Get: 186 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB]
Get: 187 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB]
Get: 188 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b2 [188 kB]
Get: 189 http://deb.debian.org/debian unstable/main amd64 libgs10 amd64 10.04.0~dfsg-2+b1 [2561 kB]
Get: 190 http://deb.debian.org/debian unstable/main amd64 ghostscript amd64 10.04.0~dfsg-2+b1 [50.9 kB]
Get: 191 http://deb.debian.org/debian unstable/main amd64 libnetpbm11t64 amd64 2:11.09.03-1 [184 kB]
Get: 192 http://deb.debian.org/debian unstable/main amd64 netpbm amd64 2:11.09.03-1 [2081 kB]
Get: 193 http://deb.debian.org/debian unstable/main amd64 tex-common all 6.19 [29.4 kB]
Get: 194 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 2.2.5-0.3+b1 [16.4 kB]
Get: 195 http://deb.debian.org/debian unstable/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-5+b1 [157 kB]
Get: 196 http://deb.debian.org/debian unstable/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-5+b1 [49.4 kB]
Get: 197 http://deb.debian.org/debian unstable/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-5+b1 [63.0 kB]
Get: 198 http://deb.debian.org/debian unstable/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-5+b1 [115 kB]
Get: 199 http://deb.debian.org/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB]
Get: 200 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB]
Get: 201 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB]
Get: 202 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB]
Get: 203 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB]
Get: 204 http://deb.debian.org/debian unstable/main amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB]
Get: 205 http://deb.debian.org/debian unstable/main amd64 libpotrace0 amd64 1.16-2+b2 [25.6 kB]
Get: 206 http://deb.debian.org/debian unstable/main amd64 libteckit0 amd64 2.5.12+ds1-1+b1 [341 kB]
Get: 207 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b4 [59.0 kB]
Get: 208 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB]
Get: 209 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB]
Get: 210 http://deb.debian.org/debian unstable/main amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [59.0 kB]
Get: 211 http://deb.debian.org/debian unstable/main amd64 texlive-binaries amd64 2024.20240313.70630+ds-5+b1 [8504 kB]
Get: 212 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB]
Get: 213 http://deb.debian.org/debian unstable/main amd64 texlive-base all 2024.20250114-1 [22.8 MB]
Get: 214 http://deb.debian.org/debian unstable/main amd64 hicolor-icon-theme all 0.18-2 [11.8 kB]
Get: 215 http://deb.debian.org/debian unstable/main amd64 imagemagick-7.q16 amd64 8:7.1.1.43+dfsg1-1 [726 kB]
Get: 216 http://deb.debian.org/debian unstable/main amd64 imagemagick amd64 8:7.1.1.43+dfsg1-1 [20.0 kB]
Get: 217 http://deb.debian.org/debian unstable/main amd64 hevea amd64 2.36-2+b3 [2073 kB]
Get: 218 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB]
Get: 219 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB]
Get: 220 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 56.0-2 [62.2 kB]
Get: 221 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 56.0-2 [357 kB]
Get: 222 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB]
Get: 223 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-21 [23.6 MB]
Get: 224 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB]
Get: 225 http://deb.debian.org/debian unstable/main amd64 libsuitesparseconfig7 amd64 1:7.9.0+dfsg-1 [32.0 kB]
Get: 226 http://deb.debian.org/debian unstable/main amd64 libamd3 amd64 1:7.9.0+dfsg-1 [48.9 kB]
Get: 227 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.124-1 [8180 B]
Get: 228 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.124-1 [38.9 kB]
Get: 229 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.124-1 [22.4 kB]
Get: 230 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB]
Get: 231 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.2.4+ds-1 [61.1 kB]
Get: 232 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-3 [535 kB]
Get: 233 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5+b1 [8882 kB]
Get: 234 http://deb.debian.org/debian unstable/main amd64 libapache-pom-java all 33-2 [5852 B]
Get: 235 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-4 [104 kB]
Get: 236 http://deb.debian.org/debian unstable/main amd64 libcolamd3 amd64 1:7.9.0+dfsg-1 [40.8 kB]
Get: 237 http://deb.debian.org/debian unstable/main amd64 libcommons-parent-java all 56-1 [10.8 kB]
Get: 238 http://deb.debian.org/debian unstable/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB]
Get: 239 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB]
Get: 240 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB]
Get: 241 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.11.0-1 [131 kB]
Get: 242 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.11.0-1 [29.3 kB]
Get: 243 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB]
Get: 244 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB]
Get: 245 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB]
Get: 246 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.12.1-3 [365 kB]
Get: 247 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB]
Get: 248 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB]
Get: 249 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB]
Get: 250 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB]
Get: 251 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB]
Get: 252 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 56.0-2 [70.2 kB]
Get: 253 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB]
Get: 254 http://deb.debian.org/debian unstable/main amd64 libfontbox-java all 1:1.8.16-5 [211 kB]
Get: 255 http://deb.debian.org/debian unstable/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB]
Get: 256 http://deb.debian.org/debian unstable/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB]
Get: 257 http://deb.debian.org/debian unstable/main amd64 libglpk40 amd64 5.0-1+b2 [401 kB]
Get: 258 http://deb.debian.org/debian unstable/main amd64 libhtscodecs2 amd64 1.6.1-2 [95.8 kB]
Get: 259 http://deb.debian.org/debian unstable/main amd64 libhts3t64 amd64 1.21+ds-1 [463 kB]
Get: 260 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB]
Get: 261 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b2 [14.2 kB]
Get: 262 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB]
Get: 263 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.12.0-1 [164 kB]
Get: 264 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.12.0-1 [18.1 kB]
Get: 265 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 56.0-2 [29.8 kB]
Get: 266 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 56.0-2 [44.3 kB]
Get: 267 http://deb.debian.org/debian unstable/main amd64 libplfit0 amd64 0.9.6+ds-2+b1 [32.1 kB]
Get: 268 http://deb.debian.org/debian unstable/main amd64 libigraph3t64 amd64 0.10.15+ds-2 [914 kB]
Get: 269 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 270 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 271 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 272 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 8.1.3-5 [30.5 kB]
Get: 273 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB]
Get: 274 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB]
Get: 275 http://deb.debian.org/debian unstable/main amd64 liblmdb0 amd64 0.9.31-1+b2 [45.2 kB]
Get: 276 http://deb.debian.org/debian unstable/main amd64 libmbedcrypto16 amd64 3.6.2-3 [355 kB]
Get: 277 http://deb.debian.org/debian unstable/main amd64 libmbedx509-7 amd64 3.6.2-3 [147 kB]
Get: 278 http://deb.debian.org/debian unstable/main amd64 libmbedtls21 amd64 3.6.2-3 [234 kB]
Get: 279 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.16-1 [19.7 kB]
Get: 280 http://deb.debian.org/debian unstable/main amd64 libncurses6 amd64 6.5+20250216-1 [105 kB]
Get: 281 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.6-4 [652 kB]
Get: 282 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.18.1+ds-1 [1197 kB]
Get: 283 http://deb.debian.org/debian unstable/main amd64 libopenmpi40 amd64 5.0.7-1 [2365 kB]
Get: 284 http://deb.debian.org/debian unstable/main amd64 libpdfbox-java all 1:1.8.16-5 [5527 kB]
Get: 285 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.2-1 [2151 kB]
Get: 286 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB]
Get: 287 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.2-1 [5005 kB]
Get: 288 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.13.2-2 [10.3 kB]
Get: 289 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.13.2-2 [1068 B]
Get: 290 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB]
Get: 291 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB]
Get: 292 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB]
Get: 293 http://deb.debian.org/debian unstable/main amd64 mafft amd64 7.505-1 [1078 kB]
Get: 294 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.7-1 [97.2 kB]
Get: 295 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.7-1 [189 kB]
Get: 296 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.18 [2576 B]
Get: 297 http://deb.debian.org/debian unstable/main amd64 muscle3 amd64 3.8.1551-3 [247 kB]
Get: 298 http://deb.debian.org/debian unstable/main amd64 ncbi-data all 6.1.20170106+dfsg2-5 [3537 kB]
Get: 299 http://deb.debian.org/debian unstable/main amd64 ncbi-blast+ amd64 2.16.0+ds-6+b1 [15.2 MB]
Get: 300 http://deb.debian.org/debian unstable/main amd64 phylip amd64 1:3.697+dfsg-4 [957 kB]
Get: 301 http://deb.debian.org/debian unstable/main amd64 phyml amd64 3:3.3.20220408-4+b1 [1106 kB]
Get: 302 http://deb.debian.org/debian unstable/main amd64 prank amd64 0.0.170427+dfsg-3 [395 kB]
Get: 303 http://deb.debian.org/debian unstable/main amd64 preview-latex-style all 13.2-1 [350 kB]
Get: 304 http://deb.debian.org/debian unstable/main amd64 probcons amd64 1.12-14 [119 kB]
Get: 305 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.17.0-1 [6050 kB]
Get: 306 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-7 [2735 kB]
Get: 307 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB]
Get: 308 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.13.2-2 [1044 B]
Get: 309 http://deb.debian.org/debian unstable/main amd64 python3.13-dev amd64 3.13.2-1 [507 kB]
Get: 310 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.13.2-2 [26.1 kB]
Get: 311 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.13.2-2 [1064 B]
Get: 312 http://deb.debian.org/debian unstable/main amd64 python3-attr all 25.1.0-1 [68.7 kB]
Get: 313 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.17.0-1 [117 kB]
Get: 314 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b7 [320 kB]
Get: 315 http://deb.debian.org/debian unstable/main amd64 python3-cairo amd64 1.26.1-2+b2 [114 kB]
Get: 316 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2025.1.31+ds-1 [9652 B]
Get: 317 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB]
Get: 318 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.1-1+b1 [125 kB]
Get: 319 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.1-1+b1 [216 kB]
Get: 320 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B]
Get: 321 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB]
Get: 322 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB]
Get: 323 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB]
Get: 324 http://deb.debian.org/debian unstable/main amd64 python3-roman all 5.0-1 [10.6 kB]
Get: 325 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB]
Get: 326 http://deb.debian.org/debian unstable/main amd64 python3-pytz all 2025.1-3 [150 kB]
Get: 327 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2025.1-3 [4004 B]
Get: 328 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB]
Get: 329 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-6 [95.1 kB]
Get: 330 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.1-1+b1 [1288 kB]
Get: 331 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.4.0+dfsg-1+b1 [25.5 kB]
Get: 332 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.14.1-4+b1 [17.1 MB]
Get: 333 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB]
Get: 334 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-5 [4148 kB]
Get: 335 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB]
Get: 336 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB]
Get: 337 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.55.3-2+b1 [1448 kB]
Get: 338 http://deb.debian.org/debian unstable/main amd64 python3-freetype all 2.5.1-1 [89.3 kB]
Get: 339 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.10-1 [42.0 kB]
Get: 340 http://deb.debian.org/debian unstable/main amd64 python3-texttable all 1.7.0-1 [12.0 kB]
Get: 341 http://deb.debian.org/debian unstable/main amd64 python3-igraph amd64 0.11.8+ds-1 [327 kB]
Get: 342 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B]
Get: 343 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b3 [14.0 kB]
Get: 344 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.5-2 [107 kB]
Get: 345 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-3+b1 [62.0 kB]
Get: 346 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 11.1.0-5+b1 [513 kB]
Get: 347 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.2-1 [103 kB]
Get: 348 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.13.2-1 [9516 B]
Get: 349 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 11.1.0-5+b1 [81.6 kB]
Get: 350 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB]
Get: 351 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB]
Get: 352 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-7+b1 [23.0 MB]
Get: 353 http://deb.debian.org/debian unstable/main amd64 python3-msgpack amd64 1.0.3-3+b4 [84.5 kB]
Get: 354 http://deb.debian.org/debian unstable/main amd64 python3-mmtf all 1.1.3-1 [17.0 kB]
Get: 355 http://deb.debian.org/debian unstable/main amd64 python3-mysqldb amd64 1.4.6-2+b5 [50.6 kB]
Get: 356 http://deb.debian.org/debian unstable/main amd64 python3-networkx all 3.2.1-5 [13.0 MB]
Get: 357 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 8.1.3-5 [617 kB]
Get: 358 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-2 [836 kB]
Get: 359 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.3.0-1 [114 kB]
Get: 360 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-4 [72.1 kB]
Get: 361 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB]
Get: 362 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 8.1.3-5 [468 kB]
Get: 363 http://deb.debian.org/debian unstable/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB]
Get: 364 http://deb.debian.org/debian unstable/main amd64 python3-numpydoc all 1.8.0-1 [51.4 kB]
Get: 365 http://deb.debian.org/debian unstable/main amd64 python3-psycopg2 amd64 2.9.10-1+b1 [129 kB]
Get: 366 http://deb.debian.org/debian unstable/main amd64 python3-rdflib all 7.1.1-2 [472 kB]
Get: 367 http://deb.debian.org/debian unstable/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B]
Get: 368 http://deb.debian.org/debian unstable/main amd64 python3-reportlab all 4.3.1-1 [1158 kB]
Get: 369 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1023 kB]
Get: 370 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-5 [7348 B]
Get: 371 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.0.2+dfsg-2 [29.7 kB]
Get: 372 http://deb.debian.org/debian unstable/main amd64 raxml amd64 8.2.13+dfsg-2 [1508 kB]
Get: 373 http://deb.debian.org/debian unstable/main amd64 samtools amd64 1.21-1 [667 kB]
Get: 374 http://deb.debian.org/debian unstable/main amd64 t-coffee amd64 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 [1032 kB]
Get: 375 http://deb.debian.org/debian unstable/main amd64 texlive-fonts-recommended all 2024.20250114-1 [4991 kB]
Get: 376 http://deb.debian.org/debian unstable/main amd64 texlive-latex-base all 2024.20250114-1 [1282 kB]
Get: 377 http://deb.debian.org/debian unstable/main amd64 texlive-latex-recommended all 2024.20250114-1 [8760 kB]
Get: 378 http://deb.debian.org/debian unstable/main amd64 texlive-pictures all 2024.20250114-1 [17.1 MB]
Get: 379 http://deb.debian.org/debian unstable/main amd64 texlive-latex-extra all 2024.20250114-1 [24.7 MB]
Get: 380 http://deb.debian.org/debian unstable/main amd64 wise-data all 2.4.1-25 [76.1 kB]
Get: 381 http://deb.debian.org/debian unstable/main amd64 wise amd64 2.4.1-25 [1037 kB]
Fetched 454 MB in 8s (55.2 MB/s)
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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
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Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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Setting up hevea (2.36-2+b3) ...
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Processing triggers for sgml-base (1.31) ...
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Setting up python3-sphinxcontrib.jquery (4.1-5) ...
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Processing triggers for ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for tex-common (6.19) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
Reading package lists...
Building dependency tree...
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Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/python-biopython-1.85+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-biopython_1.85+dfsg-2_source.changes
dpkg-buildpackage: info: source package python-biopython
dpkg-buildpackage: info: source version 1.85+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
debian/rules clean
dh clean --with python3 --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_auto_clean
pybuild --clean -i python{version} -p 3.13
I: pybuild base:311: python3.13 setup.py clean
running clean
removing '/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
cd Doc && make clean
make[2]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc'
rm -f api/Bio*.rst
rm -rf _build/doctrees
rm -rf _build/html
rm -rf _build/latex
make[2]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc'
rm -f Doc/install/Installation.pdf
rm -f Doc/install/Installation.txt
rm -f Doc/install/Installation.html
rm -f Doc/Tutorial.pdf Doc/biopdb_faq.pdf
rm -f Doc/Tutorial/*.aux
find Doc -name "*.pygtex" -o -name "*.pygstyle" -delete
rm -rf biopython.egg-info
rm -rf .pybuild
if [ -d Tests_avoid ] ; then \
mv Tests_avoid/* Tests ; \
rmdir Tests_avoid ; \
fi
rm -rf debian/tmp_tests
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-biopython.substvars debian/python-biopython-doc.substvars debian/python3-biopython-sql.substvars debian/files
rm -fr -- debian/python3-biopython/ debian/tmp/ debian/python-biopython-doc/ debian/python3-biopython-sql/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \)
debian/rules binary
dh binary --with python3 --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
pybuild --configure -i python{version} -p 3.13
I: pybuild base:311: python3.13 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_auto_build
pybuild --build -i python{version} -p 3.13
I: pybuild base:311: /usr/bin/python3 setup.py build
running build
running build_py
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/SeqFeature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/Seq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/File.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/MaxEntropy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/kNN.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/NaiveBayes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/pairwise2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/bgzf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/SeqRecord.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/LogisticRegression.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy
copying Bio/Affy/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy
copying Bio/Affy/CelFile.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/mauve.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/a2m.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/phylip.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/stockholm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/emboss.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/bigmaf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/maf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/bigpsl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/msf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/AlignInfo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/clustal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/fasta.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/hhr.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/bigbed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/bed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/analysis.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/sam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/tabular.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_ClustalOmega.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Muscle.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_MSAProbs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Dialign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Probcons.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Clustalw.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Prank.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Mafft.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_TCoffee.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices
copying Bio/Align/substitution_matrices/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/StockholmIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/ClustalIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/Interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/MafIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/EmbossIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/NexusIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/MauveIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/MsfIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/PhylipIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Alphabet
copying Bio/Alphabet/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Alphabet
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application
copying Bio/Application/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/_writers.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/Applications.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/NCBIXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/NCBIWWW.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/CAPS
copying Bio/CAPS/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/CAPS
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
copying Bio/Cluster/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign
copying Bio/codonalign/codonalignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign
copying Bio/codonalign/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign
copying Bio/codonalign/codonseq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Compass
copying Bio/Compass/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Compass
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
copying Bio/Data/CodonTable.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
copying Bio/Data/IUPACData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
copying Bio/Data/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
copying Bio/Data/PDBData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
copying Bio/Emboss/Primer3.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
copying Bio/Emboss/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
copying Bio/Emboss/PrimerSearch.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
copying Bio/Emboss/Applications.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez
copying Bio/Entrez/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez
copying Bio/Entrez/Parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/cellosaurus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/Prosite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/Enzyme.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/Prodoc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/ScanProsite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
copying Bio/GenBank/Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
copying Bio/GenBank/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
copying Bio/GenBank/utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
copying Bio/GenBank/Scanner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo
copying Bio/Geo/Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo
copying Bio/Geo/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics
copying Bio/Graphics/Distribution.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics
copying Bio/Graphics/ColorSpiral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics
copying Bio/Graphics/KGML_vis.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics
copying Bio/Graphics/BasicChromosome.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics
copying Bio/Graphics/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics
copying Bio/Graphics/DisplayRepresentation.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics
copying Bio/Graphics/Comparative.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Diagram.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Graph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Feature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Track.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_Colors.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram
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creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
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copying Bio/SearchIO/HmmerIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO
copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO
copying Bio/SearchIO/InterproscanIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/SnapGeneIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/QualityIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/TwoBitIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/PhdIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/SffIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/InsdcIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/PirIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/Interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/GckIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/NibIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/AbiIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/GfaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/UniprotIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/SeqXmlIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/PdbIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/IgIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/XdnaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/SwissIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/AceIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/TabIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/CheckSum.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/IsoelectricPoint.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/lcc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/ProtParam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/MeltingTemp.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/ProtParamData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing
copying Bio/Sequencing/Phd.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing
copying Bio/Sequencing/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing
copying Bio/Sequencing/Ace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/_samtools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/_Novoalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/_bwa.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SVDSuperimposer
copying Bio/SVDSuperimposer/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SVDSuperimposer
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt
copying Bio/SwissProt/KeyWList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt
copying Bio/SwissProt/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/TogoWS
copying Bio/TogoWS/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/TogoWS
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/NeXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/PhyloXMLIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/CDAOIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/TreeConstruction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/Newick.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/Consensus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/NexusIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/NeXMLIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/CDAO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/NewickIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/PhyloXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/_io.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/_cdao_owl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/BaseTree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Raxml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Phyml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
copying Bio/Phylo/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Fasttree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/chi2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_paml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniGene
copying Bio/UniGene/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniGene
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt
copying Bio/UniProt/GOA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt
copying Bio/UniProt/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/BioSeqDatabase.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/BioSeq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/Loader.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/DBUtils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
running egg_info
creating biopython.egg-info
writing biopython.egg-info/PKG-INFO
writing dependency_links to biopython.egg-info/dependency_links.txt
writing requirements to biopython.egg-info/requires.txt
writing top-level names to biopython.egg-info/top_level.txt
writing manifest file 'biopython.egg-info/SOURCES.txt'
reading manifest file 'biopython.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files found matching 'Doc/_build'
warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '*.py{}' found anywhere in distribution
warning: no previously-included files matching '*.py-e' found anywhere in distribution
adding license file 'LICENSE'
adding license file 'LICENSE.rst'
writing manifest file 'biopython.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are
already explicitly excluding 'Bio.Align.substitution_matrices.data' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Entrez.DTDs' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Entrez.DTDs' to be distributed and are
already explicitly excluding 'Bio.Entrez.DTDs' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Entrez.XSDs' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Entrez.XSDs' to be distributed and are
already explicitly excluding 'Bio.Entrez.XSDs' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
copying Bio/cpairwise2module.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/Align/_aligncore.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/_codonaligner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/_pairwisealigner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BENNER22 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BENNER6 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BENNER74 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLASTN -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLASTP -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM45 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM50 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM62 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM80 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM90 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/DAYHOFF -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/FENG -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/GENETIC -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/GONNET1992 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/HOXD70 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/JOHNSON -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/JONES -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/LEVIN -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/MCLACHLAN -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/MDM78 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/MEGABLAST -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/NUC.4.4 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/PAM250 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/PAM30 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/PAM70 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/RAO -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/RISLER -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/SCHNEIDER -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/STR -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/TRANS -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Cluster/cluster.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
copying Bio/Cluster/cluster.h -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
copying Bio/Cluster/clustermodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/EMBL_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/GenBank_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/HomoloGene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-common1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-display1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-format1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-funding1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-link1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-list1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-math1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-notat1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-para1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-phrase1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-references1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-related-object1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-section1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
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copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
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copying Bio/Entrez/DTDs/NCBI_Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
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copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
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copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
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copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
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copying Bio/Entrez/DTDs/isogrk3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk4.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isolat1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isolat2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomfrk.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomopf.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomscr.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isonum.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isopub.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isotech.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/journalmeta.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/link.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/list.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/math.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml3-qname1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathmlsetup.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mmlalias.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mmlextra.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/modules.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/notat.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/para.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/phrase.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pmc-1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_020114.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_180101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_180601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_190101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/references.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/section.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/taxon.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/xhtml-table-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/xmlspecchars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs
copying Bio/Entrez/XSDs/IPGReportSet.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs
copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs
copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs
copying Bio/motifs/_pwm.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
copying Bio/Nexus/cnexus.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus
copying Bio/PDB/bcifhelpermodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB
copying Bio/PDB/ccealignmodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB
copying Bio/PDB/kdtrees.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB
copying Bio/SeqIO/_twoBitIO.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying BioSQL/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
running build_ext
building 'Bio.Align._codonaligner' extension
creating build/temp.linux-x86_64-cpython-313/Bio/Align
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Align/_codonaligner.c -o build/temp.linux-x86_64-cpython-313/Bio/Align/_codonaligner.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Align/_codonaligner.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so
building 'Bio.Align._pairwisealigner' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-x86_64-cpython-313/Bio/Align/_pairwisealigner.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Align/_pairwisealigner.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so
building 'Bio.Align._aligncore' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Align/_aligncore.c -o build/temp.linux-x86_64-cpython-313/Bio/Align/_aligncore.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Align/_aligncore.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so
building 'Bio.cpairwise2' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/cpairwise2module.c -o build/temp.linux-x86_64-cpython-313/Bio/cpairwise2module.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/cpairwise2module.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so
building 'Bio.Nexus.cnexus' extension
creating build/temp.linux-x86_64-cpython-313/Bio/Nexus
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Nexus/cnexus.c -o build/temp.linux-x86_64-cpython-313/Bio/Nexus/cnexus.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Nexus/cnexus.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so
building 'Bio.motifs._pwm' extension
creating build/temp.linux-x86_64-cpython-313/Bio/motifs
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/motifs/_pwm.c -o build/temp.linux-x86_64-cpython-313/Bio/motifs/_pwm.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/motifs/_pwm.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so
building 'Bio.Cluster._cluster' extension
creating build/temp.linux-x86_64-cpython-313/Bio/Cluster
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Cluster/cluster.c -o build/temp.linux-x86_64-cpython-313/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Cluster/clustermodule.c -o build/temp.linux-x86_64-cpython-313/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Cluster/cluster.o build/temp.linux-x86_64-cpython-313/Bio/Cluster/clustermodule.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so
building 'Bio.PDB.ccealign' extension
creating build/temp.linux-x86_64-cpython-313/Bio/PDB
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-x86_64-cpython-313/Bio/PDB/ccealignmodule.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/PDB/ccealignmodule.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so
building 'Bio.PDB.kdtrees' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/PDB/kdtrees.c -o build/temp.linux-x86_64-cpython-313/Bio/PDB/kdtrees.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/PDB/kdtrees.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so
building 'Bio.PDB._bcif_helper' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-x86_64-cpython-313/Bio/PDB/bcifhelpermodule.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/PDB/bcifhelpermodule.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so
building 'Bio.SeqIO._twoBitIO' extension
creating build/temp.linux-x86_64-cpython-313/Bio/SeqIO
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-x86_64-cpython-313/Bio/SeqIO/_twoBitIO.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/SeqIO/_twoBitIO.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so
PYTHONPATH=/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build \
/usr/bin/make -C Doc html
make[2]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc'
Running Sphinx v8.1.3
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application/__init__.py:39: BiopythonDeprecationWarning: The Bio.Application modules and modules relying on it have been deprecated.
Due to the on going maintenance burden of keeping command line application
wrappers up to date, we have decided to deprecate and eventually remove these
modules.
We instead now recommend building your command line and invoking it directly
with the subprocess module.
warnings.warn(
loading translations [en]... done
making output directory... done
Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`.
[autosummary] generating autosummary for: Tutorial/chapter_align.rst, Tutorial/chapter_appendix.rst, Tutorial/chapter_bibliography.rst, Tutorial/chapter_blast.rst, Tutorial/chapter_cluster.rst, Tutorial/chapter_contributing.rst, Tutorial/chapter_cookbook.rst, Tutorial/chapter_entrez.rst, Tutorial/chapter_graphics.rst, Tutorial/chapter_introduction.rst, ..., Tutorial/chapter_quick_start.rst, Tutorial/chapter_searchio.rst, Tutorial/chapter_seq_annot.rst, Tutorial/chapter_seq_objects.rst, Tutorial/chapter_seqio.rst, Tutorial/chapter_testing.rst, Tutorial/chapter_uniprot.rst, Tutorial/index.rst, api/index.rst, index.rst
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/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/pairwise2.py:278: BiopythonDeprecationWarning: Bio.pairwise2 has been deprecated, and we intend to remove it in a future release of Biopython. As an alternative, please consider using Bio.Align.PairwiseAligner as a replacement, and contact the Biopython developers if you still need the Bio.pairwise2 module.
warnings.warn(
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looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
copying assets...
copying static files...
Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/language_data.js
Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/basic.css
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Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/js/versions.js
copying static files: done
copying extra files...
copying extra files: done
copying assets: done
writing output... [ 0%] Tutorial/chapter_align
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generating indices... genindex py-modindex done
writing additional pages... search done
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dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded.
The HTML pages are in _build/html.
make[2]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc'
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
set -e \
; for avoid in \
PAML_tools EmbossPhylipNew \
MSAProbs_tool PopGen_GenePop PopGen_GenePop_EasyController XXmotif_tool PDB_ResidueDepth mmtf mmtf_online GraphicsBitmaps \
\
BioSQL_MySQLdb BioSQL_psycopg2 \
; do mkdir -p Tests_avoid \
; mv Tests/test_${avoid}.py Tests_avoid \
; done
# For the doc package we need a clean testsuite without all the
# remaining files. So keep a clean copy here
mkdir -p debian/tmp_tests
cp -a Tests debian/tmp_tests
# remove duplicated file
rm -f debian/tmp_tests/Tests/Quality/example.fastq.gz
# Prepare resources necessary to dssp.
mkdir -pv /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data
mkdir: created directory '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data'
cp -v /usr/share/libcifpp/mmcif_pdbx.dic /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data
'/usr/share/libcifpp/mmcif_pdbx.dic' -> '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/mmcif_pdbx.dic'
cp -v /usr/share/libcifpp/mmcif_ma.dic /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data
'/usr/share/libcifpp/mmcif_ma.dic' -> '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/mmcif_ma.dic'
cp -v debian/tests/mini-ccd.cif /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/components.cif
'debian/tests/mini-ccd.cif' -> '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/components.cif'
# We also keep the tests we need to avoid for later inspection
test ! -d Tests_avoid || cp -a Tests_avoid debian/tmp_tests
# in the Debian package dialign it is not needed to set
# DIALIGN2_DIR but the test is verifying this dir to run the
# EMBOSS test test_Emboss also requires to have the environment
# variable EMBOSS_ROOT set
LC_ALL=C.UTF-8 \
dh_auto_test -- \
--test \
--system=custom \
--test-args=' \
set -e; \
mkdir -p {build_dir}/home; \
mkdir -p {build_dir}/Doc/examples; \
cp -a Doc/Tutorial {build_dir}/Doc; \
cp -a Doc/examples {build_dir}/Doc; \
cp -a Tests {build_dir}; \
cd {build_dir}/Tests; \
env DIALIGN2_DIR=/usr/share/dialign \
EMBOSS_ROOT=/usr/lib/emboss \
HOME={build_dir}/home \
{interpreter} run_tests.py --offline'
pybuild --test -i python{version} -p 3.13 --test --system=custom "--test-args= \\\
set -e; \\\
mkdir -p {build_dir}/home; \\\
mkdir -p {build_dir}/Doc/examples; \\\
cp -a Doc/Tutorial {build_dir}/Doc; \\\
cp -a Doc/examples {build_dir}/Doc; \\\
cp -a Tests {build_dir}; \\\
cd {build_dir}/Tests; \\\
env DIALIGN2_DIR=/usr/share/dialign \\\
EMBOSS_ROOT=/usr/lib/emboss \\\
HOME={build_dir}/home \\\
{interpreter} run_tests.py --offline"
I: pybuild base:311: \
set -e; \
mkdir -p /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/home; \
mkdir -p /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples; \
cp -a Doc/Tutorial /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc; \
cp -a Doc/examples /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc; \
cp -a Tests /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build; \
cd /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests; \
env DIALIGN2_DIR=/usr/share/dialign \
EMBOSS_ROOT=/usr/lib/emboss \
HOME=/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/home \
python3.13 run_tests.py --offline
test_Ace ... ok
test_Affy ... ok
test_AlignIO ... ok
test_AlignIO_ClustalIO ... ok
test_AlignIO_EmbossIO ... ok
test_AlignIO_FastaIO ... ok
test_AlignIO_MauveIO ... ok
test_AlignIO_PhylipIO ... ok
test_AlignIO_convert ... ok
test_AlignInfo ... ok
test_Align_Alignment ... ok
test_Align_a2m ... ok
test_Align_bed ... ok
test_Align_bigbed ... ok
test_Align_bigmaf ... ok
test_Align_bigpsl ... ok
test_Align_chain ... ok
test_Align_clustal ... ok
test_Align_codonalign ... ok
test_Align_emboss ... ok
test_Align_exonerate ... ok
test_Align_fasta ... ok
test_Align_hhr ... ok
test_Align_maf ... ok
test_Align_mauve ... ok
test_Align_msf ... ok
test_Align_nexus ... ok
test_Align_phylip ... ok
test_Align_psl ... ok
test_Align_sam ... ok
test_Align_stockholm ... ok
test_Align_tabular ... ok
test_Application ... ok
test_BWA_tool ... ok
test_BioSQL_MySQLdb_online ... skipping. internet not available
test_BioSQL_mysql_connector ... skipping. BioSQL test configuration file biosql.ini missing (see biosql.ini.sample)
test_BioSQL_mysql_connector_online ... skipping. internet not available
test_BioSQL_psycopg2_online ... skipping. internet not available
test_BioSQL_sqlite3 ... ok
test_BioSQL_sqlite3_online ... skipping. internet not available
test_Blast_Record ... ok
test_Blast_parser ... ok
test_CAPS ... ok
test_Chi2 ... ok
test_ClustalOmega_tool ... ok
test_Clustalw_tool ... ok
test_Cluster ... ok
test_CodonTable ... ok
test_ColorSpiral ... ok
test_Compass ... ok
test_Consensus ... ok
test_Dialign_tool ... ok
test_EMBL_unittest ... ok
test_Emboss ... ok
test_EmbossPrimer ... ok
test_Entrez ... ok
test_Entrez_online ... skipping. internet not available
test_Entrez_parser ... ok
test_Enzyme ... ok
test_ExPASy ... skipping. internet not available
test_Fasttree_tool ... ok
test_File ... ok
test_GenBank ... /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/InsdcIO.py:600: BiopythonWarning: Annotation 'Sequence Read Archive: SRX001885, SRX001121, SRX001531, SRX001530, SRX001529' too long
warnings.warn(f"Annotation {text!r} too long", BiopythonWarning)
ok
test_GenomeDiagram ... Warn: Can't find .pfb for face 'Helvetica'
ok
test_GraphicsChromosome ... ok
test_GraphicsDistribution ... ok
test_GraphicsGeneral ... ok
test_HMMCasino ... ok
test_HMMGeneral ... ok
test_KEGG ... ok
test_KEGG_online ... skipping. internet not available
test_KGML_graphics ... ok
test_KGML_graphics_online ... skipping. internet not available
test_KGML_nographics ... ok
test_KeyWList ... ok
test_LogisticRegression ... ok
test_MafIO_index ... ok
test_Mafft_tool ... ok
test_MarkovModel ... ok
test_Medline ... ok
test_Muscle_tool ... ok
test_NCBIXML ... Exception ignored in: <generator object parse at 0x7fa6e2946a40>
Traceback (most recent call last):
File "/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/NCBIXML.py", line 1319, in parse
expat_parser.Parse(NULL, True)
xml.parsers.expat.ExpatError: unclosed token: line 320, column 0
ok
test_NCBI_BLAST_tools ... ok
test_NCBI_qblast ... ok
test_NMR ... ok
test_NaiveBayes ... ok
test_Nexus ... ok
test_PAML_baseml ... ok
test_PAML_codeml ... ok
test_PAML_yn00 ... ok
test_PDB_CEAligner ... ok
test_PDB_DSSP ... ok
test_PDB_Dice ... ok
test_PDB_Disordered ... ok
test_PDB_Exposure ... ok
test_PDB_FragmentMapper ... ok
test_PDB_KDTree ... ok
test_PDB_MMCIF2Dict ... ok
test_PDB_MMCIFIO ... ok
test_PDB_MMCIFParser ... ok
test_PDB_NACCESS ... ok
test_PDB_PDBIO ... ok
test_PDB_PDBList ... skipping. internet not available
test_PDB_PDBMLParser ... ok
test_PDB_PDBParser ... ok
test_PDB_PSEA ... skipping. Download and install psea from ftp://ftp.lmcp.jussieu.fr/pub/sincris/software/protein/p-sea/. Make sure that psea is on path
test_PDB_Polypeptide ... ok
test_PDB_QCPSuperimposer ... ok
test_PDB_SASA ... ok
test_PDB_SMCRA ... ok
test_PDB_Selection ... ok
test_PDB_StructureAlignment ... ok
test_PDB_Superimposer ... ok
test_PDB_alphafold_db ... skipping. internet not available
test_PDB_binary_cif ... /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 1, ' ') redefined at line 7.
warnings.warn(
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 15, ' ') redefined at line 144.
warnings.warn(
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 15, ' ') redefined at line 153.
warnings.warn(
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 1, ' ') redefined at line 0.
warnings.warn(
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 15, ' ') redefined at line 0.
warnings.warn(
ok
test_PDB_internal_coords ... ok
test_PDB_parse_pdb_header ... ok
test_PDB_vectors ... ok
test_PQR ... ok
test_Pathway ... ok
test_Phd ... ok
test_Phylo ... ok
test_PhyloXML ... ok
test_Phylo_CDAO ... ok
test_Phylo_NeXML ... ok
test_Phylo_igraph ... ok
test_Phylo_matplotlib ... ok
test_Phylo_networkx ... ok
test_PopGen_GenePop_nodepend ... ok
test_Prank_tool ... ok
test_Probcons_tool ... ok
test_ProtParam ... ok
test_RCSBFormats ... ok
test_Restriction ... ok
test_SCOP_Astral ... ok
test_SCOP_Cla ... ok
test_SCOP_Des ... ok
test_SCOP_Dom ... ok
test_SCOP_Hie ... ok
test_SCOP_Raf ... ok
test_SCOP_Residues ... ok
test_SCOP_Scop ... ok
test_SVDSuperimposer ... ok
test_SearchIO_blast_tab ... ok
test_SearchIO_blast_tab_index ... ok
test_SearchIO_blast_xml ... ok
test_SearchIO_blast_xml_index ... ok
test_SearchIO_blat_psl ... ok
test_SearchIO_blat_psl_index ... ok
test_SearchIO_exonerate ... ok
test_SearchIO_exonerate_text_index ... ok
test_SearchIO_exonerate_vulgar_index ... ok
test_SearchIO_fasta_m10 ... ok
test_SearchIO_fasta_m10_index ... ok
test_SearchIO_hhsuite2_text ... ok
test_SearchIO_hmmer2_text ... ok
test_SearchIO_hmmer2_text_index ... ok
test_SearchIO_hmmer3_domtab ... ok
test_SearchIO_hmmer3_domtab_index ... ok
test_SearchIO_hmmer3_tab ... ok
test_SearchIO_hmmer3_tab_index ... ok
test_SearchIO_hmmer3_text ... ok
test_SearchIO_hmmer3_text_index ... ok
test_SearchIO_interproscan_xml ... ok
test_SearchIO_model ... ok
test_SearchIO_write ... ok
test_SeqFeature ... ok
test_SeqIO ... ok
test_SeqIO_AbiIO ... ok
test_SeqIO_FastaIO ... ok
test_SeqIO_Gck ... ok
test_SeqIO_Gfa ... ok
test_SeqIO_Insdc ... ok
test_SeqIO_NibIO ... ok
test_SeqIO_PdbIO ... ok
test_SeqIO_QualityIO ... ok
test_SeqIO_SeqXML ... ok
test_SeqIO_SffIO ... ok
test_SeqIO_SnapGene ... ok
test_SeqIO_TwoBitIO ... ok
test_SeqIO_UniprotIO ... ok
test_SeqIO_Xdna ... ok
test_SeqIO_features ... ok
test_SeqIO_index ... ok
test_SeqIO_online ... skipping. internet not available
test_SeqIO_write ... ok
test_SeqRecord ... ok
test_SeqUtils ... ok
test_Seq_objs ... ok
test_SwissProt ... ok
test_TCoffee_tool ... ok
test_TogoWS ... skipping. internet not available
test_TreeConstruction ... ok
test_Tutorial ... /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__init__.py:3969: BiopythonWarning: One or more gap scores are greater than mismatch score. Algorithm may return incorrect results.
score, paths = super().align(sA, sB, strand)
ok
test_UniGene ... ok
test_UniProt ... skipping. internet not available
test_UniProt_GOA ... ok
test_align ... ok
test_align_substitution_matrices ... ok
test_bgzf ... ok
test_cellosaurus ... ok
test_codonalign ... ok
test_geo ... ok
test_kNN ... ok
test_motifs ... ok
test_motifs_online ... skipping. internet not available
test_pairwise2 ... ok
test_pairwise2_no_C ... ok
test_pairwise_aligner ... ok
test_pairwise_alignment_map ... ok
test_phenotype ... ok
test_phenotype_fit ... ok
test_phyml_tool ... ok
test_prodoc ... ok
test_prosite ... ok
test_raxml_tool ... ok
test_samtools_tool ... ok
test_seq ... ok
test_translate ... ok
Bio docstring test ... ok
Bio.Affy docstring test ... ok
Bio.Affy.CelFile docstring test ... ok
Bio.Align docstring test ... ok
Bio.Align.AlignInfo docstring test ... ok
Bio.Align.Applications docstring test ... ok
Bio.Align.Applications._ClustalOmega docstring test ... ok
Bio.Align.Applications._Clustalw docstring test ... ok
Bio.Align.Applications._Dialign docstring test ... ok
Bio.Align.Applications._MSAProbs docstring test ... ok
Bio.Align.Applications._Mafft docstring test ... ok
Bio.Align.Applications._Muscle docstring test ... ok
Bio.Align.Applications._Prank docstring test ... ok
Bio.Align.Applications._Probcons docstring test ... ok
Bio.Align.Applications._TCoffee docstring test ... ok
Bio.Align._aligncore docstring test ... ok
Bio.Align._codonaligner docstring test ... ok
Bio.Align._pairwisealigner docstring test ... ok
Bio.Align.a2m docstring test ... ok
Bio.Align.analysis docstring test ... ok
Bio.Align.bed docstring test ... ok
Bio.Align.bigbed docstring test ... ok
Bio.Align.bigmaf docstring test ... ok
Bio.Align.bigpsl docstring test ... ok
Bio.Align.chain docstring test ... ok
Bio.Align.clustal docstring test ... ok
Bio.Align.emboss docstring test ... ok
Bio.Align.exonerate docstring test ... ok
Bio.Align.fasta docstring test ... ok
Bio.Align.hhr docstring test ... ok
Bio.Align.interfaces docstring test ... ok
Bio.Align.maf docstring test ... ok
Bio.Align.mauve docstring test ... ok
Bio.Align.msf docstring test ... ok
Bio.Align.nexus docstring test ... ok
Bio.Align.phylip docstring test ... ok
Bio.Align.psl docstring test ... ok
Bio.Align.sam docstring test ... ok
Bio.Align.stockholm docstring test ... ok
Bio.Align.substitution_matrices docstring test ... ok
Bio.Align.tabular docstring test ... ok
Bio.AlignIO docstring test ... ok
Bio.AlignIO.ClustalIO docstring test ... ok
Bio.AlignIO.EmbossIO docstring test ... ok
Bio.AlignIO.FastaIO docstring test ... ok
Bio.AlignIO.Interfaces docstring test ... ok
Bio.AlignIO.MafIO docstring test ... ok
Bio.AlignIO.MauveIO docstring test ... ok
Bio.AlignIO.MsfIO docstring test ... ok
Bio.AlignIO.NexusIO docstring test ... ok
Bio.AlignIO.PhylipIO docstring test ... ok
Bio.AlignIO.StockholmIO docstring test ... ok
Bio.Application docstring test ... ok
Bio.Blast docstring test ... ok
Bio.Blast.Applications docstring test ... ok
Bio.Blast.NCBIWWW docstring test ... ok
Bio.Blast.NCBIXML docstring test ... ok
Bio.Blast._parser docstring test ... ok
Bio.Blast._writers docstring test ... ok
Bio.CAPS docstring test ... ok
Bio.Cluster docstring test ... ok
Bio.Cluster._cluster docstring test ... ok
Bio.Compass docstring test ... ok
Bio.Data docstring test ... ok
Bio.Data.CodonTable docstring test ... ok
Bio.Data.IUPACData docstring test ... ok
Bio.Data.PDBData docstring test ... ok
Bio.Emboss docstring test ... ok
Bio.Emboss.Applications docstring test ... ok
Bio.Emboss.Primer3 docstring test ... ok
Bio.Emboss.PrimerSearch docstring test ... ok
Bio.Entrez.Parser docstring test ... ok
Bio.ExPASy.Enzyme docstring test ... ok
Bio.ExPASy.Prodoc docstring test ... ok
Bio.ExPASy.Prosite docstring test ... ok
Bio.ExPASy.ScanProsite docstring test ... ok
Bio.File docstring test ... ok
Bio.GenBank docstring test ... ok
Bio.GenBank.Record docstring test ... ok
Bio.GenBank.Scanner docstring test ... ok
Bio.GenBank.utils docstring test ... ok
Bio.Geo docstring test ... ok
Bio.Geo.Record docstring test ... ok
Bio.Graphics docstring test ... ok
Bio.Graphics.BasicChromosome docstring test ... ok
Bio.Graphics.ColorSpiral docstring test ... ok
Bio.Graphics.Comparative docstring test ... ok
Bio.Graphics.DisplayRepresentation docstring test ... ok
Bio.Graphics.Distribution docstring test ... ok
Bio.Graphics.GenomeDiagram docstring test ... ok
Bio.Graphics.GenomeDiagram._AbstractDrawer docstring test ... ok
Bio.Graphics.GenomeDiagram._CircularDrawer docstring test ... ok
Bio.Graphics.GenomeDiagram._Colors docstring test ... ok
Bio.Graphics.GenomeDiagram._CrossLink docstring test ... ok
Bio.Graphics.GenomeDiagram._Diagram docstring test ... ok
Bio.Graphics.GenomeDiagram._Feature docstring test ... ok
Bio.Graphics.GenomeDiagram._FeatureSet docstring test ... ok
Bio.Graphics.GenomeDiagram._Graph docstring test ... ok
Bio.Graphics.GenomeDiagram._GraphSet docstring test ... ok
Bio.Graphics.GenomeDiagram._LinearDrawer docstring test ... ok
Bio.Graphics.GenomeDiagram._Track docstring test ... ok
Bio.Graphics.KGML_vis docstring test ... ok
Bio.HMM docstring test ... ok
Bio.HMM.DynamicProgramming docstring test ... ok
Bio.HMM.MarkovModel docstring test ... ok
Bio.HMM.Trainer docstring test ... ok
Bio.HMM.Utilities docstring test ... ok
Bio.KEGG docstring test ... ok
Bio.KEGG.Compound docstring test ... ok
Bio.KEGG.Enzyme docstring test ... ok
Bio.KEGG.Gene docstring test ... ok
Bio.KEGG.KGML docstring test ... ok
Bio.KEGG.KGML.KGML_parser docstring test ... ok
Bio.KEGG.KGML.KGML_pathway docstring test ... ok
Bio.KEGG.Map docstring test ... ok
Bio.KEGG.REST docstring test ... ok
Bio.LogisticRegression docstring test ... ok
Bio.MarkovModel docstring test ... ok
Bio.MaxEntropy docstring test ... ok
Bio.Medline docstring test ... ok
Bio.NMR docstring test ... ok
Bio.NMR.NOEtools docstring test ... ok
Bio.NMR.xpktools docstring test ... ok
Bio.NaiveBayes docstring test ... ok
Bio.Nexus docstring test ... ok
Bio.Nexus.Nexus docstring test ... ok
Bio.Nexus.Nodes docstring test ... ok
Bio.Nexus.StandardData docstring test ... ok
Bio.Nexus.Trees docstring test ... ok
Bio.Nexus.cnexus docstring test ... ok
Bio.PDB docstring test ... ok
Bio.PDB.AbstractPropertyMap docstring test ... ok
Bio.PDB.Atom docstring test ... ok
Bio.PDB.Chain docstring test ... ok
Bio.PDB.DSSP docstring test ... ok
Bio.PDB.Dice docstring test ... ok
Bio.PDB.Entity docstring test ... ok
Bio.PDB.FragmentMapper docstring test ... ok
Bio.PDB.HSExposure docstring test ... ok
Bio.PDB.MMCIF2Dict docstring test ... ok
Bio.PDB.MMCIFParser docstring test ... ok
Bio.PDB.Model docstring test ... ok
Bio.PDB.NACCESS docstring test ... ok
Bio.PDB.NeighborSearch docstring test ... ok
Bio.PDB.PDBExceptions docstring test ... ok
Bio.PDB.PDBIO docstring test ... ok
Bio.PDB.PDBList docstring test ... ok
Bio.PDB.PDBMLParser docstring test ... ok
Bio.PDB.PDBParser docstring test ... ok
Bio.PDB.PICIO docstring test ... ok
Bio.PDB.PSEA docstring test ... ok
Bio.PDB.Polypeptide docstring test ... ok
Bio.PDB.Residue docstring test ... ok
Bio.PDB.ResidueDepth docstring test ... ok
Bio.PDB.SASA docstring test ... ok
Bio.PDB.SCADIO docstring test ... ok
Bio.PDB.Selection docstring test ... ok
Bio.PDB.Structure docstring test ... ok
Bio.PDB.StructureAlignment docstring test ... ok
Bio.PDB.StructureBuilder docstring test ... ok
Bio.PDB.Superimposer docstring test ... ok
Bio.PDB._bcif_helper docstring test ... ok
Bio.PDB.alphafold_db docstring test ... ok
Bio.PDB.binary_cif docstring test ... ok
Bio.PDB.ccealign docstring test ... ok
Bio.PDB.cealign docstring test ... ok
Bio.PDB.ic_data docstring test ... ok
Bio.PDB.ic_rebuild docstring test ... ok
Bio.PDB.internal_coords docstring test ... ok
Bio.PDB.kdtrees docstring test ... ok
Bio.PDB.mmcifio docstring test ... ok
Bio.PDB.mmtf docstring test ... ok
Bio.PDB.mmtf.DefaultParser docstring test ... ok
Bio.PDB.mmtf.mmtfio docstring test ... ok
Bio.PDB.parse_pdb_header docstring test ... ok
Bio.PDB.qcprot docstring test ... ok
Bio.PDB.vectors docstring test ... ok
Bio.Pathway docstring test ... ok
Bio.Pathway.Rep docstring test ... ok
Bio.Pathway.Rep.Graph docstring test ... ok
Bio.Pathway.Rep.MultiGraph docstring test ... ok
Bio.Phylo docstring test ... ok
Bio.Phylo.Applications docstring test ... ok
Bio.Phylo.Applications._Fasttree docstring test ... ok
Bio.Phylo.Applications._Phyml docstring test ... ok
Bio.Phylo.Applications._Raxml docstring test ... ok
Bio.Phylo.BaseTree docstring test ... ok
Bio.Phylo.CDAO docstring test ... ok
Bio.Phylo.CDAOIO docstring test ... ok
Bio.Phylo.Consensus docstring test ... ok
Bio.Phylo.NeXML docstring test ... ok
Bio.Phylo.NeXMLIO docstring test ... ok
Bio.Phylo.Newick docstring test ... ok
Bio.Phylo.NewickIO docstring test ... ok
Bio.Phylo.NexusIO docstring test ... ok
Bio.Phylo.PAML docstring test ... ok
Bio.Phylo.PAML._paml docstring test ... ok
Bio.Phylo.PAML._parse_baseml docstring test ... ok
Bio.Phylo.PAML._parse_codeml docstring test ... ok
Bio.Phylo.PAML._parse_yn00 docstring test ... ok
Bio.Phylo.PAML.baseml docstring test ... ok
Bio.Phylo.PAML.chi2 docstring test ... ok
Bio.Phylo.PAML.codeml docstring test ... ok
Bio.Phylo.PAML.yn00 docstring test ... ok
Bio.Phylo.PhyloXML docstring test ... ok
Bio.Phylo.PhyloXMLIO docstring test ... ok
Bio.Phylo.TreeConstruction docstring test ... ok
Bio.Phylo._cdao_owl docstring test ... ok
Bio.Phylo._io docstring test ... ok
Bio.Phylo._utils docstring test ... ok
Bio.PopGen docstring test ... ok
Bio.PopGen.GenePop docstring test ... ok
Bio.PopGen.GenePop.Controller docstring test ... ok
Bio.PopGen.GenePop.EasyController docstring test ... ok
Bio.PopGen.GenePop.FileParser docstring test ... ok
Bio.PopGen.GenePop.LargeFileParser docstring test ... ok
Bio.Restriction docstring test ... ok
Bio.Restriction.PrintFormat docstring test ... ok
Bio.Restriction.Restriction docstring test ... ok
Bio.Restriction.Restriction_Dictionary docstring test ... ok
Bio.SCOP docstring test ... ok
Bio.SCOP.Cla docstring test ... ok
Bio.SCOP.Des docstring test ... ok
Bio.SCOP.Dom docstring test ... ok
Bio.SCOP.Hie docstring test ... ok
Bio.SCOP.Raf docstring test ... ok
Bio.SCOP.Residues docstring test ... ok
Bio.SVDSuperimposer docstring test ... ok
Bio.SearchIO docstring test ... ok
Bio.SearchIO.BlastIO docstring test ... ok
Bio.SearchIO.BlastIO.blast_tab docstring test ... ok
Bio.SearchIO.BlastIO.blast_xml docstring test ... ok
Bio.SearchIO.BlatIO docstring test ... ok
Bio.SearchIO.ExonerateIO docstring test ... ok
Bio.SearchIO.ExonerateIO._base docstring test ... ok
Bio.SearchIO.ExonerateIO.exonerate_cigar docstring test ... ok
Bio.SearchIO.ExonerateIO.exonerate_text docstring test ... ok
Bio.SearchIO.ExonerateIO.exonerate_vulgar docstring test ... ok
Bio.SearchIO.FastaIO docstring test ... ok
Bio.SearchIO.HHsuiteIO docstring test ... ok
Bio.SearchIO.HHsuiteIO.hhsuite2_text docstring test ... ok
Bio.SearchIO.HmmerIO docstring test ... ok
Bio.SearchIO.HmmerIO._base docstring test ... ok
Bio.SearchIO.HmmerIO.hmmer2_text docstring test ... ok
Bio.SearchIO.HmmerIO.hmmer3_domtab docstring test ... ok
Bio.SearchIO.HmmerIO.hmmer3_tab docstring test ... ok
Bio.SearchIO.HmmerIO.hmmer3_text docstring test ... ok
Bio.SearchIO.InterproscanIO docstring test ... ok
Bio.SearchIO.InterproscanIO.interproscan_xml docstring test ... ok
Bio.SearchIO._index docstring test ... ok
Bio.SearchIO._model docstring test ... ok
Bio.SearchIO._model._base docstring test ... ok
Bio.SearchIO._model.hit docstring test ... ok
Bio.SearchIO._model.hsp docstring test ... ok
Bio.SearchIO._model.query docstring test ... ok
Bio.SearchIO._utils docstring test ... ok
Bio.Seq docstring test ... ok
Bio.SeqFeature docstring test ... ok
Bio.SeqIO docstring test ... ok
Bio.SeqIO.AbiIO docstring test ... ok
Bio.SeqIO.AceIO docstring test ... ok
Bio.SeqIO.FastaIO docstring test ... ok
Bio.SeqIO.GckIO docstring test ... ok
Bio.SeqIO.GfaIO docstring test ... ok
Bio.SeqIO.IgIO docstring test ... ok
Bio.SeqIO.InsdcIO docstring test ... ok
Bio.SeqIO.Interfaces docstring test ... ok
Bio.SeqIO.NibIO docstring test ... ok
Bio.SeqIO.PdbIO docstring test ... ok
Bio.SeqIO.PhdIO docstring test ... ok
Bio.SeqIO.PirIO docstring test ... ok
Bio.SeqIO.QualityIO docstring test ... ok
Bio.SeqIO.SeqXmlIO docstring test ... ok
Bio.SeqIO.SffIO docstring test ... ok
Bio.SeqIO.SnapGeneIO docstring test ... ok
Bio.SeqIO.SwissIO docstring test ... ok
Bio.SeqIO.TabIO docstring test ... ok
Bio.SeqIO.TwoBitIO docstring test ... ok
Bio.SeqIO.UniprotIO docstring test ... ok
Bio.SeqIO.XdnaIO docstring test ... ok
Bio.SeqIO._index docstring test ... ok
Bio.SeqIO._twoBitIO docstring test ... ok
Bio.SeqRecord docstring test ... ok
Bio.SeqUtils docstring test ... ok
Bio.SeqUtils.CheckSum docstring test ... ok
Bio.SeqUtils.IsoelectricPoint docstring test ... ok
Bio.SeqUtils.MeltingTemp docstring test ... ok
Bio.SeqUtils.ProtParam docstring test ... ok
Bio.SeqUtils.ProtParamData docstring test ... ok
Bio.SeqUtils.lcc docstring test ... ok
Bio.Sequencing docstring test ... ok
Bio.Sequencing.Ace docstring test ... ok
Bio.Sequencing.Applications docstring test ... ok
Bio.Sequencing.Applications._Novoalign docstring test ... ok
Bio.Sequencing.Applications._bwa docstring test ... ok
Bio.Sequencing.Applications._samtools docstring test ... ok
Bio.Sequencing.Phd docstring test ... ok
Bio.SwissProt docstring test ... ok
Bio.SwissProt.KeyWList docstring test ... ok
Bio.UniGene docstring test ... ok
Bio.UniProt.GOA docstring test ... ok
Bio._utils docstring test ... ok
Bio.bgzf docstring test ... ok
Bio.codonalign docstring test ... ok
Bio.codonalign.codonalignment docstring test ... ok
Bio.codonalign.codonseq docstring test ... ok
Bio.cpairwise2 docstring test ... ok
Bio.kNN docstring test ... ok
Bio.motifs docstring test ... ok
Bio.motifs._pwm docstring test ... ok
Bio.motifs.alignace docstring test ... ok
Bio.motifs.applications docstring test ... ok
Bio.motifs.applications._xxmotif docstring test ... ok
Bio.motifs.clusterbuster docstring test ... ok
Bio.motifs.jaspar docstring test ... ok
Bio.motifs.jaspar.db docstring test ... ok
Bio.motifs.mast docstring test ... ok
Bio.motifs.matrix docstring test ... ok
Bio.motifs.meme docstring test ... ok
Bio.motifs.minimal docstring test ... ok
Bio.motifs.pfm docstring test ... ok
Bio.motifs.thresholds docstring test ... ok
Bio.motifs.transfac docstring test ... ok
Bio.motifs.xms docstring test ... ok
Bio.pairwise2 docstring test ... ok
Bio.phenotype docstring test ... ok
Bio.phenotype.phen_micro docstring test ... ok
Bio.phenotype.pm_fitting docstring test ... ok
BioSQL docstring test ... ok
BioSQL.BioSeq docstring test ... ok
BioSQL.BioSeqDatabase docstring test ... ok
BioSQL.DBUtils docstring test ... ok
BioSQL.Loader docstring test ... ok
----------------------------------------------------------------------
Ran 552 tests in 1322.251 seconds
Skipping any tests requiring internet access
Python version: 3.13.2 (main, Feb 5 2025, 01:23:35) [GCC 14.2.0]
Operating system: posix linux
rm -fr -- /tmp/dh-xdg-rundir-l3yDq0bY
# Cleanup steps after tests.
set -e \
; if [ -d Tests_avoid ] \
; then mv Tests_avoid/* Tests \
; rmdir Tests_avoid \
; fi
rm -r /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=pybuild
dh_prep -O--buildsystem=pybuild
rm -f -- debian/python3-biopython.substvars debian/python-biopython-doc.substvars debian/python3-biopython-sql.substvars
rm -fr -- debian/.debhelper/generated/python3-biopython/ debian/python3-biopython/ debian/tmp/ debian/.debhelper/generated/python-biopython-doc/ debian/python-biopython-doc/ debian/.debhelper/generated/python3-biopython-sql/ debian/python3-biopython-sql/
rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_auto_install
install -m0755 -d /build/reproducible-path/python-biopython-1.85\+dfsg/debian/tmp
pybuild --install -i python{version} -p 3.13 --dest-dir=/build/reproducible-path/python-biopython-1.85\+dfsg/debian/tmp
I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:79: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running egg_info
writing biopython.egg-info/PKG-INFO
writing dependency_links to biopython.egg-info/dependency_links.txt
writing requirements to biopython.egg-info/requires.txt
writing top-level names to biopython.egg-info/top_level.txt
reading manifest file 'biopython.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files found matching 'Doc/_build'
warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '*.py{}' found anywhere in distribution
warning: no previously-included files matching '*.py-e' found anywhere in distribution
adding license file 'LICENSE'
adding license file 'LICENSE.rst'
writing manifest file 'biopython.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are
already explicitly excluding 'Bio.Align.substitution_matrices.data' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Entrez.DTDs' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Entrez.DTDs' to be distributed and are
already explicitly excluding 'Bio.Entrez.DTDs' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Entrez.XSDs' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Entrez.XSDs' to be distributed and are
already explicitly excluding 'Bio.Entrez.XSDs' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
running build_ext
running install_lib
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/other_trees.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_tab_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Probcons_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Enzyme.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_maf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_PhylipIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/dottednum.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/lysinYangSwanson2002.nuc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/aa_alignment.phylip -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/longnames.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/alignment.phylip -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/dottednames.phylip -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/lysin.trees -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/species.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/lysin.trees.4.6 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/bad.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/tree_regexp_versatility.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/baseml_alpha1rho1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/baseml_SE.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml44c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml41.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml43.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml44.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/bad_results.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00_dottednum-4_9i.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00_dotted-4_9i.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00_long-4_8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/gen_results.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/bad3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/NSsite3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/all_NSsites.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/aa_pairwise.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/aa_model0.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/m2a_rel.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/codeml.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/freeratio.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/clademodelC.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/pairwise.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/branchsiteA.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/SE.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/species.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model6.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model7.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK4.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nhomo3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nhomo1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model2.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/baseml.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK2.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model8.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model0.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/alpha1rho1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nhomo4.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model4.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model5.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/SE.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/bad1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/bad2.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00_long.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00_dotted.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00_dottednum.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/biosql.ini.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/GU949562.1.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap_fuzzy.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/cor6_6.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.faa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/origin_line.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/blank_seq.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/DS830848.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_loc_wrap.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/empty_version.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/HM138502_output.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/one_of.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_000932.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/KF527485_output.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/empty_accession.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_000932.gb.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/iro.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.fna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/EU851978_output.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NT_019265.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/gbvrl1_start.seq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/qualifier_escaping_write.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.tsv -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_locus_line_spacing.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/noref.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/HM138502.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_misc_feature.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/tsa_acropora.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_000932.faa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/protein_refseq.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_structured_comment.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/negative_location.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/qualifier_escaping_read.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_product.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/noref_date_warning.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/EZ116220.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/addgene-plasmid-39296-sequence-49545.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/tls_KDHP01000000.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/pBAD30.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/cor6_6.gb.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/dbsource_wrap.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/KF527485.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/1MRR_A.gp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/no_end_marker.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/wrong_sequence_indent.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/arab1.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/protein_refseq2.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/empty_feature_qualifier.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NP_416719.gbwithparts -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/addgene-plasmid-11664-sequence-180430.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap_CDS.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/extra_keywords.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/EU851978.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.ffn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/pri1.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap_linear.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/no_origin_no_end.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/IntelliGenetics/vpu_nucaligned.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/IntelliGenetics/VIF_mase-pro.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/IntelliGenetics/TAT_mase_nuc.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_convert.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_SMCRA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_CodonTable.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Compass.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Pathway.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.adh.de.oops.html.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/minimal_test.meme -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.INO_up800.classic.oops.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.psp_test.classic.zoops.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.Klf1-200.cd.oops.xml.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.Klf1-200.cd.oops.xml.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.adh.classic.oops.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/Arnt.sites -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/fourrows.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.farntrans5.classic.anr.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.crp0.de.oops.txt.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/alignace.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/clusterbuster.pfm.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/MA0056.1.transfac -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/REB1.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/clusterbuster.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.crp0.de.oops.txt.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/transfac.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/abdb.xms -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/SRF.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/minimal_test_rna.meme -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/fourcolumns.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.adh.de.oops.html.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blat_psl_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_pcr.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218L_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mirna.tab -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218_blastp_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_003.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_005.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mirna.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_005.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_009.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_010.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_short_result.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_012.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_013.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_007.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2228_tblastn_001.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_wait.html -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastx_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_psiblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2222_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_002.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_001.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_rpsblast_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_011.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_disco.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastn_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_008.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/phiblast.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_005.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_006.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastx_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/wnts.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_actin.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastp_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_006.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/html_msgid_29_blastx_001.html -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/megablast_legacy.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_psiblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218L_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2222_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_orchid.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2228_tblastx_001.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_005.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_short_empty.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_004.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/wnts.xml.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Mafft_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Entrez_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_psycopg2_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cluster
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cluster/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cluster
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ClustalOmega_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/valine.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/lactate.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/lipoprotein.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Application.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_tabular.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_samtools_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/nexml.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/timetree.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/meta_taxa.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/taxa.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/tolweb.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/meta_types.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/sets.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/treebase-record.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/trees-uris.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/edgelabels.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/trees.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/phenoscape.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/characters.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_geo.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GraphicsGeneral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_CAPS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ColorSpiral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ExPASy.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GraphicsDistribution.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_SMCRA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_NACCESS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_sqlite3_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blat_psl_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Selection.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_kNN.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PDBIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_SASA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Prank_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NCBIXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_MMCIF2Dict.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Dialign_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bigmaf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KEGG_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_NibIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_model.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_AbiIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_prodoc.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_FastaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bigpsl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_ClustalIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_StructureAlignment.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_File.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blat_psl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_motifs_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Medline.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Affy.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Polypeptide.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_matplotlib.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_align.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_alphafold_db.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_fasta_m10.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_pairwise2.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Fasttree_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_EmbossPrimer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_sam.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Residues.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/common_BioSQL_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_features.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_codonalign.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_SffIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_QCPSuperimposer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Enzyme.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Compass.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bed.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_domtab.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_tabular.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Scop.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PQR.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blast_tab.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_MySQLdb_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_sqlite3.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PAML_baseml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NMR.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Entrez.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hhsuite2_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_FragmentMapper.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_HMMCasino.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_clustal.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Probcons_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Blast_parser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_psycopg2_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Blast_Record.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_Xdna.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_EmbossIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_MMCIFParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KEGG.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Des.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KGML_graphics_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_TwoBitIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_TCoffee_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_samtools_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KGML_graphics.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PSEA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Seq_objs.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Entrez_parser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_CDAO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_HMMGeneral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_CodonTable.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_DSSP.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_fasta.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_mauve.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Pathway.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_SnapGene.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer2_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_pairwise_aligner.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_emboss.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Hie.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_vectors.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_exonerate.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PAML_codeml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_bgzf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_exonerate_vulgar_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bigbed.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_domtab_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_LogisticRegression.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_KDTree.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_pairwise2_no_C.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Cla.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_QualityIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_binary_cif.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_networkx.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_Gck.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_exonerate.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_motifs.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Restriction.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_a2m.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_UniprotIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SVDSuperimposer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_TreeConstruction.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_psl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/requires_internet.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PhyloXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_prosite.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_text_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_fasta_m10_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_TogoWS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Dom.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Raf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_chain.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Clustalw_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_mysql_connector.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_translate.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PDBMLParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_MarkovModel.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_phenotype.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Application.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignInfo.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blast_xml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_nexus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_UniProt.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BWA_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phd.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NCBI_qblast.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqFeature.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Muscle_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_write.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blast_xml_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_Insdc.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/common_BioSQL.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Astral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Chi2.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_MauveIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KeyWList.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqRecord.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KGML_nographics.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_align_substitution_matrices.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer2_text_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_PhylipIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Mafft_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GenomeDiagram.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_convert.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Ace.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_RCSBFormats.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Nexus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ClustalOmega_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SwissProt.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_phylip.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GenBank.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ExPASy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Scop.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SVDSuperimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Superimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBMLParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise2_no_C.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Saf
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_TwoBitIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Gfa.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/gene_association.goa_yeast.1.gaf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/goa_human_sample.gpi -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/goa_yeast.gpa.59.gpa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/gp_information.goa_yeast.28.gpi -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Xdna/sample-b.xdna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Xdna/sample-a.xdna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_hhr.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/protein_count.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/protein_freq.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/acc_rep_mat.pik -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/redAltAADistrib.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_prosite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/example_nonstandardannotations.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/cath3.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/globins45.ali -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam2.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/simple.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam3.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam6.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam5.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam1.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam4.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam7.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/example.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam2.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam5.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam4.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam3.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/funny.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/common_BioSQL_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/separate.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/equCab1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/separate.xmfa.backbone -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.xmfa.bbcols -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/separate.xmfa.bbcols -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/mm9.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.xmfa.bbcols -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.xmfa.backbone -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.xmfa.backbone -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/canFam2.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_UniProt.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_MMCIFParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_align_substitution_matrices.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_SffIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_fasta_m10_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_CEAligner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Affy/affy_v4_example.CEL -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Affy
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/7rbx_A_hhsearch_trunc.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhblits_emptytable.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhblits.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/allx.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhblits_onlyheader.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/hhpred_9590198.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/hhsearch_q9bsu1_uniclust_w_ss_pfamA_30.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/4y9h_hhsearch_server_NOssm.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhsearch.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/4p79_hhsearch_server_NOssm.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Raf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_tag_name.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_segment_fields.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/bam1_sorted.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1_header.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/sam2.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KEGG_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Astral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_QCPSuperimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_translate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Entrez_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/biosqldb-sqlite.sql -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/cor6_6.db -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/biosqldb-mysql.sql -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/biosqldb-pg.sql -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.long.2bit -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.littleendian.2bit -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.bigendian.2bit -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/map00950.rea -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.4letter -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/compound.irregular -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko01100.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko00253.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko03070.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.irregular -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/map01100.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko00010.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.new -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/gene.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/map03070.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_binary_cif.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ProtParam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PAML_codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/sample-e.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/sample-d.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/sample-f.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_EMBL_unittest.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/wrong_version3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/wrong_version2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/protein_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/wrong_version1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/rna_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/corrupt_example3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/version_01_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/corrupt_example2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/corrupt_example1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/global_species_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/panTro6.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/mm39.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/rn7.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/cow.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/hg38.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/hg38.chrom.sizes -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/rheMac10.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/pig.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/pig.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/ecoli.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/bsubtilis.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/ecoli.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/cow.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/bsubtilis.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5ToPanTro6.over.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5ToPanTro6.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed9.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed3.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed4.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro6.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/balAcu1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed4.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/CAG33136.1.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed4.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed7.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbedtest.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bedExample2.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed7.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/hg38.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_005.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed8.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_002.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed8.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed5.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbedtest.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_001.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/est.panTro5.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/calJac3ToCalJac4.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/mirna.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_35_002.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_002.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_002.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/fasta_34.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed3.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed9.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_002.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/hg19ToHg38.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_002.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/rna.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/rheMac8ToRheMac10.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed6.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_002.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed12.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed8.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed7.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed12.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbedtest.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed3.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed6.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_35_001.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigPsl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed6.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigPsl.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed12.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/est.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbed_extended.bigendian.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbed_extended.littleendian.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_003.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/rn6ToRn7.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/mm10ToMm39.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigPsl.cds -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed5.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed9.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_004.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeuralNetwork
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeuralNetwork/enolase.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeuralNetwork
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Dom.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/ExtendedPhylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/ExtendedPhylip/primates.phyx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/ExtendedPhylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Exposure.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_codonalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_model.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KGML_graphics_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_NACCESS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/msf
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/msf/DOA_prot.msf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/msf
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c2space.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c3space.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c2line.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/haplo3.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/haplo2.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/big.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/haplo.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/paired.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/triple_sff.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_index_at_start.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/greek.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/invalid_greek_E3MFGYR02.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.qual -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_index_in_middle.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/invalid_paired_E3MFGYR02.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_no_manifest.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/triple_sff_rel_paths.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_alt_index_at_end.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_alt_index_at_start.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_vectors.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NCBIXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_even_littleendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_odd_littleendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_even.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_even_bigendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_odd_bigendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_networkx.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_KDTree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/pairwise2_testCases.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PQR.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Consensus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ColorSpiral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_CDAO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_MMCIFIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KeyWList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_a2m.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_UniProt_GOA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/search_tests_common.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/common_BioSQL.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BWA_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_MMCIF2Dict.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_bigarrow_shafts_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_ARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_JAGGY.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/scatter_test_7.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_OCTO.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrow_shafts.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_BIGARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_JAGGY.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/scatter_test_1.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map03070_colors.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_JAGGY.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_labels.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/square_test.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/line_graph.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_BIGARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_JAGGY_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_bigarrow_shafts.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/spiral_test.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_linear.svg -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/random_organism.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrows.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/tRNA_chrom_sf.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_BIGARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrows.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigils.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_BIGARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_meth_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_OCTO.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_ARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_OCTO_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrow_shafts_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/labels_default.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_frag_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_JAGGY_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_BIGARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_labels.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/multi_bar.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map03070_transparency.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_OCTO.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_OCTO.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_BIGARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map01100_widths.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_JAGGY.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/line_graph_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_meth_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_OCTO_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigils.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_labels_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_ARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/labels_default.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrows_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_frag_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrow_shafts.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/simple_bar.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_bigarrow_shafts.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_ARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map01100_transparency.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map03070_original.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/tRNA_chrom.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/organism.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_ARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigils_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_circular.svg -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/organism.eps -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/organism.svg -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PQR
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_big.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10.mafindex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_big.mafindex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bundle_without_target.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bundle_without_target.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/length_coords_mismatch.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bug2453.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bigMaf.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/corrupt.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/invalid.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_test.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_bad.mafindex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/cnksr3.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_test.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/unfinished.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_bad.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/humor.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_matplotlib.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_align.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00159.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00546.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00100.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/prosite.excerpt.doc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00144.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00933.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00640.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00149.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00113.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00424.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00340.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00472.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00787.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00432.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00165.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00107.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00488.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Selection.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output011.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output009.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/lupine.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/f003.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/dups.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output003.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/f002 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/elderberry.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/lavender.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output002.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster_no_wrap.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/protein_lib.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/tc_out.msf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/nucleotide_m8CB.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output004.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output010.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output015.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output006.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/protein_m8CB.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output016.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/f001 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/centaurea.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output012.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output008.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output014.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/sweetpea.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/phlox.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output001.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster_pearson.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output005.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/nucleotide_lib.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output007.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output013.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/fa01 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/rose.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster_blast.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/wisteria.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/protein_m8CC.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/flowers.pro.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/nucleotide_m8CC.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/rosemary.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blat_psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Residues.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/CodonUsage
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bigpsl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_EmbossIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_StructureAlignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_geo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_motifs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GenBank.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Restriction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_igraph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cellosaurus/cell_lines_2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cellosaurus/cell_lines_1.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cellosaurus/cell_lines_3.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_NibIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_TCoffee_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GenomeDiagram.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM700.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_affy.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM804.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_dual.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_series.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM691.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_platform.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_family.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_affy_chp.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSE16.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_HMMGeneral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_phenotype.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/B_nuc.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/Cw_prot.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/DMA_nuc.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/DMB_prot.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/DD231055_edited.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/DD231055_edited2.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/U87107.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/TRBG361.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/location_wrap.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/AAA03323.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/Human_contigs.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/kipo_prt_sample.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/A04195.imgt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/epo_prt_selection.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/DS830848.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/SC10H5.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/xx_after_co.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/embl_with_0_line.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/AE017046.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/patents.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/101ma_no_coords.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/hla_3260_sample.imgt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Disordered.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/meta.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/meta2.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/meta9.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KGML_nographics.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Gck.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NaiveBayes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/egfr_id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/adh.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl2.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/egfr_pro.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/egfr_nucl.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro3.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro4.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro2.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro5.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/drosophila.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl3.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl4.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl5.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_bgzf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NMR.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_stockholm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_UniGene.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_TogoWS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_affine_local_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_genome2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_dna2protein_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cdna2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ner.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_est2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_trans_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cigar_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_none.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_trans_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_multiple_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_affine_local.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_dna2protein_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_est2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_dna2protein.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_met_intron_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ner_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_cigar_fshifts2.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_multiple.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_multiple_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ner_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cdna2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_trans.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_met_intron_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_affine_local_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_met_intron.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cdna2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_est2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Registry/EDD_RAT.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Registry/seqs.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_phylip.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/biosql.ini.appveyor -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_TreeConstruction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Ace/seq.cap.ace -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Ace/consed_sample.ace -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/FSSP
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/test_Nexus_input.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/codonposset.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/int_node_labels.nwk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/ByteOrderMarkFile.nwk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/bats.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise_aligner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/7CFN.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.asa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1AS5.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4CUP.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/dssp_xtra_Sander.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/7CFN_aligned.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/ions.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/lib_10_z_5.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6wg6.bcif.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/3JQH.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.mmtf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Ahmad_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1SSU_mod.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Miller_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4Q9R_min.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4ZHL.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1MOM_min.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1gbt.bcif.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.xyzr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/occupancy.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1SSU_mod.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1GBT.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4ZHL.mmtf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/disordered.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6WQA.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1LCD.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG_noheader.dssp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2XHE.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2OFG.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Sander_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6WG6.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2XHE.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6WG6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/d256ba_.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/header.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.rsa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/a_structure.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2n0n_M1.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG.dssp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1LCD.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/7DDO.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Wilke_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/3jqh.bcif.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A7G.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/a_structure.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/3JQH.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4CUP.mmtf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/alignment_file.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1GBT.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KGML_graphics.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Polypeptide.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_QualityIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_seq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Des.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_Alignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_features.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SwissProt.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Medline/pubmed_result1.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Medline/pubmed_result2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q13454.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q13639.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P0A186.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/F2CXE6.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/UniRef90_P99999.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/uni002 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P0CK95.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P16235.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P97881.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/F2CXE6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/uni001 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp013 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.rdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/R5HY77.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P84001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/uni003 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q13639.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q7Z739.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp012 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/keywlist2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/O95832.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P60904.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P68308.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P39896.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp016 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P62258.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp015 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P60137.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/keywlist.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.list -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/H2CNN8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/H2CNN8.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/O23729.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P04439.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_parse_pdb_header.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_sam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/pars3.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/strict_refs.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/msa.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/adam_refs.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/nj.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/consensus_refs.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/upgma.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/neighbor_trees.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/majority_ref.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/test.log -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/nj_min.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer2_text_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PAML_yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PAML_baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/dir.hie.scop.txt_test -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/raftest.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/testDom.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/dir.des.scop.txt_test -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/dir.cla.scop.txt_test -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/.coveragerc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_alphafold_db.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_NeXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_LogisticRegression.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_domtab_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GraphicsGeneral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_interproscan_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Tutorial.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Blast_Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_tab_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_domtab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqRecord.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Cla.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_exonerate_vulgar_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Seq_objs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignInfo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PhyloXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_CAPS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_HMMCasino.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_prodoc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Emboss.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_FragmentMapper.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Insdc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Prank_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/msaprobs.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/msaprobs.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/probcons.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/clustalw.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/promals3d.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/temp horses.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/clustalw.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/hedgehog.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/opuntia.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/probcons.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/odd_consensus.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/clustalw.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/kalign.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/kalign.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/protein.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/msaprobs.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/muscle.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/muscle.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/probcons.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/muscle.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/kalign.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NMR
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NMR/out_example.xpk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NMR
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NMR/noed.xpk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NMR
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_SASA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_ClustalIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_MySQLdb_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/out.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NCBI_qblast.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_UniprotIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BWA/human_g1k_v37_truncated.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BWA/HNSCC1_2_truncated.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BWA/HNSCC1_1_truncated.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_fasta_m10.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_SnapGene.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PSEA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_sqlite3.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_msf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_clustal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Blast_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Dice.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_fasta.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/bac_find.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle_nobrief_multiple.pair -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse4.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/emboss_pair_aln_full_blank_line.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle_overhang.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/matcher_simple.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/NirK_full.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/NirK.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle_asis.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/cds_forward.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/no_oligo.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/internal_oligo.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/alignret.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/bac_find.psearch -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse3.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/matcher_pair.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/cds_reverse.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/short.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Entrez.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd_solexa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd2 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd_454 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqFeature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/phyloxml_examples.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/bcl_2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/o_tol_332_d_dollo.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/made_up.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/distribution.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/apaf.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/journals.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/nucleotide1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/efetch_pmc.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/efetch_schemas.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/nucleotide2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/taxonomy.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/biosample.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/protein.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/egquery2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/epost2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/epost1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary9.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/epost3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/egquery1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed3.html -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/ncbi_mim.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/espell.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_mysql_connector.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_codonalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/seq_tests_common.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PopGen_GenePop_nodepend.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Xdna.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_005.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_hmmsearch_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b1_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_010.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_20_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_008.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_21_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_005.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_31b1_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_22_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_31b1_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_011.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_31b1_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_22_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_31b1_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_24_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_phmmer_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b1_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_006.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_007.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_009.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Ace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/tmpdirprankmsaedZr51
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Clustalw_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/bamii.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/foki.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/cac81.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/crei.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/pvuii.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/bamii.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/foki.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/taqi.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/pvuii.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/crei.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/taqi.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_kNN.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/CDAO
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_raxml_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_long_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_diff_ids.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_plus.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_del.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_at_plus.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example_dos.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.qual -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_no_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_original_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_title.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_93.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_double_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_escape.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_faked.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_example.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_at_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_faked.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_seq.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_spaces.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fastq.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example_dos.fastq.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_tab.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fastq.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_null.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_original_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/zero_length.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/tricky.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_at_seq.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_tabs.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_unit_sep.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_short_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_vtab.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_space.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_double_seq.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_faked.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_text_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Chi2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Gck
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqUtils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/fake.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/3100.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/310.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/A6_1-DB3.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/no_smpl1.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/nonascii_encoding.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/empty.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Abi/3730.ab1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Abi
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GraphicsChromosome.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hhsuite2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_MauveIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Compass/comtest2 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Compass
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_RCSBFormats.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_mysql_connector_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_PdbIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_DSSP.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/output.best.fas -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/random.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/six.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/horses.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/interlaced2.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/five.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/hennigian.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/three.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/sequential.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/four.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/reference_dna.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/horses.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/two.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/one.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/interlaced.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/reference_dna2.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/sequential2.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_phyml_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise_alignment_map.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_exonerate_text_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Muscle_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_SeqXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Affy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_AbiIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/InterProScan
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/BioSeqDatabase.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/Loader.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/BioSeq.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/BioSeqDatabase.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/BioSeq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/Loader.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/DBUtils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/other_trees.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/tree1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_searchio.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_bibliography.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_phenotype.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_seq_annot.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_seq_objects.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_pairwise.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_appendix.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_phylo.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_kegg.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_pdb.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_testing.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_entrez.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/index.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_cookbook.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_graphics.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_cluster.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_motifs.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_seqio.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_pairwise2.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/PF05371_seed.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ls_orchid.gbk.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ls_orchid.gbk.bz2 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/clustal_run.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/nmr
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/nmr/noed.xpk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/nmr
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Dialign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Probcons.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Clustalw.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Prank.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Mafft.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_TCoffee.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/maf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bigpsl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/msf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/AlignInfo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/clustal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/fasta.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_codonaligner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/hhr.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bigbed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/analysis.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/sam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/GENETIC -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/DAYHOFF -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM50 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM90 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/PAM30 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/PAM70 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/RAO -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM62 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BENNER74 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/MDM78 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/RISLER -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/JOHNSON -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLASTN -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/NUC.4.4 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/GONNET1992 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/LEVIN -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLASTP -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BENNER22 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/MCLACHLAN -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM80 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/SCHNEIDER -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM45 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/FENG -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/MEGABLAST -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BENNER6 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/PAM250 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/JONES -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/LargeFileParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/EasyController.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/QualityIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/XdnaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/AbiIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/TabIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/GckIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/PhdIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/GckIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/AbiIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/XdnaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Residue.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PDBMLParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PSEA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Atom.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureAlignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/archivecustom-classes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/HomoloGene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/math.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_180601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/format.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isogrk2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamso.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eSpell.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esummary_clinvar.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-funding1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/ePost_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mmlextra.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esearch.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/default-mixes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamsa.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isobox.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/xhtml-table-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-common1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathmlsetup.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/SP_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-display1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/common.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isomfrk.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PIR_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-link1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/para.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PRF_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/xmlspecchars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Features.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/BITS-question-answer2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/elink_020122.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isocyr1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-para1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isocyr2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PDB_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_180101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/einfo.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isotech.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eSearch_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isogrk3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/egquery.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/taxon.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/chars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/XHTMLtablesetup.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_020114.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esummary-v1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isomopf.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/IUPACData.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/CodonTable.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/CodonTable.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/IUPACData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/PDBData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.py to test_SearchIO_hmmer3_tab_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Probcons_tool.py to test_Probcons_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Enzyme.py to test_Enzyme.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_maf.py to test_Align_maf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_PhylipIO.py to test_AlignIO_PhylipIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBList.py to test_PDB_PDBList.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/gen_results.py to gen_results.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_convert.py to test_AlignIO_convert.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_SMCRA.py to test_PDB_SMCRA.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO.py to test_AlignIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_CodonTable.py to test_CodonTable.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Compass.py to test_Compass.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Pathway.py to test_Pathway.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blat_psl_index.py to test_SearchIO_blat_psl_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Mafft_tool.py to test_Mafft_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Entrez_parser.py to test_Entrez_parser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_psycopg2_online.py to test_BioSQL_psycopg2_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ClustalOmega_tool.py to test_ClustalOmega_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_FastaIO.py to test_AlignIO_FastaIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Application.py to test_Application.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_tabular.py to test_Align_tabular.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_samtools_tool.py to test_samtools_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ExPASy.py to test_ExPASy.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Scop.py to test_SCOP_Scop.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SVDSuperimposer.py to test_SVDSuperimposer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Superimposer.py to test_PDB_Superimposer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBMLParser.py to test_PDB_PDBMLParser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise2_no_C.py to test_pairwise2_no_C.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_TwoBitIO.py to test_SeqIO_TwoBitIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Gfa.py to test_SeqIO_Gfa.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_hhr.py to test_Align_hhr.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Hie.py to test_SCOP_Hie.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_prosite.py to test_prosite.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBParser.py to test_PDB_PDBParser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KEGG.py to test_KEGG.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/common_BioSQL_online.py to common_BioSQL_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bed.py to test_Align_bed.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_UniProt.py to test_UniProt.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_MarkovModel.py to test_MarkovModel.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_MMCIFParser.py to test_PDB_MMCIFParser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_align_substitution_matrices.py to test_align_substitution_matrices.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_SffIO.py to test_SeqIO_SffIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_fasta_m10_index.py to test_SearchIO_fasta_m10_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_CEAligner.py to test_PDB_CEAligner.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_tab.py to test_SearchIO_blast_tab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Raf.py to test_SCOP_Raf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bigbed.py to test_Align_bigbed.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_xml.py to test_SearchIO_blast_xml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Dialign_tool.py to test_Dialign_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Fasttree_tool.py to test_Fasttree_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_xml_index.py to test_SearchIO_blast_xml_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_sqlite3_online.py to test_BioSQL_sqlite3_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bigmaf.py to test_Align_bigmaf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_cellosaurus.py to test_cellosaurus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_emboss.py to test_Align_emboss.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NCBI_BLAST_tools.py to test_NCBI_BLAST_tools.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KEGG_online.py to test_KEGG_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Astral.py to test_SCOP_Astral.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_QCPSuperimposer.py to test_PDB_QCPSuperimposer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_translate.py to test_translate.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Entrez_online.py to test_Entrez_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer2_text.py to test_SearchIO_hmmer2_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_binary_cif.py to test_PDB_binary_cif.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ProtParam.py to test_ProtParam.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PAML_codeml.py to test_PAML_codeml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_EMBL_unittest.py to test_EMBL_unittest.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBIO.py to test_PDB_PDBIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Dom.py to test_SCOP_Dom.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Exposure.py to test_PDB_Exposure.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_psl.py to test_Align_psl.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_codonalign.py to test_Align_codonalign.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_model.py to test_SearchIO_model.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KGML_graphics_online.py to test_KGML_graphics_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_NACCESS.py to test_PDB_NACCESS.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_vectors.py to test_PDB_vectors.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NCBIXML.py to test_NCBIXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_networkx.py to test_Phylo_networkx.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_KDTree.py to test_PDB_KDTree.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/pairwise2_testCases.py to pairwise2_testCases.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PQR.py to test_PQR.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Consensus.py to test_Consensus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ColorSpiral.py to test_ColorSpiral.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO.py to test_SeqIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_CDAO.py to test_Phylo_CDAO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_MMCIFIO.py to test_PDB_MMCIFIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KeyWList.py to test_KeyWList.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_a2m.py to test_Align_a2m.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_UniProt_GOA.py to test_UniProt_GOA.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_internal_coords.py to test_PDB_internal_coords.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_motifs_online.py to test_motifs_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_File.py to test_File.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/search_tests_common.py to search_tests_common.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/common_BioSQL.py to common_BioSQL.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BWA_tool.py to test_BWA_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/run_tests.py to run_tests.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Medline.py to test_Medline.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Cluster.py to test_Cluster.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_MMCIF2Dict.py to test_PDB_MMCIF2Dict.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_phenotype_fit.py to test_phenotype_fit.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_write.py to test_SearchIO_write.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GraphicsDistribution.py to test_GraphicsDistribution.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_matplotlib.py to test_Phylo_matplotlib.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_align.py to test_align.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Selection.py to test_PDB_Selection.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise2.py to test_pairwise2.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo.py to test_Phylo.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blat_psl.py to test_SearchIO_blat_psl.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Residues.py to test_SCOP_Residues.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bigpsl.py to test_Align_bigpsl.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_EmbossIO.py to test_AlignIO_EmbossIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_StructureAlignment.py to test_PDB_StructureAlignment.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_geo.py to test_geo.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_motifs.py to test_motifs.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GenBank.py to test_GenBank.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Restriction.py to test_Restriction.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_igraph.py to test_Phylo_igraph.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_exonerate.py to test_SearchIO_exonerate.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_NibIO.py to test_SeqIO_NibIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_TCoffee_tool.py to test_TCoffee_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GenomeDiagram.py to test_GenomeDiagram.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Nexus.py to test_Nexus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_HMMGeneral.py to test_HMMGeneral.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_phenotype.py to test_phenotype.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Disordered.py to test_PDB_Disordered.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KGML_nographics.py to test_KGML_nographics.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Gck.py to test_SeqIO_Gck.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NaiveBayes.py to test_NaiveBayes.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_bgzf.py to test_bgzf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NMR.py to test_NMR.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_stockholm.py to test_Align_stockholm.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_UniGene.py to test_UniGene.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_TogoWS.py to test_TogoWS.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_phylip.py to test_Align_phylip.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_TreeConstruction.py to test_TreeConstruction.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_mauve.py to test_Align_mauve.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_EmbossPrimer.py to test_EmbossPrimer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise_aligner.py to test_pairwise_aligner.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KGML_graphics.py to test_KGML_graphics.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Polypeptide.py to test_PDB_Polypeptide.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_FastaIO.py to test_SeqIO_FastaIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_QualityIO.py to test_SeqIO_QualityIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_seq.py to test_seq.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Des.py to test_SCOP_Des.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_text.py to test_SearchIO_hmmer3_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_Alignment.py to test_Align_Alignment.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_chain.py to test_Align_chain.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_features.py to test_SeqIO_features.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SwissProt.py to test_SwissProt.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_parse_pdb_header.py to test_PDB_parse_pdb_header.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_sam.py to test_Align_sam.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer2_text_index.py to test_SearchIO_hmmer2_text_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PAML_yn00.py to test_PAML_yn00.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PAML_baseml.py to test_PAML_baseml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_alphafold_db.py to test_PDB_alphafold_db.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_NeXML.py to test_Phylo_NeXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_LogisticRegression.py to test_LogisticRegression.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py to test_SearchIO_hmmer3_domtab_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GraphicsGeneral.py to test_GraphicsGeneral.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_interproscan_xml.py to test_SearchIO_interproscan_xml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Tutorial.py to test_Tutorial.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Blast_Record.py to test_Blast_Record.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_tab_index.py to test_SearchIO_blast_tab_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_domtab.py to test_SearchIO_hmmer3_domtab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqRecord.py to test_SeqRecord.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Cla.py to test_SCOP_Cla.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py to test_SearchIO_exonerate_vulgar_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Seq_objs.py to test_Seq_objs.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignInfo.py to test_AlignInfo.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PhyloXML.py to test_PhyloXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_CAPS.py to test_CAPS.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_HMMCasino.py to test_HMMCasino.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_prodoc.py to test_prodoc.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Emboss.py to test_Emboss.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_FragmentMapper.py to test_PDB_FragmentMapper.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Insdc.py to test_SeqIO_Insdc.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Prank_tool.py to test_Prank_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_nexus.py to test_Align_nexus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_SASA.py to test_PDB_SASA.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_ClustalIO.py to test_AlignIO_ClustalIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_MySQLdb_online.py to test_BioSQL_MySQLdb_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NCBI_qblast.py to test_NCBI_qblast.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_UniprotIO.py to test_SeqIO_UniprotIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_fasta_m10.py to test_SearchIO_fasta_m10.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_SnapGene.py to test_SeqIO_SnapGene.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_online.py to test_SeqIO_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PSEA.py to test_PDB_PSEA.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_sqlite3.py to test_BioSQL_sqlite3.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_msf.py to test_Align_msf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_clustal.py to test_Align_clustal.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Blast_parser.py to test_Blast_parser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Dice.py to test_PDB_Dice.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_fasta.py to test_Align_fasta.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Entrez.py to test_Entrez.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqFeature.py to test_SeqFeature.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_exonerate.py to test_Align_exonerate.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_tab.py to test_SearchIO_hmmer3_tab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_mysql_connector.py to test_BioSQL_mysql_connector.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_codonalign.py to test_codonalign.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/seq_tests_common.py to seq_tests_common.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PopGen_GenePop_nodepend.py to test_PopGen_GenePop_nodepend.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Xdna.py to test_SeqIO_Xdna.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Ace.py to test_Ace.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_index.py to test_SeqIO_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Clustalw_tool.py to test_Clustalw_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_kNN.py to test_kNN.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_raxml_tool.py to test_raxml_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py to test_SearchIO_hmmer3_text_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Chi2.py to test_Chi2.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqUtils.py to test_SeqUtils.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_write.py to test_SeqIO_write.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phd.py to test_Phd.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GraphicsChromosome.py to test_GraphicsChromosome.cpython-313.pyc
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byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/ic_data.py to ic_data.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Model.py to Model.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/internal_coords.py to internal_coords.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/cealign.py to cealign.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Selection.py to Selection.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Phd.py to Phd.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Ace.py to Ace.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Medline/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt/KeyWList.py to KeyWList.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/chi2.py to chi2.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/codeml.py to codeml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/yn00.py to yn00.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_paml.py to _paml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/baseml.py to baseml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NeXML.py to NeXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/CDAOIO.py to CDAOIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Newick.py to Newick.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/_utils.py to _utils.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Consensus.py to Consensus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NexusIO.py to NexusIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/CDAO.py to CDAO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NewickIO.py to NewickIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PhyloXML.py to PhyloXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/_io.py to _io.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/BaseTree.py to BaseTree.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Cla.py to Cla.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Dom.py to Dom.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Raf.py to Raf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Residues.py to Residues.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Hie.py to Hie.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Des.py to Des.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/cellosaurus.py to cellosaurus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/Prosite.py to Prosite.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/Enzyme.py to Enzyme.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/Prodoc.py to Prodoc.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/NOEtools.py to NOEtools.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/xpktools.py to xpktools.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NaiveBayes.py to NaiveBayes.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/pairwise2.py to pairwise2.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/Primer3.py to Primer3.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/Applications.py to Applications.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py to hhsuite2_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/hsp.py to hsp.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/_base.py to _base.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/query.py to query.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/hit.py to hit.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_utils.py to _utils.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_index.py to _index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlatIO.py to BlatIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/_base.py to _base.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/FastaIO.py to FastaIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py to interproscan_xml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/Parser.py to Parser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/CAPS/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/bgzf.py to bgzf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Application/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Compass/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqRecord.py to SeqRecord.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/LogisticRegression.py to LogisticRegression.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/Utilities.py to Utilities.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/MarkovModel.py to MarkovModel.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/Trainer.py to Trainer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/CodonTable.py to CodonTable.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/IUPACData.py to IUPACData.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/PDBData.py to PDBData.cpython-313.pyc
running install_egg_info
Copying biopython.egg-info to /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/biopython-1.85.egg-info
Skipping SOURCES.txt
running install_scripts
dh_numpy3 -ppython3-biopython
Possible precedence issue with control flow operator (return) at /usr/bin/dh_numpy3 line 57.
Can't stat debian/python3-biopython: No such file or directory
at /usr/bin/dh_numpy3 line 85.
dh_numpy3: warning: skipping binary package python3-biopython which does not depend on the NumPy C ABI
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_install -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython//usr/lib/python3.13/dist-packages
cp --reflink=auto -a debian/tmp/usr/lib/python3.13/dist-packages/Bio debian/tmp/usr/lib/python3.13/dist-packages/biopython-1.85.egg-info debian/python3-biopython//usr/lib/python3.13/dist-packages/
install -m0755 -d debian/python3-biopython-sql//usr/lib/python3.13/dist-packages
cp --reflink=auto -a debian/tmp/usr/lib/python3.13/dist-packages/BioSQL debian/python3-biopython-sql//usr/lib/python3.13/dist-packages/
rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log
debian/rules override_dh_installdocs-indep
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_installdocs -i
dh_installdocs: warning: Cannot auto-detect main package for python-biopython-doc. If the default is wrong, please use --doc-main-package
install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc
install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc
cd './Doc/_build/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc
cp --reflink=auto -a ./debian/README.test debian/python-biopython-doc/usr/share/doc/python-biopython-doc
cp --reflink=auto -a ./debian/tests/run-unit-test debian/python-biopython-doc/usr/share/doc/python-biopython-doc
cd './debian/Tests_fixme/..' && find 'Tests_fixme' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc
chmod -R u\+rw,go=rX debian/python-biopython-doc/usr/share/doc
install -p -m0644 debian/copyright debian/python-biopython-doc/usr/share/doc/python-biopython-doc/copyright
install -m0755 -d debian/python-biopython-doc/usr/share/doc-base/
install -p -m0644 debian/python-biopython-doc.doc-base debian/python-biopython-doc/usr/share/doc-base/python-biopython-doc.biopython-tutorial
install -m0755 -d debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql
install -p -m0644 debian/copyright debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/copyright
find debian -name __pycache__ -type d | xargs rm -rf
# dh_installdocs seems to refuse copying zero length files (for
# instance Tests/Blast/tab_2226_tblastn_002.txt) but these are
# needed for the tests as well
cp -a debian/tmp_tests/* /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc
# Tackle privacy breaches caused by MathML.
sed -i 's@https://cdn.jsdelivr.net/npm/mathjax\@3/es5/tex-mml-chtml.js@file:///usr/share/nodejs/mathjax-full/es5/tex-mml-chtml.js@' \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/Tutorial/*.html \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/index.html
# Clean fonts that made their way to the documentation package.
rm -rvf /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Bold.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-BoldItalic.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.svg'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Regular.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/RobotoSlab-Regular.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/RobotoSlab-Bold.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Italic.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Regular.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.eot'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Italic.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.woff'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-BoldItalic.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Bold.woff2'
removed directory '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/'
# Use Debian provided Javascript files.
rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js'
ln -sv /usr/share/javascript/jquery/jquery.js \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js
'/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js' -> '/usr/share/javascript/jquery/jquery.js'
rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js'
ln -sv /usr/share/javascript/sphinxdoc/1.0/doctools.js \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js
'/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js' -> '/usr/share/javascript/sphinxdoc/1.0/doctools.js'
rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js'
ln -sv /usr/share/javascript/sphinxdoc/1.0/language_data.js \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js
'/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js' -> '/usr/share/javascript/sphinxdoc/1.0/language_data.js'
rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js'
ln -sv /usr/share/javascript/sphinxdoc/1.0/searchtools.js \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js
'/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js' -> '/usr/share/javascript/sphinxdoc/1.0/searchtools.js'
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_installdocs -O--buildsystem=pybuild -Npython-biopython-doc -Npython3-biopython-sql
install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython
install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython
cp --reflink=auto -a ./CONTRIB.rst debian/python3-biopython/usr/share/doc/python3-biopython
cp --reflink=auto -a ./CONTRIBUTING.rst debian/python3-biopython/usr/share/doc/python3-biopython
cp --reflink=auto -a ./DEPRECATED.rst debian/python3-biopython/usr/share/doc/python3-biopython
cp --reflink=auto -a ./NEWS.rst debian/python3-biopython/usr/share/doc/python3-biopython
chmod -R u\+rw,go=rX debian/python3-biopython/usr/share/doc
install -p -m0644 debian/README.Debian debian/python3-biopython/usr/share/doc/python3-biopython/README.Debian
install -p -m0644 debian/TODO debian/python3-biopython/usr/share/doc/python3-biopython/TODO.Debian
install -p -m0644 debian/copyright debian/python3-biopython/usr/share/doc/python3-biopython/copyright
dh_installchangelogs -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql
install -p -m0644 debian/.debhelper/generated/python3-biopython-sql/dh_installchangelogs.dch.trimmed debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/changelog.Debian
install -p -m0644 debian/.debhelper/generated/python3-biopython-sql/dh_installchangelogs.news.trimmed debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/NEWS.Debian
install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc
install -p -m0644 debian/.debhelper/generated/python-biopython-doc/dh_installchangelogs.dch.trimmed debian/python-biopython-doc/usr/share/doc/python-biopython-doc/changelog.Debian
install -p -m0644 debian/.debhelper/generated/python-biopython-doc/dh_installchangelogs.news.trimmed debian/python-biopython-doc/usr/share/doc/python-biopython-doc/NEWS.Debian
install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython
install -p -m0644 debian/.debhelper/generated/python3-biopython/dh_installchangelogs.dch.trimmed debian/python3-biopython/usr/share/doc/python3-biopython/changelog.Debian
install -p -m0644 debian/.debhelper/generated/python3-biopython/dh_installchangelogs.news.trimmed debian/python3-biopython/usr/share/doc/python3-biopython/NEWS.Debian
dh_installexamples -O--buildsystem=pybuild
dh_installexamples: warning: Cannot auto-detect main package for python-biopython-doc. If the default is wrong, please use --doc-main-package
install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ACT_example.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/alpha.faa debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/beta.faa debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/clustal_run.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ec_5.4.2.2.txt debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/fasta_dictionary.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/fasta_iterator.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.fasta debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk.bgz debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk.bz2 debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk.gz debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/m_cold.fasta debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/my_blast.xml debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/my_blat.psl debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/nmr debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/opuntia.aln debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/opuntia.dnd debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/opuntia.fasta debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/PF05371_seed.sth debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/Plates.csv debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/Proux_et_al_2002_Figure_6.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/simple.dnd debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/swissprot.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/www_blast.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
dh_python3 -O--buildsystem=pybuild
D: dh_python3 dh_python3:180: version: 6.20250108
D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild']
D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild'])
D: dh_python3 dh_python3:183: supported Python versions: 3.13 (default=3.13)
D: dh_python3 debhelper:166: skipping package python-biopython-doc (missing ${python3:Depends} in Depends/Recommends)
D: dh_python3 debhelper:174: source=python-biopython, binary packages=['python3-biopython', 'python3-biopython-sql']
D: dh_python3 dh_python3:205: processing package python3-biopython...
D: dh_python3 fs:50: moving files from debian/python3-biopython/usr/lib/python3.13/dist-packages to debian/python3-biopython/usr/lib/python3/dist-packages/
D: dh_python3 fs:338: package python3-biopython details = {'requires.txt': {'debian/python3-biopython/usr/lib/python3/dist-packages/biopython-1.85.egg-info/requires.txt'}, 'egg-info': {'debian/python3-biopython/usr/lib/python3/dist-packages/biopython-1.85.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.13')}, 'ext_no_version': set()}
D: dh_python3 depends:103: generating dependencies for package python3-biopython
D: dh_python3 pydist:175: trying to find dependency for numpy (python=None)
D: dh_python3 pydist:209: dependency: module seems to be installed
D: dh_python3 pydist:284: dependency: included in build-deps
D: dh_python3 depends:253: D={'python3 (>= 3.13~)', 'python3 (<< 3.14)', 'python3-numpy', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[]
D: dh_python3 dh_python3:205: processing package python3-biopython-sql...
D: dh_python3 fs:50: moving files from debian/python3-biopython-sql/usr/lib/python3.13/dist-packages to debian/python3-biopython-sql/usr/lib/python3/dist-packages/
D: dh_python3 fs:338: package python3-biopython-sql details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()}
D: dh_python3 depends:103: generating dependencies for package python3-biopython-sql
D: dh_python3 depends:253: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[]
dh_installsystemduser -O--buildsystem=pybuild
dh_lintian -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/usr/share/lintian/overrides
install -p -m0644 debian/python3-biopython.lintian-overrides debian/python3-biopython/usr/share/lintian/overrides/python3-biopython
install -m0755 -d debian/python-biopython-doc/usr/share/lintian/overrides
install -p -m0644 debian/python-biopython-doc.lintian-overrides debian/python-biopython-doc/usr/share/lintian/overrides/python-biopython-doc
dh_perl -O--buildsystem=pybuild
dh_link -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs
rm -f debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd
ln -s ../../../../../../share/xml/w3c-sgml-lib/schema/dtd/XX-MathML2-20031104/mathml2.dtd debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd
rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js
ln -s ../../../../javascript/jquery/jquery.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js
rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js
ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js
rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js
ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js
rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js
ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js
dh_strip_nondeterminism -O--buildsystem=pybuild
Using 1738853069 as canonical time
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/file.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/minus.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/1a8o-ca-plot.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/plasmid_circular_nice.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/dot_plot.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/GD_sigils.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/KEGG/map01100.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/KEGG/map03070.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/three_track_cl2a.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/tRNA_chrom.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/gc_plot.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/biopython_logo_m.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/phe-pairs-3pbl.png using File::StripNondeterminism::handlers::png
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Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/Tests/Fasta/flowers.pro.gz using File::StripNondeterminism::handlers::gzip
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dh_compress -O--buildsystem=pybuild
cd debian/python3-biopython
cd debian/python-biopython-doc
cd debian/python3-biopython-sql
chmod a-x usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian
chmod a-x usr/share/doc/python3-biopython-sql/NEWS.Debian usr/share/doc/python3-biopython-sql/changelog.Debian
gzip -9nf usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian
gzip -9nf usr/share/doc/python3-biopython-sql/NEWS.Debian usr/share/doc/python3-biopython-sql/changelog.Debian
cd '/build/reproducible-path/python-biopython-1.85+dfsg'
cd '/build/reproducible-path/python-biopython-1.85+dfsg'
chmod a-x usr/share/doc/python-biopython-doc/NEWS.Debian usr/share/doc/python-biopython-doc/Tests/Abi/310.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3100.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3730.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/A6_1-DB3.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/empty.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/no_smpl1.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/nonascii_encoding.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/test.fsa usr/share/doc/python-biopython-doc/Tests/Abi/test_data usr/share/doc/python-biopython-doc/Tests/Ace/consed_sample.ace usr/share/doc/python-biopython-doc/Tests/Ace/contig1.ace usr/share/doc/python-biopython-doc/Tests/Ace/seq.cap.ace usr/share/doc/python-biopython-doc/Tests/Align/cow.fa usr/share/doc/python-biopython-doc/Tests/Align/hg38.chrom.sizes usr/share/doc/python-biopython-doc/Tests/Align/pig.fa usr/share/doc/python-biopython-doc/Tests/BWA/HNSCC1_1_truncated.fastq 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gzip -9nf usr/share/doc/python-biopython-doc/Tests/test_Blast_parser.py usr/share/doc/python-biopython-doc/Tests/test_CAPS.py usr/share/doc/python-biopython-doc/Tests/test_ClustalOmega_tool.py usr/share/doc/python-biopython-doc/Tests/test_Clustalw_tool.py usr/share/doc/python-biopython-doc/Tests/test_Cluster.py usr/share/doc/python-biopython-doc/Tests/test_CodonTable.py usr/share/doc/python-biopython-doc/Tests/test_ColorSpiral.py usr/share/doc/python-biopython-doc/Tests/test_Consensus.py usr/share/doc/python-biopython-doc/Tests/test_Dialign_tool.py usr/share/doc/python-biopython-doc/Tests/test_Emboss.py usr/share/doc/python-biopython-doc/Tests/test_EmbossPrimer.py usr/share/doc/python-biopython-doc/Tests/test_Entrez.py usr/share/doc/python-biopython-doc/Tests/test_Entrez_online.py usr/share/doc/python-biopython-doc/Tests/test_Entrez_parser.py usr/share/doc/python-biopython-doc/Tests/test_Enzyme.py usr/share/doc/python-biopython-doc/Tests/test_Fasttree_tool.py 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usr/share/doc/python-biopython-doc/changelog.Debian
cd '/build/reproducible-path/python-biopython-1.85+dfsg'
rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log
debian/rules override_dh_fixperms
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_fixperms
find debian/python3-biopython ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python-biopython-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python3-biopython-sql ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python3-biopython-sql/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython-sql/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython-sql/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python3-biopython/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython-sql -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python3-biopython-sql/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian/python-biopython-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biopython-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian/python-biopython-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python-biopython-doc/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python-biopython-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian -name "*.dtd" -exec chmod -x \{\} \;
chmod: cannot operate on dangling symlink 'debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd'
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_missing -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu
dwz -mdebian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug -- debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so
objcopy --compress-debug-sections debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug
chmod 0644 -- debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug
dh_strip -a -O--buildsystem=pybuild
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/bf0f167132b8d542ccf9bc2e3c17dfb77030a9.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/bf0f167132b8d542ccf9bc2e3c17dfb77030a9.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/bf0f167132b8d542ccf9bc2e3c17dfb77030a9.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0b
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0b/824aafb0f7abc96dad45a12e5d22fbd2d5b8dc.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0b/824aafb0f7abc96dad45a12e5d22fbd2d5b8dc.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0b/824aafb0f7abc96dad45a12e5d22fbd2d5b8dc.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/69d17deb1b17ad018c2a36ad9bc72ef7955da7.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/69d17deb1b17ad018c2a36ad9bc72ef7955da7.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/69d17deb1b17ad018c2a36ad9bc72ef7955da7.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bd
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bd/d3ee90e8e7210b86998bec239310c13d727b57.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bd/d3ee90e8e7210b86998bec239310c13d727b57.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bd/d3ee90e8e7210b86998bec239310c13d727b57.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ca
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ca/9ab834ef79752b37ed7343a36a1c19b78b2b86.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ca/9ab834ef79752b37ed7343a36a1c19b78b2b86.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ca/9ab834ef79752b37ed7343a36a1c19b78b2b86.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/7e
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/7e/b58f33de838fdb083e46d6e8d6f1f5d77f6ab5.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/7e/b58f33de838fdb083e46d6e8d6f1f5d77f6ab5.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/7e/b58f33de838fdb083e46d6e8d6f1f5d77f6ab5.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/b6d680850259b8cf3cb7658552bbfbf8e65335.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/b6d680850259b8cf3cb7658552bbfbf8e65335.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/b6d680850259b8cf3cb7658552bbfbf8e65335.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/5a
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/5a/d294f1653b8bd9941cde9a9db7b85323d6e1a1.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/5a/d294f1653b8bd9941cde9a9db7b85323d6e1a1.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/5a/d294f1653b8bd9941cde9a9db7b85323d6e1a1.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8e
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8e/4659d63064e8d015ba678f7ee4e1f71c6dc5ca.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8e/4659d63064e8d015ba678f7ee4e1f71c6dc5ca.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8e/4659d63064e8d015ba678f7ee4e1f71c6dc5ca.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ed
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ed/32f9799898593049253f082736071d9df8dee9.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ed/32f9799898593049253f082736071d9df8dee9.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ed/32f9799898593049253f082736071d9df8dee9.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/a3
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/a3/0ac2f11d9e5546e3499dbf8e90360739145546.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/a3/0ac2f11d9e5546e3499dbf8e90360739145546.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/a3/0ac2f11d9e5546e3499dbf8e90360739145546.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz
cp --reflink=auto -a debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz
rm -fr debian/python3-biopython/usr/lib/debug/.dwz
rmdir -p --ignore-fail-on-non-empty debian/python3-biopython/usr/lib/debug
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc
ln -s python3-biopython debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc/python3-biopython-dbgsym
install -m0755 -d debian/.debhelper/python3-biopython
dh_makeshlibs -a -O--buildsystem=pybuild
rm -f debian/python3-biopython/DEBIAN/shlibs
dh_shlibdeps -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/DEBIAN
dpkg-shlibdeps -Tdebian/python3-biopython.substvars debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so
dh_installdeb -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/DEBIAN
printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/postinst
cat debian/python3-biopython.postinst.debhelper >> debian/python3-biopython/DEBIAN/postinst
chmod 0755 -- debian/python3-biopython/DEBIAN/postinst
printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/prerm
cat debian/python3-biopython.prerm.debhelper >> debian/python3-biopython/DEBIAN/prerm
chmod 0755 -- debian/python3-biopython/DEBIAN/prerm
install -m0755 -d debian/python-biopython-doc/DEBIAN
install -m0755 -d debian/python3-biopython-sql/DEBIAN
printf '#!/bin/sh\nset -e\n' > debian/python3-biopython-sql/DEBIAN/postinst
cat debian/python3-biopython-sql.postinst.debhelper >> debian/python3-biopython-sql/DEBIAN/postinst
chmod 0755 -- debian/python3-biopython-sql/DEBIAN/postinst
printf '#!/bin/sh\nset -e\n' > debian/python3-biopython-sql/DEBIAN/prerm
cat debian/python3-biopython-sql.prerm.debhelper >> debian/python3-biopython-sql/DEBIAN/prerm
chmod 0755 -- debian/python3-biopython-sql/DEBIAN/prerm
dh_gencontrol -O--buildsystem=pybuild
install -m0755 -d debian/python-biopython-doc/DEBIAN
echo misc:Depends= >> debian/python-biopython-doc.substvars
echo misc:Pre-Depends= >> debian/python-biopython-doc.substvars
dpkg-gencontrol -ppython-biopython-doc -ldebian/changelog -Tdebian/python-biopython-doc.substvars -cdebian/control -Pdebian/python-biopython-doc
install -m0755 -d debian/python3-biopython/DEBIAN
echo misc:Depends= >> debian/python3-biopython.substvars
echo misc:Pre-Depends= >> debian/python3-biopython.substvars
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN
dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -cdebian/control -Pdebian/.debhelper/python3-biopython/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-biopython-dbgsym "-DDepends=python3-biopython (= \${binary:Version})" "-DDescription=debug symbols for python3-biopython" "-DBuild-Ids=0b824aafb0f7abc96dad45a12e5d22fbd2d5b8dc 31bf0f167132b8d542ccf9bc2e3c17dfb77030a9 5ad294f1653b8bd9941cde9a9db7b85323d6e1a1 7eb58f33de838fdb083e46d6e8d6f1f5d77f6ab5 8e4659d63064e8d015ba678f7ee4e1f71c6dc5ca a30ac2f11d9e5546e3499dbf8e90360739145546 bdd3ee90e8e7210b86998bec239310c13d727b57 ca9ab834ef79752b37ed7343a36a1c19b78b2b86 e969d17deb1b17ad018c2a36ad9bc72ef7955da7 e9b6d680850259b8cf3cb7658552bbfbf8e65335 ed32f9799898593049253f082736071d9df8dee9" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
install -m0755 -d debian/python3-biopython-sql/DEBIAN
echo misc:Depends= >> debian/python3-biopython-sql.substvars
echo misc:Pre-Depends= >> debian/python3-biopython-sql.substvars
dpkg-gencontrol -ppython3-biopython-sql -ldebian/changelog -Tdebian/python3-biopython-sql.substvars -cdebian/control -Pdebian/python3-biopython-sql
dpkg-gencontrol: warning: Provides field of package python3-biopython-sql: substitution variable ${python3:Provides} used, but is not defined
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control
dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -cdebian/control -Pdebian/python3-biopython
chmod 0644 -- debian/python3-biopython-sql/DEBIAN/control
chmod 0644 -- debian/python-biopython-doc/DEBIAN/control
chmod 0644 -- debian/python3-biopython/DEBIAN/control
dh_md5sums -O--buildsystem=pybuild
install -m0755 -d debian/python-biopython-doc/DEBIAN
install -m0755 -d debian/python3-biopython/DEBIAN
install -m0755 -d debian/python3-biopython-sql/DEBIAN
cd debian/python3-biopython-sql >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
cd debian/python3-biopython >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
cd debian/python-biopython-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/python3-biopython-sql/DEBIAN/md5sums
chmod 0644 -- debian/python3-biopython/DEBIAN/md5sums
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN
cd debian/.debhelper/python3-biopython/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/md5sums
chmod 0644 -- debian/python-biopython-doc/DEBIAN/md5sums
dh_builddeb -O--buildsystem=pybuild
dpkg-deb --root-owner-group --build debian/python3-biopython ..
dpkg-deb --root-owner-group --build debian/.debhelper/python3-biopython/dbgsym-root ..
dpkg-deb --root-owner-group --build debian/python-biopython-doc ..
dpkg-deb --root-owner-group --build debian/python3-biopython-sql ..
dpkg-deb: building package 'python-biopython-doc' in '../python-biopython-doc_1.85+dfsg-2_all.deb'.
dpkg-deb: building package 'python3-biopython-dbgsym' in '../python3-biopython-dbgsym_1.85+dfsg-2_amd64.deb'.
dpkg-deb: building package 'python3-biopython-sql' in '../python3-biopython-sql_1.85+dfsg-2_all.deb'.
dpkg-deb: building package 'python3-biopython' in '../python3-biopython_1.85+dfsg-2_amd64.deb'.
dpkg-genbuildinfo --build=binary -O../python-biopython_1.85+dfsg-2_amd64.buildinfo
dpkg-genchanges --build=binary -O../python-biopython_1.85+dfsg-2_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/2560911 and its subdirectories
I: Current time: Wed Mar 5 05:37:54 -12 2025
I: pbuilder-time-stamp: 1741196274
Wed Mar 5 17:37:55 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net.
Wed Mar 5 17:37:55 UTC 2025 I: Preparing to do remote build '2' on ionos15-amd64.debian.net.
Wed Mar 5 17:53:19 UTC 2025 I: Deleting $TMPDIR on ionos15-amd64.debian.net.
Wed Mar 5 17:53:20 UTC 2025 I: python-biopython_1.85+dfsg-2_amd64.changes:
Format: 1.8
Date: Thu, 06 Feb 2025 15:44:29 +0100
Source: python-biopython
Binary: python-biopython-doc python3-biopython python3-biopython-dbgsym python3-biopython-sql
Architecture: all amd64
Version: 1.85+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <crusoe@debian.org>
Description:
python-biopython-doc - Documentation for the Biopython library
python3-biopython - Python3 library for bioinformatics
python3-biopython-sql - Biopython support for the BioSQL database schema (Python 3)
Closes: 1095105
Changes:
python-biopython (1.85+dfsg-2) unstable; urgency=medium
.
* Skip the Tutorial test on s390x. Closes: #1095105.
Checksums-Sha1:
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6608be1b8346b192f860b502cb97c2a32ce0d731 385204 python3-biopython-dbgsym_1.85+dfsg-2_amd64.deb
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Files:
4228fb554bb6c52e106324df87a25b15 18236196 doc optional python-biopython-doc_1.85+dfsg-2_all.deb
7ef90e9988d220f6b6a8cc667664a609 16858 python optional python-biopython_1.85+dfsg-2_amd64.buildinfo
83622f1390ec06546df9c0c3115ebd0e 385204 debug optional python3-biopython-dbgsym_1.85+dfsg-2_amd64.deb
48253f1ec62da1d1ce43998dd42d6ed5 33284 python optional python3-biopython-sql_1.85+dfsg-2_all.deb
d62d895d790e2d96fa80aef35d3b459a 1672172 python optional python3-biopython_1.85+dfsg-2_amd64.deb
Wed Mar 5 17:53:20 UTC 2025 I: Preparing to do remote build '1' on ionos1-amd64.debian.net.
Wed Mar 5 18:25:44 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Wed Mar 5 05:53:21 -12 2025
I: pbuilder-time-stamp: 1741197201
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [python-biopython_1.85+dfsg-2.dsc]
I: copying [./python-biopython_1.85+dfsg.orig.tar.xz]
I: copying [./python-biopython_1.85+dfsg-2.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./python-biopython_1.85+dfsg-2.dsc: unsupported subcommand
dpkg-source: info: extracting python-biopython in python-biopython-1.85+dfsg
dpkg-source: info: unpacking python-biopython_1.85+dfsg.orig.tar.xz
dpkg-source: info: unpacking python-biopython_1.85+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying remove_mathml-qname.patch
dpkg-source: info: applying privacy_breach.patch
dpkg-source: info: applying privacy_breach_ie9.patch
dpkg-source: info: applying croak-on-muscle5.patch
dpkg-source: info: applying muscle3.patch
dpkg-source: info: applying skip-scipy-in-codonalign.patch
dpkg-source: info: applying fix-type-cast-i386.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/3102991/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='amd64'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 '
DISTRIBUTION='unstable'
HOME='/root'
HOST_ARCH='amd64'
IFS='
'
INVOCATION_ID='5b82b05274044b01a4ef9aed9cd7c928'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='3102991'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.UMO7xJdH/pbuilderrc_wHDw --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.UMO7xJdH/b1 --logfile b1/build.log python-biopython_1.85+dfsg-2.dsc'
SUDO_GID='110'
SUDO_UID='105'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://46.16.76.132:3128'
I: uname -a
Linux ionos1-amd64 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/3102991/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all-dev:native, libpython3-all-dev, python3-numpy, flex, python3-reportlab (>= 4.0.4-1~), hevea, texlive-latex-base, texlive-latex-extra, texlive-fonts-recommended, bwa, clustalo, clustalw, dialign, dssp, emboss, fasttree, mafft, muscle3, ncbi-blast+, phylip, phyml, prank, probcons, python3-networkx, python3-numpydoc, python3-mysqldb, python3-matplotlib, python3-mmtf, python3-pil, python3-rdflib, python3-psycopg2, python3-pygments, python3-igraph, python3-scipy, python3-setuptools, python3-sphinx, python3-sphinx-rtd-theme, raxml, samtools, t-coffee, wise
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19783 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however:
Package dh-sequence-python3 is not installed.
pbuilder-satisfydepends-dummy depends on python3-all-dev:native.
pbuilder-satisfydepends-dummy depends on libpython3-all-dev; however:
Package libpython3-all-dev is not installed.
pbuilder-satisfydepends-dummy depends on python3-numpy; however:
Package python3-numpy is not installed.
pbuilder-satisfydepends-dummy depends on flex; however:
Package flex is not installed.
pbuilder-satisfydepends-dummy depends on python3-reportlab (>= 4.0.4-1~); however:
Package python3-reportlab is not installed.
pbuilder-satisfydepends-dummy depends on hevea; however:
Package hevea is not installed.
pbuilder-satisfydepends-dummy depends on texlive-latex-base; however:
Package texlive-latex-base is not installed.
pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however:
Package texlive-latex-extra is not installed.
pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however:
Package texlive-fonts-recommended is not installed.
pbuilder-satisfydepends-dummy depends on bwa; however:
Package bwa is not installed.
pbuilder-satisfydepends-dummy depends on clustalo; however:
Package clustalo is not installed.
pbuilder-satisfydepends-dummy depends on clustalw; however:
Package clustalw is not installed.
pbuilder-satisfydepends-dummy depends on dialign; however:
Package dialign is not installed.
pbuilder-satisfydepends-dummy depends on dssp; however:
Package dssp is not installed.
pbuilder-satisfydepends-dummy depends on emboss; however:
Package emboss is not installed.
pbuilder-satisfydepends-dummy depends on fasttree; however:
Package fasttree is not installed.
pbuilder-satisfydepends-dummy depends on mafft; however:
Package mafft is not installed.
pbuilder-satisfydepends-dummy depends on muscle3; however:
Package muscle3 is not installed.
pbuilder-satisfydepends-dummy depends on ncbi-blast+; however:
Package ncbi-blast+ is not installed.
pbuilder-satisfydepends-dummy depends on phylip; however:
Package phylip is not installed.
pbuilder-satisfydepends-dummy depends on phyml; however:
Package phyml is not installed.
pbuilder-satisfydepends-dummy depends on prank; however:
Package prank is not installed.
pbuilder-satisfydepends-dummy depends on probcons; however:
Package probcons is not installed.
pbuilder-satisfydepends-dummy depends on python3-networkx; however:
Package python3-networkx is not installed.
pbuilder-satisfydepends-dummy depends on python3-numpydoc; however:
Package python3-numpydoc is not installed.
pbuilder-satisfydepends-dummy depends on python3-mysqldb; however:
Package python3-mysqldb is not installed.
pbuilder-satisfydepends-dummy depends on python3-matplotlib; however:
Package python3-matplotlib is not installed.
pbuilder-satisfydepends-dummy depends on python3-mmtf; however:
Package python3-mmtf is not installed.
pbuilder-satisfydepends-dummy depends on python3-pil; however:
Package python3-pil is not installed.
pbuilder-satisfydepends-dummy depends on python3-rdflib; however:
Package python3-rdflib is not installed.
pbuilder-satisfydepends-dummy depends on python3-psycopg2; however:
Package python3-psycopg2 is not installed.
pbuilder-satisfydepends-dummy depends on python3-pygments; however:
Package python3-pygments is not installed.
pbuilder-satisfydepends-dummy depends on python3-igraph; however:
Package python3-igraph is not installed.
pbuilder-satisfydepends-dummy depends on python3-scipy; however:
Package python3-scipy is not installed.
pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
Package python3-setuptools is not installed.
pbuilder-satisfydepends-dummy depends on python3-sphinx; however:
Package python3-sphinx is not installed.
pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however:
Package python3-sphinx-rtd-theme is not installed.
pbuilder-satisfydepends-dummy depends on raxml; however:
Package raxml is not installed.
pbuilder-satisfydepends-dummy depends on samtools; however:
Package samtools is not installed.
pbuilder-satisfydepends-dummy depends on t-coffee; however:
Package t-coffee is not installed.
pbuilder-satisfydepends-dummy depends on wise; however:
Package wise is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} bwa{a} ca-certificates{a} clustalo{a} clustalw{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dialign{a} docutils-common{a} dssp{a} dwz{a} emboss{a} emboss-data{a} emboss-lib{a} fasttree{a} file{a} flex{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lmodern{a} fonts-lyx{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} groff-base{a} hevea{a} hicolor-icon-theme{a} ibverbs-providers{a} imagemagick{a} imagemagick-7-common{a} imagemagick-7.q16{a} intltool-debian{a} libabsl20230802{a} libamd-comgr2{a} libamd3{a} libamdhip64-5{a} libaom3{a} libapache-pom-java{a} libarchive-zip-perl{a} libargtable2-0{a} libarpack2t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif16{a} libblas3{a} libbrotli1{a} libcairo2{a} libcbor0.10{a} libcifpp-data{a} libcifpp7{a} libcolamd3{a} libcom-err2{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2t64{a} libcurl3t64-gnutls{a} libdav1d7{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-core-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libffi8{a} libfftw3-double3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgcrypt20{a} libgd3{a} libgfortran5{a} libglib2.0-0t64{a} libglpk40{a} libgnutls30t64{a} libgpg-error0{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libhpdf-2.3.0{a} libhsa-runtime64-1{a} libhsakmt1{a} libhts3t64{a} libhtscodecs2{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs1{a} libice6{a} libicu72{a} libidn12{a} libidn2-0{a} libigraph3t64{a} libijs-0.35{a} libimagequant0{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap2{a} liblerc4{a} libllvm17t64{a} liblmdb0{a} liblqr-1-0{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmagickcore-7.q16-10{a} libmagickwand-7.q16-10{a} libmariadb3{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libmpfi0{a} libmunge2{a} libncurses6{a} libnetpbm11t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnl-3-200{a} libnl-route-3-200{a} libnuma1{a} libopenjp2-7{a} libopenmpi40{a} libp11-kit0{a} libpaper-utils{a} libpaper2{a} libpciaccess0{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libplfit0{a} libpmix2t64{a} libpng16-16t64{a} libpotrace0{a} libpq5{a} libproc2-0{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libptexenc1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libraqm0{a} librav1e0.7{a} libraw23t64{a} librdmacm1t64{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libsuitesparseconfig7{a} libsvtav1enc2{a} libsynctex2{a} libtasn1-6{a} libtcl8.6{a} libteckit0{a} libtexlua53-5{a} libtext-charwidth-perl{a} libtext-wrapi18n-perl{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libunistring5{a} libuv1t64{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxi6{a} libxml2{a} libxmu6{a} libxnvctrl0{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libyuv0{a} libz3-4{a} libzzip-0-13t64{a} m4{a} mafft{a} man-db{a} mariadb-common{a} media-types{a} mpi-default-bin{a} muscle3{a} mysql-common{a} ncbi-blast+{a} ncbi-data{a} netbase{a} netpbm{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} phylip{a} phyml{a} po-debconf{a} poppler-data{a} prank{a} preview-latex-style{a} probcons{a} procps{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-cairo{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-docutils{a} python3-fonttools{a} python3-freetype{a} python3-fs{a} python3-idna{a} python3-igraph{a} python3-imagesize{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-mmtf{a} python3-more-itertools{a} python3-mpmath{a} python3-msgpack{a} python3-mysqldb{a} python3-networkx{a} python3-numpy{a} python3-numpy-dev{a} python3-numpydoc{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-psycopg2{a} python3-pygments{a} python3-pyparsing{a} python3-pytz{a} python3-rdflib{a} python3-reportlab{a} python3-requests{a} python3-rlpycairo{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tabulate{a} python3-texttable{a} python3-tk{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-zipp{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} raxml{a} readline-common{a} samtools{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} t-coffee{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} wise{a} wise-data{a} x11-common{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xml-core{a} zlib1g-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
amap-align curl dbus default-jre dialign-tx dvisvgm fonts-dejavu-extra fonts-droid-fallback fsa isympy-common javascript-common kalign krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libfl-dev libglib2.0-data libgpg-error-l10n libgpm2 libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libldap-common libltdl-dev libmagickcore-7.q16-10-extra libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libsoap-lite-perl libspreadsheet-parseexcel-perl libwww-perl libx11-protocol-perl libxml-simple-perl linux-sysctl-defaults lmodern lynx muscle mustang poa primer3 proda psmisc publicsuffix python3-bs4 python3-cssselect python3-gdal python3-html5lib python3-html5rdf python3-olefile python3-orjson python3-pooch python3-pydot python3-pygraphviz python3-yaml ruby shared-mime-info tex-gyre texlive-plain-generic tipa tk tm-align wget x11-utils x11-xserver-utils xauth xdg-user-dirs
0 packages upgraded, 381 newly installed, 0 to remove and 0 not upgraded.
Need to get 454 MB of archives. After unpacking 2036 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB]
Get: 2 http://deb.debian.org/debian unstable/main amd64 flex amd64 2.6.4-8.2+b4 [423 kB]
Get: 3 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB]
Get: 4 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2+b1 [781 kB]
Get: 5 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get: 6 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB]
Get: 7 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.47-1 [282 kB]
Get: 8 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB]
Get: 9 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB]
Get: 10 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB]
Get: 11 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB]
Get: 12 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+24 [217 kB]
Get: 13 http://deb.debian.org/debian unstable/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB]
Get: 14 http://deb.debian.org/debian unstable/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB]
Get: 15 http://deb.debian.org/debian unstable/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB]
Get: 16 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2 [317 kB]
Get: 17 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2 [391 kB]
Get: 18 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB]
Get: 19 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.1-1 [559 kB]
Get: 20 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.19.5-1+b1 [11.5 kB]
Get: 21 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.0.15-1+b3 [189 kB]
Get: 22 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.19.5-1+b1 [15.5 kB]
Get: 23 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.19.5-1+b1 [514 kB]
Get: 24 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB]
Get: 25 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3.1 [168 kB]
Get: 26 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB]
Get: 27 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get: 28 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.83.5-1 [1513 kB]
Get: 29 http://deb.debian.org/debian unstable/main amd64 liblqr-1-0 amd64 0.4.2-2.1+b2 [29.5 kB]
Get: 30 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.5.4-4 [416 kB]
Get: 31 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.3-1 [204 kB]
Get: 32 http://deb.debian.org/debian unstable/main amd64 libraw23t64 amd64 0.21.3-1+b1 [390 kB]
Get: 33 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB]
Get: 34 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB]
Get: 35 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB]
Get: 36 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB]
Get: 37 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB]
Get: 38 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB]
Get: 39 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB]
Get: 40 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB]
Get: 41 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB]
Get: 42 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB]
Get: 43 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB]
Get: 44 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB]
Get: 45 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB]
Get: 46 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b2 [699 kB]
Get: 47 http://deb.debian.org/debian unstable/main amd64 imagemagick-7-common all 8:7.1.1.43+dfsg1-1 [67.4 kB]
Get: 48 http://deb.debian.org/debian unstable/main amd64 libmagickcore-7.q16-10 amd64 8:7.1.1.43+dfsg1-1 [1843 kB]
Get: 49 http://deb.debian.org/debian unstable/main amd64 libmagickwand-7.q16-10 amd64 8:7.1.1.43+dfsg1-1 [340 kB]
Get: 50 http://deb.debian.org/debian unstable/main amd64 poppler-data all 0.4.12-1 [1601 kB]
Get: 51 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB]
Get: 52 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB]
Get: 53 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.2-2 [27.1 kB]
Get: 54 http://deb.debian.org/debian unstable/main amd64 media-types all 12.0.0 [28.9 kB]
Get: 55 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB]
Get: 56 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025a-2 [259 kB]
Get: 57 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB]
Get: 58 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get: 59 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB]
Get: 60 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.2-1 [745 kB]
Get: 61 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.2-2 [10.1 kB]
Get: 62 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.2-2 [28.1 kB]
Get: 63 http://deb.debian.org/debian unstable/main amd64 python3-numpy-dev amd64 1:2.2.3+ds-4 [139 kB]
Get: 64 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-2 [160 kB]
Get: 65 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-17 [836 kB]
Get: 66 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-2 [2452 kB]
Get: 67 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:2.2.3+ds-4 [5085 kB]
Get: 68 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB]
Get: 69 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-7 [64.9 kB]
Get: 70 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-7 [878 kB]
Get: 71 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB]
Get: 72 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.4.1-1 [1427 kB]
Get: 73 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20241223 [164 kB]
Get: 74 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB]
Get: 75 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB]
Get: 76 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB]
Get: 77 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB]
Get: 78 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB]
Get: 79 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB]
Get: 80 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.4-5 [92.4 kB]
Get: 81 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB]
Get: 82 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB]
Get: 83 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB]
Get: 84 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB]
Get: 85 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB]
Get: 86 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-4 [32.8 kB]
Get: 87 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB]
Get: 88 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-4 [80.9 kB]
Get: 89 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B]
Get: 90 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-4 [326 kB]
Get: 91 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-4 [138 kB]
Get: 92 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p2-1 [970 kB]
Get: 93 http://deb.debian.org/debian unstable/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B]
Get: 94 http://deb.debian.org/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B]
Get: 95 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0050 [42.7 kB]
Get: 96 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB]
Get: 97 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 98 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.17-3 [862 kB]
Get: 99 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB]
Get: 100 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1042 kB]
Get: 101 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b4 [27.8 kB]
Get: 102 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b4 [54.5 kB]
Get: 103 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b3 [17.0 kB]
Get: 104 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.16-1 [793 kB]
Get: 105 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-8 [591 kB]
Get: 106 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-8 [5984 B]
Get: 107 http://deb.debian.org/debian unstable/main amd64 bwa amd64 0.7.18-1 [212 kB]
Get: 108 http://deb.debian.org/debian unstable/main amd64 libargtable2-0 amd64 13-3 [18.3 kB]
Get: 109 http://deb.debian.org/debian unstable/main amd64 clustalo amd64 1.2.4-8 [267 kB]
Get: 110 http://deb.debian.org/debian unstable/main amd64 clustalw amd64 2.1+lgpl-7 [282 kB]
Get: 111 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 112 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB]
Get: 113 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 114 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 115 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 116 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 117 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB]
Get: 118 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB]
Get: 119 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB]
Get: 120 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB]
Get: 121 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 122 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 123 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.24.1 [920 kB]
Get: 124 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB]
Get: 125 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.6.0-1 [65.3 kB]
Get: 126 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB]
Get: 127 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.2-1 [37.3 kB]
Get: 128 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB]
Get: 129 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B]
Get: 130 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB]
Get: 131 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.8.0-1 [222 kB]
Get: 132 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB]
Get: 133 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB]
Get: 134 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.8.0-1 [724 kB]
Get: 135 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20250108 [113 kB]
Get: 136 http://deb.debian.org/debian unstable/main amd64 dialign amd64 2.2.1-13 [138 kB]
Get: 137 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB]
Get: 138 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB]
Get: 139 http://deb.debian.org/debian unstable/main amd64 libcifpp-data all 7.0.9-1 [484 kB]
Get: 140 http://deb.debian.org/debian unstable/main amd64 libcifpp7 amd64 7.0.9-1 [1032 kB]
Get: 141 http://deb.debian.org/debian unstable/main amd64 dssp amd64 4.4.10-1 [697 kB]
Get: 142 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.12.0-1 [1870 kB]
Get: 143 http://deb.debian.org/debian unstable/main amd64 libabsl20230802 amd64 20230802.1-4.2 [471 kB]
Get: 144 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-3 [350 kB]
Get: 145 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-9+b1 [946 kB]
Get: 146 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2489 kB]
Get: 147 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1904.20250204-1 [174 kB]
Get: 148 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.2.0-1 [133 kB]
Get: 149 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB]
Get: 150 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB]
Get: 151 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB]
Get: 152 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.2.0-1 [479 kB]
Get: 153 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.2-1 [13.9 kB]
Get: 154 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b3 [56.2 kB]
Get: 155 http://deb.debian.org/debian unstable/main amd64 libgd3 amd64 2.3.3-12+b1 [126 kB]
Get: 156 http://deb.debian.org/debian unstable/main amd64 libhpdf-2.3.0 amd64 2.3.0+dfsg-1+b3 [343 kB]
Get: 157 http://deb.debian.org/debian unstable/main amd64 mysql-common all 5.8+1.1.1 [6784 B]
Get: 158 http://deb.debian.org/debian unstable/main amd64 mariadb-common all 1:11.4.5-1 [28.4 kB]
Get: 159 http://deb.debian.org/debian unstable/main amd64 libmariadb3 amd64 1:11.4.5-1 [185 kB]
Get: 160 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-9 [19.8 kB]
Get: 161 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-9 [57.5 kB]
Get: 162 http://deb.debian.org/debian unstable/main amd64 libldap2 amd64 2.6.9+dfsg-1 [192 kB]
Get: 163 http://deb.debian.org/debian unstable/main amd64 libpq5 amd64 17.4-1 [226 kB]
Get: 164 http://deb.debian.org/debian unstable/main amd64 emboss-lib amd64 6.6.0+dfsg-15 [2874 kB]
Get: 165 http://deb.debian.org/debian unstable/main amd64 emboss-data all 6.6.0+dfsg-15 [61.1 MB]
Get: 166 http://deb.debian.org/debian unstable/main amd64 emboss amd64 6.6.0+dfsg-15 [1072 kB]
Get: 167 http://deb.debian.org/debian unstable/main amd64 fasttree amd64 2.1.11-2 [181 kB]
Get: 168 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB]
Get: 169 http://deb.debian.org/debian unstable/main amd64 fonts-lmodern all 2.005-1 [4540 kB]
Get: 170 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.3-1 [190 kB]
Get: 171 http://deb.debian.org/debian unstable/main amd64 libgs-common all 10.04.0~dfsg-2 [148 kB]
Get: 172 http://deb.debian.org/debian unstable/main amd64 libgs10-common all 10.04.0~dfsg-2 [475 kB]
Get: 173 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-16 [112 kB]
Get: 174 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-16 [44.2 kB]
Get: 175 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.16.2-1 [177 kB]
Get: 176 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-16 [48.4 kB]
Get: 177 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB]
Get: 178 http://deb.debian.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB]
Get: 179 http://deb.debian.org/debian unstable/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB]
Get: 180 http://deb.debian.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB]
Get: 181 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.10-2+b1 [251 kB]
Get: 182 http://deb.debian.org/debian unstable/main amd64 libidn12 amd64 1.42-3 [81.0 kB]
Get: 183 http://deb.debian.org/debian unstable/main amd64 libijs-0.35 amd64 0.35-15.2 [14.8 kB]
Get: 184 http://deb.debian.org/debian unstable/main amd64 libjbig2dec0 amd64 0.20-1+b3 [65.1 kB]
Get: 185 http://deb.debian.org/debian unstable/main amd64 libpaper2 amd64 2.2.5-0.3+b1 [16.6 kB]
Get: 186 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB]
Get: 187 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB]
Get: 188 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b2 [188 kB]
Get: 189 http://deb.debian.org/debian unstable/main amd64 libgs10 amd64 10.04.0~dfsg-2+b1 [2561 kB]
Get: 190 http://deb.debian.org/debian unstable/main amd64 ghostscript amd64 10.04.0~dfsg-2+b1 [50.9 kB]
Get: 191 http://deb.debian.org/debian unstable/main amd64 libnetpbm11t64 amd64 2:11.09.03-1 [184 kB]
Get: 192 http://deb.debian.org/debian unstable/main amd64 netpbm amd64 2:11.09.03-1 [2081 kB]
Get: 193 http://deb.debian.org/debian unstable/main amd64 tex-common all 6.19 [29.4 kB]
Get: 194 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 2.2.5-0.3+b1 [16.4 kB]
Get: 195 http://deb.debian.org/debian unstable/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-5+b1 [157 kB]
Get: 196 http://deb.debian.org/debian unstable/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-5+b1 [49.4 kB]
Get: 197 http://deb.debian.org/debian unstable/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-5+b1 [63.0 kB]
Get: 198 http://deb.debian.org/debian unstable/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-5+b1 [115 kB]
Get: 199 http://deb.debian.org/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB]
Get: 200 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB]
Get: 201 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB]
Get: 202 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB]
Get: 203 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB]
Get: 204 http://deb.debian.org/debian unstable/main amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB]
Get: 205 http://deb.debian.org/debian unstable/main amd64 libpotrace0 amd64 1.16-2+b2 [25.6 kB]
Get: 206 http://deb.debian.org/debian unstable/main amd64 libteckit0 amd64 2.5.12+ds1-1+b1 [341 kB]
Get: 207 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b4 [59.0 kB]
Get: 208 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB]
Get: 209 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB]
Get: 210 http://deb.debian.org/debian unstable/main amd64 libzzip-0-13t64 amd64 0.13.78+dfsg.1-0.1 [59.0 kB]
Get: 211 http://deb.debian.org/debian unstable/main amd64 texlive-binaries amd64 2024.20240313.70630+ds-5+b1 [8504 kB]
Get: 212 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB]
Get: 213 http://deb.debian.org/debian unstable/main amd64 texlive-base all 2024.20250114-1 [22.8 MB]
Get: 214 http://deb.debian.org/debian unstable/main amd64 hicolor-icon-theme all 0.18-2 [11.8 kB]
Get: 215 http://deb.debian.org/debian unstable/main amd64 imagemagick-7.q16 amd64 8:7.1.1.43+dfsg1-1 [726 kB]
Get: 216 http://deb.debian.org/debian unstable/main amd64 imagemagick amd64 8:7.1.1.43+dfsg1-1 [20.0 kB]
Get: 217 http://deb.debian.org/debian unstable/main amd64 hevea amd64 2.36-2+b3 [2073 kB]
Get: 218 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB]
Get: 219 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB]
Get: 220 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 56.0-2 [62.2 kB]
Get: 221 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 56.0-2 [357 kB]
Get: 222 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB]
Get: 223 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-21 [23.6 MB]
Get: 224 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB]
Get: 225 http://deb.debian.org/debian unstable/main amd64 libsuitesparseconfig7 amd64 1:7.9.0+dfsg-1 [32.0 kB]
Get: 226 http://deb.debian.org/debian unstable/main amd64 libamd3 amd64 1:7.9.0+dfsg-1 [48.9 kB]
Get: 227 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.124-1 [8180 B]
Get: 228 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.124-1 [38.9 kB]
Get: 229 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.124-1 [22.4 kB]
Get: 230 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB]
Get: 231 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.2.4+ds-1 [61.1 kB]
Get: 232 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-3 [535 kB]
Get: 233 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5+b1 [8882 kB]
Get: 234 http://deb.debian.org/debian unstable/main amd64 libapache-pom-java all 33-2 [5852 B]
Get: 235 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-4 [104 kB]
Get: 236 http://deb.debian.org/debian unstable/main amd64 libcolamd3 amd64 1:7.9.0+dfsg-1 [40.8 kB]
Get: 237 http://deb.debian.org/debian unstable/main amd64 libcommons-parent-java all 56-1 [10.8 kB]
Get: 238 http://deb.debian.org/debian unstable/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB]
Get: 239 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB]
Get: 240 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.8.0-1 [67.7 kB]
Get: 241 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.11.0-1 [131 kB]
Get: 242 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.11.0-1 [29.3 kB]
Get: 243 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB]
Get: 244 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB]
Get: 245 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB]
Get: 246 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.12.1-3 [365 kB]
Get: 247 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB]
Get: 248 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB]
Get: 249 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB]
Get: 250 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB]
Get: 251 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB]
Get: 252 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 56.0-2 [70.2 kB]
Get: 253 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB]
Get: 254 http://deb.debian.org/debian unstable/main amd64 libfontbox-java all 1:1.8.16-5 [211 kB]
Get: 255 http://deb.debian.org/debian unstable/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB]
Get: 256 http://deb.debian.org/debian unstable/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB]
Get: 257 http://deb.debian.org/debian unstable/main amd64 libglpk40 amd64 5.0-1+b2 [401 kB]
Get: 258 http://deb.debian.org/debian unstable/main amd64 libhtscodecs2 amd64 1.6.1-2 [95.8 kB]
Get: 259 http://deb.debian.org/debian unstable/main amd64 libhts3t64 amd64 1.21+ds-1 [463 kB]
Get: 260 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB]
Get: 261 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b2 [14.2 kB]
Get: 262 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB]
Get: 263 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.12.0-1 [164 kB]
Get: 264 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.12.0-1 [18.1 kB]
Get: 265 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 56.0-2 [29.8 kB]
Get: 266 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 56.0-2 [44.3 kB]
Get: 267 http://deb.debian.org/debian unstable/main amd64 libplfit0 amd64 0.9.6+ds-2+b1 [32.1 kB]
Get: 268 http://deb.debian.org/debian unstable/main amd64 libigraph3t64 amd64 0.10.15+ds-2 [914 kB]
Get: 269 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 270 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 271 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 272 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 8.1.3-5 [30.5 kB]
Get: 273 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB]
Get: 274 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB]
Get: 275 http://deb.debian.org/debian unstable/main amd64 liblmdb0 amd64 0.9.31-1+b2 [45.2 kB]
Get: 276 http://deb.debian.org/debian unstable/main amd64 libmbedcrypto16 amd64 3.6.2-3 [355 kB]
Get: 277 http://deb.debian.org/debian unstable/main amd64 libmbedx509-7 amd64 3.6.2-3 [147 kB]
Get: 278 http://deb.debian.org/debian unstable/main amd64 libmbedtls21 amd64 3.6.2-3 [234 kB]
Get: 279 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.16-1 [19.7 kB]
Get: 280 http://deb.debian.org/debian unstable/main amd64 libncurses6 amd64 6.5+20250216-1 [105 kB]
Get: 281 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.6-5 [651 kB]
Get: 282 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.18.1+ds-1 [1197 kB]
Get: 283 http://deb.debian.org/debian unstable/main amd64 libopenmpi40 amd64 5.0.7-1 [2365 kB]
Get: 284 http://deb.debian.org/debian unstable/main amd64 libpdfbox-java all 1:1.8.16-5 [5527 kB]
Get: 285 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.2-1 [2151 kB]
Get: 286 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB]
Get: 287 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.2-1 [5005 kB]
Get: 288 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.13.2-2 [10.3 kB]
Get: 289 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.13.2-2 [1068 B]
Get: 290 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB]
Get: 291 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.50.0-2 [154 kB]
Get: 292 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB]
Get: 293 http://deb.debian.org/debian unstable/main amd64 mafft amd64 7.505-1 [1078 kB]
Get: 294 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.7-1 [97.2 kB]
Get: 295 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.7-1 [189 kB]
Get: 296 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.18 [2576 B]
Get: 297 http://deb.debian.org/debian unstable/main amd64 muscle3 amd64 3.8.1551-3 [247 kB]
Get: 298 http://deb.debian.org/debian unstable/main amd64 ncbi-data all 6.1.20170106+dfsg2-5 [3537 kB]
Get: 299 http://deb.debian.org/debian unstable/main amd64 ncbi-blast+ amd64 2.16.0+ds-6+b1 [15.2 MB]
Get: 300 http://deb.debian.org/debian unstable/main amd64 phylip amd64 1:3.697+dfsg-4 [957 kB]
Get: 301 http://deb.debian.org/debian unstable/main amd64 phyml amd64 3:3.3.20220408-4+b1 [1106 kB]
Get: 302 http://deb.debian.org/debian unstable/main amd64 prank amd64 0.0.170427+dfsg-3 [395 kB]
Get: 303 http://deb.debian.org/debian unstable/main amd64 preview-latex-style all 13.2-1 [350 kB]
Get: 304 http://deb.debian.org/debian unstable/main amd64 probcons amd64 1.12-14 [119 kB]
Get: 305 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.17.0-1 [6050 kB]
Get: 306 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-7 [2735 kB]
Get: 307 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB]
Get: 308 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.13.2-2 [1044 B]
Get: 309 http://deb.debian.org/debian unstable/main amd64 python3.13-dev amd64 3.13.2-1 [507 kB]
Get: 310 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.13.2-2 [26.1 kB]
Get: 311 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.13.2-2 [1064 B]
Get: 312 http://deb.debian.org/debian unstable/main amd64 python3-attr all 25.1.0-1 [68.7 kB]
Get: 313 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.17.0-1 [117 kB]
Get: 314 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b7 [320 kB]
Get: 315 http://deb.debian.org/debian unstable/main amd64 python3-cairo amd64 1.26.1-2+b2 [114 kB]
Get: 316 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2025.1.31+ds-1 [9652 B]
Get: 317 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB]
Get: 318 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.1-1+b1 [125 kB]
Get: 319 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.1-1+b1 [216 kB]
Get: 320 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B]
Get: 321 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB]
Get: 322 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB]
Get: 323 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB]
Get: 324 http://deb.debian.org/debian unstable/main amd64 python3-roman all 5.0-1 [10.6 kB]
Get: 325 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB]
Get: 326 http://deb.debian.org/debian unstable/main amd64 python3-pytz all 2025.1-3 [150 kB]
Get: 327 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2025.1-3 [4004 B]
Get: 328 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB]
Get: 329 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-6 [95.1 kB]
Get: 330 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.1-1+b1 [1288 kB]
Get: 331 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.4.0+dfsg-1+b1 [25.5 kB]
Get: 332 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.14.1-4+b1 [17.1 MB]
Get: 333 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB]
Get: 334 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-5 [4148 kB]
Get: 335 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB]
Get: 336 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB]
Get: 337 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.55.3-2+b1 [1448 kB]
Get: 338 http://deb.debian.org/debian unstable/main amd64 python3-freetype all 2.5.1-1 [89.3 kB]
Get: 339 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.10-1 [42.0 kB]
Get: 340 http://deb.debian.org/debian unstable/main amd64 python3-texttable all 1.7.0-1 [12.0 kB]
Get: 341 http://deb.debian.org/debian unstable/main amd64 python3-igraph amd64 0.11.8+ds-1 [327 kB]
Get: 342 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B]
Get: 343 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b3 [14.0 kB]
Get: 344 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.5-2 [107 kB]
Get: 345 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-3+b1 [62.0 kB]
Get: 346 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 11.1.0-5+b1 [513 kB]
Get: 347 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.2-1 [103 kB]
Get: 348 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.13.2-1 [9516 B]
Get: 349 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 11.1.0-5+b1 [81.6 kB]
Get: 350 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB]
Get: 351 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB]
Get: 352 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-7+b1 [23.0 MB]
Get: 353 http://deb.debian.org/debian unstable/main amd64 python3-msgpack amd64 1.0.3-3+b4 [84.5 kB]
Get: 354 http://deb.debian.org/debian unstable/main amd64 python3-mmtf all 1.1.3-1 [17.0 kB]
Get: 355 http://deb.debian.org/debian unstable/main amd64 python3-mysqldb amd64 1.4.6-2+b5 [50.6 kB]
Get: 356 http://deb.debian.org/debian unstable/main amd64 python3-networkx all 3.2.1-5 [13.0 MB]
Get: 357 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 8.1.3-5 [617 kB]
Get: 358 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-2 [836 kB]
Get: 359 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.3.0-1 [114 kB]
Get: 360 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-4 [72.1 kB]
Get: 361 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB]
Get: 362 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 8.1.3-5 [468 kB]
Get: 363 http://deb.debian.org/debian unstable/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB]
Get: 364 http://deb.debian.org/debian unstable/main amd64 python3-numpydoc all 1.8.0-1 [51.4 kB]
Get: 365 http://deb.debian.org/debian unstable/main amd64 python3-psycopg2 amd64 2.9.10-1+b1 [129 kB]
Get: 366 http://deb.debian.org/debian unstable/main amd64 python3-rdflib all 7.1.1-2 [472 kB]
Get: 367 http://deb.debian.org/debian unstable/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B]
Get: 368 http://deb.debian.org/debian unstable/main amd64 python3-reportlab all 4.3.1-1 [1158 kB]
Get: 369 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.0.2+dfsg-2 [1023 kB]
Get: 370 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-5 [7348 B]
Get: 371 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.0.2+dfsg-2 [29.7 kB]
Get: 372 http://deb.debian.org/debian unstable/main amd64 raxml amd64 8.2.13+dfsg-2 [1508 kB]
Get: 373 http://deb.debian.org/debian unstable/main amd64 samtools amd64 1.21-1 [667 kB]
Get: 374 http://deb.debian.org/debian unstable/main amd64 t-coffee amd64 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 [1032 kB]
Get: 375 http://deb.debian.org/debian unstable/main amd64 texlive-fonts-recommended all 2024.20250114-1 [4991 kB]
Get: 376 http://deb.debian.org/debian unstable/main amd64 texlive-latex-base all 2024.20250114-1 [1282 kB]
Get: 377 http://deb.debian.org/debian unstable/main amd64 texlive-latex-recommended all 2024.20250114-1 [8760 kB]
Get: 378 http://deb.debian.org/debian unstable/main amd64 texlive-pictures all 2024.20250114-1 [17.1 MB]
Get: 379 http://deb.debian.org/debian unstable/main amd64 texlive-latex-extra all 2024.20250114-1 [24.7 MB]
Get: 380 http://deb.debian.org/debian unstable/main amd64 wise-data all 2.4.1-25 [76.1 kB]
Get: 381 http://deb.debian.org/debian unstable/main amd64 wise amd64 2.4.1-25 [1037 kB]
Fetched 454 MB in 12s (37.6 MB/s)
Preconfiguring packages ...
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Preparing to unpack .../00-m4_1.4.19-5_amd64.deb ...
Unpacking m4 (1.4.19-5) ...
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Unpacking flex (2.6.4-8.2+b4) ...
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Unpacking fonts-lato (2.015-1) ...
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Unpacking libfftw3-double3:amd64 (3.3.10-2+b1) ...
Selecting previously unselected package libexpat1:amd64.
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Unpacking libexpat1:amd64 (2.6.4-1) ...
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Unpacking libbrotli1:amd64 (1.1.0-2+b7) ...
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Unpacking libpng16-16t64:amd64 (1.6.47-1) ...
Selecting previously unselected package libfreetype6:amd64.
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Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ...
Selecting previously unselected package fonts-dejavu-mono.
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Unpacking fonts-dejavu-mono (2.37-8) ...
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Unpacking libfontenc1:amd64 (1:1.1.8-1+b2) ...
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Unpacking x11-common (1:7.7+24) ...
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Unpacking xfonts-encodings (1:1.0.4-2.2) ...
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Unpacking xfonts-utils (1:7.7+7) ...
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Unpacking fonts-urw-base35 (20200910-8) ...
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Unpacking fontconfig-config (2.15.0-2) ...
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Unpacking libfontconfig1:amd64 (2.15.0-2) ...
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Unpacking libsharpyuv0:amd64 (1.5.0-0.1) ...
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Selecting previously unselected package libheif-plugin-dav1d:amd64.
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Selecting previously unselected package libde265-0:amd64.
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Unpacking libde265-0:amd64 (1.0.15-1+b3) ...
Selecting previously unselected package libheif-plugin-libde265:amd64.
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Selecting previously unselected package libheif1:amd64.
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Unpacking libheif1:amd64 (1.19.5-1+b1) ...
Selecting previously unselected package libjbig0:amd64.
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Unpacking libjbig0:amd64 (2.1-6.1+b2) ...
Selecting previously unselected package libjpeg62-turbo:amd64.
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Selecting previously unselected package libltdl7:amd64.
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Unpacking libltdl7:amd64 (2.5.4-4) ...
Selecting previously unselected package libopenjp2-7:amd64.
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Unpacking libopenjp2-7:amd64 (2.5.3-1) ...
Selecting previously unselected package libraw23t64:amd64.
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Unpacking libraw23t64:amd64 (0.21.3-1+b1) ...
Selecting previously unselected package libdeflate0:amd64.
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Selecting previously unselected package libwebp7:amd64.
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Selecting previously unselected package libwebpdemux2:amd64.
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Unpacking libxext6:amd64 (2:1.3.4-1+b3) ...
Selecting previously unselected package libicu72:amd64.
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Unpacking libicu72:amd64 (72.1-6) ...
Selecting previously unselected package libxml2:amd64.
Preparing to unpack .../45-libxml2_2.12.7+dfsg+really2.9.14-0.2+b2_amd64.deb ...
Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b2) ...
Selecting previously unselected package imagemagick-7-common.
Preparing to unpack .../46-imagemagick-7-common_8%3a7.1.1.43+dfsg1-1_all.deb ...
Unpacking imagemagick-7-common (8:7.1.1.43+dfsg1-1) ...
Selecting previously unselected package libmagickcore-7.q16-10:amd64.
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Unpacking libmagickcore-7.q16-10:amd64 (8:7.1.1.43+dfsg1-1) ...
Selecting previously unselected package libmagickwand-7.q16-10:amd64.
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Unpacking libmagickwand-7.q16-10:amd64 (8:7.1.1.43+dfsg1-1) ...
Selecting previously unselected package poppler-data.
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Unpacking poppler-data (0.4.12-1) ...
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Setting up libpython3.13-minimal:amd64 (3.13.2-1) ...
Setting up libexpat1:amd64 (2.6.4-1) ...
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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:amd64 (8.2-6) ...
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Setting up python3-minimal (3.13.2-2) ...
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Setting up libimagequant0:amd64 (2.18.0-1+b2) ...
Setting up libproc2-0:amd64 (2:4.0.4-7) ...
Setting up libunistring5:amd64 (1.3-1) ...
Setting up fonts-dejavu-mono (2.37-8) ...
Setting up libpng16-16t64:amd64 (1.6.47-1) ...
Setting up libhwloc15:amd64 (2.12.0-1) ...
Setting up python3-numpy-dev:amd64 (1:2.2.3+ds-4) ...
Setting up libidn12:amd64 (1.42-3) ...
Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ...
Setting up autopoint (0.23.1-1) ...
Setting up libmpfi0:amd64 (1.5.4+ds-4) ...
Setting up libmariadb3:amd64 (1:11.4.5-1) ...
Setting up fonts-dejavu-core (2.37-8) ...
Setting up wise-data (2.4.1-25) ...
Setting up libk5crypto3:amd64 (1.21.3-4) ...
Setting up libltdl7:amd64 (2.5.4-4) ...
Setting up libfftw3-double3:amd64 (3.3.10-2+b1) ...
Setting up libcifpp-data (7.0.9-1) ...
Setting up libkpathsea6:amd64 (2024.20240313.70630+ds-5+b1) ...
Setting up libsasl2-2:amd64 (2.1.28+dfsg1-9) ...
Setting up libgfortran5:amd64 (14.2.0-17) ...
Setting up libraw23t64:amd64 (0.21.3-1+b1) ...
Setting up autoconf (2.72-3) ...
Setting up libnghttp3-9:amd64 (1.8.0-1) ...
Setting up libwebp7:amd64 (1.5.0-0.1) ...
Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ...
Setting up libffi8:amd64 (3.4.7-1) ...
Setting up libnuma1:amd64 (2.0.18-1+b1) ...
Setting up dwz (0.15-1+b1) ...
Setting up libdav1d7:amd64 (1.5.1-1) ...
Setting up sensible-utils (0.0.24) ...
Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b2) ...
Setting up libtiff6:amd64 (4.5.1+git230720-5) ...
Setting up librav1e0.7:amd64 (0.7.1-9+b1) ...
Setting up libuchardet0:amd64 (0.0.8-1+b2) ...
Setting up procps (2:4.0.4-7) ...
Setting up libjson-perl (4.10000-1) ...
Setting up libnl-3-200:amd64 (3.7.0-0.3+b1) ...
Setting up libpsm2-2 (11.2.185-2.1) ...
Setting up openmpi-common (5.0.7-1) ...
Setting up libtasn1-6:amd64 (4.20.0-2) ...
Setting up clustalw (2.1+lgpl-7) ...
Setting up fonts-lmodern (2.005-1) ...
Setting up libsuitesparseconfig7:amd64 (1:7.9.0+dfsg-1) ...
Setting up libopenjp2-7:amd64 (2.5.3-1) ...
Setting up libx11-6:amd64 (2:1.8.10-2) ...
Setting up fasttree (2.1.11-2) ...
Setting up netbase (6.4) ...
Setting up libabsl20230802:amd64 (20230802.1-4.2) ...
Setting up libngtcp2-16:amd64 (1.11.0-1) ...
Setting up sgml-base (1.31) ...
Setting up libplfit0:amd64 (0.9.6+ds-2+b1) ...
Setting up libkrb5-3:amd64 (1.21.3-4) ...
Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10+b1) ...
Setting up libmbedcrypto16:amd64 (3.6.2-3) ...
Setting up libpaper2:amd64 (2.2.5-0.3+b1) ...
Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ...
update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode
Setting up libssh2-1t64:amd64 (1.11.1-1) ...
Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ...
Setting up libfido2-1:amd64 (1.15.0-1+b1) ...
Setting up libde265-0:amd64 (1.0.15-1+b3) ...
Setting up python-matplotlib-data (3.8.3-7) ...
Setting up openssl (3.4.1-1) ...
Setting up libwebpmux3:amd64 (1.5.0-0.1) ...
Setting up libdrm-common (2.4.124-1) ...
Setting up libyuv0:amd64 (0.0.1904.20250204-1) ...
Setting up dialign (2.2.1-13) ...
Setting up readline-common (8.2-6) ...
Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b2) ...
Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ...
Setting up sphinx-rtd-theme-common (3.0.2+dfsg-2) ...
Setting up xdg-utils (1.2.1-2) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up libldap2:amd64 (2.6.9+dfsg-1) ...
Setting up libsynctex2:amd64 (2024.20240313.70630+ds-5+b1) ...
Setting up prank (0.0.170427+dfsg-3) ...
Setting up libargtable2-0 (13-3) ...
Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ...
Setting up raxml (8.2.13+dfsg-2) ...
Setting up libpotrace0:amd64 (1.16-2+b2) ...
Setting up automake (1:1.17-3) ...
update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.14.1-2) ...
Setting up libice6:amd64 (2:1.1.1-1) ...
Setting up libhpdf-2.3.0:amd64 (2.3.0+dfsg-1+b3) ...
Setting up flex (2.6.4-8.2+b4) ...
Setting up liblapack3:amd64 (3.12.1-2) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
Setting up gettext (0.23.1-1) ...
Setting up libarpack2t64:amd64 (3.9.1-4) ...
Setting up libamd3:amd64 (1:7.9.0+dfsg-1) ...
Setting up libpdfbox-java (1:1.8.16-5) ...
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Setting up libxrender1:amd64 (1:0.9.10-1.1+b4) ...
Setting up libtool (2.5.4-4) ...
Setting up libcolamd3:amd64 (1:7.9.0+dfsg-1) ...
Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10+b1) ...
Setting up fontconfig-config (2.15.0-2) ...
Setting up libwebpdemux2:amd64 (1.5.0-0.1) ...
Setting up libcommons-parent-java (56-1) ...
Setting up libavahi-common3:amd64 (0.8-16) ...
Setting up libcommons-logging-java (1.3.0-1) ...
Setting up libxext6:amd64 (2:1.3.4-1+b3) ...
Setting up libcifpp7:amd64 (7.0.9-1) ...
Setting up libidn2-0:amd64 (2.3.7-2+b1) ...
Setting up libpaper-utils (2.2.5-0.3+b1) ...
Setting up clustalo (1.2.4-8) ...
Setting up dssp (4.4.10-1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libnl-route-3-200:amd64 (3.7.0-0.3+b1) ...
Setting up libxnvctrl0:amd64 (535.171.04-1+b2) ...
Setting up dh-autoreconf (20) ...
Setting up ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
152 added, 0 removed; done.
Setting up libglib2.0-0t64:amd64 (2.83.5-1) ...
No schema files found: doing nothing.
Setting up libmbedx509-7:amd64 (3.6.2-3) ...
Setting up libjs-jquery-ui (1.13.2+dfsg-1) ...
Setting up libptexenc1:amd64 (2024.20240313.70630+ds-5+b1) ...
Setting up libllvm17t64:amd64 (1:17.0.6-21) ...
Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ...
Setting up libglpk40:amd64 (5.0-1+b2) ...
Setting up libp11-kit0:amd64 (0.25.5-3) ...
Setting up libgssapi-krb5-2:amd64 (1.21.3-4) ...
Setting up libgav1-1:amd64 (0.19.0-3) ...
Setting up ucf (3.0050) ...
Setting up netpbm (2:11.09.03-1) ...
Setting up libjs-sphinxdoc (8.1.3-5) ...
Setting up libmbedtls21:amd64 (3.6.2-3) ...
Setting up libreadline8t64:amd64 (8.2-6) ...
Setting up dh-strip-nondeterminism (1.14.1-2) ...
Setting up libdrm2:amd64 (2.4.124-1) ...
Setting up liblqr-1-0:amd64 (0.4.2-2.1+b2) ...
Setting up groff-base (1.23.0-7) ...
Setting up xml-core (0.19) ...
Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ...
Setting up libharfbuzz0b:amd64 (10.2.0-1) ...
Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ...
Setting up libxss1:amd64 (1:1.2.3-1+b3) ...
Setting up libfontconfig1:amd64 (2.15.0-2) ...
Setting up libigraph3t64:amd64 (0.10.15+ds-2) ...
Setting up libsm6:amd64 (2:1.2.4-1) ...
Setting up libpython3.13-stdlib:amd64 (3.13.2-1) ...
Setting up libavahi-client3:amd64 (0.8-16) ...
Setting up libpython3-stdlib:amd64 (3.13.2-2) ...
Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ...
Setting up libdrm-amdgpu1:amd64 (2.4.124-1) ...
Setting up libpython3.13:amd64 (3.13.2-1) ...
Setting up libgnutls30t64:amd64 (3.8.9-2) ...
Setting up libibverbs1:amd64 (56.0-2) ...
Setting up libavif16:amd64 (1.2.0-1) ...
Setting up libxft2:amd64 (2.3.6-1+b4) ...
Setting up libxi6:amd64 (2:1.8.2-1) ...
Setting up ibverbs-providers:amd64 (56.0-2) ...
Setting up python3.13 (3.13.2-1) ...
Setting up openssh-client (1:9.9p2-1) ...
Setting up wise (2.4.1-25) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libtk8.6:amd64 (8.6.16-1) ...
Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ...
Setting up libpq5:amd64 (17.4-1) ...
Setting up python3 (3.13.2-2) ...
Setting up python3-zipp (3.21.0-1) ...
Setting up python3-freetype (2.5.1-1) ...
Setting up xfonts-utils (1:7.7+7) ...
Setting up python3-autocommand (2.2.2-3) ...
Setting up libhwloc-plugins:amd64 (2.12.0-1) ...
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up python3-markupsafe (2.1.5-1+b3) ...
Setting up libcairo2:amd64 (1.18.2-2) ...
Setting up python3.13-tk (3.13.2-1) ...
Setting up python3-platformdirs (4.3.6-1) ...
Setting up ncbi-blast+ (2.16.0+ds-6+b1) ...
Setting up python3-mysqldb (1.4.6-2+b5) ...
Setting up tex-common (6.19) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up python3-roman (5.0-1) ...
Setting up python3-decorator (5.1.1-5) ...
Setting up python3-jinja2 (3.1.5-2) ...
Setting up python3-pygments (2.18.0+dfsg-2) ...
Setting up python3-packaging (24.2-1) ...
Setting up python3-chardet (5.2.0+dfsg-2) ...
Setting up python3-pyparsing (3.1.2-1) ...
Setting up python3-certifi (2025.1.31+ds-1) ...
Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ...
Setting up python3-snowballstemmer (2.2.0-4) ...
Setting up python3-brotli (1.1.0-2+b7) ...
Setting up libraqm0:amd64 (0.10.2-1) ...
Setting up libpython3.13-dev:amd64 (3.13.2-1) ...
Setting up sphinx-common (8.1.3-5) ...
Setting up python3-cycler (0.12.1-1) ...
Setting up libxt6t64:amd64 (1:1.2.1-1.2+b2) ...
Setting up python3-kiwisolver (1.4.7-3+b1) ...
Setting up python3-idna (3.10-1) ...
Setting up python3-psycopg2 (2.9.10-1+b1) ...
Setting up python3-typing-extensions (4.12.2-2) ...
Setting up libpmix2t64:amd64 (5.0.6-5) ...
Setting up python3-numpy (1:2.2.3+ds-4) ...
Setting up python3-urllib3 (2.3.0-1) ...
Setting up python3-lxml:amd64 (5.3.1-1+b1) ...
Setting up python3-rdflib (7.1.1-2) ...
Setting up librdmacm1t64:amd64 (56.0-2) ...
Setting up python3-dateutil (2.9.0-3) ...
Setting up python3-contourpy (1.3.1-1+b1) ...
Setting up python3-msgpack (1.0.3-3+b4) ...
Setting up python3-mpmath (1.3.0-1) ...
Setting up libcups2t64:amd64 (2.4.10-2+b1) ...
Setting up libngtcp2-crypto-gnutls8:amd64 (1.11.0-1) ...
Setting up libhsakmt1:amd64 (6.2.4+ds-1) ...
Setting up python3-imagesize (1.4.1-1) ...
Setting up python3-more-itertools (10.6.0-1) ...
Setting up libfabric1:amd64 (1.17.0-3.1) ...
Setting up python3-sympy (1.13.3-5) ...
Setting up python3-attr (25.1.0-1) ...
Setting up python3-texttable (1.7.0-1) ...
Setting up tk8.6-blt2.5 (2.5.3+dfsg-8) ...
Setting up libxmu6:amd64 (2:1.1.3-3+b4) ...
Setting up python3-scipy (1.14.1-4+b1) ...
Setting up libpython3-dev:amd64 (3.13.2-2) ...
Setting up python3-cairo (1.26.1-2+b2) ...
Setting up python3-jaraco.functools (4.1.0-1) ...
Setting up python3-jaraco.context (6.0.1-1) ...
Setting up python3-babel (2.17.0-1) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up python3-lz4 (4.4.0+dfsg-1+b1) ...
Setting up python3-defusedxml (0.7.1-3) ...
Setting up python3-charset-normalizer (3.4.1-1+b1) ...
Setting up python3.13-dev (3.13.2-1) ...
Setting up python3-alabaster (0.7.16-0.1) ...
Setting up blt (2.5.3+dfsg-8) ...
Setting up preview-latex-style (13.2-1) ...
Setting up python3-typeguard (4.4.2-1) ...
Setting up libcurl3t64-gnutls:amd64 (8.12.1-3) ...
Setting up python3-tabulate (0.9.0-1) ...
Setting up python3-all (3.13.2-2) ...
Setting up python3-tk:amd64 (3.13.2-1) ...
Setting up debhelper (13.24.1) ...
Setting up python3-pytz (2025.1-3) ...
Setting up libxaw7:amd64 (2:1.0.16-1) ...
Setting up python3-mmtf (1.1.3-1) ...
Setting up fonts-urw-base35 (20200910-8) ...
Setting up python3-tz (2025.1-3) ...
Setting up python3-fs (2.4.16-6) ...
Setting up python3-pil:amd64 (11.1.0-5+b1) ...
Setting up python3-inflect (7.3.1-2) ...
Setting up python3-pil.imagetk:amd64 (11.1.0-5+b1) ...
Setting up python3-rlpycairo (0.3.0-3) ...
Setting up libpython3-all-dev:amd64 (3.13.2-2) ...
Setting up python3-jaraco.text (4.0.0-1) ...
Setting up python3-dev (3.13.2-2) ...
Setting up python3-requests (2.32.3+dfsg-4) ...
Setting up python3-reportlab (4.3.1-1) ...
Setting up texlive-binaries (2024.20240313.70630+ds-5+b1) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up python3-igraph (0.11.8+ds-1) ...
Setting up libhsa-runtime64-1:amd64 (6.1.2-3) ...
Setting up libhts3t64:amd64 (1.21+ds-1) ...
Setting up texlive-base (2024.20250114-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex
Setting up python3-pkg-resources (75.8.0-1) ...
Setting up python3-all-dev (3.13.2-2) ...
Setting up libgs10-common (10.04.0~dfsg-2) ...
Setting up python3-setuptools (75.8.0-1) ...
Setting up python3-networkx (3.2.1-5) ...
Setting up samtools (1.21-1) ...
Setting up libamdhip64-5 (5.7.1-5+b1) ...
Setting up texlive-latex-base (2024.20250114-1) ...
Setting up texlive-latex-recommended (2024.20250114-1) ...
Setting up texlive-pictures (2024.20250114-1) ...
Setting up texlive-fonts-recommended (2024.20250114-1) ...
Setting up libgs10:amd64 (10.04.0~dfsg-2+b1) ...
Setting up dh-python (6.20250108) ...
Setting up libucx0:amd64 (1.18.1+ds-1) ...
Setting up texlive-latex-extra (2024.20250114-1) ...
Setting up ghostscript (10.04.0~dfsg-2+b1) ...
Setting up libopenmpi40:amd64 (5.0.7-1) ...
Setting up openmpi-bin (5.0.7-1) ...
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up mpi-default-bin (1.18) ...
Setting up phyml (3:3.3.20220408-4+b1) ...
Setting up python3-fonttools (4.55.3-2+b1) ...
Setting up python3-ufolib2 (0.17.0+dfsg1-1) ...
Setting up libheif-plugin-dav1d:amd64 (1.19.5-1+b1) ...
Setting up libheif-plugin-libde265:amd64 (1.19.5-1+b1) ...
Setting up python3-matplotlib (3.8.3-7+b1) ...
Setting up libheif1:amd64 (1.19.5-1+b1) ...
Setting up libgd3:amd64 (2.3.3-12+b1) ...
Setting up libmagickcore-7.q16-10:amd64 (8:7.1.1.43+dfsg1-1) ...
Setting up emboss-lib (6.6.0+dfsg-15) ...
Setting up libmagickwand-7.q16-10:amd64 (8:7.1.1.43+dfsg1-1) ...
Setting up emboss (6.6.0+dfsg-15) ...
Setting up imagemagick-7.q16 (8:7.1.1.43+dfsg1-1) ...
update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/compare-im7.q16 to provide /usr/bin/compare-im7 (compare-im7) in auto mode
update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/animate-im7.q16 to provide /usr/bin/animate-im7 (animate-im7) in auto mode
update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/convert-im7.q16 to provide /usr/bin/convert-im7 (convert-im7) in auto mode
update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/composite-im7.q16 to provide /usr/bin/composite-im7 (composite-im7) in auto mode
update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/conjure-im7.q16 to provide /usr/bin/conjure-im7 (conjure-im7) in auto mode
update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/import-im7.q16 to provide /usr/bin/import-im7 (import-im7) in auto mode
update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/identify-im7.q16 to provide /usr/bin/identify-im7 (identify-im7) in auto mode
update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/stream-im7.q16 to provide /usr/bin/stream-im7 (stream-im7) in auto mode
update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/display-im7.q16 to provide /usr/bin/display-im7 (display-im7) in auto mode
update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/montage-im7.q16 to provide /usr/bin/montage-im7 (montage-im7) in auto mode
update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
update-alternatives: using /usr/bin/mogrify-im7.q16 to provide /usr/bin/mogrify-im7 (mogrify-im7) in auto mode
update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick (magick) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/magick.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick) doesn't exist
update-alternatives: using /usr/bin/magick-im7.q16 to provide /usr/bin/magick-im7 (magick-im7) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/magick-im7.1.gz because associated file /usr/share/man/man1/magick-im7.q16.1.gz (of link group magick-im7) doesn't exist
update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script (magick-script) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script) doesn't exist
update-alternatives: using /usr/bin/magick-script-im7.q16 to provide /usr/bin/magick-script-im7 (magick-script-im7) in auto mode
update-alternatives: warning: skip creation of /usr/share/man/man1/magick-script-im7.1.gz because associated file /usr/share/man/man1/magick-script-im7.q16.1.gz (of link group magick-script-im7) doesn't exist
Setting up hevea (2.36-2+b3) ...
Setting up imagemagick (8:7.1.1.43+dfsg1-1) ...
Processing triggers for libc-bin (2.41-3) ...
Processing triggers for sgml-base (1.31) ...
Setting up docutils-common (0.21.2+dfsg-2) ...
Processing triggers for sgml-base (1.31) ...
Setting up python3-docutils (0.21.2+dfsg-2) ...
Setting up python3-sphinx (8.1.3-5) ...
Setting up python3-sphinxcontrib.jquery (4.1-5) ...
Setting up python3-numpydoc (1.8.0-1) ...
Setting up python3-sphinx-rtd-theme (3.0.2+dfsg-2) ...
Processing triggers for ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for tex-common (6.19) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
This may take some time... done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/python-biopython-1.85+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-biopython_1.85+dfsg-2_source.changes
dpkg-buildpackage: info: source package python-biopython
dpkg-buildpackage: info: source version 1.85+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Michael R. Crusoe <crusoe@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
debian/rules clean
dh clean --with python3 --buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_auto_clean
pybuild --clean -i python{version} -p 3.13
I: pybuild base:311: python3.13 setup.py clean
running clean
removing '/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-3.13' does not exist -- can't clean it
rm -rf .pybuild/
find . -name \*.pyc -exec rm {} \;
cd Doc && make clean
make[2]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc'
rm -f api/Bio*.rst
rm -rf _build/doctrees
rm -rf _build/html
rm -rf _build/latex
make[2]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc'
rm -f Doc/install/Installation.pdf
rm -f Doc/install/Installation.txt
rm -f Doc/install/Installation.html
rm -f Doc/Tutorial.pdf Doc/biopdb_faq.pdf
rm -f Doc/Tutorial/*.aux
find Doc -name "*.pygtex" -o -name "*.pygstyle" -delete
rm -rf biopython.egg-info
rm -rf .pybuild
if [ -d Tests_avoid ] ; then \
mv Tests_avoid/* Tests ; \
rmdir Tests_avoid ; \
fi
rm -rf debian/tmp_tests
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_autoreconf_clean -O--buildsystem=pybuild
dh_clean -O--buildsystem=pybuild
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/python3-biopython.substvars debian/python-biopython-doc.substvars debian/python3-biopython-sql.substvars debian/files
rm -fr -- debian/python3-biopython/ debian/tmp/ debian/python-biopython-doc/ debian/python3-biopython-sql/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \)
debian/rules binary
dh binary --with python3 --buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
pybuild --configure -i python{version} -p 3.13
I: pybuild base:311: python3.13 setup.py config
running config
debian/rules override_dh_auto_build
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_auto_build
pybuild --build -i python{version} -p 3.13
I: pybuild base:311: /usr/bin/python3 setup.py build
running build
running build_py
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/SeqFeature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/Seq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/File.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/MaxEntropy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/kNN.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/NaiveBayes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/pairwise2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/bgzf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/SeqRecord.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/LogisticRegression.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy
copying Bio/Affy/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy
copying Bio/Affy/CelFile.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Affy
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/mauve.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/a2m.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/phylip.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/stockholm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/emboss.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/bigmaf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/maf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/bigpsl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/msf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/AlignInfo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/clustal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/fasta.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/hhr.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/bigbed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/bed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/analysis.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/sam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/tabular.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_ClustalOmega.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Muscle.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_MSAProbs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Dialign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Probcons.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Clustalw.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Prank.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_Mafft.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
copying Bio/Align/Applications/_TCoffee.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices
copying Bio/Align/substitution_matrices/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/StockholmIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/ClustalIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/Interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/MafIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/EmbossIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/NexusIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/MauveIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/MsfIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/PhylipIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
copying Bio/AlignIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/AlignIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Alphabet
copying Bio/Alphabet/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Alphabet
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application
copying Bio/Application/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/_writers.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/Applications.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/NCBIXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
copying Bio/Blast/NCBIWWW.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/CAPS
copying Bio/CAPS/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/CAPS
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
copying Bio/Cluster/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign
copying Bio/codonalign/codonalignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign
copying Bio/codonalign/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign
copying Bio/codonalign/codonseq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Compass
copying Bio/Compass/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Compass
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
copying Bio/Data/CodonTable.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
copying Bio/Data/IUPACData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
copying Bio/Data/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
copying Bio/Data/PDBData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
copying Bio/Emboss/Primer3.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
copying Bio/Emboss/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
copying Bio/Emboss/PrimerSearch.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
copying Bio/Emboss/Applications.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Emboss
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez
copying Bio/Entrez/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez
copying Bio/Entrez/Parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/cellosaurus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/Prosite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/Enzyme.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/Prodoc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
copying Bio/ExPASy/ScanProsite.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/ExPASy
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
copying Bio/GenBank/Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
copying Bio/GenBank/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
copying Bio/GenBank/utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
copying Bio/GenBank/Scanner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/GenBank
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo
copying Bio/Geo/Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo
copying Bio/Geo/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Geo
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics
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creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM
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copying Bio/HMM/MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM
copying Bio/HMM/Trainer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG
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creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Enzyme
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creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/Map
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creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf
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copying Bio/PDB/mmtf/mmtfio.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf
copying Bio/PDB/mmtf/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/mmtf
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/KEGG/KGML
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creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Medline
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creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
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copying Bio/motifs/transfac.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
copying Bio/motifs/pfm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
copying Bio/motifs/thresholds.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
copying Bio/motifs/matrix.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
copying Bio/motifs/mast.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
copying Bio/motifs/clusterbuster.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
copying Bio/motifs/xms.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
copying Bio/motifs/alignace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
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copying Bio/motifs/minimal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/applications
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copying Bio/motifs/applications/_xxmotif.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/applications
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/jaspar
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copying Bio/motifs/jaspar/db.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/jaspar
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus
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copying Bio/Nexus/Trees.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus
copying Bio/Nexus/Nodes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus
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creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/NMR
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creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Pathway
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copying Bio/SCOP/Des.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SCOP
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO
copying Bio/SearchIO/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO
copying Bio/SearchIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO
copying Bio/SearchIO/_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO
copying Bio/SearchIO/BlatIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO
copying Bio/SearchIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model
copying Bio/SearchIO/_model/hsp.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model
copying Bio/SearchIO/_model/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model
copying Bio/SearchIO/_model/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model
copying Bio/SearchIO/_model/query.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model
copying Bio/SearchIO/_model/hit.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/_model
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO
copying Bio/SearchIO/BlastIO/blast_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO
copying Bio/SearchIO/BlastIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO
copying Bio/SearchIO/BlastIO/blast_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/BlastIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO
copying Bio/SearchIO/HHsuiteIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO
copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HHsuiteIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/HmmerIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/_base.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/ExonerateIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO
copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO
copying Bio/SearchIO/InterproscanIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SearchIO/InterproscanIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/SnapGeneIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/QualityIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/TwoBitIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/PhdIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/SffIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/InsdcIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/PirIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/Interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/GckIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/NibIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/AbiIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/GfaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/UniprotIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/SeqXmlIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/PdbIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/IgIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/XdnaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/SwissIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/AceIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying Bio/SeqIO/TabIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/CheckSum.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/IsoelectricPoint.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/lcc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/ProtParam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/MeltingTemp.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
copying Bio/SeqUtils/ProtParamData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing
copying Bio/Sequencing/Phd.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing
copying Bio/Sequencing/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing
copying Bio/Sequencing/Ace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/_samtools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/_Novoalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
copying Bio/Sequencing/Applications/_bwa.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Sequencing/Applications
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SVDSuperimposer
copying Bio/SVDSuperimposer/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SVDSuperimposer
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt
copying Bio/SwissProt/KeyWList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt
copying Bio/SwissProt/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SwissProt
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/TogoWS
copying Bio/TogoWS/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/TogoWS
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/NeXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/PhyloXMLIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/CDAOIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/TreeConstruction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/Newick.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/_utils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/Consensus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/NexusIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/NeXMLIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/CDAO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/NewickIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/PhyloXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/_io.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/_cdao_owl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
copying Bio/Phylo/BaseTree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Raxml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Phyml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
copying Bio/Phylo/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
copying Bio/Phylo/Applications/_Fasttree.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/Applications
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/chi2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_parse_codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/_paml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
copying Bio/Phylo/PAML/baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Phylo/PAML
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniGene
copying Bio/UniGene/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniGene
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt
copying Bio/UniProt/GOA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt
copying Bio/UniProt/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/UniProt
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/BioSeqDatabase.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/BioSeq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/Loader.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
copying BioSQL/DBUtils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
running egg_info
creating biopython.egg-info
writing biopython.egg-info/PKG-INFO
writing dependency_links to biopython.egg-info/dependency_links.txt
writing requirements to biopython.egg-info/requires.txt
writing top-level names to biopython.egg-info/top_level.txt
writing manifest file 'biopython.egg-info/SOURCES.txt'
reading manifest file 'biopython.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files found matching 'Doc/_build'
warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '*.py{}' found anywhere in distribution
warning: no previously-included files matching '*.py-e' found anywhere in distribution
adding license file 'LICENSE'
adding license file 'LICENSE.rst'
writing manifest file 'biopython.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are
already explicitly excluding 'Bio.Align.substitution_matrices.data' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Entrez.DTDs' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Entrez.DTDs' to be distributed and are
already explicitly excluding 'Bio.Entrez.DTDs' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Entrez.XSDs' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Entrez.XSDs' to be distributed and are
already explicitly excluding 'Bio.Entrez.XSDs' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
copying Bio/cpairwise2module.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio
copying Bio/Align/_aligncore.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/_codonaligner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
copying Bio/Align/_pairwisealigner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BENNER22 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BENNER6 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BENNER74 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLASTN -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLASTP -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM45 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM50 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM62 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM80 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/BLOSUM90 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/DAYHOFF -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/FENG -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/GENETIC -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/GONNET1992 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/HOXD70 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/JOHNSON -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/JONES -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/LEVIN -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/MCLACHLAN -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/MDM78 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/MEGABLAST -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/NUC.4.4 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/PAM250 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/PAM30 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/PAM70 -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/RAO -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/RISLER -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/SCHNEIDER -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/STR -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Align/substitution_matrices/data/TRANS -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data
copying Bio/Cluster/cluster.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
copying Bio/Cluster/cluster.h -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
copying Bio/Cluster/clustermodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/BITS-embedded-index2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/BITS-question-answer2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/EMBL_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/GenBank_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/HomoloGene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-XHTMLtablesetup1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivearticle1-3-mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivecustom-classes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivecustom-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivecustom-models1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-archivecustom-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-chars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-common-atts1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-common1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-default-classes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-display1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-format1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-funding1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-journalmeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-link1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-list1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-math1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-mathml3-mathmlsetup1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-nlmcitation1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-notat1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-para1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-phrase1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-references1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-related-object1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-section1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB_Features.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
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copying Bio/Entrez/DTDs/esummary_clinvar.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/esummary_gene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/format.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/htmltable.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsa.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsb.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsc.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsn.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamso.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isoamsr.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isobox.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isocyr1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isocyr2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isodia.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isogrk4.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isolat1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isolat2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomfrk.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomopf.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isomscr.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isonum.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isopub.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/isotech.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/journalmeta.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/link.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/list.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/math.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml2.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml3-qname1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mathmlsetup.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mmlalias.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/mmlextra.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/modules.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/notat.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/para.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/phrase.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pmc-1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_020114.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_120101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_180101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_180601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/pubmed_190101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/references.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/section.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/taxon.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/xhtml-inlstyle-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/xhtml-table-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
copying Bio/Entrez/DTDs/xmlspecchars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs
creating /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs
copying Bio/Entrez/XSDs/IPGReportSet.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs
copying Bio/Entrez/XSDs/NCBI_BlastOutput2.mod.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs
copying Bio/Entrez/XSDs/NCBI_BlastOutput2.xsd -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/XSDs
copying Bio/motifs/_pwm.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs
copying Bio/Nexus/cnexus.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus
copying Bio/PDB/bcifhelpermodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB
copying Bio/PDB/ccealignmodule.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB
copying Bio/PDB/kdtrees.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB
copying Bio/SeqIO/_twoBitIO.c -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO
copying BioSQL/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL
running build_ext
building 'Bio.Align._codonaligner' extension
creating build/temp.linux-x86_64-cpython-313/Bio/Align
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Align/_codonaligner.c -o build/temp.linux-x86_64-cpython-313/Bio/Align/_codonaligner.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Align/_codonaligner.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so
building 'Bio.Align._pairwisealigner' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Align/_pairwisealigner.c -o build/temp.linux-x86_64-cpython-313/Bio/Align/_pairwisealigner.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Align/_pairwisealigner.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so
building 'Bio.Align._aligncore' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Align/_aligncore.c -o build/temp.linux-x86_64-cpython-313/Bio/Align/_aligncore.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Align/_aligncore.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so
building 'Bio.cpairwise2' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/cpairwise2module.c -o build/temp.linux-x86_64-cpython-313/Bio/cpairwise2module.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/cpairwise2module.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so
building 'Bio.Nexus.cnexus' extension
creating build/temp.linux-x86_64-cpython-313/Bio/Nexus
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Nexus/cnexus.c -o build/temp.linux-x86_64-cpython-313/Bio/Nexus/cnexus.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Nexus/cnexus.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so
building 'Bio.motifs._pwm' extension
creating build/temp.linux-x86_64-cpython-313/Bio/motifs
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/motifs/_pwm.c -o build/temp.linux-x86_64-cpython-313/Bio/motifs/_pwm.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/motifs/_pwm.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so
building 'Bio.Cluster._cluster' extension
creating build/temp.linux-x86_64-cpython-313/Bio/Cluster
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Cluster/cluster.c -o build/temp.linux-x86_64-cpython-313/Bio/Cluster/cluster.o -DCLUSTER_USE_PYTHON_MEMORY
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/Cluster/clustermodule.c -o build/temp.linux-x86_64-cpython-313/Bio/Cluster/clustermodule.o -DCLUSTER_USE_PYTHON_MEMORY
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/Cluster/cluster.o build/temp.linux-x86_64-cpython-313/Bio/Cluster/clustermodule.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so
building 'Bio.PDB.ccealign' extension
creating build/temp.linux-x86_64-cpython-313/Bio/PDB
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/PDB/ccealignmodule.c -o build/temp.linux-x86_64-cpython-313/Bio/PDB/ccealignmodule.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/PDB/ccealignmodule.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so
building 'Bio.PDB.kdtrees' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/PDB/kdtrees.c -o build/temp.linux-x86_64-cpython-313/Bio/PDB/kdtrees.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/PDB/kdtrees.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so
building 'Bio.PDB._bcif_helper' extension
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/PDB/bcifhelpermodule.c -o build/temp.linux-x86_64-cpython-313/Bio/PDB/bcifhelpermodule.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/PDB/bcifhelpermodule.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so
building 'Bio.SeqIO._twoBitIO' extension
creating build/temp.linux-x86_64-cpython-313/Bio/SeqIO
x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c Bio/SeqIO/_twoBitIO.c -o build/temp.linux-x86_64-cpython-313/Bio/SeqIO/_twoBitIO.o
x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biopython-1.85+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/Bio/SeqIO/_twoBitIO.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so
PYTHONPATH=/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build \
/usr/bin/make -C Doc html
make[2]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc'
Running Sphinx v8.1.3
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Application/__init__.py:39: BiopythonDeprecationWarning: The Bio.Application modules and modules relying on it have been deprecated.
Due to the on going maintenance burden of keeping command line application
wrappers up to date, we have decided to deprecate and eventually remove these
modules.
We instead now recommend building your command line and invoking it directly
with the subprocess module.
warnings.warn(
loading translations [en]... done
making output directory... done
Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`.
[autosummary] generating autosummary for: Tutorial/chapter_align.rst, Tutorial/chapter_appendix.rst, Tutorial/chapter_bibliography.rst, Tutorial/chapter_blast.rst, Tutorial/chapter_cluster.rst, Tutorial/chapter_contributing.rst, Tutorial/chapter_cookbook.rst, Tutorial/chapter_entrez.rst, Tutorial/chapter_graphics.rst, Tutorial/chapter_introduction.rst, ..., Tutorial/chapter_quick_start.rst, Tutorial/chapter_searchio.rst, Tutorial/chapter_seq_annot.rst, Tutorial/chapter_seq_objects.rst, Tutorial/chapter_seqio.rst, Tutorial/chapter_testing.rst, Tutorial/chapter_uniprot.rst, Tutorial/index.rst, api/index.rst, index.rst
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/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/codonalign/__init__.py:21: BiopythonExperimentalWarning: Bio.codonalign is an experimental module which may undergo significant changes prior to its future official release.
warnings.warn(
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/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/kNN.py:46: BiopythonDeprecationWarning: The 'Bio.kNN' module is deprecated and will be removed in a future release of Biopython. Consider using scikit-learn instead.
warnings.warn(
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/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/pairwise2.py:278: BiopythonDeprecationWarning: Bio.pairwise2 has been deprecated, and we intend to remove it in a future release of Biopython. As an alternative, please consider using Bio.Align.PairwiseAligner as a replacement, and contact the Biopython developers if you still need the Bio.pairwise2 module.
warnings.warn(
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looking for now-outdated files... none found
pickling environment... done
checking consistency... done
preparing documents... done
copying assets...
copying static files...
Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/language_data.js
Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/basic.css
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Writing evaluated template result to /build/reproducible-path/python-biopython-1.85+dfsg/Doc/_build/html/_static/js/versions.js
copying static files: done
copying extra files...
copying extra files: done
copying assets: done
writing output... [ 0%] Tutorial/chapter_align
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generating indices... genindex py-modindex done
writing additional pages... search done
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dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded.
The HTML pages are in _build/html.
make[2]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg/Doc'
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
set -e \
; for avoid in \
PAML_tools EmbossPhylipNew \
MSAProbs_tool PopGen_GenePop PopGen_GenePop_EasyController XXmotif_tool PDB_ResidueDepth mmtf mmtf_online GraphicsBitmaps \
\
BioSQL_MySQLdb BioSQL_psycopg2 \
; do mkdir -p Tests_avoid \
; mv Tests/test_${avoid}.py Tests_avoid \
; done
# For the doc package we need a clean testsuite without all the
# remaining files. So keep a clean copy here
mkdir -p debian/tmp_tests
cp -a Tests debian/tmp_tests
# remove duplicated file
rm -f debian/tmp_tests/Tests/Quality/example.fastq.gz
# Prepare resources necessary to dssp.
mkdir -pv /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data
mkdir: created directory '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data'
cp -v /usr/share/libcifpp/mmcif_pdbx.dic /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data
'/usr/share/libcifpp/mmcif_pdbx.dic' -> '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/mmcif_pdbx.dic'
cp -v /usr/share/libcifpp/mmcif_ma.dic /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data
'/usr/share/libcifpp/mmcif_ma.dic' -> '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/mmcif_ma.dic'
cp -v debian/tests/mini-ccd.cif /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/components.cif
'debian/tests/mini-ccd.cif' -> '/build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data/components.cif'
# We also keep the tests we need to avoid for later inspection
test ! -d Tests_avoid || cp -a Tests_avoid debian/tmp_tests
# in the Debian package dialign it is not needed to set
# DIALIGN2_DIR but the test is verifying this dir to run the
# EMBOSS test test_Emboss also requires to have the environment
# variable EMBOSS_ROOT set
LC_ALL=C.UTF-8 \
dh_auto_test -- \
--test \
--system=custom \
--test-args=' \
set -e; \
mkdir -p {build_dir}/home; \
mkdir -p {build_dir}/Doc/examples; \
cp -a Doc/Tutorial {build_dir}/Doc; \
cp -a Doc/examples {build_dir}/Doc; \
cp -a Tests {build_dir}; \
cd {build_dir}/Tests; \
env DIALIGN2_DIR=/usr/share/dialign \
EMBOSS_ROOT=/usr/lib/emboss \
HOME={build_dir}/home \
{interpreter} run_tests.py --offline'
pybuild --test -i python{version} -p 3.13 --test --system=custom "--test-args= \\\
set -e; \\\
mkdir -p {build_dir}/home; \\\
mkdir -p {build_dir}/Doc/examples; \\\
cp -a Doc/Tutorial {build_dir}/Doc; \\\
cp -a Doc/examples {build_dir}/Doc; \\\
cp -a Tests {build_dir}; \\\
cd {build_dir}/Tests; \\\
env DIALIGN2_DIR=/usr/share/dialign \\\
EMBOSS_ROOT=/usr/lib/emboss \\\
HOME={build_dir}/home \\\
{interpreter} run_tests.py --offline"
I: pybuild base:311: \
set -e; \
mkdir -p /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/home; \
mkdir -p /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples; \
cp -a Doc/Tutorial /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc; \
cp -a Doc/examples /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc; \
cp -a Tests /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build; \
cd /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests; \
env DIALIGN2_DIR=/usr/share/dialign \
EMBOSS_ROOT=/usr/lib/emboss \
HOME=/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/home \
python3.13 run_tests.py --offline
test_Ace ... ok
test_Affy ... ok
test_AlignIO ... ok
test_AlignIO_ClustalIO ... ok
test_AlignIO_EmbossIO ... ok
test_AlignIO_FastaIO ... ok
test_AlignIO_MauveIO ... ok
test_AlignIO_PhylipIO ... ok
test_AlignIO_convert ... ok
test_AlignInfo ... ok
test_Align_Alignment ... ok
test_Align_a2m ... ok
test_Align_bed ... ok
test_Align_bigbed ... ok
test_Align_bigmaf ... ok
test_Align_bigpsl ... ok
test_Align_chain ... ok
test_Align_clustal ... ok
test_Align_codonalign ... ok
test_Align_emboss ... ok
test_Align_exonerate ... ok
test_Align_fasta ... ok
test_Align_hhr ... ok
test_Align_maf ... ok
test_Align_mauve ... ok
test_Align_msf ... ok
test_Align_nexus ... ok
test_Align_phylip ... ok
test_Align_psl ... ok
test_Align_sam ... ok
test_Align_stockholm ... ok
test_Align_tabular ... ok
test_Application ... ok
test_BWA_tool ... ok
test_BioSQL_MySQLdb_online ... skipping. internet not available
test_BioSQL_mysql_connector ... skipping. BioSQL test configuration file biosql.ini missing (see biosql.ini.sample)
test_BioSQL_mysql_connector_online ... skipping. internet not available
test_BioSQL_psycopg2_online ... skipping. internet not available
test_BioSQL_sqlite3 ... ok
test_BioSQL_sqlite3_online ... skipping. internet not available
test_Blast_Record ... ok
test_Blast_parser ... ok
test_CAPS ... ok
test_Chi2 ... ok
test_ClustalOmega_tool ... ok
test_Clustalw_tool ... ok
test_Cluster ... ok
test_CodonTable ... ok
test_ColorSpiral ... ok
test_Compass ... ok
test_Consensus ... ok
test_Dialign_tool ... ok
test_EMBL_unittest ... ok
test_Emboss ... ok
test_EmbossPrimer ... ok
test_Entrez ... ok
test_Entrez_online ... skipping. internet not available
test_Entrez_parser ... ok
test_Enzyme ... ok
test_ExPASy ... skipping. internet not available
test_Fasttree_tool ... ok
test_File ... ok
test_GenBank ... /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/InsdcIO.py:600: BiopythonWarning: Annotation 'Sequence Read Archive: SRX001885, SRX001121, SRX001531, SRX001530, SRX001529' too long
warnings.warn(f"Annotation {text!r} too long", BiopythonWarning)
ok
test_GenomeDiagram ... Warn: Can't find .pfb for face 'Helvetica'
ok
test_GraphicsChromosome ... ok
test_GraphicsDistribution ... ok
test_GraphicsGeneral ... ok
test_HMMCasino ... ok
test_HMMGeneral ... ok
test_KEGG ... ok
test_KEGG_online ... skipping. internet not available
test_KGML_graphics ... ok
test_KGML_graphics_online ... skipping. internet not available
test_KGML_nographics ... ok
test_KeyWList ... ok
test_LogisticRegression ... ok
test_MafIO_index ... ok
test_Mafft_tool ... ok
test_MarkovModel ... ok
test_Medline ... ok
test_Muscle_tool ... ok
test_NCBIXML ... Exception ignored in: <generator object parse at 0x7f8ee0b6aa40>
Traceback (most recent call last):
File "/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Blast/NCBIXML.py", line 1319, in parse
expat_parser.Parse(NULL, True)
xml.parsers.expat.ExpatError: unclosed token: line 320, column 0
ok
test_NCBI_BLAST_tools ... ok
test_NCBI_qblast ... ok
test_NMR ... ok
test_NaiveBayes ... ok
test_Nexus ... ok
test_PAML_baseml ... ok
test_PAML_codeml ... ok
test_PAML_yn00 ... ok
test_PDB_CEAligner ... ok
test_PDB_DSSP ... ok
test_PDB_Dice ... ok
test_PDB_Disordered ... ok
test_PDB_Exposure ... ok
test_PDB_FragmentMapper ... ok
test_PDB_KDTree ... ok
test_PDB_MMCIF2Dict ... ok
test_PDB_MMCIFIO ... ok
test_PDB_MMCIFParser ... ok
test_PDB_NACCESS ... ok
test_PDB_PDBIO ... ok
test_PDB_PDBList ... skipping. internet not available
test_PDB_PDBMLParser ... ok
test_PDB_PDBParser ... ok
test_PDB_PSEA ... skipping. Download and install psea from ftp://ftp.lmcp.jussieu.fr/pub/sincris/software/protein/p-sea/. Make sure that psea is on path
test_PDB_Polypeptide ... ok
test_PDB_QCPSuperimposer ... ok
test_PDB_SASA ... ok
test_PDB_SMCRA ... ok
test_PDB_Selection ... ok
test_PDB_StructureAlignment ... ok
test_PDB_Superimposer ... ok
test_PDB_alphafold_db ... skipping. internet not available
test_PDB_binary_cif ... /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 1, ' ') redefined at line 7.
warnings.warn(
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 15, ' ') redefined at line 144.
warnings.warn(
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 15, ' ') redefined at line 153.
warnings.warn(
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 1, ' ') redefined at line 0.
warnings.warn(
/build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/StructureBuilder.py:137: PDBConstructionWarning: WARNING: Residue (' ', 15, ' ') redefined at line 0.
warnings.warn(
ok
test_PDB_internal_coords ... ok
test_PDB_parse_pdb_header ... ok
test_PDB_vectors ... ok
test_PQR ... ok
test_Pathway ... ok
test_Phd ... ok
test_Phylo ... ok
test_PhyloXML ... ok
test_Phylo_CDAO ... ok
test_Phylo_NeXML ... ok
test_Phylo_igraph ... ok
test_Phylo_matplotlib ... ok
test_Phylo_networkx ... ok
test_PopGen_GenePop_nodepend ... ok
test_Prank_tool ... ok
test_Probcons_tool ... ok
test_ProtParam ... ok
test_RCSBFormats ... ok
test_Restriction ... ok
test_SCOP_Astral ... ok
test_SCOP_Cla ... ok
test_SCOP_Des ... ok
test_SCOP_Dom ... ok
test_SCOP_Hie ... ok
test_SCOP_Raf ... ok
test_SCOP_Residues ... ok
test_SCOP_Scop ... ok
test_SVDSuperimposer ... ok
test_SearchIO_blast_tab ... ok
test_SearchIO_blast_tab_index ... ok
test_SearchIO_blast_xml ... ok
test_SearchIO_blast_xml_index ... ok
test_SearchIO_blat_psl ... ok
test_SearchIO_blat_psl_index ... ok
test_SearchIO_exonerate ... ok
test_SearchIO_exonerate_text_index ... ok
test_SearchIO_exonerate_vulgar_index ... ok
test_SearchIO_fasta_m10 ... ok
test_SearchIO_fasta_m10_index ... ok
test_SearchIO_hhsuite2_text ... ok
test_SearchIO_hmmer2_text ... ok
test_SearchIO_hmmer2_text_index ... ok
test_SearchIO_hmmer3_domtab ... ok
test_SearchIO_hmmer3_domtab_index ... ok
test_SearchIO_hmmer3_tab ... ok
test_SearchIO_hmmer3_tab_index ... ok
test_SearchIO_hmmer3_text ... ok
test_SearchIO_hmmer3_text_index ... ok
test_SearchIO_interproscan_xml ... ok
test_SearchIO_model ... ok
test_SearchIO_write ... ok
test_SeqFeature ... ok
test_SeqIO ... ok
test_SeqIO_AbiIO ... ok
test_SeqIO_FastaIO ... ok
test_SeqIO_Gck ... ok
test_SeqIO_Gfa ... ok
test_SeqIO_Insdc ... ok
test_SeqIO_NibIO ... ok
test_SeqIO_PdbIO ... ok
test_SeqIO_QualityIO ... ok
test_SeqIO_SeqXML ... ok
test_SeqIO_SffIO ... ok
test_SeqIO_SnapGene ... ok
test_SeqIO_TwoBitIO ... ok
test_SeqIO_UniprotIO ... ok
test_SeqIO_Xdna ... ok
test_SeqIO_features ... ok
test_SeqIO_index ... ok
test_SeqIO_online ... skipping. internet not available
test_SeqIO_write ... ok
test_SeqRecord ... ok
test_SeqUtils ... ok
test_Seq_objs ... ok
test_SwissProt ... ok
test_TCoffee_tool ... ok
test_TogoWS ... skipping. internet not available
test_TreeConstruction ... ok
test_Tutorial ... /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__init__.py:3969: BiopythonWarning: One or more gap scores are greater than mismatch score. Algorithm may return incorrect results.
score, paths = super().align(sA, sB, strand)
ok
test_UniGene ... ok
test_UniProt ... skipping. internet not available
test_UniProt_GOA ... ok
test_align ... ok
test_align_substitution_matrices ... ok
test_bgzf ... ok
test_cellosaurus ... ok
test_codonalign ... ok
test_geo ... ok
test_kNN ... ok
test_motifs ... ok
test_motifs_online ... skipping. internet not available
test_pairwise2 ... ok
test_pairwise2_no_C ... ok
test_pairwise_aligner ... ok
test_pairwise_alignment_map ... ok
test_phenotype ... ok
test_phenotype_fit ... ok
test_phyml_tool ... ok
test_prodoc ... ok
test_prosite ... ok
test_raxml_tool ... ok
test_samtools_tool ... ok
test_seq ... ok
test_translate ... ok
Bio docstring test ... ok
Bio.Affy docstring test ... ok
Bio.Affy.CelFile docstring test ... ok
Bio.Align docstring test ... ok
Bio.Align.AlignInfo docstring test ... ok
Bio.Align.Applications docstring test ... ok
Bio.Align.Applications._ClustalOmega docstring test ... ok
Bio.Align.Applications._Clustalw docstring test ... ok
Bio.Align.Applications._Dialign docstring test ... ok
Bio.Align.Applications._MSAProbs docstring test ... ok
Bio.Align.Applications._Mafft docstring test ... ok
Bio.Align.Applications._Muscle docstring test ... ok
Bio.Align.Applications._Prank docstring test ... ok
Bio.Align.Applications._Probcons docstring test ... ok
Bio.Align.Applications._TCoffee docstring test ... ok
Bio.Align._aligncore docstring test ... ok
Bio.Align._codonaligner docstring test ... ok
Bio.Align._pairwisealigner docstring test ... ok
Bio.Align.a2m docstring test ... ok
Bio.Align.analysis docstring test ... ok
Bio.Align.bed docstring test ... ok
Bio.Align.bigbed docstring test ... ok
Bio.Align.bigmaf docstring test ... ok
Bio.Align.bigpsl docstring test ... ok
Bio.Align.chain docstring test ... ok
Bio.Align.clustal docstring test ... ok
Bio.Align.emboss docstring test ... ok
Bio.Align.exonerate docstring test ... ok
Bio.Align.fasta docstring test ... ok
Bio.Align.hhr docstring test ... ok
Bio.Align.interfaces docstring test ... ok
Bio.Align.maf docstring test ... ok
Bio.Align.mauve docstring test ... ok
Bio.Align.msf docstring test ... ok
Bio.Align.nexus docstring test ... ok
Bio.Align.phylip docstring test ... ok
Bio.Align.psl docstring test ... ok
Bio.Align.sam docstring test ... ok
Bio.Align.stockholm docstring test ... ok
Bio.Align.substitution_matrices docstring test ... ok
Bio.Align.tabular docstring test ... ok
Bio.AlignIO docstring test ... ok
Bio.AlignIO.ClustalIO docstring test ... ok
Bio.AlignIO.EmbossIO docstring test ... ok
Bio.AlignIO.FastaIO docstring test ... ok
Bio.AlignIO.Interfaces docstring test ... ok
Bio.AlignIO.MafIO docstring test ... ok
Bio.AlignIO.MauveIO docstring test ... ok
Bio.AlignIO.MsfIO docstring test ... ok
Bio.AlignIO.NexusIO docstring test ... ok
Bio.AlignIO.PhylipIO docstring test ... ok
Bio.AlignIO.StockholmIO docstring test ... ok
Bio.Application docstring test ... ok
Bio.Blast docstring test ... ok
Bio.Blast.Applications docstring test ... ok
Bio.Blast.NCBIWWW docstring test ... ok
Bio.Blast.NCBIXML docstring test ... ok
Bio.Blast._parser docstring test ... ok
Bio.Blast._writers docstring test ... ok
Bio.CAPS docstring test ... ok
Bio.Cluster docstring test ... ok
Bio.Cluster._cluster docstring test ... ok
Bio.Compass docstring test ... ok
Bio.Data docstring test ... ok
Bio.Data.CodonTable docstring test ... ok
Bio.Data.IUPACData docstring test ... ok
Bio.Data.PDBData docstring test ... ok
Bio.Emboss docstring test ... ok
Bio.Emboss.Applications docstring test ... ok
Bio.Emboss.Primer3 docstring test ... ok
Bio.Emboss.PrimerSearch docstring test ... ok
Bio.Entrez.Parser docstring test ... ok
Bio.ExPASy.Enzyme docstring test ... ok
Bio.ExPASy.Prodoc docstring test ... ok
Bio.ExPASy.Prosite docstring test ... ok
Bio.ExPASy.ScanProsite docstring test ... ok
Bio.File docstring test ... ok
Bio.GenBank docstring test ... ok
Bio.GenBank.Record docstring test ... ok
Bio.GenBank.Scanner docstring test ... ok
Bio.GenBank.utils docstring test ... ok
Bio.Geo docstring test ... ok
Bio.Geo.Record docstring test ... ok
Bio.Graphics docstring test ... ok
Bio.Graphics.BasicChromosome docstring test ... ok
Bio.Graphics.ColorSpiral docstring test ... ok
Bio.Graphics.Comparative docstring test ... ok
Bio.Graphics.DisplayRepresentation docstring test ... ok
Bio.Graphics.Distribution docstring test ... ok
Bio.Graphics.GenomeDiagram docstring test ... ok
Bio.Graphics.GenomeDiagram._AbstractDrawer docstring test ... ok
Bio.Graphics.GenomeDiagram._CircularDrawer docstring test ... ok
Bio.Graphics.GenomeDiagram._Colors docstring test ... ok
Bio.Graphics.GenomeDiagram._CrossLink docstring test ... ok
Bio.Graphics.GenomeDiagram._Diagram docstring test ... ok
Bio.Graphics.GenomeDiagram._Feature docstring test ... ok
Bio.Graphics.GenomeDiagram._FeatureSet docstring test ... ok
Bio.Graphics.GenomeDiagram._Graph docstring test ... ok
Bio.Graphics.GenomeDiagram._GraphSet docstring test ... ok
Bio.Graphics.GenomeDiagram._LinearDrawer docstring test ... ok
Bio.Graphics.GenomeDiagram._Track docstring test ... ok
Bio.Graphics.KGML_vis docstring test ... ok
Bio.HMM docstring test ... ok
Bio.HMM.DynamicProgramming docstring test ... ok
Bio.HMM.MarkovModel docstring test ... ok
Bio.HMM.Trainer docstring test ... ok
Bio.HMM.Utilities docstring test ... ok
Bio.KEGG docstring test ... ok
Bio.KEGG.Compound docstring test ... ok
Bio.KEGG.Enzyme docstring test ... ok
Bio.KEGG.Gene docstring test ... ok
Bio.KEGG.KGML docstring test ... ok
Bio.KEGG.KGML.KGML_parser docstring test ... ok
Bio.KEGG.KGML.KGML_pathway docstring test ... ok
Bio.KEGG.Map docstring test ... ok
Bio.KEGG.REST docstring test ... ok
Bio.LogisticRegression docstring test ... ok
Bio.MarkovModel docstring test ... ok
Bio.MaxEntropy docstring test ... ok
Bio.Medline docstring test ... ok
Bio.NMR docstring test ... ok
Bio.NMR.NOEtools docstring test ... ok
Bio.NMR.xpktools docstring test ... ok
Bio.NaiveBayes docstring test ... ok
Bio.Nexus docstring test ... ok
Bio.Nexus.Nexus docstring test ... ok
Bio.Nexus.Nodes docstring test ... ok
Bio.Nexus.StandardData docstring test ... ok
Bio.Nexus.Trees docstring test ... ok
Bio.Nexus.cnexus docstring test ... ok
Bio.PDB docstring test ... ok
Bio.PDB.AbstractPropertyMap docstring test ... ok
Bio.PDB.Atom docstring test ... ok
Bio.PDB.Chain docstring test ... ok
Bio.PDB.DSSP docstring test ... ok
Bio.PDB.Dice docstring test ... ok
Bio.PDB.Entity docstring test ... ok
Bio.PDB.FragmentMapper docstring test ... ok
Bio.PDB.HSExposure docstring test ... ok
Bio.PDB.MMCIF2Dict docstring test ... ok
Bio.PDB.MMCIFParser docstring test ... ok
Bio.PDB.Model docstring test ... ok
Bio.PDB.NACCESS docstring test ... ok
Bio.PDB.NeighborSearch docstring test ... ok
Bio.PDB.PDBExceptions docstring test ... ok
Bio.PDB.PDBIO docstring test ... ok
Bio.PDB.PDBList docstring test ... ok
Bio.PDB.PDBMLParser docstring test ... ok
Bio.PDB.PDBParser docstring test ... ok
Bio.PDB.PICIO docstring test ... ok
Bio.PDB.PSEA docstring test ... ok
Bio.PDB.Polypeptide docstring test ... ok
Bio.PDB.Residue docstring test ... ok
Bio.PDB.ResidueDepth docstring test ... ok
Bio.PDB.SASA docstring test ... ok
Bio.PDB.SCADIO docstring test ... ok
Bio.PDB.Selection docstring test ... ok
Bio.PDB.Structure docstring test ... ok
Bio.PDB.StructureAlignment docstring test ... ok
Bio.PDB.StructureBuilder docstring test ... ok
Bio.PDB.Superimposer docstring test ... ok
Bio.PDB._bcif_helper docstring test ... ok
Bio.PDB.alphafold_db docstring test ... ok
Bio.PDB.binary_cif docstring test ... ok
Bio.PDB.ccealign docstring test ... ok
Bio.PDB.cealign docstring test ... ok
Bio.PDB.ic_data docstring test ... ok
Bio.PDB.ic_rebuild docstring test ... ok
Bio.PDB.internal_coords docstring test ... ok
Bio.PDB.kdtrees docstring test ... ok
Bio.PDB.mmcifio docstring test ... ok
Bio.PDB.mmtf docstring test ... ok
Bio.PDB.mmtf.DefaultParser docstring test ... ok
Bio.PDB.mmtf.mmtfio docstring test ... ok
Bio.PDB.parse_pdb_header docstring test ... ok
Bio.PDB.qcprot docstring test ... ok
Bio.PDB.vectors docstring test ... ok
Bio.Pathway docstring test ... ok
Bio.Pathway.Rep docstring test ... ok
Bio.Pathway.Rep.Graph docstring test ... ok
Bio.Pathway.Rep.MultiGraph docstring test ... ok
Bio.Phylo docstring test ... ok
Bio.Phylo.Applications docstring test ... ok
Bio.Phylo.Applications._Fasttree docstring test ... ok
Bio.Phylo.Applications._Phyml docstring test ... ok
Bio.Phylo.Applications._Raxml docstring test ... ok
Bio.Phylo.BaseTree docstring test ... ok
Bio.Phylo.CDAO docstring test ... ok
Bio.Phylo.CDAOIO docstring test ... ok
Bio.Phylo.Consensus docstring test ... ok
Bio.Phylo.NeXML docstring test ... ok
Bio.Phylo.NeXMLIO docstring test ... ok
Bio.Phylo.Newick docstring test ... ok
Bio.Phylo.NewickIO docstring test ... ok
Bio.Phylo.NexusIO docstring test ... ok
Bio.Phylo.PAML docstring test ... ok
Bio.Phylo.PAML._paml docstring test ... ok
Bio.Phylo.PAML._parse_baseml docstring test ... ok
Bio.Phylo.PAML._parse_codeml docstring test ... ok
Bio.Phylo.PAML._parse_yn00 docstring test ... ok
Bio.Phylo.PAML.baseml docstring test ... ok
Bio.Phylo.PAML.chi2 docstring test ... ok
Bio.Phylo.PAML.codeml docstring test ... ok
Bio.Phylo.PAML.yn00 docstring test ... ok
Bio.Phylo.PhyloXML docstring test ... ok
Bio.Phylo.PhyloXMLIO docstring test ... ok
Bio.Phylo.TreeConstruction docstring test ... ok
Bio.Phylo._cdao_owl docstring test ... ok
Bio.Phylo._io docstring test ... ok
Bio.Phylo._utils docstring test ... ok
Bio.PopGen docstring test ... ok
Bio.PopGen.GenePop docstring test ... ok
Bio.PopGen.GenePop.Controller docstring test ... ok
Bio.PopGen.GenePop.EasyController docstring test ... ok
Bio.PopGen.GenePop.FileParser docstring test ... ok
Bio.PopGen.GenePop.LargeFileParser docstring test ... ok
Bio.Restriction docstring test ... ok
Bio.Restriction.PrintFormat docstring test ... ok
Bio.Restriction.Restriction docstring test ... ok
Bio.Restriction.Restriction_Dictionary docstring test ... ok
Bio.SCOP docstring test ... ok
Bio.SCOP.Cla docstring test ... ok
Bio.SCOP.Des docstring test ... ok
Bio.SCOP.Dom docstring test ... ok
Bio.SCOP.Hie docstring test ... ok
Bio.SCOP.Raf docstring test ... ok
Bio.SCOP.Residues docstring test ... ok
Bio.SVDSuperimposer docstring test ... ok
Bio.SearchIO docstring test ... ok
Bio.SearchIO.BlastIO docstring test ... ok
Bio.SearchIO.BlastIO.blast_tab docstring test ... ok
Bio.SearchIO.BlastIO.blast_xml docstring test ... ok
Bio.SearchIO.BlatIO docstring test ... ok
Bio.SearchIO.ExonerateIO docstring test ... ok
Bio.SearchIO.ExonerateIO._base docstring test ... ok
Bio.SearchIO.ExonerateIO.exonerate_cigar docstring test ... ok
Bio.SearchIO.ExonerateIO.exonerate_text docstring test ... ok
Bio.SearchIO.ExonerateIO.exonerate_vulgar docstring test ... ok
Bio.SearchIO.FastaIO docstring test ... ok
Bio.SearchIO.HHsuiteIO docstring test ... ok
Bio.SearchIO.HHsuiteIO.hhsuite2_text docstring test ... ok
Bio.SearchIO.HmmerIO docstring test ... ok
Bio.SearchIO.HmmerIO._base docstring test ... ok
Bio.SearchIO.HmmerIO.hmmer2_text docstring test ... ok
Bio.SearchIO.HmmerIO.hmmer3_domtab docstring test ... ok
Bio.SearchIO.HmmerIO.hmmer3_tab docstring test ... ok
Bio.SearchIO.HmmerIO.hmmer3_text docstring test ... ok
Bio.SearchIO.InterproscanIO docstring test ... ok
Bio.SearchIO.InterproscanIO.interproscan_xml docstring test ... ok
Bio.SearchIO._index docstring test ... ok
Bio.SearchIO._model docstring test ... ok
Bio.SearchIO._model._base docstring test ... ok
Bio.SearchIO._model.hit docstring test ... ok
Bio.SearchIO._model.hsp docstring test ... ok
Bio.SearchIO._model.query docstring test ... ok
Bio.SearchIO._utils docstring test ... ok
Bio.Seq docstring test ... ok
Bio.SeqFeature docstring test ... ok
Bio.SeqIO docstring test ... ok
Bio.SeqIO.AbiIO docstring test ... ok
Bio.SeqIO.AceIO docstring test ... ok
Bio.SeqIO.FastaIO docstring test ... ok
Bio.SeqIO.GckIO docstring test ... ok
Bio.SeqIO.GfaIO docstring test ... ok
Bio.SeqIO.IgIO docstring test ... ok
Bio.SeqIO.InsdcIO docstring test ... ok
Bio.SeqIO.Interfaces docstring test ... ok
Bio.SeqIO.NibIO docstring test ... ok
Bio.SeqIO.PdbIO docstring test ... ok
Bio.SeqIO.PhdIO docstring test ... ok
Bio.SeqIO.PirIO docstring test ... ok
Bio.SeqIO.QualityIO docstring test ... ok
Bio.SeqIO.SeqXmlIO docstring test ... ok
Bio.SeqIO.SffIO docstring test ... ok
Bio.SeqIO.SnapGeneIO docstring test ... ok
Bio.SeqIO.SwissIO docstring test ... ok
Bio.SeqIO.TabIO docstring test ... ok
Bio.SeqIO.TwoBitIO docstring test ... ok
Bio.SeqIO.UniprotIO docstring test ... ok
Bio.SeqIO.XdnaIO docstring test ... ok
Bio.SeqIO._index docstring test ... ok
Bio.SeqIO._twoBitIO docstring test ... ok
Bio.SeqRecord docstring test ... ok
Bio.SeqUtils docstring test ... ok
Bio.SeqUtils.CheckSum docstring test ... ok
Bio.SeqUtils.IsoelectricPoint docstring test ... ok
Bio.SeqUtils.MeltingTemp docstring test ... ok
Bio.SeqUtils.ProtParam docstring test ... ok
Bio.SeqUtils.ProtParamData docstring test ... ok
Bio.SeqUtils.lcc docstring test ... ok
Bio.Sequencing docstring test ... ok
Bio.Sequencing.Ace docstring test ... ok
Bio.Sequencing.Applications docstring test ... ok
Bio.Sequencing.Applications._Novoalign docstring test ... ok
Bio.Sequencing.Applications._bwa docstring test ... ok
Bio.Sequencing.Applications._samtools docstring test ... ok
Bio.Sequencing.Phd docstring test ... ok
Bio.SwissProt docstring test ... ok
Bio.SwissProt.KeyWList docstring test ... ok
Bio.UniGene docstring test ... ok
Bio.UniProt.GOA docstring test ... ok
Bio._utils docstring test ... ok
Bio.bgzf docstring test ... ok
Bio.codonalign docstring test ... ok
Bio.codonalign.codonalignment docstring test ... ok
Bio.codonalign.codonseq docstring test ... ok
Bio.cpairwise2 docstring test ... ok
Bio.kNN docstring test ... ok
Bio.motifs docstring test ... ok
Bio.motifs._pwm docstring test ... ok
Bio.motifs.alignace docstring test ... ok
Bio.motifs.applications docstring test ... ok
Bio.motifs.applications._xxmotif docstring test ... ok
Bio.motifs.clusterbuster docstring test ... ok
Bio.motifs.jaspar docstring test ... ok
Bio.motifs.jaspar.db docstring test ... ok
Bio.motifs.mast docstring test ... ok
Bio.motifs.matrix docstring test ... ok
Bio.motifs.meme docstring test ... ok
Bio.motifs.minimal docstring test ... ok
Bio.motifs.pfm docstring test ... ok
Bio.motifs.thresholds docstring test ... ok
Bio.motifs.transfac docstring test ... ok
Bio.motifs.xms docstring test ... ok
Bio.pairwise2 docstring test ... ok
Bio.phenotype docstring test ... ok
Bio.phenotype.phen_micro docstring test ... ok
Bio.phenotype.pm_fitting docstring test ... ok
BioSQL docstring test ... ok
BioSQL.BioSeq docstring test ... ok
BioSQL.BioSeqDatabase docstring test ... ok
BioSQL.DBUtils docstring test ... ok
BioSQL.Loader docstring test ... ok
----------------------------------------------------------------------
Ran 552 tests in 841.699 seconds
Skipping any tests requiring internet access
Python version: 3.13.2 (main, Feb 5 2025, 01:23:35) [GCC 14.2.0]
Operating system: posix linux
rm -fr -- /tmp/dh-xdg-rundir-bz1rC2Er
# Cleanup steps after tests.
set -e \
; if [ -d Tests_avoid ] \
; then mv Tests_avoid/* Tests \
; rmdir Tests_avoid \
; fi
rm -r /build/reproducible-path/python-biopython-1.85+dfsg/libcifpp-data
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=pybuild
dh_prep -O--buildsystem=pybuild
rm -f -- debian/python3-biopython.substvars debian/python-biopython-doc.substvars debian/python3-biopython-sql.substvars
rm -fr -- debian/.debhelper/generated/python3-biopython/ debian/python3-biopython/ debian/tmp/ debian/.debhelper/generated/python-biopython-doc/ debian/python-biopython-doc/ debian/.debhelper/generated/python3-biopython-sql/ debian/python3-biopython-sql/
rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_auto_install
install -m0755 -d /build/reproducible-path/python-biopython-1.85\+dfsg/debian/tmp
pybuild --install -i python{version} -p 3.13 --dest-dir=/build/reproducible-path/python-biopython-1.85\+dfsg/debian/tmp
I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp
running install
/usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:79: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer or other
standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
running build_py
running egg_info
writing biopython.egg-info/PKG-INFO
writing dependency_links to biopython.egg-info/dependency_links.txt
writing requirements to biopython.egg-info/requires.txt
writing top-level names to biopython.egg-info/top_level.txt
reading manifest file 'biopython.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no previously-included files found matching 'Doc/_build'
warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip'
warning: no previously-included files matching '*.pyc' found anywhere in distribution
warning: no previously-included files matching '*.pyo' found anywhere in distribution
warning: no previously-included files matching '*.py{}' found anywhere in distribution
warning: no previously-included files matching '*.py-e' found anywhere in distribution
adding license file 'LICENSE'
adding license file 'LICENSE.rst'
writing manifest file 'biopython.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Align.substitution_matrices.data' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Align.substitution_matrices.data' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Align.substitution_matrices.data' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Align.substitution_matrices.data' to be distributed and are
already explicitly excluding 'Bio.Align.substitution_matrices.data' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.DTDs' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Entrez.DTDs' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Entrez.DTDs' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Entrez.DTDs' to be distributed and are
already explicitly excluding 'Bio.Entrez.DTDs' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:212: _Warning: Package 'Bio.Entrez.XSDs' is absent from the `packages` configuration.
!!
********************************************************************************
############################
# Package would be ignored #
############################
Python recognizes 'Bio.Entrez.XSDs' as an importable package[^1],
but it is absent from setuptools' `packages` configuration.
This leads to an ambiguous overall configuration. If you want to distribute this
package, please make sure that 'Bio.Entrez.XSDs' is explicitly added
to the `packages` configuration field.
Alternatively, you can also rely on setuptools' discovery methods
(for example by using `find_namespace_packages(...)`/`find_namespace:`
instead of `find_packages(...)`/`find:`).
You can read more about "package discovery" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
If you don't want 'Bio.Entrez.XSDs' to be distributed and are
already explicitly excluding 'Bio.Entrez.XSDs' via
`find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
you can try to use `exclude_package_data`, or `include-package-data=False` in
combination with a more fine grained `package-data` configuration.
You can read more about "package data files" on setuptools documentation page:
- https://setuptools.pypa.io/en/latest/userguide/datafiles.html
[^1]: For Python, any directory (with suitable naming) can be imported,
even if it does not contain any `.py` files.
On the other hand, currently there is no concept of package data
directory, all directories are treated like packages.
********************************************************************************
!!
check.warn(importable)
running build_ext
running install_lib
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/other_trees.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_tab_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Probcons_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Enzyme.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_maf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_PhylipIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/dottednum.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/lysinYangSwanson2002.nuc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/aa_alignment.phylip -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/longnames.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/alignment.phylip -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Alignments/dottednames.phylip -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Alignments
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/lysin.trees -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/species.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/lysin.trees.4.6 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Trees/bad.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Trees
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/clademodelC/clademodelC-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/clademodelC
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene34/ngene2_mgene34-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene34
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/pairwise/pairwise-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/pairwise
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_model0/aa_model0-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_model0
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_9a.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/m2a_rel/m2a_rel-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/m2a_rel
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene02/ngene2_mgene02-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene02
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/tree_regexp_versatility.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/branchsiteA/branchsiteA-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/branchsiteA
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/freeratio/freeratio-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/freeratio
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/SE/SE-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/SE
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/all_NSsites/all_NSsites-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/all_NSsites
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/aa_pairwise/aa_pairwise-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/aa_pairwise
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/ngene2_mgene1/ngene2_mgene1-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/ngene2_mgene1
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/codeml/NSsite3/NSsite3-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/codeml/NSsite3
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/baseml_alpha1rho1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/baseml_SE.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml44c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml41.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml43.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/versions/baseml44.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/versions
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo4-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo3-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nhomo/nhomo1-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nhomo
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/alpha1rho1/alpha1rho1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/alpha1rho1
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK2-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK3-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK4-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK2-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK2-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK3-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK4-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK4-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/nparK/nparK3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/nparK
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/SE/SE-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/SE
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model6-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model4-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model5-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model7-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model8-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model0-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model2-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model3-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/baseml/model/model1-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/baseml/model
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/bad_results.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00_dottednum-4_9i.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_4c.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00_dotted-4_9i.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_6.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_5.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00_long-4_8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Results/yn00/yn00-4_1.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Results/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/gen_results.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/bad3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/NSsite3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/all_NSsites.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/ngene2_mgene02.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/aa_pairwise.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/aa_model0.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/m2a_rel.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/codeml.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/freeratio.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/clademodelC.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/ngene2_mgene1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/pairwise.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/branchsiteA.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/ngene2_mgene34.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/codeml/SE.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/codeml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/species.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model6.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model7.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK4.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nhomo3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nhomo1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model2.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/baseml.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK2.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model8.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nparK3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model0.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/alpha1rho1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model3.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/nhomo4.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model4.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/model5.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml/SE.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/baseml
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/bad1.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/baseml.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/bad2.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00_long.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00_dotted.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PAML/Control_files/yn00/yn00_dottednum.ctl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/Control_files/yn00
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/biosql.ini.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/GU949562.1.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap_fuzzy.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/cor6_6.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.faa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/origin_line.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/blank_seq.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/DS830848.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_loc_wrap.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/empty_version.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/HM138502_output.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/one_of.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_000932.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/KF527485_output.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/empty_accession.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_000932.gb.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/iro.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.fna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/EU851978_output.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NT_019265.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/gbvrl1_start.seq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/qualifier_escaping_write.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.tsv -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_locus_line_spacing.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/noref.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/HM138502.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_misc_feature.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/tsa_acropora.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_000932.faa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/protein_refseq.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_structured_comment.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/negative_location.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/qualifier_escaping_read.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/invalid_product.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/noref_date_warning.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/EZ116220.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/addgene-plasmid-39296-sequence-49545.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/tls_KDHP01000000.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/pBAD30.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/cor6_6.gb.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/dbsource_wrap.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/KF527485.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/1MRR_A.gp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/no_end_marker.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/wrong_sequence_indent.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/arab1.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/protein_refseq2.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/empty_feature_qualifier.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NP_416719.gbwithparts -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/addgene-plasmid-11664-sequence-180430.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap_CDS.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/extra_keywords.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/EU851978.gbk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/NC_005816.ffn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/pri1.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/bad_origin_wrap_linear.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GenBank/no_origin_no_end.gb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GenBank
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/IntelliGenetics/VIF_mase-pro.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/IntelliGenetics/TAT_mase_nuc.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/IntelliGenetics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_convert.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_SMCRA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_CodonTable.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Compass.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Pathway.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/minimal_test.meme -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.INO_up800.classic.oops.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.psp_test.classic.zoops.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.Klf1-200.cd.oops.xml.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.Klf1-200.cd.oops.xml.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.adh.classic.oops.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/Arnt.sites -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/fourrows.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.farntrans5.classic.anr.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.crp0.de.oops.txt.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/alignace.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/clusterbuster.pfm.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/MA0056.1.transfac -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/REB1.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/clusterbuster.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.crp0.de.oops.txt.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/transfac.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/abdb.xms -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/SRF.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/minimal_test_rna.meme -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/meme.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/fourcolumns.pfm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/motifs/mast.adh.de.oops.html.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/motifs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blat_psl_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_pcr.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218L_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mirna.tab -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218_blastp_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_003.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_005.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mirna.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_005.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_009.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_010.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_short_result.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_012.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_013.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_007.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2228_tblastn_001.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_wait.html -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastx_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_psiblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2222_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_002.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_001.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_rpsblast_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_011.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_disco.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastn_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_rpsblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_008.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/phiblast.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_005.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_006.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastx_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastx_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/wnts.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_actin.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/broken4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastp_001_v2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_21500_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_006.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/html_msgid_29_blastx_001.html -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/megablast_legacy.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_psiblast_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml2_21500_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2218L_blastp_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2222_blastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastp_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_orchid.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2228_tblastx_001.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2900_blastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_005.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/mock_short_empty.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_004.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/tab_2226_tblastn_004.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastn_003.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_tblastn_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2212L_tblastx_001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/xml_2226_blastx_002.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blast/wnts.xml.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blast
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Mafft_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Entrez_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_psycopg2_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cluster
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cluster/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cluster
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ClustalOmega_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/proline.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/valine.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/lactate.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Enzymes/lipoprotein.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Enzymes
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Application.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_tabular.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_samtools_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/nexml.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/timetree.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/meta_taxa.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/taxa.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/tolweb.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/meta_types.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/sets.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/treebase-record.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/trees-uris.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/edgelabels.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/trees.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/phenoscape.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeXML/characters.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeXML
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_geo.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GraphicsGeneral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_CAPS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ColorSpiral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ExPASy.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GraphicsDistribution.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_SMCRA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_NACCESS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_sqlite3_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blat_psl_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Selection.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_kNN.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PDBIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_SASA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Prank_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NCBIXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_MMCIF2Dict.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Dialign_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bigmaf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KEGG_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_NibIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_model.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_AbiIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_prodoc.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_FastaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bigpsl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_ClustalIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_StructureAlignment.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_File.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blat_psl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_motifs_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Medline.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Affy.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Polypeptide.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_matplotlib.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_align.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_alphafold_db.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_fasta_m10.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_pairwise2.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Fasttree_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_EmbossPrimer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_sam.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Residues.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/common_BioSQL_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_features.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_codonalign.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_SffIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_QCPSuperimposer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Enzyme.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Compass.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_bed.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_interproscan_xml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NaiveBayes.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Scop.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PQR.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blast_tab.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_MySQLdb_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_sqlite3.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PAML_baseml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_NMR.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Entrez.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hhsuite2_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_FragmentMapper.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_HMMCasino.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_clustal.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Probcons_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Blast_parser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_psycopg2_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Blast_Record.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_Xdna.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_EmbossIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_MMCIFParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KEGG.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Des.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KGML_graphics_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_TwoBitIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_TCoffee_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_samtools_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PSEA.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Seq_objs.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_CDAO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_HMMGeneral.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_CodonTable.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_DSSP.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_fasta.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_mauve.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Pathway.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_SnapGene.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer2_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_pairwise_aligner.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Hie.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_vectors.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PAML_codeml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_bgzf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Cla.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Cluster.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_hhr.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_write.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_QualityIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_binary_cif.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Phylo_networkx.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_Gck.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_exonerate.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_motifs.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Restriction.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_a2m.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_UniprotIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SVDSuperimposer.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_TreeConstruction.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_psl.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/requires_internet.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PhyloXML.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_prosite.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_text_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_fasta_m10_index.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_TogoWS.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Dom.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SCOP_Raf.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_chain.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_hmmer3_text.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BioSQL_mysql_connector.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_translate.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_PDBMLParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_MarkovModel.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_phenotype.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Application.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignInfo.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_blast_xml.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Consensus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_nexus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_UniProt.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_BWA_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Muscle_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SearchIO_write.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_seq.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/common_BioSQL.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_PDB_Exposure.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_Alignment.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_FastaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Chi2.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_MauveIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KeyWList.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqRecord.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_KGML_nographics.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_align_substitution_matrices.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SeqIO_online.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_PhylipIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_AlignIO_convert.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Ace.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_RCSBFormats.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Nexus.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_ClustalOmega_tool.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_SwissProt.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_Align_phylip.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/__pycache__/test_GenBank.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ExPASy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Scop.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SVDSuperimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Superimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBMLParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise2_no_C.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Saf
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_TwoBitIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Gfa.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/gene_association.goa_yeast.1.gaf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/goa_human_sample.gpi -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/goa_yeast.gpa.59.gpa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniProt/gp_information.goa_yeast.28.gpi -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniProt
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Xdna/sample-b.xdna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Xdna/sample-a.xdna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Xdna
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_hhr.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/protein_count.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/protein_freq.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/acc_rep_mat.pik -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SubsMat/redAltAADistrib.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SubsMat
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/example_nonstandardannotations.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/cath3.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/globins45.ali -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam2.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/simple.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam3.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam6.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam5.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam1.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam4.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam7.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/example.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/rfam2.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam5.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam4.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/pfam3.seed.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Stockholm/funny.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Stockholm
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/common_BioSQL_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple_short.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/separate.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/equCab1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/separate.xmfa.backbone -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.xmfa.bbcols -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/separate.xmfa.bbcols -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/mm9.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.xmfa.bbcols -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.xmfa.backbone -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.xmfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/combined.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/simple.xmfa.backbone -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Mauve/canFam2.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Mauve
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_UniProt.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_MMCIFParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_align_substitution_matrices.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_SffIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_fasta_m10_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_CEAligner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Affy
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Affy/affy_v4_example.CEL -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Affy
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/7rbx_A_hhsearch_trunc.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhblits_emptytable.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhblits.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/allx.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhblits_onlyheader.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/hhpred_9590198.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/hhsearch_q9bsu1_uniclust_w_ss_pfamA_30.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/4y9h_hhsearch_server_NOssm.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/2uvo_hhsearch.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/HHsuite/4p79_hhsearch_server_NOssm.hhr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/HHsuite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Raf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniGene
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniGene/Hs.2.data -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniGene
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/UniGene/Eca.1.2425.data -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/UniGene
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bigbed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/seq_with_len.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_tag_name.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_checksum.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_segment_fields.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/no_seq.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/fake_gfa2.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_tag_type.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/seq.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/GFA/corrupt_len.gfa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/GFA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Dialign_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Fasttree_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_xml_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_sqlite3_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bigmaf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/SmallPlate_2.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/SmallPlates.csv -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/Plate_2.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/BadPlate.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/phenotype/Plate.json -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/phenotype
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/bam1_sorted.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1_header.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/bam2.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/bam1.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/sam2.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/bam2_sorted.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1_header.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/sam1.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/readme.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SamBam/ex1_refresh.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SamBam
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_cellosaurus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_emboss.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NCBI_BLAST_tools.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KEGG_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Astral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_QCPSuperimposer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_translate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Entrez_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/biosqldb-sqlite.sql -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/cor6_6.db -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/biosqldb-mysql.sql -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BioSQL/biosqldb-pg.sql -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer2_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.long.2bit -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.littleendian.2bit -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TwoBit/sequence.bigendian.2bit -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TwoBit
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/map00950.rea -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.4letter -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/compound.irregular -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko01100.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko00253.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko03070.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.irregular -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/map01100.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/ko00010.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/enzyme.new -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/gene.sample -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/KEGG/map03070.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/KEGG
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_binary_cif.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_ProtParam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PAML_codeml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/sample-e.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/sample-d.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SnapGene/sample-f.dna -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SnapGene
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_EMBL_unittest.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/wrong_version3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/wrong_version2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/protein_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/wrong_version1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/rna_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/corrupt_example3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/version_01_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/corrupt_example2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/corrupt_example1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SeqXML/global_species_example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SeqXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PDBIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/panTro6.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/mm39.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/rn7.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/cow.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/hg38.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/hg38.chrom.sizes -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/rheMac10.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/pig.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/pig.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/ecoli.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/bsubtilis.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/ecoli.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/cow.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Align/bsubtilis.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Align
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5ToPanTro6.over.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5ToPanTro6.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed9.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed3.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed4.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro6.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/balAcu1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed4.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/CAG33136.1.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed4.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed7.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbedtest.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bedExample2.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed7.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/hg38.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_005.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed8.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_002.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed8.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed5.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigbedtest.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_001.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/est.panTro5.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/calJac3ToCalJac4.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/mirna.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_35_002.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_002.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_002.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_003.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/fasta_34.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed3.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.psl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed9.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_002.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/hg19ToHg38.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_002.bed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_005.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/rna.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_35_001.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/rheMac8ToRheMac10.chain -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed6.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/panTro5.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_002.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_001.sam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed12.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_35_001.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bigPsl.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/psl_34_004.psl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/dna_rna.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/bed9.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Blat/pslx_34_004.pslx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Blat
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeuralNetwork
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NeuralNetwork/enolase.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NeuralNetwork
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Dom.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/ExtendedPhylip
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Exposure.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/tmpdirprankmsaKdkCaS
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_codonalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_model.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KGML_graphics_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_NACCESS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/msf
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/msf/DOA_prot.msf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/msf
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c2space.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c3space.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/c2line.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/haplo3.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/haplo2.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/big.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PopGen/haplo.gen -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PopGen
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/paired.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/triple_sff.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_index_at_start.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/greek.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.sff.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/invalid_greek_E3MFGYR02.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads.qual -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_index_in_middle.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/invalid_paired_E3MFGYR02.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_no_manifest.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/triple_sff_rel_paths.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_alt_index_at_end.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_alt_index_at_start.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Roche
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_vectors.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NCBIXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_even_littleendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_odd_littleendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_even.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_even_bigendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nib/test_odd_bigendian.nib -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nib
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/pairwise2_testCases.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PQR.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_CDAO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KeyWList.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_ARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map01100_original.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/labels_default_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_JAGGY.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/scatter_test_7.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_OCTO.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrow_shafts.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_BIGARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_JAGGY.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/scatter_test_1.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map03070_colors.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_JAGGY.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_labels.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/square_test.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/line_graph.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_BIGARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_JAGGY_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_bigarrow_shafts.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/spiral_test.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_linear.svg -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/random_organism.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrows.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/tRNA_chrom_sf.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_BIGARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrows.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigils.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_BIGARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_meth_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_OCTO.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_ARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_OCTO_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrow_shafts_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/labels_default.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_frag_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_JAGGY_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_BIGARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_labels.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_circular.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/multi_bar.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map03070_transparency.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_OCTO.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_OCTO.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_BIGARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map01100_widths.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_JAGGY.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/line_graph_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_meth_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_OCTO_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigils.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_labels_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_ARROW.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/labels_default.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrows_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_by_obj_frag_linear.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_arrow_shafts.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/simple_bar.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_bigarrow_shafts.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_short_ARROW_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map01100_transparency.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/map03070_original.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/tRNA_chrom.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/organism.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigil_long_ARROW.png -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_sigils_c.pdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/GD_region_circular.svg -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/organism.eps -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Graphics/organism.svg -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Graphics
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PQR
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_big.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10.mafindex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_big.mafindex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bundle_without_target.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bundle_without_target.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/length_coords_mismatch.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/bigMaf.as -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/corrupt.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/invalid.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_test.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_bad.mafindex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10.bb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/cnksr3.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_test.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/unfinished.idx -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/ucsc_mm9_chr10_bad.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MAF/humor.maf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MAF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_matplotlib.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_align.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00159.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00546.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00100.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/prosite.excerpt.doc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00144.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00933.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00640.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00149.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00113.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00424.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00340.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00472.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/Doc/pdoc00787.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite/Doc
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00432.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00165.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00107.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Prosite/ps00488.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Prosite
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Selection.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise2.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/loveliesbleeding.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output011.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output009.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/lupine.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/f003.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/dups.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output003.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/f002 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/elderberry.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/lavender.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output002.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster_no_wrap.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/protein_lib.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/tc_out.msf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/nucleotide_m8CB.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output004.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output010.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output015.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output006.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/protein_m8CB.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output016.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/f001 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/centaurea.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output012.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output008.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output014.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/sweetpea.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/phlox.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output001.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster_pearson.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output005.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/nucleotide_lib.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output007.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/output013.m10 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/fa01 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/rose.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/aster_blast.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/wisteria.nu -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/protein_m8CC.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/flowers.pro.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/nucleotide_m8CC.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Fasta/rosemary.pro -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Fasta
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blat_psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Residues.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/CodonUsage
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/CodonUsage/HighlyExpressedGenes.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/CodonUsage
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_bigpsl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_EmbossIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_StructureAlignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_geo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_motifs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GenBank.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Restriction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_igraph.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cellosaurus/cell_lines_2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cellosaurus/cell_lines_1.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Cellosaurus/cell_lines_3.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Cellosaurus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_NibIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_TCoffee_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GenomeDiagram.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM700.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_affy.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM804.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_dual.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_series.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSM691.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_platform.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_family.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/soft_ex_affy_chp.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Geo/GSE16.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Geo
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_HMMGeneral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_phenotype.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/B_nuc.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/Cw_prot.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/DMA_nuc.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NBRF/DMB_prot.pir -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NBRF
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/DD231055_edited.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/DD231055_edited2.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/U87107.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/TRBG361.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/location_wrap.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/AAA03323.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/Human_contigs.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/kipo_prt_sample.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/A04195.imgt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/epo_prt_selection.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/DS830848.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/SC10H5.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/xx_after_co.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/embl_with_0_line.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/AE017046.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/patents.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/101ma_no_coords.embl -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/EMBL/hla_3260_sample.imgt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/EMBL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Disordered.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta7.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta8.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/meta.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/meta2.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta3.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/meta9.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/MetaTool/Meta4.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/MetaTool
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KGML_nographics.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Gck.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NaiveBayes.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/egfr_id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/adh.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl2.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/egfr_pro.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/egfr_nucl.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro3.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro4.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro2.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/pro5.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/drosophila.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl3.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl1.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl4.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/codonalign/nucl5.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/codonalign
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_bgzf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NMR.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_stockholm.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_UniGene.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_TogoWS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_affine_local_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_genome2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_dna2protein_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cdna2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ner.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_est2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_trans_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cigar_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_none.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_trans_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_multiple_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_affine_local.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_dna2protein_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_est2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_dna2protein.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_met_intron_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ner_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_cigar_fshifts2.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_multiple.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_q_multiple_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ner_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cdna2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2genome_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2coding_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_ungapped_trans.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_o_vulgar_fshifts2.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_met_intron_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_revcomp_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_affine_local_cigar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_protein2dna_fshifts.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_24_m_protein2genome_met_intron.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_cdna2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_coding2genome.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Exonerate/exn_22_m_est2genome_vulgar.exn -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Exonerate
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Registry/EDD_RAT.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Registry/seqs.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Registry
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_phylip.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/biosql.ini.appveyor -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_TreeConstruction.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Ace/seq.cap.ace -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Ace/consed_sample.ace -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Ace
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/FSSP
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_mauve.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_EmbossPrimer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/test_Nexus_input.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/codonposset.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/int_node_labels.nwk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/ByteOrderMarkFile.nwk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Nexus/bats.nex -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Nexus
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise_aligner.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/7CFN.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.asa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1AS5.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4CUP.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/dssp_xtra_Sander.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/7CFN_aligned.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/ions.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/lib_10_z_5.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6wg6.bcif.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/3JQH.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.mmtf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Ahmad_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1SSU_mod.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Miller_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4Q9R_min.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4ZHL.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1MOM_min.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1gbt.bcif.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.xyzr -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/occupancy.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1SSU_mod.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1GBT.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4ZHL.mmtf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/disordered.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6WQA.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1LCD.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG_noheader.dssp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2XHE.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2OFG.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Sander_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6WG6.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2XHE.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/6WG6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/d256ba_.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/header.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A8O.rsa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/a_structure.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2n0n_M1.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/2BEG.dssp -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1LCD.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/7DDO.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/Wilke_RASA.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/3jqh.bcif.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1A7G.cif -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/a_structure.pdb -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/3JQH.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/4CUP.mmtf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/alignment_file.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PDB/1GBT.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_KGML_graphics.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Polypeptide.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_QualityIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_seq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Des.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_text.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_Alignment.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_features.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SwissProt.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Medline/pubmed_result1.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Medline/pubmed_result2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Medline
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q13454.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q13639.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P0A186.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/F2CXE6.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/UniRef90_P99999.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/uni002 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P0CK95.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P16235.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P97881.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/F2CXE6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/uni001 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp013 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.rdf -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/R5HY77.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P84001.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/uni003 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q13639.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/Q7Z739.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp012 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/keywlist2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/O95832.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P60904.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P68308.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P39896.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp016 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P62258.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/sp015 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P60137.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/keywlist.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/multi_ex.list -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/README -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/H2CNN8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/H2CNN8.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/O23729.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SwissProt/P04439.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SwissProt
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_parse_pdb_header.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_sam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/pars3.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/strict_refs.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/msa.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/adam_refs.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/nj.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/consensus_refs.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/upgma.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/neighbor_trees.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/majority_ref.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/test.log -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/TreeConstruction/nj_min.tre -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/TreeConstruction
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer2_text_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PAML_yn00.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PAML_baseml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP/scopseq-test
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/dir.hie.scop.txt_test -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/raftest.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/testDom.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/dir.des.scop.txt_test -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/SCOP/dir.cla.scop.txt_test -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/SCOP
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/.coveragerc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_alphafold_db.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Phylo_NeXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_LogisticRegression.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_domtab_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_GraphicsGeneral.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_interproscan_xml.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Tutorial.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Blast_Record.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_blast_tab_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_domtab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqRecord.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SCOP_Cla.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_exonerate_vulgar_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Seq_objs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignInfo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PhyloXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_CAPS.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_HMMCasino.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_prodoc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Emboss.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_FragmentMapper.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Insdc.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Prank_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/msaprobs.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/msaprobs.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/probcons.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/clustalw.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/promals3d.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/temp horses.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/clustalw.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/hedgehog.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/opuntia.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/probcons.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/odd_consensus.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/clustalw.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/kalign.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/kalign.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/protein.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/msaprobs.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/muscle.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/muscle.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/probcons.aln -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/muscle.fa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Clustalw/kalign.a2m -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Clustalw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_nexus.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NMR
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/NMR/noed.xpk -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/NMR
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_SASA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_AlignIO_ClustalIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_MySQLdb_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/out.bam -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_NCBI_qblast.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_UniprotIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BWA/HNSCC1_2_truncated.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/BWA/HNSCC1_1_truncated.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/BWA
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_fasta_m10.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_SnapGene.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_PSEA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/tmpdirprankmsaB3Yyaw
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_sqlite3.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_msf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_clustal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Blast_parser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_Dice.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_fasta.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/bac_find.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle_nobrief_multiple.pair -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse4.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/emboss_pair_aln_full_blank_line.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle_overhang.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/matcher_simple.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/NirK_full.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/NirK.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse2.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/needle_asis.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/cds_forward.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/no_oligo.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/internal_oligo.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/alignret.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/bac_find.psearch -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/water_reverse3.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/matcher_pair.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/cds_reverse.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Emboss/short.primer3 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Emboss
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Entrez.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd_solexa -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd2 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd1 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phd/phd_454 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phd
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqFeature.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Align_exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/phyloxml_examples.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/example.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/bcl_2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/o_tol_332_d_dollo.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/made_up.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/distribution.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/PhyloXML/apaf.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PhyloXML
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/journals.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/nucleotide1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/efetch_pmc.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/efetch_schemas.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/nucleotide2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/taxonomy.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/biosample.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/protein.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/egquery2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/epost2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/epost1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary9.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/epost3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink5.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/egquery1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed3.html -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary8.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/ncbi_mim.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/espell.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch1.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esummary2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch3.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/einfo4.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/esearch7.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/elink6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed6.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Entrez/pubmed2.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Entrez
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_hmmer3_tab.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_mysql_connector.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_codonalign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/seq_tests_common.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PopGen_GenePop_nodepend.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_Xdna.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_005.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_hmmsearch_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b1_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_010.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/README.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_20_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_008.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_21_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_005.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_31b1_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_22_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_31b1_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_011.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_31b1_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_22_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_31b1_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/tab_30_hmmscan_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/domtab_30_hmmscan_004.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_003.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_24_hmmpfam_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b2_phmmer_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_31b1_hmmsearch_001.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_006.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_23_hmmpfam_002.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_007.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Hmmer/text_30_hmmscan_009.out -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Hmmer
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Ace.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Clustalw_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/cac81.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/bamii.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/foki.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/cac81.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/crei.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/pvuii.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/bamii.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/foki.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/taqi.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/pvuii.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/crei.htm -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Rebase/taqi.txt -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Rebase
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_kNN.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/CDAO
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_raxml_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_long_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_diff_ids.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_plus.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_del.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_at_plus.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example_dos.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.qual -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_no_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_original_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_title.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_93.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fasta -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_double_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_escape.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_faked.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_example.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_at_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_faked.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_rna_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_full_range_as_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_seq.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_spaces.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fastq.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example_dos.fastq.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/example.fastq.gz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/solexa_full_range_original_solexa.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/zero_length.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/sanger_full_range_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_as_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/tricky.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_at_seq.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/wrapping_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_trunc_in_qual.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/misc_dna_as_illumina.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/error_qual_unit_sep.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/longreads_original_sanger.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Quality/illumina_faked.fastq -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Quality
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqUtils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Compass/comtest2 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Compass
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_MafIO_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_RCSBFormats.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_BioSQL_mysql_connector_online.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_PdbIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_PDB_DSSP.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/output.best.fas -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/six.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/horses.tree -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/interlaced2.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/five.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/hennigian.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/three.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/sequential.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/four.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/reference_dna.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/horses.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/two.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/one.dat -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/interlaced.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/reference_dna2.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/Phylip/sequential2.phy -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/Phylip
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_phyml_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_pairwise_alignment_map.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SearchIO_exonerate_text_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Muscle_tool.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_SeqXML.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_Affy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Tests/test_SeqIO_AbiIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/InterProScan
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/BioSeqDatabase.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/Loader.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__pycache__/BioSeq.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/BioSeqDatabase.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/py.typed -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/BioSeq.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/Loader.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/BioSQL/DBUtils.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/BioSQL
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/other_trees.xml -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_bibliography.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_phenotype.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_seq_objects.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_phylo.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_testing.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/chapter_entrez.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/Tutorial/index.rst -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/Tutorial
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/PF05371_seed.sth -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ls_orchid.gbk.bgz -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Doc/examples/ls_orchid.gbk.bz2 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Doc/examples/nmr
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_Muscle.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/_Mafft.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_MSAProbs.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Dialign.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Probcons.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Clustalw.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Prank.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_Mafft.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/Applications/_TCoffee.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/Applications
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/maf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bigpsl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/msf.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/AlignInfo.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/clustal.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/fasta.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_codonaligner.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/hhr.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bigbed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/bed.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/psl.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/exonerate.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/analysis.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/chain.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/sam.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/GENETIC -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/DAYHOFF -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM50 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM90 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/PAM30 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/PAM70 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/RAO -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM62 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BENNER74 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/MDM78 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/RISLER -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/JOHNSON -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLASTN -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/NUC.4.4 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/GONNET1992 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/LEVIN -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLASTP -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BENNER22 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/MCLACHLAN -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM80 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/SCHNEIDER -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/HOXD70 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BLOSUM45 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/FENG -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/MEGABLAST -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/BENNER6 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/PAM250 -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/substitution_matrices/data/JONES -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align/substitution_matrices/data
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Align
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/LargeFileParser.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/GenePop/EasyController.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen/GenePop
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PopGen/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PopGen
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/SnapGeneIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/QualityIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/XdnaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/AbiIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/TabIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/NibIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/GckIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/SwissIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/PirIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/SnapGeneIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/PhdIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/SffIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/PdbIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/Interfaces.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/GfaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/TwoBitIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/IgIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/InsdcIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/AceIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/QualityIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/UniprotIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/SeqXmlIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/FastaIO.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/TwoBitIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/PhdIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/SffIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/InsdcIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/PirIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/Interfaces.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/GckIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/NibIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/AbiIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/_index.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/GfaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/UniprotIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/SeqXmlIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/PdbIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/FastaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/IgIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/XdnaIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/SwissIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/AceIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/_twoBitIO.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqIO/TabIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqIO
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/MaxEntropy.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/CheckSum.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/lcc.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/ProtParam.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/SeqUtils/__pycache__/IsoelectricPoint.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqUtils/__pycache__
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/GenomeDiagram/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics/GenomeDiagram
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/BasicChromosome.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Graphics/DisplayRepresentation.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Graphics
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Restriction/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Restriction
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/MarkovModel.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/SCADIO.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/vectors.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/ic_rebuild.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Atom.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Selection.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/MMCIFParser.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/NeighborSearch.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/__pycache__/Chain.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/__pycache__
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/kdtrees.c -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/PDBExceptions.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/Dice.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/AbstractPropertyMap.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/alphafold_db.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/PDB/SASA.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB
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creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/mmtf
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-format1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/OMSSA.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_all.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/archivecustom-classes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/HomoloGene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/math.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_180601.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/format.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isogrk2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PubMed.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamso.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/BITS-embedded-index2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eSpell.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esummary_clinvar.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-funding1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/ePost_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PIR_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-articlemeta1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/archivecustom-mixes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isogrk4.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Submit.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esearch.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/default-mixes.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isoamsa.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isobox.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/xhtml-table-1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_090101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_130501.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-common1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-related-object1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-xmlspecchars1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathmlsetup.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/SP_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-display1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/htmltable.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-backmatter1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/common.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isomfrk.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PIR_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_110101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-mathml3-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathml3-qname1.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-link1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/para.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PRF_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/xmlspecchars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB_Features.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_100301.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/BITS-question-answer2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/elink_020122.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isocyr1.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-modules1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-para1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isocyr2.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NSE.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PDB_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/mathml3.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_180101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/einfo.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isotech.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/eSearch_020511.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isogrk3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/MMDB.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/egquery.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/taxon.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_TxInit.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/chars.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_General.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-ali-namespace1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/PRF_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/pubmed_020114.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/esummary-v1.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqres.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/JATS-default-mixes1-3.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isodia.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/isomopf.ent -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/DTDs
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copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/HMM/Trainer.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data
creating /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/PDBData.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/IUPACData.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/CodonTable.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__pycache__
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/CodonTable.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/IUPACData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/__init__.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data
copying /build/reproducible-path/python-biopython-1.85+dfsg/.pybuild/cpython3_3.13/build/Bio/Data/PDBData.py -> /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_tab_index.py to test_SearchIO_hmmer3_tab_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Probcons_tool.py to test_Probcons_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Enzyme.py to test_Enzyme.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_maf.py to test_Align_maf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_PhylipIO.py to test_AlignIO_PhylipIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBList.py to test_PDB_PDBList.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/PAML/gen_results.py to gen_results.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_convert.py to test_AlignIO_convert.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_SMCRA.py to test_PDB_SMCRA.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO.py to test_AlignIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_CodonTable.py to test_CodonTable.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Compass.py to test_Compass.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Pathway.py to test_Pathway.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blat_psl_index.py to test_SearchIO_blat_psl_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Mafft_tool.py to test_Mafft_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Entrez_parser.py to test_Entrez_parser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_psycopg2_online.py to test_BioSQL_psycopg2_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ClustalOmega_tool.py to test_ClustalOmega_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_FastaIO.py to test_AlignIO_FastaIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Application.py to test_Application.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_tabular.py to test_Align_tabular.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_samtools_tool.py to test_samtools_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ExPASy.py to test_ExPASy.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Scop.py to test_SCOP_Scop.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SVDSuperimposer.py to test_SVDSuperimposer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Superimposer.py to test_PDB_Superimposer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBMLParser.py to test_PDB_PDBMLParser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise2_no_C.py to test_pairwise2_no_C.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_TwoBitIO.py to test_SeqIO_TwoBitIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Gfa.py to test_SeqIO_Gfa.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_hhr.py to test_Align_hhr.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Hie.py to test_SCOP_Hie.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_prosite.py to test_prosite.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBParser.py to test_PDB_PDBParser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KEGG.py to test_KEGG.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/common_BioSQL_online.py to common_BioSQL_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bed.py to test_Align_bed.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_UniProt.py to test_UniProt.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_MarkovModel.py to test_MarkovModel.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_MMCIFParser.py to test_PDB_MMCIFParser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_align_substitution_matrices.py to test_align_substitution_matrices.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_SffIO.py to test_SeqIO_SffIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_fasta_m10_index.py to test_SearchIO_fasta_m10_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_CEAligner.py to test_PDB_CEAligner.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_tab.py to test_SearchIO_blast_tab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Raf.py to test_SCOP_Raf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bigbed.py to test_Align_bigbed.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_xml.py to test_SearchIO_blast_xml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Dialign_tool.py to test_Dialign_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Fasttree_tool.py to test_Fasttree_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_xml_index.py to test_SearchIO_blast_xml_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_sqlite3_online.py to test_BioSQL_sqlite3_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bigmaf.py to test_Align_bigmaf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_cellosaurus.py to test_cellosaurus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_emboss.py to test_Align_emboss.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NCBI_BLAST_tools.py to test_NCBI_BLAST_tools.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KEGG_online.py to test_KEGG_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Astral.py to test_SCOP_Astral.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_QCPSuperimposer.py to test_PDB_QCPSuperimposer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_translate.py to test_translate.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Entrez_online.py to test_Entrez_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer2_text.py to test_SearchIO_hmmer2_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_binary_cif.py to test_PDB_binary_cif.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ProtParam.py to test_ProtParam.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PAML_codeml.py to test_PAML_codeml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_EMBL_unittest.py to test_EMBL_unittest.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PDBIO.py to test_PDB_PDBIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Dom.py to test_SCOP_Dom.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Exposure.py to test_PDB_Exposure.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_psl.py to test_Align_psl.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_codonalign.py to test_Align_codonalign.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_model.py to test_SearchIO_model.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KGML_graphics_online.py to test_KGML_graphics_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_NACCESS.py to test_PDB_NACCESS.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_vectors.py to test_PDB_vectors.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NCBIXML.py to test_NCBIXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_networkx.py to test_Phylo_networkx.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_KDTree.py to test_PDB_KDTree.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/pairwise2_testCases.py to pairwise2_testCases.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PQR.py to test_PQR.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Consensus.py to test_Consensus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_ColorSpiral.py to test_ColorSpiral.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO.py to test_SeqIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_CDAO.py to test_Phylo_CDAO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_MMCIFIO.py to test_PDB_MMCIFIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KeyWList.py to test_KeyWList.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_a2m.py to test_Align_a2m.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_UniProt_GOA.py to test_UniProt_GOA.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_internal_coords.py to test_PDB_internal_coords.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_motifs_online.py to test_motifs_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_File.py to test_File.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/search_tests_common.py to search_tests_common.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/common_BioSQL.py to common_BioSQL.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BWA_tool.py to test_BWA_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/run_tests.py to run_tests.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Medline.py to test_Medline.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Cluster.py to test_Cluster.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_MMCIF2Dict.py to test_PDB_MMCIF2Dict.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_phenotype_fit.py to test_phenotype_fit.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_write.py to test_SearchIO_write.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GraphicsDistribution.py to test_GraphicsDistribution.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_matplotlib.py to test_Phylo_matplotlib.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_align.py to test_align.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Selection.py to test_PDB_Selection.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise2.py to test_pairwise2.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo.py to test_Phylo.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blat_psl.py to test_SearchIO_blat_psl.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Residues.py to test_SCOP_Residues.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_bigpsl.py to test_Align_bigpsl.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_EmbossIO.py to test_AlignIO_EmbossIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_StructureAlignment.py to test_PDB_StructureAlignment.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_geo.py to test_geo.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_motifs.py to test_motifs.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GenBank.py to test_GenBank.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Restriction.py to test_Restriction.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_igraph.py to test_Phylo_igraph.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_exonerate.py to test_SearchIO_exonerate.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_NibIO.py to test_SeqIO_NibIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_TCoffee_tool.py to test_TCoffee_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GenomeDiagram.py to test_GenomeDiagram.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Nexus.py to test_Nexus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_HMMGeneral.py to test_HMMGeneral.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_phenotype.py to test_phenotype.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Disordered.py to test_PDB_Disordered.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KGML_nographics.py to test_KGML_nographics.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Gck.py to test_SeqIO_Gck.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NaiveBayes.py to test_NaiveBayes.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_bgzf.py to test_bgzf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NMR.py to test_NMR.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_stockholm.py to test_Align_stockholm.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_UniGene.py to test_UniGene.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_TogoWS.py to test_TogoWS.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_phylip.py to test_Align_phylip.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_TreeConstruction.py to test_TreeConstruction.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_mauve.py to test_Align_mauve.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_EmbossPrimer.py to test_EmbossPrimer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_pairwise_aligner.py to test_pairwise_aligner.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_KGML_graphics.py to test_KGML_graphics.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Polypeptide.py to test_PDB_Polypeptide.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_FastaIO.py to test_SeqIO_FastaIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_QualityIO.py to test_SeqIO_QualityIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_seq.py to test_seq.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Des.py to test_SCOP_Des.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_text.py to test_SearchIO_hmmer3_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_Alignment.py to test_Align_Alignment.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_chain.py to test_Align_chain.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_features.py to test_SeqIO_features.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SwissProt.py to test_SwissProt.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_parse_pdb_header.py to test_PDB_parse_pdb_header.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_sam.py to test_Align_sam.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer2_text_index.py to test_SearchIO_hmmer2_text_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PAML_yn00.py to test_PAML_yn00.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PAML_baseml.py to test_PAML_baseml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_alphafold_db.py to test_PDB_alphafold_db.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Phylo_NeXML.py to test_Phylo_NeXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_LogisticRegression.py to test_LogisticRegression.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_domtab_index.py to test_SearchIO_hmmer3_domtab_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_GraphicsGeneral.py to test_GraphicsGeneral.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_interproscan_xml.py to test_SearchIO_interproscan_xml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Tutorial.py to test_Tutorial.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Blast_Record.py to test_Blast_Record.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_blast_tab_index.py to test_SearchIO_blast_tab_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_domtab.py to test_SearchIO_hmmer3_domtab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqRecord.py to test_SeqRecord.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SCOP_Cla.py to test_SCOP_Cla.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_exonerate_vulgar_index.py to test_SearchIO_exonerate_vulgar_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Seq_objs.py to test_Seq_objs.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignInfo.py to test_AlignInfo.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PhyloXML.py to test_PhyloXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_CAPS.py to test_CAPS.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_HMMCasino.py to test_HMMCasino.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_prodoc.py to test_prodoc.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Emboss.py to test_Emboss.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_FragmentMapper.py to test_PDB_FragmentMapper.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Insdc.py to test_SeqIO_Insdc.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Prank_tool.py to test_Prank_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_nexus.py to test_Align_nexus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_SASA.py to test_PDB_SASA.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_AlignIO_ClustalIO.py to test_AlignIO_ClustalIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_MySQLdb_online.py to test_BioSQL_MySQLdb_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_NCBI_qblast.py to test_NCBI_qblast.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_UniprotIO.py to test_SeqIO_UniprotIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_fasta_m10.py to test_SearchIO_fasta_m10.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_SnapGene.py to test_SeqIO_SnapGene.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_online.py to test_SeqIO_online.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_PSEA.py to test_PDB_PSEA.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_sqlite3.py to test_BioSQL_sqlite3.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_msf.py to test_Align_msf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_clustal.py to test_Align_clustal.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Blast_parser.py to test_Blast_parser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PDB_Dice.py to test_PDB_Dice.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_fasta.py to test_Align_fasta.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Entrez.py to test_Entrez.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqFeature.py to test_SeqFeature.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Align_exonerate.py to test_Align_exonerate.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_tab.py to test_SearchIO_hmmer3_tab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_BioSQL_mysql_connector.py to test_BioSQL_mysql_connector.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_codonalign.py to test_codonalign.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/seq_tests_common.py to seq_tests_common.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_PopGen_GenePop_nodepend.py to test_PopGen_GenePop_nodepend.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_Xdna.py to test_SeqIO_Xdna.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Ace.py to test_Ace.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SeqIO_index.py to test_SeqIO_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Clustalw_tool.py to test_Clustalw_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_kNN.py to test_kNN.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_raxml_tool.py to test_raxml_tool.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_SearchIO_hmmer3_text_index.py to test_SearchIO_hmmer3_text_index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Tests/test_Chi2.py to test_Chi2.cpython-313.pyc
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byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/PSEA.py to PSEA.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/DSSP.py to DSSP.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Atom.py to Atom.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/ic_data.py to ic_data.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Model.py to Model.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/internal_coords.py to internal_coords.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/cealign.py to cealign.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/PDB/Selection.py to Selection.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Phd.py to Phd.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Sequencing/Ace.py to Ace.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Medline/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt/KeyWList.py to KeyWList.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SwissProt/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/chi2.py to chi2.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/codeml.py to codeml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/yn00.py to yn00.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/_paml.py to _paml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PAML/baseml.py to baseml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NeXML.py to NeXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/CDAOIO.py to CDAOIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Newick.py to Newick.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/_utils.py to _utils.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/Consensus.py to Consensus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NexusIO.py to NexusIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/CDAO.py to CDAO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/NewickIO.py to NewickIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/PhyloXML.py to PhyloXML.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/_io.py to _io.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Phylo/BaseTree.py to BaseTree.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Cla.py to Cla.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Dom.py to Dom.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Raf.py to Raf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Residues.py to Residues.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Hie.py to Hie.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SCOP/Des.py to Des.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/cellosaurus.py to cellosaurus.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/Prosite.py to Prosite.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/Enzyme.py to Enzyme.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/Prodoc.py to Prodoc.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/NOEtools.py to NOEtools.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NMR/xpktools.py to xpktools.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/NaiveBayes.py to NaiveBayes.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/pairwise2.py to pairwise2.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/Primer3.py to Primer3.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Emboss/Applications.py to Applications.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py to hhsuite2_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/hsp.py to hsp.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/_base.py to _base.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/query.py to query.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_model/hit.py to hit.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_utils.py to _utils.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/_index.py to _index.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlatIO.py to BlatIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/_base.py to _base.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/FastaIO.py to FastaIO.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py to interproscan_xml.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SearchIO/InterproscanIO/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Entrez/Parser.py to Parser.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/CAPS/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/bgzf.py to bgzf.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Application/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Compass/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/SeqRecord.py to SeqRecord.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/LogisticRegression.py to LogisticRegression.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/Utilities.py to Utilities.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/MarkovModel.py to MarkovModel.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/HMM/Trainer.py to Trainer.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/CodonTable.py to CodonTable.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/IUPACData.py to IUPACData.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/__init__.py to __init__.cpython-313.pyc
byte-compiling /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/Bio/Data/PDBData.py to PDBData.cpython-313.pyc
running install_egg_info
Copying biopython.egg-info to /build/reproducible-path/python-biopython-1.85+dfsg/debian/tmp/usr/lib/python3.13/dist-packages/biopython-1.85.egg-info
Skipping SOURCES.txt
running install_scripts
dh_numpy3 -ppython3-biopython
Possible precedence issue with control flow operator (return) at /usr/bin/dh_numpy3 line 57.
Can't stat debian/python3-biopython: No such file or directory
at /usr/bin/dh_numpy3 line 85.
dh_numpy3: warning: skipping binary package python3-biopython which does not depend on the NumPy C ABI
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_install -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython//usr/lib/python3.13/dist-packages
cp --reflink=auto -a debian/tmp/usr/lib/python3.13/dist-packages/Bio debian/tmp/usr/lib/python3.13/dist-packages/biopython-1.85.egg-info debian/python3-biopython//usr/lib/python3.13/dist-packages/
install -m0755 -d debian/python3-biopython-sql//usr/lib/python3.13/dist-packages
cp --reflink=auto -a debian/tmp/usr/lib/python3.13/dist-packages/BioSQL debian/python3-biopython-sql//usr/lib/python3.13/dist-packages/
rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log debian/python3-biopython.debhelper.log
debian/rules override_dh_installdocs-indep
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_installdocs -i
dh_installdocs: warning: Cannot auto-detect main package for python-biopython-doc. If the default is wrong, please use --doc-main-package
install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc
install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc
cd './Doc/_build/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc
cp --reflink=auto -a ./debian/README.test debian/python-biopython-doc/usr/share/doc/python-biopython-doc
cp --reflink=auto -a ./debian/tests/run-unit-test debian/python-biopython-doc/usr/share/doc/python-biopython-doc
cd './debian/Tests_fixme/..' && find 'Tests_fixme' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc
chmod -R u\+rw,go=rX debian/python-biopython-doc/usr/share/doc
install -p -m0644 debian/copyright debian/python-biopython-doc/usr/share/doc/python-biopython-doc/copyright
install -m0755 -d debian/python-biopython-doc/usr/share/doc-base/
install -p -m0644 debian/python-biopython-doc.doc-base debian/python-biopython-doc/usr/share/doc-base/python-biopython-doc.biopython-tutorial
install -m0755 -d debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql
install -p -m0644 debian/copyright debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/copyright
find debian -name __pycache__ -type d | xargs rm -rf
# dh_installdocs seems to refuse copying zero length files (for
# instance Tests/Blast/tab_2226_tblastn_002.txt) but these are
# needed for the tests as well
cp -a debian/tmp_tests/* /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc
# Tackle privacy breaches caused by MathML.
sed -i 's@https://cdn.jsdelivr.net/npm/mathjax\@3/es5/tex-mml-chtml.js@file:///usr/share/nodejs/mathjax-full/es5/tex-mml-chtml.js@' \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/Tutorial/*.html \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/index.html
# Clean fonts that made their way to the documentation package.
rm -rvf /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Bold.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-BoldItalic.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.svg'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Regular.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/RobotoSlab-Regular.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/RobotoSlab-Bold.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Italic.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Regular.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.eot'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Italic.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.woff'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-BoldItalic.woff2'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/fontawesome-webfont.ttf'
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/Lato-Bold.woff2'
removed directory '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/fonts/'
# Use Debian provided Javascript files.
rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js'
ln -sv /usr/share/javascript/jquery/jquery.js \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js
'/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js' -> '/usr/share/javascript/jquery/jquery.js'
rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js'
ln -sv /usr/share/javascript/sphinxdoc/1.0/doctools.js \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js
'/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js' -> '/usr/share/javascript/sphinxdoc/1.0/doctools.js'
rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js'
ln -sv /usr/share/javascript/sphinxdoc/1.0/language_data.js \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js
'/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js' -> '/usr/share/javascript/sphinxdoc/1.0/language_data.js'
rm -v /build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js
removed '/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js'
ln -sv /usr/share/javascript/sphinxdoc/1.0/searchtools.js \
/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js
'/build/reproducible-path/python-biopython-1.85+dfsg/debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js' -> '/usr/share/javascript/sphinxdoc/1.0/searchtools.js'
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_installdocs -O--buildsystem=pybuild -Npython-biopython-doc -Npython3-biopython-sql
install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython
install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython
cp --reflink=auto -a ./CONTRIB.rst debian/python3-biopython/usr/share/doc/python3-biopython
cp --reflink=auto -a ./CONTRIBUTING.rst debian/python3-biopython/usr/share/doc/python3-biopython
cp --reflink=auto -a ./DEPRECATED.rst debian/python3-biopython/usr/share/doc/python3-biopython
cp --reflink=auto -a ./NEWS.rst debian/python3-biopython/usr/share/doc/python3-biopython
chmod -R u\+rw,go=rX debian/python3-biopython/usr/share/doc
install -p -m0644 debian/README.Debian debian/python3-biopython/usr/share/doc/python3-biopython/README.Debian
install -p -m0644 debian/TODO debian/python3-biopython/usr/share/doc/python3-biopython/TODO.Debian
install -p -m0644 debian/copyright debian/python3-biopython/usr/share/doc/python3-biopython/copyright
dh_installchangelogs -O--buildsystem=pybuild
install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc
install -p -m0644 debian/.debhelper/generated/python-biopython-doc/dh_installchangelogs.dch.trimmed debian/python-biopython-doc/usr/share/doc/python-biopython-doc/changelog.Debian
install -p -m0644 debian/.debhelper/generated/python-biopython-doc/dh_installchangelogs.news.trimmed debian/python-biopython-doc/usr/share/doc/python-biopython-doc/NEWS.Debian
install -m0755 -d debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql
install -p -m0644 debian/.debhelper/generated/python3-biopython-sql/dh_installchangelogs.dch.trimmed debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/changelog.Debian
install -p -m0644 debian/.debhelper/generated/python3-biopython-sql/dh_installchangelogs.news.trimmed debian/python3-biopython-sql/usr/share/doc/python3-biopython-sql/NEWS.Debian
install -m0755 -d debian/python3-biopython/usr/share/doc/python3-biopython
install -p -m0644 debian/.debhelper/generated/python3-biopython/dh_installchangelogs.dch.trimmed debian/python3-biopython/usr/share/doc/python3-biopython/changelog.Debian
install -p -m0644 debian/.debhelper/generated/python3-biopython/dh_installchangelogs.news.trimmed debian/python3-biopython/usr/share/doc/python3-biopython/NEWS.Debian
dh_installexamples -O--buildsystem=pybuild
dh_installexamples: warning: Cannot auto-detect main package for python-biopython-doc. If the default is wrong, please use --doc-main-package
install -m0755 -d debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ACT_example.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/alpha.faa debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/beta.faa debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/clustal_run.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ec_5.4.2.2.txt debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/fasta_dictionary.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/fasta_iterator.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.fasta debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk.bgz debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk.bz2 debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/ls_orchid.gbk.gz debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/m_cold.fasta debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/my_blast.xml debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/my_blat.psl debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/nmr debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/opuntia.aln debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/opuntia.dnd debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/opuntia.fasta debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/PF05371_seed.sth debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/Plates.csv debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/Proux_et_al_2002_Figure_6.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/simple.dnd debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/swissprot.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
cp --reflink=auto -a ./Doc/examples/www_blast.py debian/python-biopython-doc/usr/share/doc/python-biopython-doc/examples
dh_python3 -O--buildsystem=pybuild
D: dh_python3 dh_python3:180: version: 6.20250108
D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild']
D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild'])
D: dh_python3 dh_python3:183: supported Python versions: 3.13 (default=3.13)
D: dh_python3 debhelper:166: skipping package python-biopython-doc (missing ${python3:Depends} in Depends/Recommends)
D: dh_python3 debhelper:174: source=python-biopython, binary packages=['python3-biopython', 'python3-biopython-sql']
D: dh_python3 dh_python3:205: processing package python3-biopython...
D: dh_python3 fs:50: moving files from debian/python3-biopython/usr/lib/python3.13/dist-packages to debian/python3-biopython/usr/lib/python3/dist-packages/
D: dh_python3 fs:338: package python3-biopython details = {'requires.txt': {'debian/python3-biopython/usr/lib/python3/dist-packages/biopython-1.85.egg-info/requires.txt'}, 'egg-info': {'debian/python3-biopython/usr/lib/python3/dist-packages/biopython-1.85.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.13')}, 'ext_no_version': set()}
D: dh_python3 depends:103: generating dependencies for package python3-biopython
D: dh_python3 pydist:175: trying to find dependency for numpy (python=None)
D: dh_python3 pydist:209: dependency: module seems to be installed
D: dh_python3 pydist:284: dependency: included in build-deps
D: dh_python3 depends:253: D={'python3:any', 'python3-numpy', 'python3 (<< 3.14)', 'python3 (>= 3.13~)'}; R=[]; S=[]; E=[], B=[]; RT=[]
D: dh_python3 dh_python3:205: processing package python3-biopython-sql...
D: dh_python3 fs:50: moving files from debian/python3-biopython-sql/usr/lib/python3.13/dist-packages to debian/python3-biopython-sql/usr/lib/python3/dist-packages/
D: dh_python3 fs:338: package python3-biopython-sql details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()}
D: dh_python3 depends:103: generating dependencies for package python3-biopython-sql
D: dh_python3 depends:253: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[]
dh_installsystemduser -O--buildsystem=pybuild
dh_lintian -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/usr/share/lintian/overrides
install -p -m0644 debian/python3-biopython.lintian-overrides debian/python3-biopython/usr/share/lintian/overrides/python3-biopython
install -m0755 -d debian/python-biopython-doc/usr/share/lintian/overrides
install -p -m0644 debian/python-biopython-doc.lintian-overrides debian/python-biopython-doc/usr/share/lintian/overrides/python-biopython-doc
dh_perl -O--buildsystem=pybuild
dh_link -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs
rm -f debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd
ln -s ../../../../../../share/xml/w3c-sgml-lib/schema/dtd/XX-MathML2-20031104/mathml2.dtd debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd
rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js
ln -s ../../../../javascript/jquery/jquery.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/jquery.js
rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js
ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/language_data.js
rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js
ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/searchtools.js
rm -f debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js
ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/doctools.js
dh_strip_nondeterminism -O--buildsystem=pybuild
Using 1738853069 as canonical time
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/file.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_static/minus.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/dot_plot.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/GD_sigils.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/PSIBlastRecord.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/SRR001666.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/three_track_cl2a.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/tRNA_chrom.png using File::StripNondeterminism::handlers::png
Normalizing debian/python-biopython-doc/usr/share/doc/python-biopython-doc/html/_images/1a8o-ca-plot.png using File::StripNondeterminism::handlers::png
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dh_compress -O--buildsystem=pybuild
cd debian/python3-biopython
cd debian/python-biopython-doc
cd debian/python3-biopython-sql
chmod a-x usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian
chmod a-x usr/share/doc/python3-biopython-sql/NEWS.Debian usr/share/doc/python3-biopython-sql/changelog.Debian
gzip -9nf usr/share/doc/python3-biopython/CONTRIB.rst usr/share/doc/python3-biopython/DEPRECATED.rst usr/share/doc/python3-biopython/NEWS.Debian usr/share/doc/python3-biopython/NEWS.rst usr/share/doc/python3-biopython/changelog.Debian
chmod a-x usr/share/doc/python-biopython-doc/NEWS.Debian usr/share/doc/python-biopython-doc/Tests/Abi/310.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3100.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/3730.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/A6_1-DB3.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/empty.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/no_smpl1.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/nonascii_encoding.ab1 usr/share/doc/python-biopython-doc/Tests/Abi/test.fsa usr/share/doc/python-biopython-doc/Tests/Abi/test_data usr/share/doc/python-biopython-doc/Tests/Ace/consed_sample.ace usr/share/doc/python-biopython-doc/Tests/Ace/contig1.ace usr/share/doc/python-biopython-doc/Tests/Ace/seq.cap.ace usr/share/doc/python-biopython-doc/Tests/Align/cow.fa usr/share/doc/python-biopython-doc/Tests/Align/hg38.chrom.sizes usr/share/doc/python-biopython-doc/Tests/Align/pig.fa usr/share/doc/python-biopython-doc/Tests/BWA/HNSCC1_1_truncated.fastq 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cd '/build/reproducible-path/python-biopython-1.85+dfsg'
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cd '/build/reproducible-path/python-biopython-1.85+dfsg'
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usr/share/doc/python-biopython-doc/Tests/test_SeqUtils.py usr/share/doc/python-biopython-doc/Tests/test_Seq_objs.py usr/share/doc/python-biopython-doc/Tests/test_SwissProt.py usr/share/doc/python-biopython-doc/Tests/test_TCoffee_tool.py usr/share/doc/python-biopython-doc/Tests/test_TogoWS.py usr/share/doc/python-biopython-doc/Tests/test_TreeConstruction.py usr/share/doc/python-biopython-doc/Tests/test_Tutorial.py usr/share/doc/python-biopython-doc/Tests/test_UniGene.py usr/share/doc/python-biopython-doc/Tests/test_UniProt_GOA.py usr/share/doc/python-biopython-doc/Tests/test_align.py usr/share/doc/python-biopython-doc/Tests/test_align_substitution_matrices.py usr/share/doc/python-biopython-doc/Tests/test_bgzf.py usr/share/doc/python-biopython-doc/Tests/test_cellosaurus.py usr/share/doc/python-biopython-doc/Tests/test_codonalign.py usr/share/doc/python-biopython-doc/Tests/test_geo.py usr/share/doc/python-biopython-doc/Tests/test_motifs.py usr/share/doc/python-biopython-doc/Tests/test_pairwise_aligner.py usr/share/doc/python-biopython-doc/Tests/test_pairwise_alignment_map.py usr/share/doc/python-biopython-doc/Tests/test_phenotype.py usr/share/doc/python-biopython-doc/Tests/test_prodoc.py usr/share/doc/python-biopython-doc/Tests/test_prosite.py usr/share/doc/python-biopython-doc/Tests/test_samtools_tool.py usr/share/doc/python-biopython-doc/Tests/test_seq.py usr/share/doc/python-biopython-doc/Tests_avoid/test_EmbossPhylipNew.py usr/share/doc/python-biopython-doc/Tests_avoid/test_GraphicsBitmaps.py usr/share/doc/python-biopython-doc/Tests_avoid/test_MSAProbs_tool.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PAML_tools.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PDB_ResidueDepth.py usr/share/doc/python-biopython-doc/Tests_avoid/test_PopGen_GenePop_EasyController.py usr/share/doc/python-biopython-doc/Tests_avoid/test_XXmotif_tool.py usr/share/doc/python-biopython-doc/Tests_avoid/test_mmtf.py usr/share/doc/python-biopython-doc/changelog.Debian
cd '/build/reproducible-path/python-biopython-1.85+dfsg'
rm -f debian/python-biopython-doc.debhelper.log debian/python3-biopython-sql.debhelper.log
debian/rules override_dh_fixperms
make[1]: Entering directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_fixperms
find debian/python3-biopython ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python-biopython-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python3-biopython-sql ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/python3-biopython-sql/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython-sql/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython-sql/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python3-biopython/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biopython/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python3-biopython-sql -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython-sql/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian/python-biopython-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biopython-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python3-biopython/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w
find debian/python-biopython-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/python-biopython-doc/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/python-biopython-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian -name "*.dtd" -exec chmod -x \{\} \;
chmod: cannot operate on dangling symlink 'debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Entrez/DTDs/mathml2.dtd'
make[1]: Leaving directory '/build/reproducible-path/python-biopython-1.85+dfsg'
dh_missing -O--buildsystem=pybuild
dh_dwz -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu
dwz -mdebian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug -- debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so
objcopy --compress-debug-sections debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug
chmod 0644 -- debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-biopython.debug
dh_strip -a -O--buildsystem=pybuild
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/bf0f167132b8d542ccf9bc2e3c17dfb77030a9.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/bf0f167132b8d542ccf9bc2e3c17dfb77030a9.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/31/bf0f167132b8d542ccf9bc2e3c17dfb77030a9.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0b
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0b/824aafb0f7abc96dad45a12e5d22fbd2d5b8dc.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0b/824aafb0f7abc96dad45a12e5d22fbd2d5b8dc.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/0b/824aafb0f7abc96dad45a12e5d22fbd2d5b8dc.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/69d17deb1b17ad018c2a36ad9bc72ef7955da7.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/69d17deb1b17ad018c2a36ad9bc72ef7955da7.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/69d17deb1b17ad018c2a36ad9bc72ef7955da7.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bd
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bd/d3ee90e8e7210b86998bec239310c13d727b57.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bd/d3ee90e8e7210b86998bec239310c13d727b57.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/bd/d3ee90e8e7210b86998bec239310c13d727b57.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ca
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ca/9ab834ef79752b37ed7343a36a1c19b78b2b86.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ca/9ab834ef79752b37ed7343a36a1c19b78b2b86.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ca/9ab834ef79752b37ed7343a36a1c19b78b2b86.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/7e
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/7e/b58f33de838fdb083e46d6e8d6f1f5d77f6ab5.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/7e/b58f33de838fdb083e46d6e8d6f1f5d77f6ab5.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/7e/b58f33de838fdb083e46d6e8d6f1f5d77f6ab5.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/b6d680850259b8cf3cb7658552bbfbf8e65335.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/b6d680850259b8cf3cb7658552bbfbf8e65335.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/e9/b6d680850259b8cf3cb7658552bbfbf8e65335.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/5a
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/5a/d294f1653b8bd9941cde9a9db7b85323d6e1a1.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/5a/d294f1653b8bd9941cde9a9db7b85323d6e1a1.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/5a/d294f1653b8bd9941cde9a9db7b85323d6e1a1.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8e
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8e/4659d63064e8d015ba678f7ee4e1f71c6dc5ca.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8e/4659d63064e8d015ba678f7ee4e1f71c6dc5ca.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/8e/4659d63064e8d015ba678f7ee4e1f71c6dc5ca.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ed
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ed/32f9799898593049253f082736071d9df8dee9.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ed/32f9799898593049253f082736071d9df8dee9.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/ed/32f9799898593049253f082736071d9df8dee9.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/a3
objcopy --only-keep-debug --compress-debug-sections debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/a3/0ac2f11d9e5546e3499dbf8e90360739145546.debug
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/a3/0ac2f11d9e5546e3499dbf8e90360739145546.debug
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so
objcopy --add-gnu-debuglink debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.build-id/a3/0ac2f11d9e5546e3499dbf8e90360739145546.debug debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz
cp --reflink=auto -a debian/python3-biopython/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/python3-biopython/dbgsym-root/usr/lib/debug/.dwz
rm -fr debian/python3-biopython/usr/lib/debug/.dwz
rmdir -p --ignore-fail-on-non-empty debian/python3-biopython/usr/lib/debug
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc
ln -s python3-biopython debian/.debhelper/python3-biopython/dbgsym-root/usr/share/doc/python3-biopython-dbgsym
install -m0755 -d debian/.debhelper/python3-biopython
dh_makeshlibs -a -O--buildsystem=pybuild
rm -f debian/python3-biopython/DEBIAN/shlibs
dh_shlibdeps -a -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/DEBIAN
dpkg-shlibdeps -Tdebian/python3-biopython.substvars debian/python3-biopython/usr/lib/python3/dist-packages/Bio/cpairwise2.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/motifs/_pwm.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Cluster/_cluster.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_aligncore.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_codonaligner.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Align/_pairwisealigner.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/SeqIO/_twoBitIO.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/Nexus/cnexus.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/_bcif_helper.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/kdtrees.cpython-313-x86_64-linux-gnu.so debian/python3-biopython/usr/lib/python3/dist-packages/Bio/PDB/ccealign.cpython-313-x86_64-linux-gnu.so
dh_installdeb -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython/DEBIAN
printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/postinst
cat debian/python3-biopython.postinst.debhelper >> debian/python3-biopython/DEBIAN/postinst
chmod 0755 -- debian/python3-biopython/DEBIAN/postinst
printf '#!/bin/sh\nset -e\n' > debian/python3-biopython/DEBIAN/prerm
cat debian/python3-biopython.prerm.debhelper >> debian/python3-biopython/DEBIAN/prerm
chmod 0755 -- debian/python3-biopython/DEBIAN/prerm
install -m0755 -d debian/python-biopython-doc/DEBIAN
install -m0755 -d debian/python3-biopython-sql/DEBIAN
printf '#!/bin/sh\nset -e\n' > debian/python3-biopython-sql/DEBIAN/postinst
cat debian/python3-biopython-sql.postinst.debhelper >> debian/python3-biopython-sql/DEBIAN/postinst
chmod 0755 -- debian/python3-biopython-sql/DEBIAN/postinst
printf '#!/bin/sh\nset -e\n' > debian/python3-biopython-sql/DEBIAN/prerm
cat debian/python3-biopython-sql.prerm.debhelper >> debian/python3-biopython-sql/DEBIAN/prerm
chmod 0755 -- debian/python3-biopython-sql/DEBIAN/prerm
dh_gencontrol -O--buildsystem=pybuild
install -m0755 -d debian/python3-biopython-sql/DEBIAN
echo misc:Depends= >> debian/python3-biopython-sql.substvars
echo misc:Pre-Depends= >> debian/python3-biopython-sql.substvars
dpkg-gencontrol -ppython3-biopython-sql -ldebian/changelog -Tdebian/python3-biopython-sql.substvars -cdebian/control -Pdebian/python3-biopython-sql
install -m0755 -d debian/python-biopython-doc/DEBIAN
echo misc:Depends= >> debian/python-biopython-doc.substvars
echo misc:Pre-Depends= >> debian/python-biopython-doc.substvars
dpkg-gencontrol -ppython-biopython-doc -ldebian/changelog -Tdebian/python-biopython-doc.substvars -cdebian/control -Pdebian/python-biopython-doc
install -m0755 -d debian/python3-biopython/DEBIAN
echo misc:Depends= >> debian/python3-biopython.substvars
echo misc:Pre-Depends= >> debian/python3-biopython.substvars
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN
dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -cdebian/control -Pdebian/.debhelper/python3-biopython/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-biopython-dbgsym "-DDepends=python3-biopython (= \${binary:Version})" "-DDescription=debug symbols for python3-biopython" "-DBuild-Ids=0b824aafb0f7abc96dad45a12e5d22fbd2d5b8dc 31bf0f167132b8d542ccf9bc2e3c17dfb77030a9 5ad294f1653b8bd9941cde9a9db7b85323d6e1a1 7eb58f33de838fdb083e46d6e8d6f1f5d77f6ab5 8e4659d63064e8d015ba678f7ee4e1f71c6dc5ca a30ac2f11d9e5546e3499dbf8e90360739145546 bdd3ee90e8e7210b86998bec239310c13d727b57 ca9ab834ef79752b37ed7343a36a1c19b78b2b86 e969d17deb1b17ad018c2a36ad9bc72ef7955da7 e9b6d680850259b8cf3cb7658552bbfbf8e65335 ed32f9799898593049253f082736071d9df8dee9" -DSection=debug -UMulti-Arch -UReplaces -UBreaks
dpkg-gencontrol: warning: Provides field of package python3-biopython-sql: substitution variable ${python3:Provides} used, but is not defined
chmod 0644 -- debian/python3-biopython-sql/DEBIAN/control
chmod 0644 -- debian/python-biopython-doc/DEBIAN/control
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/control
dpkg-gencontrol -ppython3-biopython -ldebian/changelog -Tdebian/python3-biopython.substvars -cdebian/control -Pdebian/python3-biopython
chmod 0644 -- debian/python3-biopython/DEBIAN/control
dh_md5sums -O--buildsystem=pybuild
install -m0755 -d debian/python-biopython-doc/DEBIAN
install -m0755 -d debian/python3-biopython/DEBIAN
install -m0755 -d debian/python3-biopython-sql/DEBIAN
cd debian/python3-biopython-sql >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
cd debian/python3-biopython >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
cd debian/python-biopython-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/python3-biopython-sql/DEBIAN/md5sums
chmod 0644 -- debian/python3-biopython/DEBIAN/md5sums
install -m0755 -d debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN
cd debian/.debhelper/python3-biopython/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/python3-biopython/dbgsym-root/DEBIAN/md5sums
chmod 0644 -- debian/python-biopython-doc/DEBIAN/md5sums
dh_builddeb -O--buildsystem=pybuild
dpkg-deb --root-owner-group --build debian/python3-biopython ..
dpkg-deb --root-owner-group --build debian/.debhelper/python3-biopython/dbgsym-root ..
dpkg-deb --root-owner-group --build debian/python-biopython-doc ..
dpkg-deb --root-owner-group --build debian/python3-biopython-sql ..
dpkg-deb: building package 'python3-biopython-dbgsym' in '../python3-biopython-dbgsym_1.85+dfsg-2_amd64.deb'.
dpkg-deb: building package 'python3-biopython' in '../python3-biopython_1.85+dfsg-2_amd64.deb'.
dpkg-deb: building package 'python-biopython-doc' in '../python-biopython-doc_1.85+dfsg-2_all.deb'.
dpkg-deb: building package 'python3-biopython-sql' in '../python3-biopython-sql_1.85+dfsg-2_all.deb'.
dpkg-genbuildinfo --build=binary -O../python-biopython_1.85+dfsg-2_amd64.buildinfo
dpkg-genchanges --build=binary -O../python-biopython_1.85+dfsg-2_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/3102991 and its subdirectories
I: Current time: Wed Mar 5 06:25:44 -12 2025
I: pbuilder-time-stamp: 1741199144
Wed Mar 5 18:25:46 UTC 2025 I: diffoscope 289 will be used to compare the two builds:
Running as unit: rb-diffoscope-amd64_19-47520.service
# Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.UMO7xJdH/python-biopython_1.85+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.UMO7xJdH/python-biopython_1.85+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.UMO7xJdH/python-biopython_1.85+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.UMO7xJdH/b1/python-biopython_1.85+dfsg-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.UMO7xJdH/b2/python-biopython_1.85+dfsg-2_amd64.changes
## command (total time: 0.000s)
0.000s 1 call cmp (internal)
## has_same_content_as (total time: 0.000s)
0.000s 1 call diffoscope.comparators.binary.FilesystemFile
## main (total time: 0.003s)
0.003s 2 calls outputs
0.000s 1 call cleanup
Finished with result: success
Main processes terminated with: code=exited/status=0
Service runtime: 227ms
CPU time consumed: 228ms
Wed Mar 5 18:25:47 UTC 2025 I: diffoscope 289 found no differences in the changes files, and a .buildinfo file also exists.
Wed Mar 5 18:25:47 UTC 2025 I: python-biopython from unstable built successfully and reproducibly on amd64.
Wed Mar 5 18:25:48 UTC 2025 I: Submitting .buildinfo files to external archives:
Wed Mar 5 18:25:48 UTC 2025 I: Submitting 20K b1/python-biopython_1.85+dfsg-2_amd64.buildinfo.asc
Wed Mar 5 18:25:50 UTC 2025 I: Submitting 20K b2/python-biopython_1.85+dfsg-2_amd64.buildinfo.asc
Wed Mar 5 18:25:51 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Wed Mar 5 18:25:51 UTC 2025 I: Done submitting .buildinfo files.
Wed Mar 5 18:25:51 UTC 2025 I: Removing signed python-biopython_1.85+dfsg-2_amd64.buildinfo.asc files:
removed './b1/python-biopython_1.85+dfsg-2_amd64.buildinfo.asc'
removed './b2/python-biopython_1.85+dfsg-2_amd64.buildinfo.asc'