Tue Jan 14 03:47:10 UTC 2025 I: starting to build plastimatch/unstable/amd64 on jenkins on '2025-01-14 03:46' Tue Jan 14 03:47:10 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_10/28070/console.log Tue Jan 14 03:47:10 UTC 2025 I: Downloading source for unstable/plastimatch=1.9.4+dfsg.1-3 --2025-01-14 03:47:11-- http://deb.debian.org/debian/pool/main/p/plastimatch/plastimatch_1.9.4%2bdfsg.1-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2591 (2.5K) [text/prs.lines.tag] Saving to: ‘plastimatch_1.9.4+dfsg.1-3.dsc’ 0K .. 100% 389M=0s 2025-01-14 03:47:11 (389 MB/s) - ‘plastimatch_1.9.4+dfsg.1-3.dsc’ saved [2591/2591] Tue Jan 14 03:47:11 UTC 2025 I: plastimatch_1.9.4+dfsg.1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: plastimatch Binary: plastimatch Architecture: any Version: 1.9.4+dfsg.1-3 Maintainer: Debian Med Packaging Team Uploaders: Gregory C. Sharp , Andreas Tille Homepage: https://plastimatch.org Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/plastimatch Vcs-Git: https://salsa.debian.org/med-team/plastimatch.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, libblas-dev, libcharls-dev, libdcmtk-dev, libdlib-dev, libfftw3-dev, libgdcm-dev, libinsighttoolkit5-dev, liblapack-dev, libpng-dev, libsqlite3-dev, libtiff-dev, uuid-dev, zlib1g-dev, debhelper Package-List: plastimatch deb science optional arch=any Checksums-Sha1: 43677a4efd23331b2eb32d010591f544a8e203bb 35154040 plastimatch_1.9.4+dfsg.1.orig-debian-tests-data.tar.xz 2ea93c9f2f95f752a491813b7545a8f00bf1c066 1384664 plastimatch_1.9.4+dfsg.1.orig.tar.xz df7331d98255a393644036058feceb87eff65a3c 10664 plastimatch_1.9.4+dfsg.1-3.debian.tar.xz Checksums-Sha256: d05d5c050d5bbe4236fc8fb4539ac3e84a9acaa299bac14acb7ef3728cd34936 35154040 plastimatch_1.9.4+dfsg.1.orig-debian-tests-data.tar.xz a0e972282a1288b22f7990c671ee0a1ac848acd0e1acb5a300089874ecf66a4c 1384664 plastimatch_1.9.4+dfsg.1.orig.tar.xz c237379982705adca004e614e80e2023df2abd1f5ae13b57a91fa64dbd97f524 10664 plastimatch_1.9.4+dfsg.1-3.debian.tar.xz Files: 0bb46cfc41fac0e431fbec4477901ce9 35154040 plastimatch_1.9.4+dfsg.1.orig-debian-tests-data.tar.xz caa4b4eeb52f29263bc00f22895f436f 1384664 plastimatch_1.9.4+dfsg.1.orig.tar.xz da6e81a7055f586abf8e0653cc62de71 10664 plastimatch_1.9.4+dfsg.1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEM8soQxPpC9J9y0UjYAMWptwndHYFAmajcdgACgkQYAMWptwn dHZ3CQ/+OGgqm2GE+lkgO8Wwf/TGyhrvHuyuINTn7bN6tzCHetolk80URG5pJfLf iKIAOCZiUY0/j1JvOJTin5r0MRRE3315LbDnI4TyKqytkBnrmAdGiTstOIrxpyPL 5EhoY2HeWFxybdAkSRAR71KcNOOBKXarTNd3715w3YbcPI6+pQuEx6rrWR5ccyxa Y5KXDBuhHJ9OMJ13u+T2FevnhWLmSQ5vk4uK6UZ9CxAVoMbN9T46NX9/eZBKGWRi CyqP5SSTr6MrxJUeNBVddep4YYnLcZMDdmRJzxbsmcZPfhFUWLODiCfe01yE/sWi TWqZl6ZXR5xACEIiSTt7bAeB5Yq6o7VS+p70hh1bzJr/RMjTvr5/mrcWSvh7FbxD qMCKF3i8Xqlpn60RO23gai9d9uUOt+fJPocclRB2EGZpHZHyITG3gjITZNx+d98l 6WpEkifpJeiW8Vbk61ao2UkP76hFVboWa8/q99v4nPFF/wR/Bivq8I7pYXUlKURE ikv9R3fkhQHfOHGKGs2/4ThQV1EWvmr8BJgVK29F+X2I4f5ZZPvLvpsb5WwAXGSF /Qi6pgR/v9AQMxUk0aO6FfsL3IjJjX2ornBO7hhmW5FqRby/PXZLwgIm8HJD4cL7 ZwTr14wso2EUbAlv+cKyWBBaWuD1TLzKku02kIx8wjI+nXjq04U= =FZvz -----END PGP SIGNATURE----- Tue Jan 14 03:47:11 UTC 2025 I: Checking whether the package is not for us Tue Jan 14 03:47:11 UTC 2025 I: Starting 1st build on remote node ionos5-amd64.debian.net. Tue Jan 14 03:47:11 UTC 2025 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Tue Jan 14 03:56:33 UTC 2025 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Feb 15 22:10:13 -12 2026 I: pbuilder-time-stamp: 1771236613 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [plastimatch_1.9.4+dfsg.1-3.dsc] I: copying [./plastimatch_1.9.4+dfsg.1.orig-debian-tests-data.tar.xz] I: copying [./plastimatch_1.9.4+dfsg.1.orig.tar.xz] I: copying [./plastimatch_1.9.4+dfsg.1-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./plastimatch_1.9.4+dfsg.1-3.dsc: unsupported subcommand dpkg-source: info: extracting plastimatch in plastimatch-1.9.4+dfsg.1 dpkg-source: info: unpacking plastimatch_1.9.4+dfsg.1.orig.tar.xz dpkg-source: info: unpacking plastimatch_1.9.4+dfsg.1.orig-debian-tests-data.tar.xz dpkg-source: info: unpacking plastimatch_1.9.4+dfsg.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying obsolete_RTSTRUCT_DICOM_tags.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/922745/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='c841a100bfed49388fe4fa47e2d265dd' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='922745' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.OHZfhANt/pbuilderrc_kZXo --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.OHZfhANt/b1 --logfile b1/build.log plastimatch_1.9.4+dfsg.1-3.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.11.10+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.10-1~bpo12+1 (2024-12-19) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/922745/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libblas-dev, libcharls-dev, libdcmtk-dev, libdlib-dev, libfftw3-dev, libgdcm-dev, libinsighttoolkit5-dev, liblapack-dev, libpng-dev, libsqlite3-dev, libtiff-dev, uuid-dev, zlib1g-dev, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19849 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on libcharls-dev; however: Package libcharls-dev is not installed. pbuilder-satisfydepends-dummy depends on libdcmtk-dev; however: Package libdcmtk-dev is not installed. pbuilder-satisfydepends-dummy depends on libdlib-dev; however: Package libdlib-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgdcm-dev; however: Package libgdcm-dev is not installed. pbuilder-satisfydepends-dummy depends on libinsighttoolkit5-dev; however: Package libinsighttoolkit5-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. pbuilder-satisfydepends-dummy depends on libpng-dev; however: Package libpng-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libtiff-dev; however: Package libtiff-dev is not installed. pbuilder-satisfydepends-dummy depends on uuid-dev; however: Package uuid-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} cfortran{a} cmake{a} cmake-data{a} comerr-dev{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dcmtk-data{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} default-jdk{a} default-jdk-headless{a} default-jre{a} default-jre-headless{a} default-libmysqlclient-dev{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dirmngr{a} docutils-common{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gdal-data{a} gdal-plugins{a} gettext{a} gettext-base{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} gnupg{a} gnupg-l10n{a} gpg{a} gpg-agent{a} gpgconf{a} gpgsm{a} groff-base{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} iso-codes{a} java-common{a} krb5-multidev{a} libabsl20230802{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamdhip64-5{a} libaom-dev{a} libaom3{a} libapparmor1{a} libarchive-zip-perl{a} libarchive13t64{a} libarmadillo-dev{a} libarmadillo14{a} libarpack2-dev{a} libarpack2t64{a} libasound2-data{a} libasound2t64{a} libassuan9{a} libatk-bridge2.0-0t64{a} libatk1.0-0t64{a} libatspi2.0-0t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavcodec-dev{a} libavcodec61{a} libavformat-dev{a} libavformat61{a} libavif-dev{a} libavif16{a} libavutil-dev{a} libavutil59{a} libblas-dev{a} libblas3{a} libblosc-dev{a} libblosc1{a} libbluray2{a} libboost-dev{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libcairo-gobject2{a} libcairo2{a} libcap2-bin{a} libcbor0.10{a} libcfitsio-dev{a} libcfitsio10t64{a} libcharls-dev{a} libcharls2{a} libchromaprint1{a} libcjson1{a} libclang1-19{a} libcloudproviders0{a} libcodec2-1.2{a} libcolord2{a} libcom-err2{a} libcups2t64{a} libcurl3t64-gnutls{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdatrie1{a} libdav1d-dev{a} libdav1d7{a} libdbus-1-3{a} libdcmtk-dev{a} libdcmtk18{a} libdconf1{a} libde265-0{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdlib-data{a} libdlib-dev{a} libdlib19.2{a} libdouble-conversion-dev{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libdvdnav4{a} libdvdread8t64{a} libdw1t64{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libepoxy0{a} libevdev2{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libffi8{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfontconfig-dev{a} libfontconfig1{a} libfontconfig1-dev{a} libfreetype-dev{a} libfreetype6{a} libfreexl-dev{a} libfreexl1{a} libfribidi0{a} libfyba-dev{a} libfyba0t64{a} libgav1-1{a} libgbm1{a} libgcrypt20{a} libgdal-dev{a} libgdal36{a} libgdcm-dev{a} libgdcm3.0t64{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgeos-c1t64{a} libgeos-dev{a} libgeos3.13.0{a} libgeotiff-dev{a} libgeotiff5{a} libgfortran-14-dev{a} libgfortran5{a} libgif-dev{a} libgif7{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libgl2ps-dev{a} libgl2ps1.4{a} libglapi-mesa{a} libglew-dev{a} libglew2.2{a} libglib2.0-0t64{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgme0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgnutls30t64{a} libgpg-error0{a} libgpgme11t64{a} libgpgmepp6t64{a} libgraphite2-3{a} libgsm1{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libgstreamer-plugins-base1.0-0{a} libgstreamer1.0-0{a} libgtk-3-0t64{a} libgtk-3-common{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhdf4-0-alt{a} libhdf4-alt-dev{a} libhdf5-310{a} libhdf5-cpp-310{a} libhdf5-dev{a} libhdf5-fortran-310{a} libhdf5-hl-310{a} libhdf5-hl-cpp-310{a} libhdf5-hl-fortran-310{a} libhdf5-mpi-dev{a} libhdf5-openmpi-310{a} libhdf5-openmpi-cpp-310{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-310{a} libhdf5-openmpi-hl-310{a} libhdf5-openmpi-hl-cpp-310{a} libhdf5-openmpi-hl-fortran-310{a} libheif-dev{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libhwy1t64{a} libhyphen0{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libice-dev{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-0{a} libidn2-dev{a} libimath-3-1-29t64{a} libinput-bin{a} libinput10{a} libinsighttoolkit5-dev{a} libinsighttoolkit5.3{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-c-dev{a} libjson-c5{a} libjson-perl{a} libjsoncpp-dev{a} libjsoncpp26{a} libjxl0.10{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkml-dev{a} libkmlbase1t64{a} libkmlconvenience1t64{a} libkmldom1t64{a} libkmlengine1t64{a} libkmlregionator1t64{a} libkmlxsd1t64{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} libksba8{a} liblapack-dev{a} liblapack3{a} liblcms2-2{a} libldap-2.5-0{a} libldap-dev{a} liblerc-dev{a} liblerc4{a} libllvm17t64{a} libllvm19{a} libltdl-dev{a} libltdl7{a} liblz4-dev{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmariadb-dev{a} libmariadb-dev-compat{a} libmariadb3{a} libmbedcrypto16{a} libmd4c0{a} libminc-dev{a} libminc2-5.3.0t64{a} libminizip-dev{a} libminizip1t64{a} libmp3lame0{a} libmpg123-0t64{a} libmtdev1t64{a} libmunge2{a} libnetcdf-dev{a} libnetcdf19t64{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnifti-dev{a} libnifti2-2{a} libnifti2-dev{a} libnifticdf-dev{a} libnifticdf2{a} libniftiio-dev{a} libniftiio2t64{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnorm1t64{a} libnpth0t64{a} libnsl-dev{a} libnsl2{a} libnspr4{a} libnss3{a} libnuma-dev{a} libnuma1{a} libodbc2{a} libodbccr2{a} libodbcinst2{a} libogdi-dev{a} libogdi4.1{a} libogg-dev{a} libogg0{a} libopencv-core-dev{a} libopencv-core406t64{a} libopenexr-3-1-30{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libopenjp2-7-dev{a} libopenmpi-dev{a} libopenmpi40{a} libopenmpt0t64{a} libopus0{a} liborc-0.4-0t64{a} libp11-kit-dev{a} libp11-kit0{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpciaccess0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpcsclite1{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpng-dev{a} libpng16-16t64{a} libpoppler-dev{a} libpoppler-private-dev{a} libpoppler140{a} libpq-dev{a} libpq5{a} libproc2-0{a} libproj-dev{a} libproj25{a} libpsl-dev{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-dev{a} libqhull-r8.0{a} libqhull8.0{a} libqhullcpp8.0{a} libqt5concurrent5t64{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5designer5{a} libqt5designercomponents5{a} libqt5gui5t64{a} libqt5help5{a} libqt5network5t64{a} libqt5opengl5-dev{a} libqt5opengl5t64{a} libqt5positioning5{a} libqt5printsupport5t64{a} libqt5qml5{a} libqt5qmlmodels5{a} libqt5qmlworkerscript5{a} libqt5quick5{a} libqt5quickparticles5{a} libqt5quickshapes5{a} libqt5quicktest5{a} libqt5quickwidgets5{a} libqt5sensors5{a} libqt5sql5-sqlite{a} libqt5sql5t64{a} libqt5test5t64{a} libqt5webchannel5{a} libqt5webkit5{a} libqt5webkit5-dev{a} libqt5widgets5t64{a} libqt5xml5t64{a} librabbitmq4{a} librav1e-dev{a} librav1e0.7{a} librdmacm1t64{a} libreadline8t64{a} librhash1{a} librist4{a} librsvg2-2{a} librtmp-dev{a} librtmp1{a} librttopo-dev{a} librttopo1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv-dev{a} libsharpyuv0{a} libshine3{a} libsm-dev{a} libsm6{a} libsnappy1v5{a} libsocket++1{a} libsodium23{a} libsoxr0{a} libspatialite-dev{a} libspatialite8t64{a} libspeex1{a} libsqlite3-dev{a} libsrt1.5-gnutls{a} libssh-4{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuperlu-dev{a} libsuperlu7{a} libsvtav1enc-dev{a} libsvtav1enc2{a} libswresample-dev{a} libswresample5{a} libswscale-dev{a} libswscale8{a} libsystemd-shared{a} libsz2{a} libtasn1-6{a} libtasn1-6-dev{a} libtbb-dev{a} libtbb12{a} libtbbbind-2-5{a} libtbbmalloc2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtheora-dev{a} libtheora0{a} libtiff-dev{a} libtiff6{a} libtiffxx6{a} libtirpc-common{a} libtirpc-dev{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libtwolame0{a} libuchardet0{a} libucx0{a} libudfread0{a} libunbound8{a} libunistring5{a} libunwind8{a} liburiparser-dev{a} liburiparser1{a} libutfcpp-dev{a} libuv1t64{a} libva-drm2{a} libva-x11-2{a} libva2{a} libvdpau1{a} libvorbis0a{a} libvorbisenc2{a} libvorbisfile3{a} libvpl2{a} libvpx9{a} libvtk9-dev{a} libvtk9-java{a} libvtk9-qt-dev{a} libvtk9.3{a} libvtk9.3-qt{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp-dev{a} libwebp7{a} libwebpdecoder3{a} libwebpdemux2{a} libwebpmux3{a} libwoff1{a} libwrap0{a} libwrap0-dev{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libx264-164{a} libx265-209{a} libxau-dev{a} libxau6{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxerces-c-dev{a} libxerces-c3.2t64{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxft-dev{a} libxft2{a} libxi6{a} libxinerama1{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxml2-dev{a} libxnvctrl0{a} libxrandr2{a} libxrender-dev{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss-dev{a} libxss1{a} libxt-dev{a} libxt6t64{a} libxtst6{a} libxvidcore4{a} libxxf86vm1{a} libxxhash-dev{a} libyuv-dev{a} libyuv0{a} libz3-4{a} libzmq5{a} libznz-dev{a} libznz3{a} libzstd-dev{a} libzvbi-common{a} libzvbi0t64{a} m4{a} man-db{a} mariadb-common{a} media-types{a} mesa-libgallium{a} mpi-default-bin{a} mpi-default-dev{a} mysql-common{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} openjdk-21-jdk{a} openjdk-21-jdk-headless{a} openjdk-21-jre{a} openjdk-21-jre-headless{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} pinentry-curses{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} proj-data{a} pybind11-dev{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-autocommand{a} python3-babel{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-defusedxml{a} python3-docutils{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jinja2{a} python3-markupsafe{a} python3-minimal{a} python3-more-itertools{a} python3-mpi4py{a} python3-packaging{a} python3-pkg-resources{a} python3-pygments{a} python3-requests{a} python3-roman{a} python3-snowballstemmer{a} python3-sphinx{a} python3-typeguard{a} python3-typing-extensions{a} python3-urllib3{a} python3-vtk9{a} python3.13{a} python3.13-minimal{a} qdoc-qt5{a} qhelpgenerator-qt5{a} qt5-assistant{a} qt5-qmake{a} qt5-qmake-bin{a} qt5-qmltooling-plugins{a} qtattributionsscanner-qt5{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} qtdeclarative5-dev{a} qtdeclarative5-dev-tools{a} qttools5-dev{a} qttools5-dev-tools{a} qttools5-private-dev{a} readline-common{a} sensible-utils{a} sgml-base{a} shared-mime-info{a} sphinx-common{a} systemd{a} systemd-sysv{a} tcl{a} tcl-dev{a} tcl8.6{a} tcl8.6-dev{a} tk{a} tk-dev{a} tk8.6{a} tk8.6-dev{a} tzdata{a} unixodbc-common{a} unixodbc-dev{a} uuid-dev{a} vtk9{a} x11-common{a} x11proto-dev{a} xkb-data{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: alsa-topology-conf alsa-ucm-conf at-spi2-core bzip2-doc chrony curl flang-17 flang-18 flang-19 fonts-dejavu-extra geoclue-2.0 gfortran gnupg-utils gpg-wks-client gpgv gpgv-from-sq gstreamer1.0-plugins-base i965-va-driver intel-media-va-driver javascript-common krb5-locales lfortran libaacs0 libarchive-cpio-perl libatk-wrapper-java-jni libcfitsio-doc libcoarrays-openmpi-dev libgdk-pixbuf2.0-bin libglib2.0-data libgpg-error-l10n libgtk-3-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libkmod2 libldap-common libmail-sendmail-perl libnss-systemd libpam-cap libpaper-utils libpng-tools libqt5svg5 librsvg2-common libsasl2-modules libtasn1-doc libvdpau-va-gl1 linux-sysctl-defaults lynx mesa-va-drivers mesa-vdpau-drivers mesa-vulkan-drivers ntpsec openntpd poppler-data proj-bin psmisc publicsuffix python3-pil qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 systemd-cryptsetup systemd-timesyncd va-driver-all vdpau-driver-all wget xauth xdg-user-dirs 0 packages upgraded, 725 newly installed, 0 to remove and 0 not upgraded. Need to get 699 MB of archives. After unpacking 2800 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libapparmor1 amd64 3.1.7-1+b3 [42.1 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libsystemd-shared amd64 257.2-1 [2136 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 systemd amd64 257.2-1 [3609 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 systemd-sysv amd64 257.2-1 [60.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.16.0-1 [177 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 dbus-bin amd64 1.16.0-1 [78.9 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 dbus-session-bus-common all 1.16.0-1 [51.1 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 dbus-daemon amd64 1.16.0-1 [157 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 dbus-system-bus-common all 1.16.0-1 [52.2 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 dbus amd64 1.16.0-1 [70.5 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.4.6-1 [23.6 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.4-1 [1501 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 15 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libdw1t64 amd64 0.192-4 [255 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libunwind8 amd64 1.7.2-1 [52.8 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libcap2-bin amd64 1:2.66-5+b1 [35.3 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libgstreamer1.0-0 amd64 1.24.11-1 [1400 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 liborc-0.4-0t64 amd64 1:0.4.40-1 [189 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 iso-codes all 4.17.0-1 [3055 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libgstreamer-plugins-base1.0-0 amd64 1.24.11-1 [1005 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libhyphen0 amd64 2.8.8-7+b2 [30.7 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-6 [9421 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.45-1 [281 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libdouble-conversion3 amd64 3.3.0-1+b2 [41.8 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.44-5 [260 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libqt5core5t64 amd64 5.15.15+dfsg-2 [1866 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2 [317 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2 [391 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-2 [463 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libwayland-server0 amd64 1.23.0-1+b1 [34.2 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libglapi-mesa amd64 24.3.3-1 [38.0 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.6-1+b1 [26.0 MB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [241 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3-1+b3 [8852 B] Get: 64 http://deb.debian.org/debian unstable/main amd64 mesa-libgallium amd64 24.3.3-1 [9488 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libgbm1 amd64 24.3.3-1 [43.5 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libwayland-client0 amd64 1.23.0-1+b1 [26.6 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libegl-mesa0 amd64 24.3.3-1 [127 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libegl1 amd64 1.7.0-1+b2 [34.6 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b4 [19.3 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.3.296.0-1 [126 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libgl1-mesa-dri amd64 24.3.3-1 [44.9 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libglx-mesa0 amd64 24.3.3-1 [142 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.1.0-2 [478 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.2 [216 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libevdev2 amd64 1.13.3+dfsg-1 [32.2 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libmtdev1t64 amd64 1.1.6-1.2+b1 [22.5 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libgudev-1.0-0 amd64 238-6 [14.5 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libwacom-common all 2.13.0-1 [98.0 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libwacom9 amd64 2.13.0-1 [24.0 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libinput-bin amd64 1.26.2-1 [25.3 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libinput10 amd64 1.26.2-1 [131 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libmd4c0 amd64 0.5.2-2+b1 [49.0 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-2 [217 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 95 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libqt5network5t64 amd64 5.15.15+dfsg-2 [682 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libxcb-icccm4 amd64 0.4.2-1 [27.5 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libxcb-util1 amd64 0.4.0-1+b2 [22.5 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 libxcb-image0 amd64 0.4.0-2+b2 [22.2 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b3 [15.7 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 libxcb-render-util0 amd64 0.3.9-1+b2 [17.4 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libxcb-shape0 amd64 1.17.0-2+b1 [106 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 libxcb-xinerama0 amd64 1.17.0-2+b1 [105 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 libxcb-xinput0 amd64 1.17.0-2+b1 [130 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 libxcb-xkb1 amd64 1.17.0-2+b1 [130 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.42-1 [790 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 libxkbcommon0 amd64 1.7.0-2 [113 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 libxkbcommon-x11-0 amd64 1.7.0-2 [16.2 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b3 [27.8 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 libqt5gui5t64 amd64 5.15.15+dfsg-2 [3498 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 libqt5positioning5 amd64 5.15.15+dfsg-3 [207 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-16 [112 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-16 [44.2 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-16 [48.4 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.8-2 [1454 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.10-2+b1 [251 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-2 [2400 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-2 [206 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libqt5qml5 amd64 5.15.15+dfsg-3 [1377 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 libqt5qmlmodels5 amd64 5.15.15+dfsg-3 [193 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 libqt5quick5 amd64 5.15.15+dfsg-3 [1610 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 libqt5sensors5 amd64 5.15.15-2 [113 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 libqt5webchannel5 amd64 5.15.15-2 [58.3 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libwoff1 amd64 1.0.2-2+b2 [44.3 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libqt5webkit5 amd64 5.212.0~alpha4-42 [12.0 MB] Get: 138 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.5-1 [44.3 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.10-2 [891 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libglx-dev amd64 1.7.0-1+b2 [15.8 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libgl-dev amd64 1.7.0-1+b2 [101 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libegl-dev amd64 1.7.0-1+b2 [19.5 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libopengl0 amd64 1.7.0-1+b2 [30.9 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa amd64 9.0.2-1.1+b3 [184 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libopengl-dev amd64 1.7.0-1+b2 [5388 B] Get: 151 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1+b3 [223 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libqt5concurrent5t64 amd64 5.15.15+dfsg-2 [44.6 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libqt5sql5t64 amd64 5.15.15+dfsg-2 [125 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libqt5test5t64 amd64 5.15.15+dfsg-2 [151 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libqt5xml5t64 amd64 5.15.15+dfsg-2 [126 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.1-3 [858 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.1-3 [2202 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.1-2 [27.0 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-5 [256 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.1-3 [1973 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.1-3 [740 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.1-2 [9952 B] Get: 167 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.1-2 [28.0 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libvulkan-dev amd64 1.3.296.0-1 [1397 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libxext-dev amd64 2:1.3.4-1+b3 [104 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 qt5-qmake-bin amd64 5.15.15+dfsg-2 [1066 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 qtchooser amd64 66-2 [26.3 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 qt5-qmake amd64 5.15.15+dfsg-2 [224 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 qtbase5-dev-tools amd64 5.15.15+dfsg-2 [777 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 qtbase5-dev amd64 5.15.15+dfsg-2 [1122 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libqt5qmlworkerscript5 amd64 5.15.15+dfsg-3 [35.4 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 libqt5quickparticles5 amd64 5.15.15+dfsg-3 [206 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libqt5quickshapes5 amd64 5.15.15+dfsg-3 [97.9 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libqt5quicktest5 amd64 5.15.15+dfsg-3 [57.2 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libqt5quickwidgets5 amd64 5.15.15+dfsg-3 [40.2 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 qt5-qmltooling-plugins amd64 5.15.15+dfsg-3 [179 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 qtdeclarative5-dev-tools amd64 5.15.15+dfsg-3 [630 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 qtdeclarative5-dev amd64 5.15.15+dfsg-3 [461 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libqt5webkit5-dev amd64 5.212.0~alpha4-42 [55.6 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.4.0-2 [1422 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20241223 [164 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-4 [200 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libpam-systemd amd64 257.2-1 [292 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.3-1 [92.1 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p1-3 [991 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1+b1 [141 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 gtk-update-icon-cache amd64 4.16.12+ds-1 [50.6 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get: 211 http://deb.debian.org/debian unstable/main amd64 adwaita-icon-theme all 47.0-2 [463 kB] Get: 212 http://deb.debian.org/debian unstable/main amd64 at-spi2-common all 2.55.0-1 [170 kB] Get: 213 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-5 [294 kB] Get: 214 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-4 [723 kB] Get: 218 http://deb.debian.org/debian unstable/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get: 219 http://deb.debian.org/debian unstable/main amd64 cfortran all 20210827-1 [67.7 kB] Get: 220 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.31.3-1 [2268 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.19+dfsg-1 [187 kB] Get: 225 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.11.1-1 [351 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB] Get: 231 http://deb.debian.org/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.31.3-1 [11.9 MB] Get: 234 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.2-1 [55.7 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 dbus-user-session amd64 1.16.0-1 [51.0 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 dcmtk-data all 3.6.8-6 [298 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libdconf1 amd64 0.40.0-4+b3 [41.9 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 dconf-service amd64 0.40.0-4+b3 [32.6 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 dconf-gsettings-backend amd64 0.40.0-4+b3 [28.8 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.23 [90.6 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-2 [539 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 246 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-4 [1600 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 250 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.23 [919 kB] Get: 251 http://deb.debian.org/debian unstable/main amd64 java-common all 0.76 [6776 B] Get: 252 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 libnspr4 amd64 2:4.36-1 [110 kB] Get: 254 http://deb.debian.org/debian unstable/main amd64 libnss3 amd64 2:3.107-1 [1390 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 libpcsclite1 amd64 2.3.1-1 [56.0 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jre-headless amd64 21.0.6~6ea-1 [41.8 MB] Get: 257 http://deb.debian.org/debian unstable/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get: 258 http://deb.debian.org/debian unstable/main amd64 libatk1.0-0t64 amd64 2.55.0-1 [51.4 kB] Get: 259 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get: 260 http://deb.debian.org/debian unstable/main amd64 libatspi2.0-0t64 amd64 2.55.0-1 [76.6 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 libatk-bridge2.0-0t64 amd64 2.55.0-1 [67.7 kB] Get: 262 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 263 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get: 264 http://deb.debian.org/debian unstable/main amd64 libcairo-gobject2 amd64 1.18.2-2 [130 kB] Get: 265 http://deb.debian.org/debian unstable/main amd64 libcloudproviders0 amd64 0.3.6-1+b1 [29.2 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 libcolord2 amd64 1.4.7-1+b2 [140 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 libepoxy0 amd64 1.5.10-2 [193 kB] Get: 268 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-1 [26.5 kB] Get: 269 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get: 271 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get: 272 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.55.0+ds-3 [225 kB] Get: 273 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.55.0+ds-3 [54.6 kB] Get: 274 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.55.0+ds-3 [35.4 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 libwayland-cursor0 amd64 1.23.0-1+b1 [11.7 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 libwayland-egl1 amd64 1.23.0-1+b1 [5664 B] Get: 277 http://deb.debian.org/debian unstable/main amd64 libxcomposite1 amd64 1:0.4.6-1 [16.3 kB] Get: 278 http://deb.debian.org/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b3 [20.2 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 libxcursor1 amd64 1:1.2.3-1 [39.7 kB] Get: 280 http://deb.debian.org/debian unstable/main amd64 libxdamage1 amd64 1:1.1.6-1+b2 [15.5 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 libxinerama1 amd64 2:1.1.4-3+b3 [16.0 kB] Get: 282 http://deb.debian.org/debian unstable/main amd64 libxrandr2 amd64 2:1.5.4-1+b2 [36.4 kB] Get: 283 http://deb.debian.org/debian unstable/main amd64 libgtk-3-common all 3.24.43-4 [4657 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 libgtk-3-0t64 amd64 3.24.43-4 [2754 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 libasound2-data all 1.2.13-1 [21.1 kB] Get: 286 http://deb.debian.org/debian unstable/main amd64 libasound2t64 amd64 1.2.13-1+b1 [373 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 libgif7 amd64 5.2.2-1+b1 [44.2 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 libxtst6 amd64 2:1.2.3-1.1+b3 [25.9 kB] Get: 289 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jre amd64 21.0.6~6ea-1 [204 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 default-jre amd64 2:1.21-76 [1068 B] Get: 291 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jdk-headless amd64 21.0.6~6ea-1 [82.8 MB] Get: 292 http://deb.debian.org/debian unstable/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B] Get: 293 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jdk amd64 21.0.6~6ea-1 [3938 kB] Get: 294 http://deb.debian.org/debian unstable/main amd64 default-jdk amd64 2:1.21-76 [1076 B] Get: 295 http://deb.debian.org/debian unstable/main amd64 mysql-common all 5.8+1.1.1 [6784 B] Get: 296 http://deb.debian.org/debian unstable/main amd64 mariadb-common all 1:11.4.4-3 [27.9 kB] Get: 297 http://deb.debian.org/debian unstable/main amd64 libmariadb3 amd64 1:11.4.4-3 [179 kB] Get: 298 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.4.0-2 [2790 kB] Get: 299 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 libmariadb-dev amd64 1:11.4.4-3 [270 kB] Get: 301 http://deb.debian.org/debian unstable/main amd64 libmariadb-dev-compat amd64 1:11.4.4-3 [26.7 kB] Get: 302 http://deb.debian.org/debian unstable/main amd64 default-libmysqlclient-dev amd64 1.1.1 [3252 B] Get: 303 http://deb.debian.org/debian unstable/main amd64 libassuan9 amd64 3.0.1-2 [60.6 kB] Get: 304 http://deb.debian.org/debian unstable/main amd64 gpgconf amd64 2.2.46-1 [121 kB] Get: 305 http://deb.debian.org/debian unstable/main amd64 libksba8 amd64 1.6.7-2+b1 [136 kB] Get: 306 http://deb.debian.org/debian unstable/main amd64 libnpth0t64 amd64 1.8-2 [22.9 kB] Get: 307 http://deb.debian.org/debian unstable/main amd64 dirmngr amd64 2.2.46-1 [369 kB] Get: 308 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 309 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 310 http://deb.debian.org/debian unstable/main amd64 gdal-data all 3.10.1+dfsg-1 [401 kB] Get: 311 http://deb.debian.org/debian unstable/main amd64 gdal-plugins amd64 3.10.1+dfsg-1 [179 kB] Get: 312 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-13 [837 kB] Get: 313 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-13 [881 kB] Get: 314 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-13 [11.7 MB] Get: 315 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-13 [13.5 kB] Get: 316 http://deb.debian.org/debian unstable/main amd64 gnupg-l10n all 2.2.46-1 [702 kB] Get: 317 http://deb.debian.org/debian unstable/main amd64 gpg amd64 2.2.46-1 [532 kB] Get: 318 http://deb.debian.org/debian unstable/main amd64 pinentry-curses amd64 1.3.1-2 [86.4 kB] Get: 319 http://deb.debian.org/debian unstable/main amd64 gpg-agent amd64 2.2.46-1 [251 kB] Get: 320 http://deb.debian.org/debian unstable/main amd64 gpgsm amd64 2.2.46-1 [255 kB] Get: 321 http://deb.debian.org/debian unstable/main amd64 gnupg all 2.2.46-1 [376 kB] Get: 322 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 1.14.5+repack-3 [26.6 kB] Get: 323 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get: 324 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get: 325 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-2+b2 [62.2 kB] Get: 326 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-2+b2 [343 kB] Get: 327 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-6 [210 kB] Get: 328 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.21.3-3 [59.5 kB] Get: 329 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.21.3-3 [41.7 kB] Get: 330 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.21.3-3 [42.0 kB] Get: 331 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.21.3-3 [53.5 kB] Get: 332 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.21.3-3 [126 kB] Get: 333 http://deb.debian.org/debian unstable/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get: 334 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 335 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 336 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get: 337 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-20+b1 [23.6 MB] Get: 338 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get: 339 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get: 340 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB] Get: 341 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB] Get: 342 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB] Get: 343 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.11.0-1 [1879 kB] Get: 344 http://deb.debian.org/debian unstable/main amd64 libaom-dev amd64 3.11.0-1 [2117 kB] Get: 345 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-4 [152 kB] Get: 346 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] Get: 347 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-4 [104 kB] Get: 348 http://deb.debian.org/debian unstable/main amd64 libarmadillo14 amd64 1:14.2.1+dfsg-1+b1 [102 kB] Get: 349 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.0-4 [161 kB] Get: 350 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.0-4 [4991 kB] Get: 351 http://deb.debian.org/debian unstable/main amd64 libarpack2-dev amd64 3.9.1-4 [120 kB] Get: 352 http://deb.debian.org/debian unstable/main amd64 libhdf5-310 amd64 1.14.5+repack-3 [1344 kB] Get: 353 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-310 amd64 1.14.5+repack-3 [111 kB] Get: 354 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-310 amd64 1.14.5+repack-3 [69.3 kB] Get: 355 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-310 amd64 1.14.5+repack-3 [43.9 kB] Get: 356 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-310 amd64 1.14.5+repack-3 [133 kB] Get: 357 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-310 amd64 1.14.5+repack-3 [24.4 kB] Get: 358 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] Get: 359 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] Get: 360 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b6 [316 kB] Get: 361 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.7-2+b1 [123 kB] Get: 362 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.21.3-3 [15.7 kB] Get: 363 http://deb.debian.org/debian unstable/main amd64 libldap-dev amd64 2.5.19+dfsg-1 [303 kB] Get: 364 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 365 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 366 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 367 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get: 368 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get: 369 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3 [329 kB] Get: 370 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3 [642 kB] Get: 371 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 372 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1+b1 [598 kB] Get: 373 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.8-2 [449 kB] Get: 374 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.8-2 [449 kB] Get: 375 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-3 [208 kB] Get: 376 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.19.0-3+b3 [98.9 kB] Get: 377 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10-1+b1 [1317 kB] Get: 378 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.8-2 [1391 kB] Get: 379 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get: 380 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get: 381 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-2 [365 kB] Get: 382 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.11.1-1 [464 kB] Get: 383 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 1.14.5+repack-3 [3165 kB] Get: 384 http://deb.debian.org/debian unstable/main amd64 libsuperlu7 amd64 7.0.0+dfsg1-2 [174 kB] Get: 385 http://deb.debian.org/debian unstable/main amd64 libsuperlu-dev amd64 7.0.0+dfsg1-2 [21.9 kB] Get: 386 http://deb.debian.org/debian unstable/main amd64 libarmadillo-dev amd64 1:14.2.1+dfsg-1+b1 [414 kB] Get: 387 http://deb.debian.org/debian unstable/main amd64 libva2 amd64 2.22.0-1+b1 [79.1 kB] Get: 388 http://deb.debian.org/debian unstable/main amd64 libva-drm2 amd64 2.22.0-1+b1 [18.6 kB] Get: 389 http://deb.debian.org/debian unstable/main amd64 libva-x11-2 amd64 2.22.0-1+b1 [23.4 kB] Get: 390 http://deb.debian.org/debian unstable/main amd64 libvdpau1 amd64 1.5-3+b1 [27.2 kB] Get: 391 http://deb.debian.org/debian unstable/main amd64 libvpl2 amd64 1:2.13.0-1 [128 kB] Get: 392 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 393 http://deb.debian.org/debian unstable/main amd64 libavutil59 amd64 7:7.1-3+b1 [409 kB] Get: 394 http://deb.debian.org/debian unstable/main amd64 libcodec2-1.2 amd64 1.2.0-2+b2 [8179 kB] Get: 395 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.0-1+b1 [550 kB] Get: 396 http://deb.debian.org/debian unstable/main amd64 libgsm1 amd64 1.0.22-1+b2 [29.3 kB] Get: 397 http://deb.debian.org/debian unstable/main amd64 libhwy1t64 amd64 1.2.0-2+b2 [676 kB] Get: 398 http://deb.debian.org/debian unstable/main amd64 libimath-3-1-29t64 amd64 3.1.12-1+b2 [45.5 kB] Get: 399 http://deb.debian.org/debian unstable/main amd64 libopenexr-3-1-30 amd64 3.1.5-5.1+b4 [935 kB] Get: 400 http://deb.debian.org/debian unstable/main amd64 libjxl0.10 amd64 0.10.4-2 [1096 kB] Get: 401 http://deb.debian.org/debian unstable/main amd64 libmp3lame0 amd64 3.100-6+b3 [363 kB] Get: 402 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get: 403 http://deb.debian.org/debian unstable/main amd64 libopus0 amd64 1.5.2-2 [2852 kB] Get: 404 http://deb.debian.org/debian unstable/main amd64 librav1e0.7 amd64 0.7.1-9 [939 kB] Get: 405 http://deb.debian.org/debian unstable/main amd64 librsvg2-2 amd64 2.59.2+dfsg-1 [1854 kB] Get: 406 http://deb.debian.org/debian unstable/main amd64 libshine3 amd64 3.1.1-2+b2 [23.1 kB] Get: 407 http://deb.debian.org/debian unstable/main amd64 libsnappy1v5 amd64 1.2.1-1+b1 [29.6 kB] Get: 408 http://deb.debian.org/debian unstable/main amd64 libspeex1 amd64 1.2.1-3 [56.8 kB] Get: 409 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2489 kB] Get: 410 http://deb.debian.org/debian unstable/main amd64 libsoxr0 amd64 0.1.3-4+b2 [81.0 kB] Get: 411 http://deb.debian.org/debian unstable/main amd64 libswresample5 amd64 7:7.1-3+b1 [93.1 kB] Get: 412 http://deb.debian.org/debian unstable/main amd64 libogg0 amd64 1.3.5-3+b2 [23.8 kB] Get: 413 http://deb.debian.org/debian unstable/main amd64 libtheora0 amd64 1.1.1+dfsg.1-17 [155 kB] Get: 414 http://deb.debian.org/debian unstable/main amd64 libtwolame0 amd64 0.4.0-2+b2 [51.3 kB] Get: 415 http://deb.debian.org/debian unstable/main amd64 libvorbis0a amd64 1.3.7-2+b1 [91.1 kB] Get: 416 http://deb.debian.org/debian unstable/main amd64 libvorbisenc2 amd64 1.3.7-2+b1 [76.1 kB] Get: 417 http://deb.debian.org/debian unstable/main amd64 libvpx9 amd64 1.15.0-1 [1115 kB] Get: 418 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Get: 419 http://deb.debian.org/debian unstable/main amd64 libx264-164 amd64 2:0.164.3108+git31e19f9-2 [558 kB] Get: 420 http://deb.debian.org/debian unstable/main amd64 libx265-209 amd64 3.6-3+b1 [1191 kB] Get: 421 http://deb.debian.org/debian unstable/main amd64 libxvidcore4 amd64 2:1.3.7-1+b2 [252 kB] Get: 422 http://deb.debian.org/debian unstable/main amd64 libzvbi-common all 0.2.43-2 [71.2 kB] Get: 423 http://deb.debian.org/debian unstable/main amd64 libzvbi0t64 amd64 0.2.43-2 [278 kB] Get: 424 http://deb.debian.org/debian unstable/main amd64 libavcodec61 amd64 7:7.1-3+b1 [5807 kB] Get: 425 http://deb.debian.org/debian unstable/main amd64 libavutil-dev amd64 7:7.1-3+b1 [564 kB] Get: 426 http://deb.debian.org/debian unstable/main amd64 libswresample-dev amd64 7:7.1-3+b1 [107 kB] Get: 427 http://deb.debian.org/debian unstable/main amd64 libavcodec-dev amd64 7:7.1-3+b1 [6448 kB] Get: 428 http://deb.debian.org/debian unstable/main amd64 libudfread0 amd64 1.1.2-1+b2 [17.7 kB] Get: 429 http://deb.debian.org/debian unstable/main amd64 libbluray2 amd64 1:1.3.4-1+b2 [138 kB] Get: 430 http://deb.debian.org/debian unstable/main amd64 libchromaprint1 amd64 1.5.1-7 [42.9 kB] Get: 431 http://deb.debian.org/debian unstable/main amd64 libdvdread8t64 amd64 6.1.3-2 [86.2 kB] Get: 432 http://deb.debian.org/debian unstable/main amd64 libdvdnav4 amd64 6.1.1-3+b1 [44.5 kB] Get: 433 http://deb.debian.org/debian unstable/main amd64 libgme0 amd64 0.6.3-7+b2 [131 kB] Get: 434 http://deb.debian.org/debian unstable/main amd64 libmpg123-0t64 amd64 1.32.10-1 [149 kB] Get: 435 http://deb.debian.org/debian unstable/main amd64 libvorbisfile3 amd64 1.3.7-2+b1 [21.5 kB] Get: 436 http://deb.debian.org/debian unstable/main amd64 libopenmpt0t64 amd64 0.7.12-1 [854 kB] Get: 437 http://deb.debian.org/debian unstable/main amd64 librabbitmq4 amd64 0.15.0-1 [41.8 kB] Get: 438 http://deb.debian.org/debian unstable/main amd64 libcjson1 amd64 1.7.18-3+b1 [29.9 kB] Get: 439 http://deb.debian.org/debian unstable/main amd64 libmbedcrypto16 amd64 3.6.2-3 [355 kB] Get: 440 http://deb.debian.org/debian unstable/main amd64 librist4 amd64 0.2.11+dfsg-1 [72.1 kB] Get: 441 http://deb.debian.org/debian unstable/main amd64 libsrt1.5-gnutls amd64 1.5.4-1 [345 kB] Get: 442 http://deb.debian.org/debian unstable/main amd64 libssh-4 amd64 0.11.1-1 [208 kB] Get: 443 http://deb.debian.org/debian unstable/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1+b2 [221 kB] Get: 444 http://deb.debian.org/debian unstable/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1+b1 [162 kB] Get: 445 http://deb.debian.org/debian unstable/main amd64 libsodium23 amd64 1.0.18-1+b2 [165 kB] Get: 446 http://deb.debian.org/debian unstable/main amd64 libzmq5 amd64 4.3.5-1+b3 [283 kB] Get: 447 http://deb.debian.org/debian unstable/main amd64 libavformat61 amd64 7:7.1-3+b1 [1183 kB] Get: 448 http://deb.debian.org/debian unstable/main amd64 libavformat-dev amd64 7:7.1-3+b1 [1392 kB] Get: 449 http://deb.debian.org/debian unstable/main amd64 libdav1d-dev amd64 1.5.0-1+b1 [26.9 kB] Get: 450 http://deb.debian.org/debian unstable/main amd64 librav1e-dev amd64 0.7.1-9 [14.1 kB] Get: 451 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc-dev amd64 2.3.0+dfsg-1 [33.0 kB] Get: 452 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1899.20250103-1 [173 kB] Get: 453 http://deb.debian.org/debian unstable/main amd64 libyuv-dev amd64 0.0.1899.20250103-1 [224 kB] Get: 454 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-3 [350 kB] Get: 455 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.1.1-1 [117 kB] Get: 456 http://deb.debian.org/debian unstable/main amd64 libavif-dev amd64 1.1.1-1 [54.8 kB] Get: 457 http://deb.debian.org/debian unstable/main amd64 libblosc1 amd64 1.21.5+ds-1+b2 [49.5 kB] Get: 458 http://deb.debian.org/debian unstable/main amd64 libblosc-dev amd64 1.21.5+ds-1+b2 [61.5 kB] Get: 459 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-4 [10.6 MB] Get: 460 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 461 http://deb.debian.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB] Get: 462 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.6.0-2 [64.8 kB] Get: 463 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.9.1-1 [119 kB] Get: 464 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.9.1-1 [18.5 kB] Get: 465 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.11.1-1 [360 kB] Get: 466 http://deb.debian.org/debian unstable/main amd64 libcfitsio10t64 amd64 4.5.0-5 [575 kB] Get: 467 http://deb.debian.org/debian unstable/main amd64 libcfitsio-dev amd64 4.5.0-5 [640 kB] Get: 468 http://deb.debian.org/debian unstable/main amd64 libcharls2 amd64 2.4.2-2+b2 [91.9 kB] Get: 469 http://deb.debian.org/debian unstable/main amd64 libcharls-dev amd64 2.4.2-2+b2 [29.4 kB] Get: 470 http://deb.debian.org/debian unstable/main amd64 libclang1-19 amd64 1:19.1.6-1+b1 [7614 kB] Get: 471 http://deb.debian.org/debian unstable/main amd64 libwrap0 amd64 7.6.q-35 [55.2 kB] Get: 472 http://deb.debian.org/debian unstable/main amd64 libdcmtk18 amd64 3.6.8-6+b2 [5624 kB] Get: 473 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 474 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 475 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 476 http://deb.debian.org/debian unstable/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3+b1 [190 kB] Get: 477 http://deb.debian.org/debian unstable/main amd64 libnsl-dev amd64 1.3.0-3+b3 [67.5 kB] Get: 478 http://deb.debian.org/debian unstable/main amd64 libwrap0-dev amd64 7.6.q-35 [21.9 kB] Get: 479 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-6 [10.4 MB] Get: 480 http://deb.debian.org/debian unstable/main amd64 libxml2-dev amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [795 kB] Get: 481 http://deb.debian.org/debian unstable/main amd64 libdcmtk-dev amd64 3.6.8-6+b2 [1045 kB] Get: 482 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.0.15-1+b2 [189 kB] Get: 483 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.22-1 [55.8 kB] Get: 484 http://deb.debian.org/debian unstable/main amd64 libdlib-data all 19.24.6+dfsg-1 [63.4 MB] Get: 485 http://deb.debian.org/debian unstable/main amd64 libdlib19.2 amd64 19.24.6+dfsg-1 [3819 kB] Get: 486 http://deb.debian.org/debian unstable/main amd64 libtbbmalloc2 amd64 2022.0.0-1 [49.1 kB] Get: 487 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 488 http://deb.debian.org/debian unstable/main amd64 libtbbbind-2-5 amd64 2022.0.0-1 [14.4 kB] Get: 489 http://deb.debian.org/debian unstable/main amd64 libtbb12 amd64 2022.0.0-1 [90.9 kB] Get: 490 http://deb.debian.org/debian unstable/main amd64 libopencv-core406t64 amd64 4.6.0+dfsg-14+b3 [1141 kB] Get: 491 http://deb.debian.org/debian unstable/main amd64 libtbb-dev amd64 2022.0.0-1 [199 kB] Get: 492 http://deb.debian.org/debian unstable/main amd64 libopencv-core-dev amd64 4.6.0+dfsg-14+b3 [1889 kB] Get: 493 http://deb.debian.org/debian unstable/main amd64 libpng-dev amd64 1.6.45-1 [367 kB] Get: 494 http://deb.debian.org/debian unstable/main amd64 libsqlite3-dev amd64 3.46.1-1 [1107 kB] Get: 495 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.1-3 [2151 kB] Get: 496 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.4-1 [158 kB] Get: 497 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.1-3 [5013 kB] Get: 498 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.13.1-2 [10.2 kB] Get: 499 http://deb.debian.org/debian unstable/main amd64 pybind11-dev all 2.13.6-1 [204 kB] Get: 500 http://deb.debian.org/debian unstable/main amd64 libdlib-dev amd64 19.24.6+dfsg-1 [2187 kB] Get: 501 http://deb.debian.org/debian unstable/main amd64 libdouble-conversion-dev amd64 3.3.0-1+b2 [61.7 kB] Get: 502 http://deb.debian.org/debian unstable/main amd64 pkg-config amd64 1.8.1-4 [14.0 kB] Get: 503 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 504 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get: 505 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10+b1 [108 kB] Get: 506 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get: 507 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10+b1 [61.1 kB] Get: 508 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-10+b1 [305 kB] Get: 509 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 510 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get: 511 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-2+b2 [70.4 kB] Get: 512 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get: 513 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2+b1 [781 kB] Get: 514 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.10-2+b1 [347 kB] Get: 515 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.10-2+b1 [618 kB] Get: 516 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.10-2+b1 [809 kB] Get: 517 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.10-2+b1 [51.3 kB] Get: 518 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.10-2+b1 [2118 kB] Get: 519 http://deb.debian.org/debian unstable/main amd64 libfreetype-dev amd64 2.13.3+dfsg-1 [622 kB] Get: 520 http://deb.debian.org/debian unstable/main amd64 uuid-dev amd64 2.40.3-1 [47.5 kB] Get: 521 http://deb.debian.org/debian unstable/main amd64 libfontconfig-dev amd64 2.15.0-2 [414 kB] Get: 522 http://deb.debian.org/debian unstable/main amd64 libfontconfig1-dev amd64 2.15.0-2 [269 kB] Get: 523 http://deb.debian.org/debian unstable/main amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1+b1 [53.3 kB] Get: 524 http://deb.debian.org/debian unstable/main amd64 libfreexl1 amd64 2.0.0-1+b3 [40.0 kB] Get: 525 http://deb.debian.org/debian unstable/main amd64 libminizip-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [61.0 kB] Get: 526 http://deb.debian.org/debian unstable/main amd64 libfreexl-dev amd64 2.0.0-1+b3 [42.1 kB] Get: 527 http://deb.debian.org/debian unstable/main amd64 libfyba0t64 amd64 4.1.1-11+b1 [113 kB] Get: 528 http://deb.debian.org/debian unstable/main amd64 libfyba-dev amd64 4.1.1-11+b1 [169 kB] Get: 529 http://deb.debian.org/debian unstable/main amd64 libgeos3.13.0 amd64 3.13.0-1 [968 kB] Get: 530 http://deb.debian.org/debian unstable/main amd64 libgeos-c1t64 amd64 3.13.0-1 [102 kB] Get: 531 http://deb.debian.org/debian unstable/main amd64 proj-data all 9.5.1-1 [6284 kB] Get: 532 http://deb.debian.org/debian unstable/main amd64 libproj25 amd64 9.5.1-1 [1420 kB] Get: 533 http://deb.debian.org/debian unstable/main amd64 libgeotiff5 amd64 1.7.3-1+b1 [68.7 kB] Get: 534 http://deb.debian.org/debian unstable/main amd64 libhdf4-0-alt amd64 4.3.0-1+b1 [269 kB] Get: 535 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.19.5-1 [11.2 kB] Get: 536 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.19.5-1 [15.2 kB] Get: 537 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.19.5-1 [514 kB] Get: 538 http://deb.debian.org/debian unstable/main amd64 libjson-c5 amd64 0.18+ds-1 [46.0 kB] Get: 539 http://deb.debian.org/debian unstable/main amd64 liburiparser1 amd64 0.9.8+dfsg-2 [45.5 kB] Get: 540 http://deb.debian.org/debian unstable/main amd64 libkmlbase1t64 amd64 1.3.0-12+b2 [50.5 kB] Get: 541 http://deb.debian.org/debian unstable/main amd64 libkmldom1t64 amd64 1.3.0-12+b2 [158 kB] Get: 542 http://deb.debian.org/debian unstable/main amd64 libkmlengine1t64 amd64 1.3.0-12+b2 [80.1 kB] Get: 543 http://deb.debian.org/debian unstable/main amd64 libnetcdf19t64 amd64 1:4.9.2-7+b1 [477 kB] Get: 544 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.5.4-2 [415 kB] Get: 545 http://deb.debian.org/debian unstable/main amd64 libodbc2 amd64 2.3.12-2 [151 kB] Get: 546 http://deb.debian.org/debian unstable/main amd64 unixodbc-common all 2.3.12-2 [8640 B] Get: 547 http://deb.debian.org/debian unstable/main amd64 libodbcinst2 amd64 2.3.12-2 [35.1 kB] Get: 548 http://deb.debian.org/debian unstable/main amd64 libogdi4.1 amd64 4.1.1+ds-5 [217 kB] Get: 549 http://deb.debian.org/debian unstable/main amd64 libgpgme11t64 amd64 1.24.1-2 [344 kB] Get: 550 http://deb.debian.org/debian unstable/main amd64 libgpgmepp6t64 amd64 1.24.1-2 [340 kB] Get: 551 http://deb.debian.org/debian unstable/main amd64 libpoppler140 amd64 24.08.0-4 [1965 kB] Get: 552 http://deb.debian.org/debian unstable/main amd64 libpq5 amd64 17.2-1+b1 [224 kB] Get: 553 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get: 554 http://deb.debian.org/debian unstable/main amd64 librttopo1 amd64 1.1.0-3+b2 [179 kB] Get: 555 http://deb.debian.org/debian unstable/main amd64 libspatialite8t64 amd64 5.1.0-3+b2 [1864 kB] Get: 556 http://deb.debian.org/debian unstable/main amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3+b1 [900 kB] Get: 557 http://deb.debian.org/debian unstable/main amd64 libgdal36 amd64 3.10.1+dfsg-1 [9242 kB] Get: 558 http://deb.debian.org/debian unstable/main amd64 libgeos-dev amd64 3.13.0-1 [58.3 kB] Get: 559 http://deb.debian.org/debian unstable/main amd64 libjbig-dev amd64 2.1-6.1+b2 [31.4 kB] Get: 560 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.6.3-1+b1 [316 kB] Get: 561 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Get: 562 http://deb.debian.org/debian unstable/main amd64 libwebpdecoder3 amd64 1.5.0-0.1 [208 kB] Get: 563 http://deb.debian.org/debian unstable/main amd64 libsharpyuv-dev amd64 1.5.0-0.1 [120 kB] Get: 564 http://deb.debian.org/debian unstable/main amd64 libwebp-dev amd64 1.5.0-0.1 [450 kB] Get: 565 http://deb.debian.org/debian unstable/main amd64 libtiffxx6 amd64 4.5.1+git230720-5 [149 kB] Get: 566 http://deb.debian.org/debian unstable/main amd64 liblerc-dev amd64 4.0.0+ds-5 [183 kB] Get: 567 http://deb.debian.org/debian unstable/main amd64 libtiff-dev amd64 4.5.1+git230720-5 [463 kB] Get: 568 http://deb.debian.org/debian unstable/main amd64 libproj-dev amd64 9.5.1-1 [135 kB] Get: 569 http://deb.debian.org/debian unstable/main amd64 libgeotiff-dev amd64 1.7.3-1+b1 [97.6 kB] Get: 570 http://deb.debian.org/debian unstable/main amd64 libgif-dev amd64 5.2.2-1+b1 [47.0 kB] Get: 571 http://deb.debian.org/debian unstable/main amd64 libnetcdf-dev amd64 1:4.9.2-7+b1 [104 kB] Get: 572 http://deb.debian.org/debian unstable/main amd64 libhdf4-alt-dev amd64 4.3.0-1+b1 [324 kB] Get: 573 http://deb.debian.org/debian unstable/main amd64 libheif-dev amd64 1.19.5-1 [50.8 kB] Get: 574 http://deb.debian.org/debian unstable/main amd64 libjson-c-dev amd64 0.18+ds-1 [74.8 kB] Get: 575 http://deb.debian.org/debian unstable/main amd64 libkmlconvenience1t64 amd64 1.3.0-12+b2 [49.8 kB] Get: 576 http://deb.debian.org/debian unstable/main amd64 libkmlregionator1t64 amd64 1.3.0-12+b2 [22.8 kB] Get: 577 http://deb.debian.org/debian unstable/main amd64 libkmlxsd1t64 amd64 1.3.0-12+b2 [31.1 kB] Get: 578 http://deb.debian.org/debian unstable/main amd64 liburiparser-dev amd64 0.9.8+dfsg-2 [26.7 kB] Get: 579 http://deb.debian.org/debian unstable/main amd64 libkml-dev amd64 1.3.0-12+b2 [662 kB] Get: 580 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.5.4-2 [165 kB] Get: 581 http://deb.debian.org/debian unstable/main amd64 libxxhash-dev amd64 0.8.3-2 [81.0 kB] Get: 582 http://deb.debian.org/debian unstable/main amd64 liblz4-dev amd64 1.9.4-4 [83.0 kB] Get: 583 http://deb.debian.org/debian unstable/main amd64 libogdi-dev amd64 4.1.1+ds-5 [35.5 kB] Get: 584 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7-dev amd64 2.5.0-2+b4 [273 kB] Get: 585 http://deb.debian.org/debian unstable/main amd64 libpcre2-32-0 amd64 10.44-5 [248 kB] Get: 586 http://deb.debian.org/debian unstable/main amd64 libpcre2-posix3 amd64 10.44-5 [60.4 kB] Get: 587 http://deb.debian.org/debian unstable/main amd64 libpcre2-dev amd64 10.44-5 [790 kB] Get: 588 http://deb.debian.org/debian unstable/main amd64 libpoppler-dev amd64 24.08.0-4 [8648 B] Get: 589 http://deb.debian.org/debian unstable/main amd64 libpoppler-private-dev amd64 24.08.0-4 [193 kB] Get: 590 http://deb.debian.org/debian unstable/main amd64 libpq-dev amd64 17.2-1+b1 [147 kB] Get: 591 http://deb.debian.org/debian unstable/main amd64 libqhull8.0 amd64 2020.2-6+b2 [246 kB] Get: 592 http://deb.debian.org/debian unstable/main amd64 libqhullcpp8.0 amd64 2020.2-6+b2 [108 kB] Get: 593 http://deb.debian.org/debian unstable/main amd64 libqhull-dev amd64 2020.2-6+b2 [522 kB] Get: 594 http://deb.debian.org/debian unstable/main amd64 librttopo-dev amd64 1.1.0-3+b2 [221 kB] Get: 595 http://deb.debian.org/debian unstable/main amd64 libspatialite-dev amd64 5.1.0-3+b2 [2025 kB] Get: 596 http://deb.debian.org/debian unstable/main amd64 libxerces-c-dev amd64 3.2.4+debian-1.3+b1 [1708 kB] Get: 597 http://deb.debian.org/debian unstable/main amd64 libodbccr2 amd64 2.3.12-2 [18.1 kB] Get: 598 http://deb.debian.org/debian unstable/main amd64 unixodbc-dev amd64 2.3.12-2 [234 kB] Get: 599 http://deb.debian.org/debian unstable/main amd64 libgdal-dev amd64 3.10.1+dfsg-1 [377 kB] Get: 600 http://deb.debian.org/debian unstable/main amd64 libsocket++1 amd64 1.12.13+git20131030.5d039ba-1+b2 [79.6 kB] Get: 601 http://deb.debian.org/debian unstable/main amd64 libgdcm3.0t64 amd64 3.0.24-5+b1 [2420 kB] Get: 602 http://deb.debian.org/debian unstable/main amd64 libgdcm-dev amd64 3.0.24-5+b1 [265 kB] Get: 603 http://deb.debian.org/debian unstable/main amd64 libgl2ps1.4 amd64 1.4.2+dfsg1-2 [41.3 kB] Get: 604 http://deb.debian.org/debian unstable/main amd64 libgl2ps-dev amd64 1.4.2+dfsg1-2 [24.8 kB] Get: 605 http://deb.debian.org/debian unstable/main amd64 libglew2.2 amd64 2.2.0-4+b2 [168 kB] Get: 606 http://deb.debian.org/debian unstable/main amd64 libglew-dev amd64 2.2.0-4+b2 [246 kB] Get: 607 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB] Get: 608 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB] Get: 609 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB] Get: 610 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.6-1 [652 kB] Get: 611 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 52.0-2+b2 [28.2 kB] Get: 612 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 52.0-2+b2 [43.4 kB] Get: 613 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get: 614 http://deb.debian.org/debian unstable/main amd64 libopenmpi40 amd64 5.0.6-3 [2360 kB] Get: 615 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-310 amd64 1.14.5+repack-3 [1395 kB] Get: 616 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-fortran-310 amd64 1.14.5+repack-3 [113 kB] Get: 617 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-310 amd64 1.14.5+repack-3 [69.3 kB] Get: 618 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-fortran-310 amd64 1.14.5+repack-3 [43.9 kB] Get: 619 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-cpp-310 amd64 1.14.5+repack-3 [133 kB] Get: 620 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-cpp-310 amd64 1.14.5+repack-3 [24.4 kB] Get: 621 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.6-3 [97.0 kB] Get: 622 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3+b1 [100 kB] Get: 623 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3+b1 [200 kB] Get: 624 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 52.0-2+b2 [636 kB] Get: 625 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1+b1 [36.6 kB] Get: 626 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.11.2-1 [254 kB] Get: 627 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 628 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 629 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 630 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 8.1.3-4 [30.4 kB] Get: 631 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 632 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 8.1.3-4 [616 kB] Get: 633 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 634 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.16.0-1 [5696 kB] Get: 635 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 636 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 637 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 638 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 639 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 640 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 641 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 642 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.6.0-1 [222 kB] Get: 643 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.16.0-1 [114 kB] Get: 644 http://deb.debian.org/debian unstable/main amd64 python3-roman all 4.2-1 [10.4 kB] Get: 645 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 646 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 647 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b2 [13.9 kB] Get: 648 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-2 [120 kB] Get: 649 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 650 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-2 [836 kB] Get: 651 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.12.14+ds-1 [9624 B] Get: 652 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1+b1 [140 kB] Get: 653 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 654 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.2.3-4 [112 kB] Get: 655 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get: 656 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 657 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 658 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 8.1.3-4 [468 kB] Get: 659 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.6-1 [3962 kB] Get: 660 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 661 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.6-3 [188 kB] Get: 662 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.6-3 [1088 kB] Get: 663 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-dev amd64 1.14.5+repack-3 [3267 kB] Get: 664 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.18 [3372 B] Get: 665 http://deb.debian.org/debian unstable/main amd64 libhdf5-mpi-dev amd64 1.14.5+repack-3 [18.7 kB] Get: 666 http://deb.debian.org/debian unstable/main amd64 libice-dev amd64 2:1.1.1-1 [73.8 kB] Get: 667 http://deb.debian.org/debian unstable/main amd64 libminc2-5.3.0t64 amd64 2.4.06-2.1+b3 [236 kB] Get: 668 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.16+dfsg-1 [1042 kB] Get: 669 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b3 [54.6 kB] Get: 670 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b3 [17.0 kB] Get: 671 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.16-1 [793 kB] Get: 672 http://deb.debian.org/debian unstable/main amd64 libvtk9.3 amd64 9.3.0+dfsg1-1.1+b3 [23.2 MB] Get: 673 http://deb.debian.org/debian unstable/main amd64 libinsighttoolkit5.3 amd64 5.3.0-7+b3 [6470 kB] Get: 674 http://deb.debian.org/debian unstable/main amd64 libjsoncpp-dev amd64 1.9.6-3 [25.0 kB] Get: 675 http://deb.debian.org/debian unstable/main amd64 libswscale8 amd64 7:7.1-3+b1 [225 kB] Get: 676 http://deb.debian.org/debian unstable/main amd64 libswscale-dev amd64 7:7.1-3+b1 [254 kB] Get: 677 http://deb.debian.org/debian unstable/main amd64 libogg-dev amd64 1.3.5-3+b2 [200 kB] Get: 678 http://deb.debian.org/debian unstable/main amd64 libtheora-dev amd64 1.1.1+dfsg.1-17 [175 kB] Get: 679 http://deb.debian.org/debian unstable/main amd64 libutfcpp-dev all 4.0.5-1 [12.9 kB] Get: 680 http://deb.debian.org/debian unstable/main amd64 libvtk9.3-qt amd64 9.3.0+dfsg1-1.1+b3 [173 kB] Get: 681 http://deb.debian.org/debian unstable/main amd64 libvtk9-java amd64 9.3.0+dfsg1-1.1+b3 [6394 kB] Get: 682 http://deb.debian.org/debian unstable/main amd64 libxrender-dev amd64 1:0.9.10-1.1+b3 [35.9 kB] Get: 683 http://deb.debian.org/debian unstable/main amd64 libxft-dev amd64 2.3.6-1+b3 [73.2 kB] Get: 684 http://deb.debian.org/debian unstable/main amd64 libxss-dev amd64 1:1.2.3-1+b3 [22.7 kB] Get: 685 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b2 [188 kB] Get: 686 http://deb.debian.org/debian unstable/main amd64 libsm-dev amd64 2:1.2.4-1 [37.7 kB] Get: 687 http://deb.debian.org/debian unstable/main amd64 libxt-dev amd64 1:1.2.1-1.2+b2 [407 kB] Get: 688 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.18 [2576 B] Get: 689 http://deb.debian.org/debian unstable/main amd64 python3-mpi4py amd64 4.0.1-7 [996 kB] Get: 690 http://deb.debian.org/debian unstable/main amd64 python3-vtk9 amd64 9.3.0+dfsg1-1.1+b3 [7218 kB] Get: 691 http://deb.debian.org/debian unstable/main amd64 tcl8.6 amd64 8.6.16+dfsg-1 [121 kB] Get: 692 http://deb.debian.org/debian unstable/main amd64 tcl8.6-dev amd64 8.6.16+dfsg-1 [1032 kB] Get: 693 http://deb.debian.org/debian unstable/main amd64 tcl amd64 8.6.14 [4032 B] Get: 694 http://deb.debian.org/debian unstable/main amd64 tcl-dev amd64 8.6.14 [6580 B] Get: 695 http://deb.debian.org/debian unstable/main amd64 tk8.6 amd64 8.6.16-1 [69.6 kB] Get: 696 http://deb.debian.org/debian unstable/main amd64 tk8.6-dev amd64 8.6.16-1 [794 kB] Get: 697 http://deb.debian.org/debian unstable/main amd64 tk amd64 8.6.14 [4076 B] Get: 698 http://deb.debian.org/debian unstable/main amd64 tk-dev amd64 8.6.14 [3896 B] Get: 699 http://deb.debian.org/debian unstable/main amd64 vtk9 amd64 9.3.0+dfsg1-1.1+b3 [20.0 kB] Get: 700 http://deb.debian.org/debian unstable/main amd64 libvtk9-dev amd64 9.3.0+dfsg1-1.1+b3 [3053 kB] Get: 701 http://deb.debian.org/debian unstable/main amd64 libqt5designer5 amd64 5.15.15-4 [2759 kB] Get: 702 http://deb.debian.org/debian unstable/main amd64 libqt5designercomponents5 amd64 5.15.15-4 [738 kB] Get: 703 http://deb.debian.org/debian unstable/main amd64 libqt5help5 amd64 5.15.15-4 [151 kB] Get: 704 http://deb.debian.org/debian unstable/main amd64 qdoc-qt5 amd64 5.15.15-4 [593 kB] Get: 705 http://deb.debian.org/debian unstable/main amd64 libqt5sql5-sqlite amd64 5.15.15+dfsg-2 [59.1 kB] Get: 706 http://deb.debian.org/debian unstable/main amd64 qhelpgenerator-qt5 amd64 5.15.15-4 [61.1 kB] Get: 707 http://deb.debian.org/debian unstable/main amd64 qt5-assistant amd64 5.15.15-4 [353 kB] Get: 708 http://deb.debian.org/debian unstable/main amd64 qtattributionsscanner-qt5 amd64 5.15.15-4 [32.9 kB] Get: 709 http://deb.debian.org/debian unstable/main amd64 qttools5-dev-tools amd64 5.15.15-4 [1048 kB] Get: 710 http://deb.debian.org/debian unstable/main amd64 qttools5-dev amd64 5.15.15-4 [193 kB] Get: 711 http://deb.debian.org/debian unstable/main amd64 qttools5-private-dev amd64 5.15.15-4 [73.9 kB] Get: 712 http://deb.debian.org/debian unstable/main amd64 libqt5opengl5t64 amd64 5.15.15+dfsg-2 [150 kB] Get: 713 http://deb.debian.org/debian unstable/main amd64 libqt5opengl5-dev amd64 5.15.15+dfsg-2 [51.5 kB] Get: 714 http://deb.debian.org/debian unstable/main amd64 libvtk9-qt-dev amd64 9.3.0+dfsg1-1.1+b3 [32.4 kB] Get: 715 http://deb.debian.org/debian unstable/main amd64 libznz3 amd64 3.0.1-9.1+b1 [10.4 kB] Get: 716 http://deb.debian.org/debian unstable/main amd64 libnifti2-2 amd64 3.0.1-9.1+b1 [75.9 kB] Get: 717 http://deb.debian.org/debian unstable/main amd64 libnifticdf2 amd64 3.0.1-9.1+b1 [52.6 kB] Get: 718 http://deb.debian.org/debian unstable/main amd64 libnifticdf-dev amd64 3.0.1-9.1+b1 [58.6 kB] Get: 719 http://deb.debian.org/debian unstable/main amd64 libniftiio2t64 amd64 3.0.1-9.1+b1 [58.8 kB] Get: 720 http://deb.debian.org/debian unstable/main amd64 libniftiio-dev amd64 3.0.1-9.1+b1 [67.9 kB] Get: 721 http://deb.debian.org/debian unstable/main amd64 libznz-dev amd64 3.0.1-9.1+b1 [10.8 kB] Get: 722 http://deb.debian.org/debian unstable/main amd64 libnifti2-dev amd64 3.0.1-9.1+b1 [95.2 kB] Get: 723 http://deb.debian.org/debian unstable/main amd64 libnifti-dev all 3.0.1-9.1 [8912 B] Get: 724 http://deb.debian.org/debian unstable/main amd64 libminc-dev amd64 2.4.06-2.1+b3 [70.0 kB] Get: 725 http://deb.debian.org/debian unstable/main amd64 libinsighttoolkit5-dev amd64 5.3.0-7+b3 [3232 kB] Fetched 699 MB in 21s (33.1 MB/s) Preconfiguring packages ... Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19849 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b3_amd64.deb ... Unpacking libapparmor1:amd64 (3.1.7-1+b3) ... Selecting previously unselected package libsystemd-shared:amd64. Preparing to unpack .../libsystemd-shared_257.2-1_amd64.deb ... Unpacking libsystemd-shared:amd64 (257.2-1) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_257.2-1_amd64.deb ... Unpacking systemd (257.2-1) ... Setting up libapparmor1:amd64 (3.1.7-1+b3) ... Setting up libsystemd-shared:amd64 (257.2-1) ... Setting up systemd (257.2-1) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. /usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring. Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20806 files and directories currently installed.) Preparing to unpack .../000-systemd-sysv_257.2-1_amd64.deb ... Unpacking systemd-sysv (257.2-1) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../001-libdbus-1-3_1.16.0-1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.16.0-1) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../002-dbus-bin_1.16.0-1_amd64.deb ... Unpacking dbus-bin (1.16.0-1) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../003-dbus-session-bus-common_1.16.0-1_all.deb ... Unpacking dbus-session-bus-common (1.16.0-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../004-libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../005-dbus-daemon_1.16.0-1_amd64.deb ... Unpacking dbus-daemon (1.16.0-1) ... Selecting previously unselected package dbus-system-bus-common. Preparing to unpack .../006-dbus-system-bus-common_1.16.0-1_all.deb ... Unpacking dbus-system-bus-common (1.16.0-1) ... Selecting previously unselected package dbus. Preparing to unpack .../007-dbus_1.16.0-1_amd64.deb ... Unpacking dbus (1.16.0-1) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../008-libffi8_3.4.6-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.6-1) ... Selecting previously unselected package libglib2.0-0t64:amd64. Preparing to unpack .../009-libglib2.0-0t64_2.82.4-1_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.82.4-1) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../010-libdrm-common_2.4.123-1_all.deb ... Unpacking libdrm-common (2.4.123-1) ... Selecting previously unselected package libdrm2:amd64. Preparing to unpack .../011-libdrm2_2.4.123-1_amd64.deb ... Unpacking libdrm2:amd64 (2.4.123-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../012-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package libdw1t64:amd64. Preparing to unpack .../013-libdw1t64_0.192-4_amd64.deb ... Unpacking libdw1t64:amd64 (0.192-4) ... Selecting previously unselected package libunwind8:amd64. 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Setting up libcom-err2:amd64 (1.47.2-1) ... Setting up file (1:5.45-3+b1) ... Setting up libogg-dev:amd64 (1.3.5-3+b2) ... Setting up libmpg123-0t64:amd64 (1.32.10-1) ... Setting up libcjson1:amd64 (1.7.18-3+b1) ... Setting up libxvidcore4:amd64 (2:1.3.7-1+b2) ... Setting up libunwind8:amd64 (1.7.2-1) ... Setting up libjbig0:amd64 (2.1-6.1+b2) ... Setting up libpcre2-16-0:amd64 (10.44-5) ... Setting up libaec0:amd64 (1.1.3-1+b1) ... Setting up gdal-data (3.10.1+dfsg-1) ... Setting up libopengl0:amd64 (1.7.0-1+b2) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up python-babel-localedata (2.16.0-1) ... Setting up libxcb-util1:amd64 (0.4.0-1+b2) ... Setting up libsnappy1v5:amd64 (1.2.1-1+b1) ... Setting up liborc-0.4-0t64:amd64 (1:0.4.40-1) ... Setting up libxcb-xkb1:amd64 (1.17.0-2+b1) ... Setting up libxcb-image0:amd64 (0.4.0-2+b2) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libdw1t64:amd64 (0.192-4) ... Setting up libaom-dev:amd64 (3.11.0-1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up tzdata (2024b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Feb 16 10:13:18 UTC 2026. Universal Time is now: Mon Feb 16 10:13:18 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libcap2-bin (1:2.66-5+b1) ... Setting up libxcb-present0:amd64 (1.17.0-2+b1) ... Setting up mariadb-common (1:11.4.4-3) ... update-alternatives: using /etc/mysql/mariadb.cnf to provide /etc/mysql/my.cnf (my.cnf) in auto mode Setting up libasound2-data (1.2.13-1) ... Setting up libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1+b1) ... Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.13.3-1) ... Setting up libpcre2-32-0:amd64 (10.44-5) ... Setting up libblas3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb-xinerama0:amd64 (1.17.0-2+b1) ... Setting up libunbound8:amd64 (1.22.0-1+b1) ... Setting up libutfcpp-dev (4.0.5-1) ... Setting up libpkgconf3:amd64 (1.8.1-4) ... Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-3) ... Setting up libasound2t64:amd64 (1.2.13-1+b1) ... Setting up libmunge2:amd64 (0.5.15-4+b1) ... Setting up libexpat1-dev:amd64 (2.6.4-1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ... Setting up qt5-qmake-bin (5.15.15+dfsg-2) ... Setting up libva2:amd64 (2.22.0-1+b1) ... Setting up libsqlite3-dev:amd64 (3.46.1-1) ... Setting up libwrap0:amd64 (7.6.q-35) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libsvtav1enc2:amd64 (2.3.0+dfsg-1) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-3+b1) ... Setting up libepoxy0:amd64 (1.5.10-2) ... Setting up libnspr4:amd64 (2:4.36-1) ... Setting up gnupg-l10n (2.2.46-1) ... Setting up libxcb-sync1:amd64 (1.17.0-2+b1) ... Setting up libjsoncpp26:amd64 (1.9.6-3) ... Setting up uuid-dev:amd64 (2.40.3-1) ... Setting up libavahi-common-data:amd64 (0.8-16) ... Setting up libdbus-1-3:amd64 (1.16.0-1) ... Setting up libfftw3-quad3:amd64 (3.3.10-2+b1) ... Setting up libfribidi0:amd64 (1.0.16-1) ... Setting up libopus0:amd64 (1.5.2-2) ... Setting up libproc2-0:amd64 (2:4.0.4-6) ... Setting up comerr-dev:amd64 (2.1-1.47.2-1) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libssl-dev:amd64 (3.4.0-2) ... Setting up libpng16-16t64:amd64 (1.6.45-1) ... Setting up libhwloc15:amd64 (2.11.2-1) ... Setting up libimath-3-1-29t64:amd64 (3.1.12-1+b2) ... Setting up libvorbis0a:amd64 (1.3.7-2+b1) ... Setting up libtcl8.6:amd64 (8.6.16+dfsg-1) ... Setting up autopoint (0.22.5-4) ... Setting up icu-devtools (72.1-6) ... Setting up libmariadb3:amd64 (1:11.4.4-3) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up unixodbc-common (2.3.12-2) ... Setting up libsocket++1:amd64 (1.12.13+git20131030.5d039ba-1+b2) ... Setting up libqhullcpp8.0:amd64 (2020.2-6+b2) ... Setting up libnifticdf-dev:amd64 (3.0.1-9.1+b1) ... Setting up libpcsclite1:amd64 (2.3.1-1) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libsensors5:amd64 (1:3.6.0-10+b1) ... Setting up liblerc-dev:amd64 (4.0.0+ds-5) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libltdl7:amd64 (2.5.4-2) ... Setting up libfftw3-double3:amd64 (3.3.10-2+b1) ... Setting up libglapi-mesa:amd64 (24.3.3-1) ... Setting up libqhull-dev:amd64 (2020.2-6+b2) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:amd64 (14.2.0-13) ... Setting up libdouble-conversion-dev:amd64 (3.3.0-1+b2) ... Setting up libvulkan1:amd64 (1.3.296.0-1) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:amd64 (1.6.0-2) ... Setting up libxxhash-dev:amd64 (0.8.3-2) ... Setting up libwebp7:amd64 (1.5.0-0.1) ... Setting up liblzma-dev:amd64 (5.6.3-1+b1) ... Setting up libgif7:amd64 (5.2.2-1+b1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libodbc2:amd64 (2.3.12-2) ... Setting up liburiparser1:amd64 (0.9.8+dfsg-2) ... Setting up libffi8:amd64 (3.4.6-1) ... Setting up libnuma1:amd64 (2.0.18-1+b1) ... Setting up libpcre2-posix3:amd64 (10.44-5) ... Setting up libfyba0t64:amd64 (4.1.1-11+b1) ... Setting up libvpx9:amd64 (1.15.0-1) ... Setting up dwz (0.15-1+b1) ... Setting up libdav1d7:amd64 (1.5.0-1+b1) ... Setting up libmtdev1t64:amd64 (1.1.6-1.2+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b2) ... Setting up libgif-dev:amd64 (5.2.2-1+b1) ... Setting up libxshmfence1:amd64 (1.3-1+b3) ... Setting up at-spi2-common (2.55.0-1) ... Setting up cfortran (20210827-1) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up libxcb-randr0:amd64 (1.17.0-2+b1) ... Setting up dbus-session-bus-common (1.16.0-1) ... Setting up libwrap0-dev:amd64 (7.6.q-35) ... Setting up librav1e0.7:amd64 (0.7.1-9) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libznz3:amd64 (3.0.1-9.1+b1) ... Setting up libassuan9:amd64 (3.0.1-2) ... Setting up procps (2:4.0.4-6) ... Setting up libjson-perl (4.10000-1) ... Setting up libniftiio2t64:amd64 (3.0.1-9.1+b1) ... Setting up libblosc1:amd64 (1.21.5+ds-1+b2) ... Setting up libnl-3-200:amd64 (3.7.0-0.3+b1) ... Setting up libpsm2-2 (11.2.185-2.1) ... Setting up openmpi-common (5.0.6-3) ... Setting up libtasn1-6:amd64 (4.19.0-3+b3) ... Setting up libmd4c0:amd64 (0.5.2-2+b1) ... Setting up libopenjp2-7:amd64 (2.5.0-2+b4) ... Setting up libx11-6:amd64 (2:1.8.10-2) ... Setting up libthai-data (0.1.29-2) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libabsl20230802:amd64 (20230802.1-4) ... Setting up libngtcp2-16:amd64 (1.9.1-1) ... Setting up sgml-base (1.31) ... Setting up cmake-data (3.31.3-1) ... Setting up librhash1:amd64 (1.4.5-1) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libboost-dev:amd64 (1.83.0.2+b2) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1+b3) ... Setting up libwayland-egl1:amd64 (1.23.0-1+b1) ... Setting up libmbedcrypto16:amd64 (3.6.2-3) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libopengl-dev:amd64 (1.7.0-1+b2) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up dbus-system-bus-common (1.16.0-1) ... useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Setting up libfido2-1:amd64 (1.15.0-1+b1) ... Setting up libde265-0:amd64 (1.0.15-1+b2) ... Setting up libsharpyuv-dev:amd64 (1.5.0-0.1) ... Setting up libkmlbase1t64:amd64 (1.3.0-12+b2) ... Setting up libtasn1-6-dev:amd64 (4.19.0-3+b3) ... Setting up openssl (3.4.0-2) ... Setting up libwebpmux3:amd64 (1.5.0-0.1) ... Setting up libtiffxx6:amd64 (4.5.1+git230720-5) ... Setting up libdeflate-dev:amd64 (1.22-1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libyuv0:amd64 (0.0.1899.20250103-1) ... Setting up libxcomposite1:amd64 (1:0.4.6-1) ... Setting up libjson-c5:amd64 (0.18+ds-1) ... Setting up libevdev2:amd64 (1.13.3+dfsg-1) ... Setting up readline-common (8.2-6) ... Setting up libicu-dev:amd64 (72.1-6) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libdlib-data (19.24.6+dfsg-1) ... Setting up iso-codes (4.17.0-1) ... Setting up dbus-bin (1.16.0-1) ... Setting up libbrotli-dev:amd64 (1.1.0-2+b6) ... Setting up libzvbi-common (0.2.43-2) ... Setting up qtchooser (66-2) ... Setting up libmp3lame0:amd64 (3.100-6+b3) ... Setting up libblas-dev:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libsz2:amd64 (1.1.3-1+b1) ... Setting up libvorbisenc2:amd64 (1.3.7-2+b1) ... Setting up dcmtk-data (3.6.8-6) ... Setting up libdvdnav4:amd64 (6.1.1-3+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libodbccr2:amd64 (2.3.12-2) ... Setting up gdal-plugins:amd64 (3.10.1+dfsg-1) ... Setting up libwacom-common (2.13.0-1) ... Setting up libbz2-dev:amd64 (1.0.8-6) ... Setting up libxkbcommon0:amd64 (1.7.0-2) ... Setting up libwayland-client0:amd64 (1.23.0-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:amd64 (14.2.0-13) ... Setting up libksba8:amd64 (1.6.7-2+b1) ... Setting up pinentry-curses (1.3.1-2) ... Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2+b1) ... Setting up libgdcm3.0t64:amd64 (3.0.24-5+b1) ... Setting up libllvm19:amd64 (1:19.1.6-1+b1) ... Setting up libwayland-server0:amd64 (1.23.0-1+b1) ... Setting up libx11-xcb1:amd64 (2:1.8.10-2) ... Setting up libice6:amd64 (2:1.1.1-1) ... Setting up libjsoncpp-dev:amd64 (1.9.6-3) ... Setting up libcharls-dev:amd64 (2.4.2-2+b2) ... Setting up libodbcinst2:amd64 (2.3.12-2) ... Setting up tcl8.6 (8.6.16+dfsg-1) ... Setting up liblapack3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libgdcm-dev (3.0.24-5+b1) ... Setting up libkmlxsd1t64:amd64 (1.3.0-12+b2) ... Setting up gettext (0.22.5-4) ... Setting up libarpack2t64:amd64 (3.9.1-4) ... Setting up libxdamage1:amd64 (1:1.1.6-1+b2) ... Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-3) ... Setting up libclang1-19 (1:19.1.6-1+b1) ... Setting up libxau-dev:amd64 (1:1.0.11-1) ... Setting up qt5-qmake:amd64 (5.15.15+dfsg-2) ... Setting up libpcre2-dev:amd64 (10.44-5) ... Setting up libzvbi0t64:amd64 (0.2.43-2) ... Setting up nettle-dev:amd64 (3.10-1+b1) ... Setting up libwoff1:amd64 (1.0.2-2+b2) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b3) ... Setting up libice-dev:amd64 (2:1.1.1-1) ... Setting up libtool (2.5.4-2) ... Setting up libblosc-dev:amd64 (1.21.5+ds-1+b2) ... Setting up libfftw3-bin (3.3.10-2+b1) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up fontconfig-config (2.15.0-2) ... Setting up libjson-c-dev:amd64 (0.18+ds-1) ... Setting up libgeos-c1t64:amd64 (3.13.0-1) ... Setting up libfyba-dev:amd64 (4.1.1-11+b1) ... Setting up libwebpdemux2:amd64 (1.5.0-0.1) ... Setting up tcl8.6-dev:amd64 (8.6.16+dfsg-1) ... Setting up libevent-openssl-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libniftiio-dev:amd64 (3.0.1-9.1+b1) ... Setting up libpng-dev:amd64 (1.6.45-1) ... Setting up libaec-dev:amd64 (1.1.3-1+b1) ... Setting up libavahi-common3:amd64 (0.8-16) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3+b1) ... Setting up libjbig-dev:amd64 (2.1-6.1+b2) ... Setting up libxext6:amd64 (2:1.3.4-1+b3) ... Setting up libidn2-0:amd64 (2.3.7-2+b1) ... Setting up libnss3:amd64 (2:3.107-1) ... Setting up dbus-daemon (1.16.0-1) ... Setting up libdcmtk18:amd64 (3.6.8-6+b2) ... Setting up libsvtav1enc-dev:amd64 (2.3.0+dfsg-1) ... Setting up libsuperlu7:amd64 (7.0.0+dfsg1-2) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-13) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b4) ... Setting up libtbbbind-2-5:amd64 (2022.0.0-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up liburiparser-dev (0.9.8+dfsg-2) ... Setting up libnuma-dev:amd64 (2.0.18-1+b1) ... Setting up libdlib19.2:amd64 (19.24.6+dfsg-1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b1) ... Setting up librist4:amd64 (0.2.11+dfsg-1) ... Setting up libkmldom1t64:amd64 (1.3.0-12+b2) ... Setting up dh-autoreconf (20) ... Setting up libminizip-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libltdl-dev:amd64 (2.5.4-2) ... Setting up libthai0:amd64 (0.1.29-2+b1) ... Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. Setting up libvorbisfile3:amd64 (1.3.7-2+b1) ... Setting up libxdmcp-dev:amd64 (1:1.1.5-1) ... Setting up libxml2-dev:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libglib2.0-0t64:amd64 (2.82.4-1) ... Setting up libwebp-dev:amd64 (1.5.0-0.1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libllvm17t64:amd64 (1:17.0.6-20+b1) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libtiff-dev:amd64 (4.5.1+git230720-5) ... Setting up libopenjp2-7-dev:amd64 (2.5.0-2+b4) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b3) ... Setting up libgeos-dev (3.13.0-1) ... Setting up dbus (1.16.0-1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libdav1d-dev:amd64 (1.5.0-1+b1) ... Setting up libopenexr-3-1-30:amd64 (3.1.5-5.1+b4) ... Setting up libznz-dev:amd64 (3.0.1-9.1+b1) ... Setting up shared-mime-info (2.4-5+b1) ... Setting up libp11-kit0:amd64 (0.25.5-3) ... Setting up libxinerama1:amd64 (2:1.1.4-3+b3) ... Setting up libx265-209:amd64 (3.6-3+b1) ... Setting up libxkbcommon-x11-0:amd64 (1.7.0-2) ... Setting up libnifti2-2:amd64 (3.0.1-9.1+b1) ... Setting up liblapack-dev:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libxrandr2:amd64 (2:1.5.4-1+b2) ... Setting up liblz4-dev:amd64 (1.9.4-4) ... Setting up pkg-config:amd64 (1.8.1-4) ... Setting up libgav1-1:amd64 (0.19.0-3) ... Setting up libssh2-1-dev:amd64 (1.11.1-1) ... Setting up libidn2-dev:amd64 (2.3.7-2+b1) ... Setting up libjs-sphinxdoc (8.1.3-4) ... Setting up libssh-4:amd64 (0.11.1-1) ... Setting up libevent-extra-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up libhdf4-0-alt:amd64 (4.3.0-1+b1) ... Setting up libmariadb-dev (1:11.4.4-3) ... Setting up libreadline8t64:amd64 (8.2-6) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up librttopo1:amd64 (1.1.0-3+b2) ... Setting up librav1e-dev:amd64 (0.7.1-9) ... Setting up libyuv-dev:amd64 (0.0.1899.20250103-1) ... Setting up libnl-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up libfreexl1:amd64 (2.0.0-1+b3) ... Setting up libva-drm2:amd64 (2.22.0-1+b1) ... Setting up groff-base (1.23.0-7) ... Setting up libvdpau1:amd64 (1.5-3+b1) ... Setting up libwayland-cursor0:amd64 (1.23.0-1+b1) ... Setting up xml-core (0.19) ... Setting up tcl (8.6.14) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up gpgconf (2.2.46-1) ... Setting up libpam-systemd:amd64 (257.2-1) ... Setting up libharfbuzz0b:amd64 (10.1.0-2) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1+b1) ... Setting up libarmadillo14 (1:14.2.1+dfsg-1+b1) ... Setting up libhwloc-dev:amd64 (2.11.2-1) ... Setting up libnifti2-dev (3.0.1-9.1+b1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up libxss1:amd64 (1:1.2.3-1+b3) ... Setting up libfontconfig1:amd64 (2.15.0-2) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libbluray2:amd64 (1:1.3.4-1+b2) ... Setting up gfortran-14 (14.2.0-13) ... Setting up libsuperlu-dev:amd64 (7.0.0+dfsg1-2) ... Setting up libnifti-dev (3.0.1-9.1) ... Setting up libva-x11-2:amd64 (2.22.0-1+b1) ... Setting up libsm6:amd64 (2:1.2.4-1) ... Setting up libarchive13t64:amd64 (3.7.4-1.1) ... Setting up libpython3.13-stdlib:amd64 (3.13.1-3) ... Setting up libfftw3-dev:amd64 (3.3.10-2+b1) ... Setting up unixodbc-dev:amd64 (2.3.12-2) ... Setting up libopenmpt0t64:amd64 (0.7.12-1) ... Setting up libavahi-client3:amd64 (0.8-16) ... Setting up gpg (2.2.46-1) ... Setting up libgudev-1.0-0:amd64 (238-6) ... Setting up libgstreamer1.0-0:amd64 (1.24.11-1) ... Setcap worked! gst-ptp-helper is not suid! Setting up libp11-kit-dev:amd64 (0.25.5-3) ... Setting up libpython3-stdlib:amd64 (3.13.1-2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libjxl0.10:amd64 (0.10.4-2) ... Setting up libpython3.13:amd64 (3.13.1-3) ... Setting up libgnutls30t64:amd64 (3.8.8-2) ... Setting up libmariadb-dev-compat (1:11.4.4-3) ... Setting up libgnutls-openssl27t64:amd64 (3.8.8-2) ... Setting up gtk-update-icon-cache (4.16.12+ds-1) ... Setting up librttopo-dev:amd64 (1.1.0-3+b2) ... Setting up libnghttp2-dev:amd64 (1.64.0-1) ... Setting up libibverbs1:amd64 (52.0-2+b2) ... Setting up fontconfig (2.15.0-2) ... Regenerating fonts cache... done. Setting up libavif16:amd64 (1.1.1-1) ... Setting up libxft2:amd64 (2.3.6-1+b3) ... Setting up libarpack2-dev:amd64 (3.9.1-4) ... Setting up gpg-agent (2.2.46-1) ... Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket' -> '/usr/lib/systemd/user/gpg-agent-browser.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket' -> '/usr/lib/systemd/user/gpg-agent-extra.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket' -> '/usr/lib/systemd/user/gpg-agent-ssh.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent.socket' -> '/usr/lib/systemd/user/gpg-agent.socket'. Setting up libxcb1-dev:amd64 (1.17.0-2+b1) ... Setting up libatk1.0-0t64:amd64 (2.55.0-1) ... Setting up libzmq5:amd64 (4.3.5-1+b3) ... Setting up openjdk-21-jre-headless:amd64 (21.0.6~6ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libxi6:amd64 (2:1.8.2-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up ibverbs-providers:amd64 (52.0-2+b2) ... Setting up libogdi4.1:amd64 (4.1.1+ds-5) ... Setting up python3.13 (3.13.1-3) ... Setting up libwacom9:amd64 (2.13.0-1) ... Setting up libsm-dev:amd64 (2:1.2.4-1) ... Setting up libdrm-radeon1:amd64 (2.4.123-1) ... Setting up openssh-client (1:9.9p1-3) ... Setting up libfreexl-dev:amd64 (2.0.0-1+b3) ... Setting up libxtst6:amd64 (2:1.2.3-1.1+b3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.16-1) ... Setting up libxcursor1:amd64 (1:1.2.3-1) ... Setting up gpgsm (2.2.46-1) ... Setting up libpango-1.0-0:amd64 (1.55.0+ds-3) ... Setting up libdrm-intel1:amd64 (2.4.123-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libx11-dev:amd64 (2:1.8.10-2) ... Setting up libcloudproviders0:amd64 (0.3.6-1+b1) ... Setting up libgstreamer-plugins-base1.0-0:amd64 (1.24.11-1) ... Setting up python3 (3.13.1-2) ... Setting up libtbb12:amd64 (2022.0.0-1) ... Setting up libkmlengine1t64:amd64 (1.3.0-12+b2) ... Setting up python3-autocommand (2.2.2-3) ... Setting up libhwloc-plugins:amd64 (2.11.2-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'. Setting up python3-markupsafe (2.1.5-1+b2) ... Setting up libavutil59:amd64 (7:7.1-3+b1) ... Setting up libcairo2:amd64 (1.18.2-2) ... Setting up libldap-2.5-0:amd64 (2.5.19+dfsg-1) ... Setting up libcolord2:amd64 (1.4.7-1+b2) ... Setting up libpsl-dev:amd64 (0.21.2-1.1+b1) ... Setting up libinput-bin (1.26.2-1) ... Setting up libfreetype-dev:amd64 (2.13.3+dfsg-1) ... Setting up libdconf1:amd64 (0.40.0-4+b3) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3+b1) ... Setting up dirmngr (2.2.46-1) ... Created symlink '/etc/systemd/user/sockets.target.wants/dirmngr.socket' -> '/usr/lib/systemd/user/dirmngr.socket'. Setting up dbus-user-session (1.16.0-1) ... Setting up python3-roman (4.2-1) ... Setting up libswresample5:amd64 (7:7.1-3+b1) ... Setting up libqt5core5t64:amd64 (5.15.15+dfsg-2) ... Setting up libswscale8:amd64 (7:7.1-3+b1) ... Setting up python3-jinja2 (3.1.3-2) ... Setting up python3-pygments (2.18.0+dfsg-2) ... Setting up python3-packaging (24.2-1) ... Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up libgnutls-dane0t64:amd64 (3.8.8-2) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up python3-certifi (2024.12.14+ds-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up libgssrpc4t64:amd64 (1.21.3-3) ... Setting up libldap-dev:amd64 (2.5.19+dfsg-1) ... Setting up libatspi2.0-0t64:amd64 (2.55.0-1) ... Setting up libpython3.13-dev:amd64 (3.13.1-3) ... Setting up sphinx-common (8.1.3-4) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2+b2) ... Setting up qtattributionsscanner-qt5 (5.15.15-4) ... Setting up libavif-dev:amd64 (1.1.1-1) ... Setting up libevent-dev (2.1.12-stable-10+b1) ... Setting up python3-idna (3.8-2) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up libpmix2t64:amd64 (5.0.6-1) ... Setting up tcl-dev:amd64 (8.6.14) ... Setting up python3-urllib3 (2.2.3-4) ... Setting up libxext-dev:amd64 (2:1.3.4-1+b3) ... Setting up libsrt1.5-gnutls:amd64 (1.5.4-1) ... Setting up libtheora0:amd64 (1.1.1+dfsg.1-17) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up gnupg (2.2.46-1) ... Setting up libqt5sql5t64:amd64 (5.15.15+dfsg-2) ... Setting up librdmacm1t64:amd64 (52.0-2+b2) ... Setting up libcairo-gobject2:amd64 (1.18.2-2) ... Setting up libgpgme11t64:amd64 (1.24.1-2) ... Setting up libtbb-dev:amd64 (2022.0.0-1) ... Setting up libkmlconvenience1t64:amd64 (1.3.0-12+b2) ... Setting up libpangoft2-1.0-0:amd64 (1.55.0+ds-3) ... Setting up libxrender-dev:amd64 (1:0.9.10-1.1+b3) ... Setting up libogdi-dev (4.1.1+ds-5) ... Setting up libcups2t64:amd64 (2.4.10-2+b1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.9.1-1) ... Setting up libhsakmt1:amd64 (6.1.2+ds-1) ... Setting up libpangocairo-1.0-0:amd64 (1.55.0+ds-3) ... Setting up libkadm5clnt-mit12:amd64 (1.21.3-3) ... Setting up python3-imagesize (1.4.1-1) ... Setting up default-libmysqlclient-dev:amd64 (1.1.1) ... Setting up libgnutls28-dev:amd64 (3.8.8-2) ... Setting up libavutil-dev:amd64 (7:7.1-3+b1) ... Setting up libatk-bridge2.0-0t64:amd64 (2.55.0-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up tk8.6 (8.6.16-1) ... Setting up libfabric1:amd64 (1.17.0-3.1) ... Setting up libinput10:amd64 (1.26.2-1) ... Setting up libgpgmepp6t64:amd64 (1.24.1-2) ... Setting up mesa-libgallium:amd64 (24.3.3-1) ... Setting up libvulkan-dev:amd64 (1.3.296.0-1) ... Setting up libqt5dbus5t64:amd64 (5.15.15+dfsg-2) ... Setting up libpython3-dev:amd64 (3.13.1-2) ... Setting up libkmlregionator1t64:amd64 (1.3.0-12+b2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up libqt5sql5-sqlite:amd64 (5.15.15+dfsg-2) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up libcurl4t64:amd64 (8.11.1-1) ... Setting up libkdb5-10t64:amd64 (1.21.3-3) ... Setting up libgbm1:amd64 (24.3.3-1) ... Setting up libswresample-dev:amd64 (7:7.1-3+b1) ... Setting up libfontconfig-dev:amd64 (2.15.0-2) ... Setting up python3-defusedxml (0.7.1-3) ... Setting up python3-charset-normalizer (3.4.0-1+b1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up qdoc-qt5 (5.15.15-4) ... Setting up libqt5concurrent5t64:amd64 (5.15.15+dfsg-2) ... Setting up libqt5positioning5:amd64 (5.15.15+dfsg-3) ... Setting up python3-typeguard (4.4.1-1) ... Setting up libgl1-mesa-dri:amd64 (24.3.3-1) ... Setting up libqt5network5t64:amd64 (5.15.15+dfsg-2) ... Setting up libpq5:amd64 (17.2-1+b1) ... Setting up libcurl3t64-gnutls:amd64 (8.11.1-1) ... Setting up libqt5xml5t64:amd64 (5.15.15+dfsg-2) ... Setting up debhelper (13.23) ... Setting up libpq-dev (17.2-1+b1) ... Setting up dconf-service (0.40.0-4+b3) ... Setting up libqt5test5t64:amd64 (5.15.15+dfsg-2) ... Setting up libxerces-c3.2t64:amd64 (3.2.4+debian-1.3+b1) ... Setting up libibverbs-dev:amd64 (52.0-2+b2) ... Setting up libxss-dev:amd64 (1:1.2.3-1+b3) ... Setting up pybind11-dev (2.13.6-1) ... Setting up librsvg2-2:amd64 (2.59.2+dfsg-1) ... Setting up qtbase5-dev-tools (5.15.15+dfsg-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up libegl-mesa0:amd64 (24.3.3-1) ... Setting up libtheora-dev:amd64 (1.1.1+dfsg.1-17) ... Setting up libcfitsio10t64:amd64 (4.5.0-5) ... Setting up libxt-dev:amd64 (1:1.2.1-1.2+b2) ... Setting up libqt5qml5:amd64 (5.15.15+dfsg-3) ... Setting up libxerces-c-dev:amd64 (3.2.4+debian-1.3+b1) ... Setting up libswscale-dev:amd64 (7:7.1-3+b1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libavcodec61:amd64 (7:7.1-3+b1) ... Setting up libqt5webchannel5:amd64 (5.15.15-2) ... Setting up libhdf5-310:amd64 (1.14.5+repack-3) ... Setting up libnsl-dev:amd64 (1.3.0-3+b3) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-2) ... Setting up libkadm5srv-mit12:amd64 (1.21.3-3) ... Setting up libegl1:amd64 (1.7.0-1+b2) ... Setting up cmake (3.31.3-1) ... Setting up libpoppler140:amd64 (24.08.0-4) ... Setting up libqt5sensors5:amd64 (5.15.15-2) ... Setting up tk (8.6.14) ... Setting up libhdf5-fortran-310:amd64 (1.14.5+repack-3) ... Setting up libxft-dev:amd64 (2.3.6-1+b3) ... Setting up krb5-multidev:amd64 (1.21.3-3) ... Setting up libhdf5-cpp-310:amd64 (1.14.5+repack-3) ... Setting up python3-pkg-resources (75.6.0-1) ... Setting up libpoppler-dev:amd64 (24.08.0-4) ... Setting up libkml-dev:amd64 (1.3.0-12+b2) ... Setting up libhdf5-hl-310:amd64 (1.14.5+repack-3) ... Setting up libnetcdf19t64:amd64 (1:4.9.2-7+b1) ... Setting up libqt5qmlmodels5:amd64 (5.15.15+dfsg-3) ... Setting up libfontconfig1-dev:amd64 (2.15.0-2) ... Setting up libglx-mesa0:amd64 (24.3.3-1) ... Setting up libcfitsio-dev:amd64 (4.5.0-5) ... Setting up libglx0:amd64 (1.7.0-1+b2) ... Setting up dconf-gsettings-backend:amd64 (0.40.0-4+b3) ... Setting up libproj25:amd64 (9.5.1-1) ... Setting up python3-babel (2.16.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up libdcmtk-dev (3.6.8-6+b2) ... Setting up libavcodec-dev:amd64 (7:7.1-3+b1) ... Setting up libpoppler-private-dev:amd64 (24.08.0-4) ... Setting up libavformat61:amd64 (7:7.1-3+b1) ... Setting up libgeotiff5:amd64 (1.7.3-1+b1) ... Setting up libqt5qmlworkerscript5:amd64 (5.15.15+dfsg-3) ... Setting up libkrb5-dev:amd64 (1.21.3-3) ... Setting up libgl1:amd64 (1.7.0-1+b2) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up libcurl4-openssl-dev:amd64 (8.11.1-1) ... Setting up libproj-dev:amd64 (9.5.1-1) ... Setting up libglew2.2:amd64 (2.2.0-4+b2) ... Setting up tk8.6-dev:amd64 (8.6.16-1) ... Setting up libglx-dev:amd64 (1.7.0-1+b2) ... Setting up libminc2-5.3.0t64:amd64 (2.4.06-2.1+b3) ... Setting up libopencv-core406t64:amd64 (4.6.0+dfsg-14+b3) ... Setting up libgl-dev:amd64 (1.7.0-1+b2) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up libspatialite8t64:amd64 (5.1.0-3+b2) ... Setting up libhdf5-hl-cpp-310:amd64 (1.14.5+repack-3) ... Setting up libhdf5-hl-fortran-310:amd64 (1.14.5+repack-3) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up libegl-dev:amd64 (1.7.0-1+b2) ... Setting up libgeotiff-dev:amd64 (1.7.3-1+b1) ... Setting up libavformat-dev:amd64 (7:7.1-3+b1) ... Setting up libgl2ps1.4 (1.4.2+dfsg1-2) ... Setting up libqt5gui5t64:amd64 (5.15.15+dfsg-2) ... Setting up tk-dev:amd64 (8.6.14) ... Setting up libgtk-3-0t64:amd64 (3.24.43-4) ... Setting up libhdf5-dev (1.14.5+repack-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libglu1-mesa-dev:amd64 (9.0.2-1.1+b3) ... Setting up libnetcdf-dev (1:4.9.2-7+b1) ... Setting up libspatialite-dev:amd64 (5.1.0-3+b2) ... Setting up libopencv-core-dev:amd64 (4.6.0+dfsg-14+b3) ... Setting up libminc-dev:amd64 (2.4.06-2.1+b3) ... Setting up libqt5quick5:amd64 (5.15.15+dfsg-3) ... Setting up libqt5quickshapes5:amd64 (5.15.15+dfsg-3) ... Setting up libopenmpi40:amd64 (5.0.6-3) ... Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-2) ... Setting up libgl2ps-dev (1.4.2+dfsg1-2) ... Setting up libhdf5-openmpi-310:amd64 (1.14.5+repack-3) ... Setting up libqt5help5:amd64 (5.15.15-4) ... Setting up qt5-qmltooling-plugins:amd64 (5.15.15+dfsg-3) ... Setting up libqt5quickwidgets5:amd64 (5.15.15+dfsg-3) ... Setting up libarmadillo-dev (1:14.2.1+dfsg-1+b1) ... Setting up libdlib-dev:amd64 (19.24.6+dfsg-1) ... Setting up libhdf5-openmpi-fortran-310:amd64 (1.14.5+repack-3) ... Setting up libglew-dev:amd64 (2.2.0-4+b2) ... Setting up libvtk9.3:amd64 (9.3.0+dfsg1-1.1+b3) ... Setting up libhdf4-alt-dev (4.3.0-1+b1) ... Setting up vtk9 (9.3.0+dfsg1-1.1+b3) ... Setting up libinsighttoolkit5.3 (5.3.0-7+b3) ... Setting up libqt5opengl5t64:amd64 (5.15.15+dfsg-2) ... Setting up libqt5quickparticles5:amd64 (5.15.15+dfsg-3) ... Setting up openmpi-bin (5.0.6-3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/mpiexec.1.gz because associated file /usr/share/man/man1/mpiexec.openmpi.1.gz (of link group mpirun) doesn't exist update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-2) ... Setting up libhdf5-openmpi-hl-310:amd64 (1.14.5+repack-3) ... Setting up libqt5quicktest5:amd64 (5.15.15+dfsg-3) ... Setting up libhdf5-openmpi-hl-fortran-310:amd64 (1.14.5+repack-3) ... Setting up libvtk9.3-qt:amd64 (9.3.0+dfsg1-1.1+b3) ... Setting up libqt5designer5:amd64 (5.15.15-4) ... Setting up libhdf5-openmpi-hl-cpp-310:amd64 (1.14.5+repack-3) ... Setting up qtdeclarative5-dev-tools (5.15.15+dfsg-3) ... Setting up libhdf5-openmpi-cpp-310:amd64 (1.14.5+repack-3) ... Setting up mpi-default-bin (1.18) ... Setting up qhelpgenerator-qt5 (5.15.15-4) ... Setting up libqt5webkit5:amd64 (5.212.0~alpha4-42) ... Setting up libqt5designercomponents5:amd64 (5.15.15-4) ... Setting up python3-mpi4py (4.0.1-7) ... Setting up libvtk9-java (9.3.0+dfsg1-1.1+b3) ... Setting up qtbase5-dev:amd64 (5.15.15+dfsg-2) ... Setting up qt5-assistant (5.15.15-4) ... Setting up qttools5-dev-tools (5.15.15-4) ... Setting up qtdeclarative5-dev:amd64 (5.15.15+dfsg-3) ... Setting up python3-vtk9 (9.3.0+dfsg1-1.1+b3) ... /usr/lib/python3/dist-packages/vtkmodules/util/vtkMethodParser.py:304: SyntaxWarning: invalid escape sequence '\S' patn = re.compile (" \S") Setting up libqt5opengl5-dev:amd64 (5.15.15+dfsg-2) ... Setting up libqt5webkit5-dev:amd64 (5.212.0~alpha4-42) ... Setting up qttools5-dev:amd64 (5.15.15-4) ... Setting up qttools5-private-dev:amd64 (5.15.15-4) ... Setting up libheif-plugin-dav1d:amd64 (1.19.5-1) ... Setting up libheif-plugin-libde265:amd64 (1.19.5-1) ... Setting up libheif1:amd64 (1.19.5-1) ... Setting up libheif-dev:amd64 (1.19.5-1) ... Setting up libgdal36:amd64 (3.10.1+dfsg-1) ... Setting up libgdal-dev (3.10.1+dfsg-1) ... Processing triggers for libc-bin (2.40-5) ... Processing triggers for systemd (257.2-1) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureSign_Root_CA12.pem Adding debian:SecureSign_Root_CA14.pem Adding debian:SecureSign_Root_CA15.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_CYBER_Root_CA.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up openjdk-21-jre:amd64 (21.0.6~6ea-1) ... Setting up openjdk-21-jdk-headless:amd64 (21.0.6~6ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up default-jre (2:1.21-76) ... Setting up openjdk-21-jdk:amd64 (21.0.6~6ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up default-jdk-headless (2:1.21-76) ... Setting up default-jdk (2:1.21-76) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (8.1.3-4) ... Setting up libpmix-dev:amd64 (5.0.6-1) ... Setting up libopenmpi-dev:amd64 (5.0.6-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libhdf5-openmpi-dev (1.14.5+repack-3) ... update-alternatives: using /usr/bin/h5pcc.openmpi to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-openmpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.openmpi because link group mpi has changed slave links update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up mpi-default-dev (1.18) ... Setting up libhdf5-mpi-dev:amd64 (1.14.5+repack-3) ... Setting up libvtk9-dev:amd64 (9.3.0+dfsg1-1.1+b3) ... Setting up libvtk9-qt-dev:amd64 (9.3.0+dfsg1-1.1+b3) ... Setting up libinsighttoolkit5-dev (5.3.0-7+b3) ... Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for ca-certificates-java (20240118) ... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../plastimatch_1.9.4+dfsg.1-3_source.changes dpkg-buildpackage: info: source package plastimatch dpkg-buildpackage: info: source version 1.9.4+dfsg.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1' dh_auto_configure -- -DCMAKE_CXX_STANDARD=17 -DCMAKE_BUILD_TYPE:STRING=RELEASE -DCMAKE_SKIP_RPATH:BOOL=ON -DPLM_CONFIG_DEBIAN_BUILD:BOOL=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING:BOOL=ON cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_CXX_STANDARD=17 -DCMAKE_BUILD_TYPE:STRING=RELEASE -DCMAKE_SKIP_RPATH:BOOL=ON -DPLM_CONFIG_DEBIAN_BUILD:BOOL=ON -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING:BOOL=ON .. CMake Warning (dev) at CMakeLists.txt:6 (project): cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:17 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- Trying to find DCMTK expecting DCMTKConfig.cmake -- Trying to find DCMTK expecting DCMTKConfig.cmake - ok -- DCMTK version 3.6.8 found (1). -- Etags targets added. -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Could NOT find libLBFGS (missing: libLBFGS_LIBRARY libLBFGS_INCLUDE_DIR) -- Could NOT find nlopt (missing: nlopt_LIBRARY nlopt_INCLUDE_DIR) -- Looking for CL_VERSION_3_0 -- Looking for CL_VERSION_3_0 - not found -- Looking for CL_VERSION_2_2 -- Looking for CL_VERSION_2_2 - not found -- Looking for CL_VERSION_2_1 -- Looking for CL_VERSION_2_1 - not found -- Looking for CL_VERSION_2_0 -- Looking for CL_VERSION_2_0 - not found -- Looking for CL_VERSION_1_2 -- Looking for CL_VERSION_1_2 - not found -- Looking for CL_VERSION_1_1 -- Looking for CL_VERSION_1_1 - not found -- Looking for CL_VERSION_1_0 -- Looking for CL_VERSION_1_0 - not found -- Could NOT find OpenCL (missing: OpenCL_LIBRARY OpenCL_INCLUDE_DIR) -- Check for compiler OpenMP support... -- OpenMP flags "-fopenmp", OpenMP libraries "" CMake Warning (dev) at cmake/FindSSE.cmake:9 (EXEC_PROGRAM): Policy CMP0153 is not set: The exec_program command should not be called. Run "cmake --help-policy CMP0153" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Use execute_process() instead. Call Stack (most recent call first): CMakeLists.txt:350 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- SSE2_FLAGS "-msse2 -mfpmath=sse" -- Could NOT find wxWidgets (missing: wxWidgets_LIBRARIES wxWidgets_INCLUDE_DIRS) CMake Warning (dev) at cmake/FindCUDA_wrap.cmake:102 (find_package): Policy CMP0146 is not set: The FindCUDA module is removed. Run "cmake --help-policy CMP0146" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:433 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- CUDA Not found -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Looking for wxWidgets - not found. -- Looking for Matlab - not found. -- Looking for Octave - not found. -- Plastimatch version is 1.9.4 -- The imported target "gdcmdump" references the file "/usr/bin/gdcmdump" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdiff" references the file "/usr/bin/gdcmdiff" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmraw" references the file "/usr/bin/gdcmraw" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscanner" references the file "/usr/bin/gdcmscanner" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmanon" references the file "/usr/bin/gdcmanon" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmclean" references the file "/usr/bin/gdcmclean" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmgendir" references the file "/usr/bin/gdcmgendir" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmimg" references the file "/usr/bin/gdcmimg" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmconv" references the file "/usr/bin/gdcmconv" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmtar" references the file "/usr/bin/gdcmtar" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcminfo" references the file "/usr/bin/gdcminfo" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscu" references the file "/usr/bin/gdcmscu" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmxml" references the file "/usr/bin/gdcmxml" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpap3" references the file "/usr/bin/gdcmpap3" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpdf" references the file "/usr/bin/gdcmpdf" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-3.0/GDCMTargets.cmake" but not all the files it references. -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.a;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.a;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: CXX C HL -- Found Python3: /usr/bin/python3 (found suitable version "3.13.1", minimum required is "3.13") found components: Interpreter Development.Module Development.Embed -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found GLEW: /usr/lib/x86_64-linux-gnu/libGLEW.so -- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so found components: OpenGL GLX -- Found MPI_C: /usr/lib/x86_64-linux-gnu/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") found components: C -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.a;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.14.5") found components: C HL -- Found NetCDF: /usr/include (found version "4.9.2") -- Found OGG: /usr/lib/x86_64-linux-gnu/libogg.so -- Found THEORA: /usr/lib/x86_64-linux-gnu/libtheora.so -- Found LibPROJ: /usr/lib/x86_64-linux-gnu/libproj.so (found version "9.5.1") -- Found JsonCpp: /usr/lib/x86_64-linux-gnu/libjsoncpp.so (found suitable version "1.9.6", minimum required is "0.7.0") -- Found LibXml2: /usr/lib/x86_64-linux-gnu/libxml2.so (found version "2.9.14") -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so -- Found GL2PS: /usr/lib/x86_64-linux-gnu/libgl2ps.so (found suitable version "1.4.2", minimum required is "1.4.2") -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.3.1") -- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.6.45") -- Found SQLite3: /usr/include (found version "3.46.1") -- Found Eigen3: /usr/include/eigen3 (found version "3.4.0") -- Found X11: /usr/include -- Looking for XOpenDisplay in /usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so -- Looking for XOpenDisplay in /usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Looking for IceConnectionNumber in ICE -- Looking for IceConnectionNumber in ICE - found -- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found version "2.6.4") -- Found double-conversion: /usr/lib/x86_64-linux-gnu/libdouble-conversion.so -- Found LZ4: /usr/lib/x86_64-linux-gnu/liblz4.so (found version "1.9.4") -- Found LZMA: /usr/lib/x86_64-linux-gnu/liblzma.so (found version "5.6.3") -- Found JPEG: /usr/lib/x86_64-linux-gnu/libjpeg.so (found version "62") -- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.5.1") -- Could NOT find freetype (missing: freetype_DIR) -- Found Freetype: /usr/lib/x86_64-linux-gnu/libfreetype.so (found version "2.13.3") -- Found utf8cpp: /usr/include/utf8cpp -- ITK_VERSION = 5.3.0 found -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h - not found -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h -- Looking for C++ include itkVectorCentralDifferenceImageFunction.h - not found -- ITK_BASE = /usr/lib/x86_64-linux-gnu/cmake/ITK-5.3 -- Looking for Qt4 - not found -- Looking for Qt5 - found -- Could NOT find yaml (missing: yaml_LIBRARIES yaml_INCLUDE_DIR) CMake Deprecation Warning at src/plastimatch/CMakeLists.txt:7 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- Machine is 64-bit -- Checking host processor: x86_64 -- Checking target processor: x86_64 -- Checking epsilon: 2.22045E-16 2.22045E-16 2.22045E-16 -- Checking sign of char: char is signed -- Trying to find DCMTK expecting DCMTKConfig.cmake -- Trying to find DCMTK expecting DCMTKConfig.cmake - ok -- Appending /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -- Not appending /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.2 -- Configuring done (10.9s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1' dh_auto_build cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/plastimatch-1.9.4+dfsg.1 -B/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/depend make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/depend make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/depend make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/depend make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/DependInfo.cmake "--color=" make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard/CMakeFiles/devillard.dir/DependInfo.cmake "--color=" make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29/CMakeFiles/inih.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/specfun /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun/CMakeFiles/specfun.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress/CMakeFiles/nkidecompress.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp/CMakeFiles/plmclp.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys/CMakeFiles/plmsys.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f libs/nkidecompress/CMakeFiles/nkidecompress.dir/build.make libs/nkidecompress/CMakeFiles/nkidecompress.dir/build make -f libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build.make libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/build make -f libs/devillard/CMakeFiles/devillard.dir/build.make libs/devillard/CMakeFiles/devillard.dir/build make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f libs/inih-r29/CMakeFiles/inih.dir/build.make libs/inih-r29/CMakeFiles/inih.dir/build make -f libs/specfun/CMakeFiles/specfun.dir/build.make libs/specfun/CMakeFiles/specfun.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/sys/CMakeFiles/plmsys.dir/build.make src/plastimatch/sys/CMakeFiles/plmsys.dir/build make -f src/plastimatch/clp/CMakeFiles/plmclp.dir/build.make src/plastimatch/clp/CMakeFiles/plmclp.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 0%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o [ 0%] Building CXX object libs/devillard/CMakeFiles/devillard.dir/wirth.cpp.o [ 0%] Building C object libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o [ 0%] Building CXX object libs/inih-r29/CMakeFiles/inih.dir/INIReader.cpp.o [ 0%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/dir_list.cxx.o [ 0%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/logfile.cxx.o [ 1%] Building C object libs/inih-r29/CMakeFiles/inih.dir/ini.c.o [ 1%] Building C object libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/dlib_threads.cxx.o -MF CMakeFiles/plmsys.dir/dlib_threads.cxx.o.d -o CMakeFiles/plmsys.dir/dlib_threads.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/dlib_threads.cxx [ 1%] Building CXX object libs/nkidecompress/CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o [ 1%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/path_util.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-cpp -MD -MT libs/devillard/CMakeFiles/devillard.dir/wirth.cpp.o -MF CMakeFiles/devillard.dir/wirth.cpp.o.d -o CMakeFiles/devillard.dir/wirth.cpp.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard/wirth.cpp [ 1%] Building CXX object src/plastimatch/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/specfun/CMakeFiles/specfun.dir/mpbdv.c.o -MF CMakeFiles/specfun.dir/mpbdv.c.o.d -o CMakeFiles/specfun.dir/mpbdv.c.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/specfun/mpbdv.c cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-cpp -MD -MT libs/inih-r29/CMakeFiles/inih.dir/INIReader.cpp.o -MF CMakeFiles/inih.dir/INIReader.cpp.o.d -o CMakeFiles/inih.dir/INIReader.cpp.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29/INIReader.cpp cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/logfile.cxx.o -MF CMakeFiles/plmsys.dir/logfile.cxx.o.d -o CMakeFiles/plmsys.dir/logfile.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/logfile.cxx [ 1%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/option_range.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/dir_list.cxx.o -MF CMakeFiles/plmsys.dir/dir_list.cxx.o.d -o CMakeFiles/plmsys.dir/dir_list.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/dir_list.cxx [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_endian.cxx.o [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_fwrite.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/inih-r29/CMakeFiles/inih.dir/ini.c.o -MF CMakeFiles/inih.dir/ini.c.o.d -o CMakeFiles/inih.dir/ini.c.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29/ini.c cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cc -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT libs/liblbfgs-1.9/CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -MF CMakeFiles/lbfgs.dir/lib/lbfgs.c.o.d -o CMakeFiles/lbfgs.dir/lib/lbfgs.c.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/lib/lbfgs.c cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=gnu++17 -fPIC -Wno-cpp -MD -MT libs/nkidecompress/CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -MF CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o.d -o CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress/nkidecompress.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/path_util.cxx.o -MF CMakeFiles/plmsys.dir/path_util.cxx.o.d -o CMakeFiles/plmsys.dir/path_util.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/path_util.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -MD -MT src/plastimatch/clp/CMakeFiles/plmclp.dir/plm_clp.cxx.o -MF CMakeFiles/plmclp.dir/plm_clp.cxx.o.d -o CMakeFiles/plmclp.dir/plm_clp.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp/plm_clp.cxx [ 2%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/option_range.cxx.o -MF CMakeFiles/plmsys.dir/option_range.cxx.o.d -o CMakeFiles/plmsys.dir/option_range.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/option_range.cxx [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/file_util.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_endian.cxx.o -MF CMakeFiles/plmsys.dir/plm_endian.cxx.o.d -o CMakeFiles/plmsys.dir/plm_endian.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/plm_endian.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_fwrite.cxx.o -MF CMakeFiles/plmsys.dir/plm_fwrite.cxx.o.d -o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/plm_fwrite.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_sleep.cxx.o -MF CMakeFiles/plmsys.dir/plm_sleep.cxx.o.d -o CMakeFiles/plmsys.dir/plm_sleep.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/plm_sleep.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/file_util.cxx.o -MF CMakeFiles/plmsys.dir/file_util.cxx.o.d -o CMakeFiles/plmsys.dir/file_util.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/file_util.cxx [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/plm_timer.cxx.o -MF CMakeFiles/plmsys.dir/plm_timer.cxx.o.d -o CMakeFiles/plmsys.dir/plm_timer.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/plm_timer.cxx [ 3%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/string_util.cxx.o [ 3%] Building C object src/plastimatch/sys/CMakeFiles/plmsys.dir/delayload_legacy.c.o [ 4%] Building CXX object src/plastimatch/sys/CMakeFiles/plmsys.dir/print_and_exit.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/string_util.cxx.o -MF CMakeFiles/plmsys.dir/string_util.cxx.o.d -o CMakeFiles/plmsys.dir/string_util.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/string_util.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/cc -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -fPIC -Wno-cpp -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/delayload_legacy.c.o -MF CMakeFiles/plmsys.dir/delayload_legacy.c.o.d -o CMakeFiles/plmsys.dir/delayload_legacy.c.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/delayload_legacy.c cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dplmsys_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/usr/include/hdf5/serial -I/usr/include/gdcm-3.0 -I/usr/include/ITK-5.3 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/sys/CMakeFiles/plmsys.dir/print_and_exit.cxx.o -MF CMakeFiles/plmsys.dir/print_and_exit.cxx.o.d -o CMakeFiles/plmsys.dir/print_and_exit.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys/print_and_exit.cxx [ 4%] Linking CXX static library ../../libdevillard.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -P CMakeFiles/devillard.dir/cmake_clean_target.cmake cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/devillard && /usr/bin/cmake -E cmake_link_script CMakeFiles/devillard.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libdevillard.a CMakeFiles/devillard.dir/wirth.cpp.o /usr/bin/ranlib ../../libdevillard.a make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target devillard [ 4%] Linking C static library ../../libspecfun.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -P CMakeFiles/specfun.dir/cmake_clean_target.cmake cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun && /usr/bin/cmake -E cmake_link_script CMakeFiles/specfun.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libspecfun.a CMakeFiles/specfun.dir/mpbdv.c.o /usr/bin/ranlib ../../libspecfun.a make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target specfun [ 4%] Linking CXX static library ../../libnkidecompress.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake -P CMakeFiles/nkidecompress.dir/cmake_clean_target.cmake cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/nkidecompress && /usr/bin/cmake -E cmake_link_script CMakeFiles/nkidecompress.dir/link.txt --verbose=1 /usr/bin/ar qc ../../libnkidecompress.a CMakeFiles/nkidecompress.dir/nkidecompress.cxx.o /usr/bin/ranlib ../../libnkidecompress.a make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target nkidecompress [ 4%] Linking C static library ../../liblbfgs.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -P CMakeFiles/lbfgs.dir/cmake_clean_target.cmake cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 && /usr/bin/cmake -E cmake_link_script CMakeFiles/lbfgs.dir/link.txt --verbose=1 [ 4%] Linking CXX static library ../../libinih.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cmake -P CMakeFiles/inih.dir/cmake_clean_target.cmake cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/inih-r29 && /usr/bin/cmake -E cmake_link_script CMakeFiles/inih.dir/link.txt --verbose=1 /usr/bin/ar qc ../../liblbfgs.a CMakeFiles/lbfgs.dir/lib/lbfgs.c.o /usr/bin/ranlib ../../liblbfgs.a make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target lbfgs /usr/bin/ar qc ../../libinih.a CMakeFiles/inih.dir/ini.c.o CMakeFiles/inih.dir/INIReader.cpp.o /usr/bin/ranlib ../../libinih.a make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target inih [ 4%] Linking CXX shared library ../../../libplmsys.so cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsys.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,--dependency-file=CMakeFiles/plmsys.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmsys.so.1.9 -o ../../../libplmsys.so.1.9 CMakeFiles/plmsys.dir/dir_list.cxx.o CMakeFiles/plmsys.dir/dlib_threads.cxx.o CMakeFiles/plmsys.dir/file_util.cxx.o CMakeFiles/plmsys.dir/logfile.cxx.o CMakeFiles/plmsys.dir/option_range.cxx.o CMakeFiles/plmsys.dir/path_util.cxx.o CMakeFiles/plmsys.dir/plm_endian.cxx.o CMakeFiles/plmsys.dir/plm_fwrite.cxx.o CMakeFiles/plmsys.dir/plm_sleep.cxx.o CMakeFiles/plmsys.dir/plm_timer.cxx.o CMakeFiles/plmsys.dir/print_and_exit.cxx.o CMakeFiles/plmsys.dir/string_util.cxx.o CMakeFiles/plmsys.dir/delayload_legacy.c.o -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -ldl -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lblas -llapack -lsqlite3 cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/sys && /usr/bin/cmake -E cmake_symlink_library ../../../libplmsys.so.1.9 ../../../libplmsys.so.1.9 ../../../libplmsys.so make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Built target plmsys make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base/CMakeFiles/plmbase.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/base/CMakeFiles/plmbase.dir/build.make src/plastimatch/base/CMakeFiles/plmbase.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 4%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/aperture.cxx.o [ 4%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o [ 4%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/beam_geometry.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_io.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o [ 6%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/aperture.cxx.o -MF CMakeFiles/plmbase.dir/aperture.cxx.o.d -o CMakeFiles/plmbase.dir/aperture.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/aperture.cxx [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o [ 7%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/beam_geometry.cxx.o -MF CMakeFiles/plmbase.dir/beam_geometry.cxx.o.d -o CMakeFiles/plmbase.dir/beam_geometry.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/beam_geometry.cxx [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/astroid_dose.cxx.o -MF CMakeFiles/plmbase.dir/astroid_dose.cxx.o.d -o CMakeFiles/plmbase.dir/astroid_dose.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/astroid_dose.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_header.cxx.o -MF CMakeFiles/plmbase.dir/bspline_header.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_header.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/bspline_header.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -MF CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_interpolate.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/bspline_interpolate.cxx [ 8%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/float_pair_list.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_warp.cxx.o -MF CMakeFiles/plmbase.dir/bspline_warp.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_warp.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/bspline_warp.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/gaussian.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform.cxx.o -MF CMakeFiles/plmbase.dir/bspline_xform.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_xform.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/bspline_xform.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/image_stats.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -MF CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o.d -o CMakeFiles/plmbase.dir/bspline_xform_legacy.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/bspline_xform_legacy.cxx [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/hnd_io.cxx.o [ 9%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/interpolate.cxx.o [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_bbox.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_extract.cxx.o -MF CMakeFiles/plmbase.dir/cxt_extract.cxx.o.d -o CMakeFiles/plmbase.dir/cxt_extract.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/cxt_extract.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/cxt_io.cxx.o -MF CMakeFiles/plmbase.dir/cxt_io.cxx.o.d -o CMakeFiles/plmbase.dir/cxt_io.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/cxt_io.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image.cxx.o [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_directions.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_probe.cxx.o -MF CMakeFiles/plmbase.dir/dicom_probe.cxx.o.d -o CMakeFiles/plmbase.dir/dicom_probe.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dicom_probe.cxx [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_clone.cxx.o [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_cast.cxx.o [ 10%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_create.cxx.o [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o [ 11%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o [ 12%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o [ 13%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dicom_util.cxx.o -MF CMakeFiles/plmbase.dir/dicom_util.cxx.o.d -o CMakeFiles/plmbase.dir/dicom_util.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dicom_util.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/direction_cosines.cxx.o -MF CMakeFiles/plmbase.dir/direction_cosines.cxx.o.d -o CMakeFiles/plmbase.dir/direction_cosines.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/direction_cosines.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/direction_matrices.cxx.o -MF CMakeFiles/plmbase.dir/direction_matrices.cxx.o.d -o CMakeFiles/plmbase.dir/direction_matrices.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/direction_matrices.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/exchkeys.cxx.o -MF CMakeFiles/plmbase.dir/exchkeys.cxx.o.d -o CMakeFiles/plmbase.dir/exchkeys.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/exchkeys.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/float_pair_list.cxx.o -MF CMakeFiles/plmbase.dir/float_pair_list.cxx.o.d -o CMakeFiles/plmbase.dir/float_pair_list.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/float_pair_list.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/gaussian.cxx.o -MF CMakeFiles/plmbase.dir/gaussian.cxx.o.d -o CMakeFiles/plmbase.dir/gaussian.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/gaussian.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/hnd_io.cxx.o -MF CMakeFiles/plmbase.dir/hnd_io.cxx.o.d -o CMakeFiles/plmbase.dir/hnd_io.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/hnd_io.cxx [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/image_stats.cxx.o -MF CMakeFiles/plmbase.dir/image_stats.cxx.o.d -o CMakeFiles/plmbase.dir/image_stats.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/image_stats.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/interpolate.cxx.o -MF CMakeFiles/plmbase.dir/interpolate.cxx.o.d -o CMakeFiles/plmbase.dir/interpolate.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/interpolate.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_bbox.cxx.o -MF CMakeFiles/plmbase.dir/itk_bbox.cxx.o.d -o CMakeFiles/plmbase.dir/itk_bbox.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_bbox.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_directions.cxx.o -MF CMakeFiles/plmbase.dir/itk_directions.cxx.o.d -o CMakeFiles/plmbase.dir/itk_directions.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_directions.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image.cxx.o -MF CMakeFiles/plmbase.dir/itk_image.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_accumulate.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_accumulate.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_cast.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_cast.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_cast.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_cast.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_clone.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_clone.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_clone.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_clone.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_create.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_create.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_create.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_create.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_header_compare.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_header_compare.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_char.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_double.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_float.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_int32.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_int64.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_int64.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_short.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uchar.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uint32.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_uint64.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_uint64.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_ushort.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_load_vec.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_vec.cxx [ 14%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_region.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_region.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_region.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_region.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_origin.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_origin.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_origin.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_save.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_save.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_save.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_save.cxx [ 15%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_shift_scale.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_shift_scale.cxx [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_stats.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_image_stats.cxx.o -MF CMakeFiles/plmbase.dir/itk_image_stats.cxx.o.d -o CMakeFiles/plmbase.dir/itk_image_stats.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_stats.cxx [ 16%] Linking CXX static library libplmclp.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -P CMakeFiles/plmclp.dir/cmake_clean_target.cmake [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_metadata.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_metadata.cxx.o -MF CMakeFiles/plmbase.dir/itk_metadata.cxx.o.d -o CMakeFiles/plmbase.dir/itk_metadata.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_metadata.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/clp && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmclp.dir/link.txt --verbose=1 [ 16%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_pointset.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_pointset.cxx.o -MF CMakeFiles/plmbase.dir/itk_pointset.cxx.o.d -o CMakeFiles/plmbase.dir/itk_pointset.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_pointset.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_resample.cxx.o /usr/bin/ar qc libplmclp.a CMakeFiles/plmclp.dir/plm_clp.cxx.o /usr/bin/ranlib libplmclp.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_resample.cxx.o -MF CMakeFiles/plmbase.dir/itk_resample.cxx.o.d -o CMakeFiles/plmbase.dir/itk_resample.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_resample.cxx make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 17%] Built target plmclp [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_volume_header.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_volume_header.cxx.o -MF CMakeFiles/plmbase.dir/itk_volume_header.cxx.o.d -o CMakeFiles/plmbase.dir/itk_volume_header.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_volume_header.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/itk_warp.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/itk_warp.cxx.o -MF CMakeFiles/plmbase.dir/itk_warp.cxx.o.d -o CMakeFiles/plmbase.dir/itk_warp.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_warp.cxx [ 17%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/mc_dose.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/mc_dose.cxx.o -MF CMakeFiles/plmbase.dir/mc_dose.cxx.o.d -o CMakeFiles/plmbase.dir/mc_dose.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/mc_dose.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/metadata.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/metadata.cxx.o -MF CMakeFiles/plmbase.dir/metadata.cxx.o.d -o CMakeFiles/plmbase.dir/metadata.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/metadata.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/mha_io.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/mha_io.cxx.o -MF CMakeFiles/plmbase.dir/mha_io.cxx.o.d -o CMakeFiles/plmbase.dir/mha_io.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/mha_io.cxx In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = int; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_int32.cxx:20:27: required from here 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = unsigned char; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_uchar.cxx:20:27: required from here 20 | img = itk_image_load_any (fname, original_type, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 21 | static_cast(0)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = double; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_double.cxx:20:27: required from here 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = char; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_char.cxx:21:27: required from here 21 | img = itk_image_load_any (fname, original_type, | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 22 | static_cast(0)); | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = short unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_ushort.cxx:20:27: required from here 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_int64.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = long int; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_int64.cxx:20:27: required from here 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_uint64.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = long unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_uint64.cxx:20:27: required from here 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = unsigned int; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_uint32.cxx:20:27: required from here 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/nki_io.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/nki_io.cxx.o -MF CMakeFiles/plmbase.dir/nki_io.cxx.o.d -o CMakeFiles/plmbase.dir/nki_io.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/nki_io.cxx [ 18%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/parameter_parser.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/parameter_parser.cxx.o -MF CMakeFiles/plmbase.dir/parameter_parser.cxx.o.d -o CMakeFiles/plmbase.dir/parameter_parser.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/parameter_parser.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_file_format.cxx.o [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_file_format.cxx.o -MF CMakeFiles/plmbase.dir/plm_file_format.cxx.o.d -o CMakeFiles/plmbase.dir/plm_file_format.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/plm_file_format.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image.cxx.o -MF CMakeFiles/plmbase.dir/plm_image.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/plm_image.cxx [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_convert.cxx.o [ 19%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_header.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_header.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_header.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_header.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/plm_image_header.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_convert.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_convert.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_convert.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/plm_image_convert.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_set.cxx.o [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_type.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_type.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_type.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_type.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/plm_image_type.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_image_set.cxx.o -MF CMakeFiles/plmbase.dir/plm_image_set.cxx.o.d -o CMakeFiles/plmbase.dir/plm_image_set.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/plm_image_set.cxx In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = float; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_float.cxx:20:27: required from here 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx: In instantiation of 'typename itk::Image::Pointer itk_image_load_any(const char*, Plm_image_type*, U) [with U = short int; typename itk::Image::Pointer = itk::SmartPointer >]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load_short.cxx:20:27: required from here 20 | img = itk_image_load_any (fname, original_type, static_cast(0)); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_load.txx:140:65: warning: format '%d' expects argument of type 'int', but argument 3 has type 'itk::ImageIOBase::IOComponentType' {aka 'itk::CommonEnums::IOComponent'} [-Wformat=] 140 | "Error: unhandled file type for loading image (%d) %s\n", | ~^ | | | int 141 | componentType, fname); | ~~~~~~~~~~~~~ | | | itk::ImageIOBase::IOComponentType {aka itk::CommonEnums::IOComponent} [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/plm_warp.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/plm_warp.cxx.o -MF CMakeFiles/plmbase.dir/plm_warp.cxx.o.d -o CMakeFiles/plmbase.dir/plm_warp.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/plm_warp.cxx [ 20%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pointset.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/pointset.cxx.o -MF CMakeFiles/plmbase.dir/pointset.cxx.o.d -o CMakeFiles/plmbase.dir/pointset.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/pointset.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pointset_warp.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/pointset_warp.cxx.o -MF CMakeFiles/plmbase.dir/pointset_warp.cxx.o.d -o CMakeFiles/plmbase.dir/pointset_warp.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/pointset_warp.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image.cxx.o -MF CMakeFiles/plmbase.dir/proj_image.cxx.o.d -o CMakeFiles/plmbase.dir/proj_image.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_image.cxx [ 21%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image_dir.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/proj_image_dir.cxx.o -MF CMakeFiles/plmbase.dir/proj_image_dir.cxx.o.d -o CMakeFiles/plmbase.dir/proj_image_dir.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_image_dir.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_matrix.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/proj_matrix.cxx.o -MF CMakeFiles/plmbase.dir/proj_matrix.cxx.o.d -o CMakeFiles/plmbase.dir/proj_matrix.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_matrix.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/proj_volume.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/proj_volume.cxx.o -MF CMakeFiles/plmbase.dir/proj_volume.cxx.o.d -o CMakeFiles/plmbase.dir/proj_volume.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_volume.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/pwlut.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/pwlut.cxx.o -MF CMakeFiles/plmbase.dir/pwlut.cxx.o.d -o CMakeFiles/plmbase.dir/pwlut.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/pwlut.cxx [ 22%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterize_slice.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -MF CMakeFiles/plmbase.dir/rasterize_slice.cxx.o.d -o CMakeFiles/plmbase.dir/rasterize_slice.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rasterize_slice.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_image.cxx: In function 'void pfm_load(Proj_image*, const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_image.cxx:175:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 175 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_image.cxx:183:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 183 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_image.cxx:190:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 190 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rasterizer.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rasterizer.cxx.o -MF CMakeFiles/plmbase.dir/rasterizer.cxx.o.d -o CMakeFiles/plmbase.dir/rasterizer.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rasterizer.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_fcsv(const char*) [with T = Labeled_point]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/pointset.cxx:65:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 65 | fgets (s, 1024, fp); | ~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/pointset.cxx: In member function 'void Pointset::load_fcsv(const char*) [with T = Point]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/pointset.cxx:65:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/raw_pointset.cxx.o -MF CMakeFiles/plmbase.dir/raw_pointset.cxx.o.d -o CMakeFiles/plmbase.dir/raw_pointset.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/raw_pointset.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -MF CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o.d -o CMakeFiles/plmbase.dir/ray_trace_probe.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/ray_trace_probe.cxx [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -MF CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o.d -o CMakeFiles/plmbase.dir/ray_trace_uniform.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/ray_trace_uniform.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/raw_pointset.cxx: In function 'Raw_pointset* pointset_load_fcsv(const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/raw_pointset.cxx:81:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 81 | fgets (s, 1024, fp); | ~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/raw_pointset.cxx: In function 'Raw_pointset* pointset_load_txt(const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/raw_pointset.cxx:135:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 135 | fgets (s, 1024, fp); | ~~~~~~^~~~~~~~~~~~~ [ 23%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -MF CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o.d -o CMakeFiles/plmbase.dir/rtds_dcmtk.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rtds_dcmtk.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -MF CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o.d -o CMakeFiles/plmbase.dir/rpl_volume_lut.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rpl_volume_lut.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rpl_volume.cxx.o -MF CMakeFiles/plmbase.dir/rpl_volume.cxx.o.d -o CMakeFiles/plmbase.dir/rpl_volume.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rpl_volume.cxx [ 24%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study.cxx.o -MF CMakeFiles/plmbase.dir/rt_study.cxx.o.d -o CMakeFiles/plmbase.dir/rt_study.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rt_study.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -MF CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o.d -o CMakeFiles/plmbase.dir/rt_study_metadata.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rt_study_metadata.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtog_io.cxx.o -MF CMakeFiles/plmbase.dir/rtog_io.cxx.o.d -o CMakeFiles/plmbase.dir/rtog_io.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rtog_io.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtss.cxx.o -MF CMakeFiles/plmbase.dir/rtss.cxx.o.d -o CMakeFiles/plmbase.dir/rtss.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rtss.cxx [ 25%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_contour.cxx.o -MF CMakeFiles/plmbase.dir/rtss_contour.cxx.o.d -o CMakeFiles/plmbase.dir/rtss_contour.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rtss_contour.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan.cxx.o -MF CMakeFiles/plmbase.dir/rtplan.cxx.o.d -o CMakeFiles/plmbase.dir/rtplan.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rtplan.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_roi.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtss_roi.cxx.o -MF CMakeFiles/plmbase.dir/rtss_roi.cxx.o.d -o CMakeFiles/plmbase.dir/rtss_roi.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rtss_roi.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_beam.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_beam.cxx.o -MF CMakeFiles/plmbase.dir/rtplan_beam.cxx.o.d -o CMakeFiles/plmbase.dir/rtplan_beam.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rtplan_beam.cxx [ 26%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o -MF CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o.d -o CMakeFiles/plmbase.dir/rtplan_control_pt.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rtplan_control_pt.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/plm_file_format.cxx: In function 'Plm_file_format plm_file_format_deduce(const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/plm_file_format.cxx:97:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 97 | fgets (line, MAX_LINE, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/segmentation.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/segmentation.cxx.o -MF CMakeFiles/plmbase.dir/segmentation.cxx.o.d -o CMakeFiles/plmbase.dir/segmentation.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/segmentation.cxx [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/slice_list.cxx.o [ 27%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/slice_extract.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/slice_list.cxx.o -MF CMakeFiles/plmbase.dir/slice_list.cxx.o.d -o CMakeFiles/plmbase.dir/slice_list.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/slice_list.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/slice_extract.cxx.o -MF CMakeFiles/plmbase.dir/slice_extract.cxx.o.d -o CMakeFiles/plmbase.dir/slice_extract.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/slice_extract.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ss_img_extract.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ss_img_extract.cxx.o -MF CMakeFiles/plmbase.dir/ss_img_extract.cxx.o.d -o CMakeFiles/plmbase.dir/ss_img_extract.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/ss_img_extract.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_volume.cxx: In member function 'void Proj_volume::save_header(const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_volume.cxx:299:30: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] 299 | fprintf (fp, "num_steps=%d\n", d_ptr->num_steps); | ~^ ~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_volume.cxx:301:30: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] 301 | fprintf (fp, "image_dim=%d %d\n", | ~^ | | | int | %ld 302 | d_ptr->image_dim[0], d_ptr->image_dim[1]); | ~~~~~~~~~~~~~~~~~~~ | | | plm_long {aka long int} /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/proj_volume.cxx:301:33: warning: format '%d' expects argument of type 'int', but argument 4 has type 'plm_long' {aka 'long int'} [-Wformat=] 301 | fprintf (fp, "image_dim=%d %d\n", | ~^ | | | int | %ld 302 | d_ptr->image_dim[0], d_ptr->image_dim[1]); | ~~~~~~~~~~~~~~~~~~~ | | | plm_long {aka long int} [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ss_list_io.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ss_list_io.cxx.o -MF CMakeFiles/plmbase.dir/ss_list_io.cxx.o.d -o CMakeFiles/plmbase.dir/ss_list_io.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/ss_list_io.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/threading.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/threading.cxx.o -MF CMakeFiles/plmbase.dir/threading.cxx.o.d -o CMakeFiles/plmbase.dir/threading.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/threading.cxx [ 28%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/thumbnail.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/thumbnail.cxx.o -MF CMakeFiles/plmbase.dir/thumbnail.cxx.o.d -o CMakeFiles/plmbase.dir/thumbnail.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/thumbnail.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/vf.cxx.o -MF CMakeFiles/plmbase.dir/vf.cxx.o.d -o CMakeFiles/plmbase.dir/vf.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/vf.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_convolve.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/vf_convolve.cxx.o -MF CMakeFiles/plmbase.dir/vf_convolve.cxx.o.d -o CMakeFiles/plmbase.dir/vf_convolve.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/vf_convolve.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_jacobian.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/vf_jacobian.cxx.o -MF CMakeFiles/plmbase.dir/vf_jacobian.cxx.o.d -o CMakeFiles/plmbase.dir/vf_jacobian.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/vf_jacobian.cxx [ 29%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/vf_stats.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/vf_stats.cxx.o -MF CMakeFiles/plmbase.dir/vf_stats.cxx.o.d -o CMakeFiles/plmbase.dir/vf_stats.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/vf_stats.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume.cxx.o -MF CMakeFiles/plmbase.dir/volume.cxx.o.d -o CMakeFiles/plmbase.dir/volume.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o -MF CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o.d -o CMakeFiles/plmbase.dir/volume_boundary_behavior.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume_boundary_behavior.cxx [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_conv.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_conv.cxx.o -MF CMakeFiles/plmbase.dir/volume_conv.cxx.o.d -o CMakeFiles/plmbase.dir/volume_conv.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume_conv.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rpl_volume.cxx: In member function 'void Rpl_volume::apply_beam_modifiers()': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rpl_volume.cxx:1471:22: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long int' [-Wformat=] 1471 | printf ("ires = %d %d\n", ires[0], ires[1]); | ~^ ~~~~~~~ | | | | int long int | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/rpl_volume.cxx:1471:25: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] 1471 | printf ("ires = %d %d\n", ires[0], ires[1]); | ~^ ~~~~~~~ | | | | int long int | %ld [ 30%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_fill.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_fill.cxx.o -MF CMakeFiles/plmbase.dir/volume_fill.cxx.o.d -o CMakeFiles/plmbase.dir/volume_fill.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume_fill.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_gaussian.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_gaussian.cxx.o -MF CMakeFiles/plmbase.dir/volume_gaussian.cxx.o.d -o CMakeFiles/plmbase.dir/volume_gaussian.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume_gaussian.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_grad.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_grad.cxx.o -MF CMakeFiles/plmbase.dir/volume_grad.cxx.o.d -o CMakeFiles/plmbase.dir/volume_grad.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume_grad.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_header.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_header.cxx.o -MF CMakeFiles/plmbase.dir/volume_header.cxx.o.d -o CMakeFiles/plmbase.dir/volume_header.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume_header.cxx [ 31%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_limit.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_limit.cxx.o -MF CMakeFiles/plmbase.dir/volume_limit.cxx.o.d -o CMakeFiles/plmbase.dir/volume_limit.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume_limit.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_resample.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_resample.cxx.o -MF CMakeFiles/plmbase.dir/volume_resample.cxx.o.d -o CMakeFiles/plmbase.dir/volume_resample.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume_resample.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/volume_stats.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/volume_stats.cxx.o -MF CMakeFiles/plmbase.dir/volume_stats.cxx.o.d -o CMakeFiles/plmbase.dir/volume_stats.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/volume_stats.cxx [ 32%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xform.cxx.o -MF CMakeFiles/plmbase.dir/xform.cxx.o.d -o CMakeFiles/plmbase.dir/xform.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_convert.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xform_convert.cxx.o -MF CMakeFiles/plmbase.dir/xform_convert.cxx.o.d -o CMakeFiles/plmbase.dir/xform_convert.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_convert.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_legacy.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xform_legacy.cxx.o -MF CMakeFiles/plmbase.dir/xform_legacy.cxx.o.d -o CMakeFiles/plmbase.dir/xform_legacy.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xform_point.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xform_point.cxx.o -MF CMakeFiles/plmbase.dir/xform_point.cxx.o.d -o CMakeFiles/plmbase.dir/xform_point.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_point.cxx [ 33%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct.cxx.o -MF CMakeFiles/plmbase.dir/xio_ct.cxx.o.d -o CMakeFiles/plmbase.dir/xio_ct.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_ct.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_demographic.cxx.o -MF CMakeFiles/plmbase.dir/xio_demographic.cxx.o.d -o CMakeFiles/plmbase.dir/xio_demographic.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_demographic.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o -MF CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o.d -o CMakeFiles/plmbase.dir/xio_ct_transform.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_ct_transform.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dir.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dir.cxx.o -MF CMakeFiles/plmbase.dir/xio_dir.cxx.o.d -o CMakeFiles/plmbase.dir/xio_dir.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dir.cxx [ 34%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dose.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_dose.cxx.o -MF CMakeFiles/plmbase.dir/xio_dose.cxx.o.d -o CMakeFiles/plmbase.dir/xio_dose.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_patient.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_patient.cxx.o -MF CMakeFiles/plmbase.dir/xio_patient.cxx.o.d -o CMakeFiles/plmbase.dir/xio_patient.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_patient.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_plan.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_plan.cxx.o -MF CMakeFiles/plmbase.dir/xio_plan.cxx.o.d -o CMakeFiles/plmbase.dir/xio_plan.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_plan.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_structures.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_structures.cxx.o -MF CMakeFiles/plmbase.dir/xio_structures.cxx.o.d -o CMakeFiles/plmbase.dir/xio_structures.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xio_studyset.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xio_studyset.cxx.o -MF CMakeFiles/plmbase.dir/xio_studyset.cxx.o.d -o CMakeFiles/plmbase.dir/xio_studyset.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_studyset.cxx [ 35%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_file.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_file.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_file.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_file.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_file.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/xpm.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/xpm.cxx.o -MF CMakeFiles/plmbase.dir/xpm.cxx.o.d -o CMakeFiles/plmbase.dir/xpm.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xpm.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_image.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_image.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_image.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_image.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_image.cxx [ 36%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_metadata.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_metadata.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_module.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_module.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_module.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_module.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_module.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rdd.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rdd.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtdose.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rtdose.cxx [ 37%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtss.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rtss.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rtplan.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rt_study.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study.cxx [ 38%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_rt_study_p.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rt_study_p.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_series.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_series.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_series.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_series.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_series.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_sro.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_sro.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function 'void xform_legacy_save_itk_bsp(itk::BSplineDeformableTransform::Pointer, const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:230:40: warning: format '%d' expects argument of type 'int', but argument 2 has type 'itk::TransformBaseTemplate::NumberOfParametersType' {aka 'long unsigned int'} [-Wformat=] 230 | printf (" # of parameters=%d\n", transform->GetBulkTransform()->GetNumberOfParameters()); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int itk::TransformBaseTemplate::NumberOfParametersType {aka long unsigned int} | %ld [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_uid.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_uid.cxx [ 39%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_util.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/dcmtk_util.cxx.o -MF CMakeFiles/plmbase.dir/dcmtk_util.cxx.o.d -o CMakeFiles/plmbase.dir/dcmtk_util.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_util.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx: In function 'void xio_dose_load_header(Xio_dose_header*, const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx:73:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 73 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx:82:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 82 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx:86:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 86 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx:90:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 90 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx:101:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 101 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx:106:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 106 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx:117:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 117 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx:120:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 120 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_dose.cxx:135:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 135 | fgets (line1, sizeof(line1), fp); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ [ 40%] Building CXX object src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmbase_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nkidecompress -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/base/CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o -MF CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o.d -o CMakeFiles/plmbase.dir/ray_trace_exact.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/ray_trace_exact.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx: In function 'void xform_legacy_load(Xform*, FILE*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:37:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 37 | fgets (buf,1024,fp); | ~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:99:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 99 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:100:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 100 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:103:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:141:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 141 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:150:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 150 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:156:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 156 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xform_legacy.cxx:168:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 168 | fgets(buf,1024,fp); | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx: In function 'void add_cms_structure(Rtss*, const Xio_studyset&, const char*, float)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx:111:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 111 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx:112:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 112 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx:113:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 113 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx:114:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 114 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx:115:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 115 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx:125:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 125 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx:132:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 132 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/xio_structures.cxx:175:19: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 175 | fgets (buf, 1024, fp); | ~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx: In member function 'void Dcmtk_rt_study::rt_ion_plan_load()': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx:101:30: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=] 101 | printf (">> Num beams = %d\n", num_beams); | ~^ ~~~~~~~~~ | | | | int long unsigned int | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx:142:35: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long unsigned int' [-Wformat=] 142 | printf (">> Adding beam (%d cp)\n", num_cp); | ~^ ~~~~~~ | | | | int long unsigned int | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/dcmtk_rtplan.cxx:208:37: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long int' [-Wformat=] 208 | printf (">> Adding cp (%d spots)\n", num_spots); | ~^ ~~~~~~~~~ | | | | int long int | %ld [ 40%] Linking CXX shared library ../../../libplmbase.so cd 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/usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libnkidecompress.a ../../../libplmsys.so.1.9 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect -lminc2 -lm -lz -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -lz -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/base && /usr/bin/cmake -E cmake_symlink_library ../../../libplmbase.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmbase.so make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 40%] Built target plmbase make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util/CMakeFiles/plmutil.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/util/CMakeFiles/plmutil.dir/build.make src/plastimatch/util/CMakeFiles/plmutil.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/bspline_correspond.cxx.o [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -MF CMakeFiles/plmutil.dir/bspline_correspond.cxx.o.d -o CMakeFiles/plmutil.dir/bspline_correspond.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/bspline_correspond.cxx [ 41%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o [ 42%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/diff.cxx.o [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/distance_map.cxx.o [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_center.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/dice_statistics.cxx.o -MF CMakeFiles/plmutil.dir/dice_statistics.cxx.o.d -o CMakeFiles/plmutil.dir/dice_statistics.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/dice_statistics.cxx [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/dvh.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -MF CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o.d -o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/dicom_sro_save.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/distance_map.cxx.o -MF CMakeFiles/plmutil.dir/distance_map.cxx.o.d -o CMakeFiles/plmutil.dir/distance_map.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/distance_map.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/diff.cxx.o -MF CMakeFiles/plmutil.dir/diff.cxx.o.d -o CMakeFiles/plmutil.dir/diff.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/diff.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/dvh.cxx.o -MF CMakeFiles/plmutil.dir/dvh.cxx.o.d -o CMakeFiles/plmutil.dir/dvh.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/dvh.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -MF CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o.d -o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/gamma_dose_comparison.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -MF CMakeFiles/plmutil.dir/geometry_chooser.cxx.o.d -o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/geometry_chooser.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/image_center.cxx.o -MF CMakeFiles/plmutil.dir/image_center.cxx.o.d -o CMakeFiles/plmutil.dir/image_center.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/image_center.cxx [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/image_boundary.cxx.o -MF CMakeFiles/plmutil.dir/image_boundary.cxx.o.d -o CMakeFiles/plmutil.dir/image_boundary.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/image_boundary.cxx [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_crop.cxx.o -MF CMakeFiles/plmutil.dir/itk_crop.cxx.o.d -o CMakeFiles/plmutil.dir/itk_crop.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_crop.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_gabor.cxx.o -MF CMakeFiles/plmutil.dir/itk_gabor.cxx.o.d -o CMakeFiles/plmutil.dir/itk_gabor.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_gabor.cxx [ 43%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -MF CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o.d -o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/hausdorff_distance.cxx [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_vf.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_vf.cxx.o -MF CMakeFiles/plmutil.dir/synthetic_vf.cxx.o.d -o CMakeFiles/plmutil.dir/synthetic_vf.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/synthetic_vf.cxx [ 45%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_scale.cxx.o [ 47%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/sift.cxx.o [ 48%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/proj_image_filter.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_scale.cxx.o -MF CMakeFiles/plmutil.dir/itk_scale.cxx.o.d -o CMakeFiles/plmutil.dir/itk_scale.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_scale.cxx [ 49%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_mha.cxx.o [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/simplify_points.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_series.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/rt_study_warp.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/xf_invert.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/plm_study.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_threshold.cxx.o [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/zcrop.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/ss_img_stats.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o -MF CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o.d -o CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_histogram_matching.cxx [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_intersect.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/threshbox.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_mask.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_union.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/volume_adjust.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/gabor.cxx.o [ 44%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/landmark_diff.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_adjust.cxx.o -MF CMakeFiles/plmutil.dir/itk_adjust.cxx.o.d -o CMakeFiles/plmutil.dir/itk_adjust.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_adjust.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_intersect.cxx.o -MF CMakeFiles/plmutil.dir/itk_intersect.cxx.o.d -o CMakeFiles/plmutil.dir/itk_intersect.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_intersect.cxx [ 51%] Building CXX object src/plastimatch/util/CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -MF CMakeFiles/plmutil.dir/itk_distance_map.cxx.o.d -o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_distance_map.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o -MF CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o.d -o CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_local_intensity_correction.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_threshold.cxx.o -MF CMakeFiles/plmutil.dir/itk_threshold.cxx.o.d -o CMakeFiles/plmutil.dir/itk_threshold.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_threshold.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_mask.cxx.o -MF CMakeFiles/plmutil.dir/itk_mask.cxx.o.d -o CMakeFiles/plmutil.dir/itk_mask.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_mask.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/itk_union.cxx.o -MF CMakeFiles/plmutil.dir/itk_union.cxx.o.d -o CMakeFiles/plmutil.dir/itk_union.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/itk_union.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/landmark_diff.cxx.o -MF CMakeFiles/plmutil.dir/landmark_diff.cxx.o.d -o CMakeFiles/plmutil.dir/landmark_diff.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/landmark_diff.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/proj_image_filter.cxx.o -MF CMakeFiles/plmutil.dir/proj_image_filter.cxx.o.d -o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/proj_image_filter.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/plm_series.cxx.o -MF CMakeFiles/plmutil.dir/plm_series.cxx.o.d -o CMakeFiles/plmutil.dir/plm_series.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/plm_series.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/plm_study.cxx.o -MF CMakeFiles/plmutil.dir/plm_study.cxx.o.d -o CMakeFiles/plmutil.dir/plm_study.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/plm_study.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/rt_study_warp.cxx.o -MF CMakeFiles/plmutil.dir/rt_study_warp.cxx.o.d -o CMakeFiles/plmutil.dir/rt_study_warp.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/rt_study_warp.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/sift.cxx.o -MF CMakeFiles/plmutil.dir/sift.cxx.o.d -o CMakeFiles/plmutil.dir/sift.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/sift.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/simplify_points.cxx.o -MF CMakeFiles/plmutil.dir/simplify_points.cxx.o.d -o CMakeFiles/plmutil.dir/simplify_points.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/simplify_points.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/ss_img_stats.cxx.o -MF CMakeFiles/plmutil.dir/ss_img_stats.cxx.o.d -o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/ss_img_stats.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/synthetic_mha.cxx.o -MF CMakeFiles/plmutil.dir/synthetic_mha.cxx.o.d -o CMakeFiles/plmutil.dir/synthetic_mha.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/synthetic_mha.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/threshbox.cxx.o -MF CMakeFiles/plmutil.dir/threshbox.cxx.o.d -o CMakeFiles/plmutil.dir/threshbox.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/threshbox.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/volume_adjust.cxx.o -MF CMakeFiles/plmutil.dir/volume_adjust.cxx.o.d -o CMakeFiles/plmutil.dir/volume_adjust.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/volume_adjust.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o -MF CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o.d -o CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/volume_boundary_type.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/xf_invert.cxx.o -MF CMakeFiles/plmutil.dir/xf_invert.cxx.o.d -o CMakeFiles/plmutil.dir/xf_invert.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/xf_invert.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/zcrop.cxx.o -MF CMakeFiles/plmutil.dir/zcrop.cxx.o.d -o CMakeFiles/plmutil.dir/zcrop.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/zcrop.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/gabor.cxx.o -MF CMakeFiles/plmutil.dir/gabor.cxx.o.d -o CMakeFiles/plmutil.dir/gabor.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/gabor.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmutil_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/util/CMakeFiles/plmutil.dir/ramp_filter.cxx.o -MF CMakeFiles/plmutil.dir/ramp_filter.cxx.o.d -o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/ramp_filter.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/threshbox.cxx: In function 'void do_overlap_fraction(Threshbox_parms*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/threshbox.cxx:257:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 257 | fscanf(fp1, "%s", tmpbuf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/threshbox.cxx:258:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 258 | fscanf(fp1, "%f %f %f", &phys_max1[0], &phys_max1[1], &phys_max1[2]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/threshbox.cxx:266:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 266 | fscanf(fp2, "%s", tmpbuf); | ~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/threshbox.cxx:267:15: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)' declared with attribute 'warn_unused_result' [-Wunused-result] 267 | fscanf(fp2, "%f %f %f", &phys_max2[0], &phys_max2[1], &phys_max2[2]); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 51%] Linking CXX shared library ../../../libplmutil.so cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmutil.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -fopenmp -Wl,--dependency-file=CMakeFiles/plmutil.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmutil.so.1.9 -o ../../../libplmutil.so.1.9 CMakeFiles/plmutil.dir/bspline_correspond.cxx.o CMakeFiles/plmutil.dir/dice_statistics.cxx.o CMakeFiles/plmutil.dir/dicom_sro_save.cxx.o CMakeFiles/plmutil.dir/distance_map.cxx.o CMakeFiles/plmutil.dir/diff.cxx.o CMakeFiles/plmutil.dir/dvh.cxx.o CMakeFiles/plmutil.dir/gamma_dose_comparison.cxx.o CMakeFiles/plmutil.dir/geometry_chooser.cxx.o CMakeFiles/plmutil.dir/hausdorff_distance.cxx.o CMakeFiles/plmutil.dir/image_boundary.cxx.o CMakeFiles/plmutil.dir/image_center.cxx.o CMakeFiles/plmutil.dir/itk_adjust.cxx.o CMakeFiles/plmutil.dir/itk_crop.cxx.o CMakeFiles/plmutil.dir/itk_distance_map.cxx.o CMakeFiles/plmutil.dir/itk_gabor.cxx.o CMakeFiles/plmutil.dir/itk_histogram_matching.cxx.o CMakeFiles/plmutil.dir/itk_intersect.cxx.o CMakeFiles/plmutil.dir/itk_local_intensity_correction.cxx.o CMakeFiles/plmutil.dir/itk_mask.cxx.o CMakeFiles/plmutil.dir/itk_scale.cxx.o CMakeFiles/plmutil.dir/itk_threshold.cxx.o CMakeFiles/plmutil.dir/itk_union.cxx.o CMakeFiles/plmutil.dir/landmark_diff.cxx.o CMakeFiles/plmutil.dir/proj_image_filter.cxx.o CMakeFiles/plmutil.dir/plm_series.cxx.o CMakeFiles/plmutil.dir/plm_study.cxx.o CMakeFiles/plmutil.dir/rt_study_warp.cxx.o CMakeFiles/plmutil.dir/sift.cxx.o CMakeFiles/plmutil.dir/simplify_points.cxx.o CMakeFiles/plmutil.dir/ss_img_stats.cxx.o CMakeFiles/plmutil.dir/synthetic_mha.cxx.o CMakeFiles/plmutil.dir/synthetic_vf.cxx.o CMakeFiles/plmutil.dir/threshbox.cxx.o CMakeFiles/plmutil.dir/volume_adjust.cxx.o CMakeFiles/plmutil.dir/volume_boundary_type.cxx.o CMakeFiles/plmutil.dir/xf_invert.cxx.o CMakeFiles/plmutil.dir/zcrop.cxx.o CMakeFiles/plmutil.dir/gabor.cxx.o CMakeFiles/plmutil.dir/ramp_filter.cxx.o -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include -lfftw3f -lfftw3 ../../../libdevillard.a ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect -lminc2 -lm -lz -lnetcdf -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect -lminc2 -lm -lz -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -lz -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl ../../../libnkidecompress.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/util && /usr/bin/cmake -E cmake_symlink_library ../../../libplmutil.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmutil.so make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 51%] Built target plmutil make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/depend make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/depend make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose/CMakeFiles/plmdose.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register/CMakeFiles/plmregister.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build.make src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/build make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/dose/CMakeFiles/plmdose.dir/build.make src/plastimatch/dose/CMakeFiles/plmdose.dir/build make -f src/plastimatch/register/CMakeFiles/plmregister.dir/build.make src/plastimatch/register/CMakeFiles/plmregister.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 51%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o [ 51%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o [ 52%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o [ 52%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o [ 52%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o [ 52%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline.cxx.o [ 52%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o [ 53%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/compute_dose.cxx.o [ 53%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o [ 53%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/particle_type.cxx.o [ 53%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o [ 54%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o [ 54%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/drr.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/bragg_curve.cxx.o -MF CMakeFiles/plmdose.dir/bragg_curve.cxx.o.d -o CMakeFiles/plmdose.dir/bragg_curve.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/bragg_curve.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline.cxx.o -MF CMakeFiles/plmregister.dir/bspline.cxx.o.d -o CMakeFiles/plmregister.dir/bspline.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -MF CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o.d -o CMakeFiles/plmreconstruct.dir/bowtie_correction.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/bowtie_correction.cxx [ 54%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_map.cxx.o -MF CMakeFiles/plmdose.dir/beam_map.cxx.o.d -o CMakeFiles/plmdose.dir/beam_map.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/beam_map.cxx [ 54%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr_options.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr_options.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/drr_options.cxx [ 54%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/compute_dose.cxx.o -MF CMakeFiles/plmdose.dir/compute_dose.cxx.o.d -o CMakeFiles/plmdose.dir/compute_dose.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/compute_dose.cxx [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -MF CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o.d -o CMakeFiles/plmreconstruct.dir/drr_trilin.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/drr_trilin.cxx [ 55%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -MF CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o.d -o CMakeFiles/plmdose.dir/dose_volume_functions.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/dose_volume_functions.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/particle_type.cxx.o -MF CMakeFiles/plmdose.dir/particle_type.cxx.o.d -o CMakeFiles/plmdose.dir/particle_type.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/particle_type.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_gm.cxx.o -MF CMakeFiles/plmregister.dir/bspline_gm.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_gm.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_gm.cxx [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o [ 56%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o [ 56%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mi.cxx.o -MF CMakeFiles/plmregister.dir/bspline_mi.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_mi.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_mi.cxx [ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_calc.cxx.o [ 57%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o [ 57%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o -MF CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o.d -o CMakeFiles/plmdose.dir/rt_depth_dose.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -MF CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_landmarks.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_dij.cxx.o -MF CMakeFiles/plmdose.dir/rt_dij.cxx.o.d -o CMakeFiles/plmdose.dir/rt_dij.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_dij.cxx [ 58%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o [ 59%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o [ 59%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_lut.cxx.o -MF CMakeFiles/plmdose.dir/rt_lut.cxx.o.d -o CMakeFiles/plmdose.dir/rt_lut.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_lut.cxx [ 59%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o [ 59%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/beam_calc.cxx.o -MF CMakeFiles/plmdose.dir/beam_calc.cxx.o.d -o CMakeFiles/plmdose.dir/beam_calc.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/beam_calc.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -msse2 -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_mse.cxx.o -MF CMakeFiles/plmregister.dir/bspline_mse.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_mse.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_mse.cxx [ 59%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -MF CMakeFiles/plmdose.dir/rt_spot_map.cxx.o.d -o CMakeFiles/plmdose.dir/rt_spot_map.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_spot_map.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_optimize.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_optimize_lbfgsb.cxx [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_optimize_liblbfgs.cxx [ 60%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_beam_model.cxx.o -MF CMakeFiles/plmdose.dir/rt_beam_model.cxx.o.d -o CMakeFiles/plmdose.dir/rt_beam_model.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_beam_model.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_optimize_nlopt.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_mebs.cxx.o -MF CMakeFiles/plmdose.dir/rt_mebs.cxx.o.d -o CMakeFiles/plmdose.dir/rt_mebs.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_parms.cxx.o -MF CMakeFiles/plmdose.dir/rt_parms.cxx.o.d -o CMakeFiles/plmdose.dir/rt_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_parms.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -MF CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o.d -o CMakeFiles/plmreconstruct.dir/fdk_util.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/fdk_util.cxx [ 60%] Building CXX object src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -MF CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_optimize_steepest.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/plan_calc.cxx.o -MF CMakeFiles/plmdose.dir/plan_calc.cxx.o.d -o CMakeFiles/plmdose.dir/plan_calc.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_parms.cxx.o -MF CMakeFiles/plmregister.dir/bspline_parms.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_parms.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_score.cxx.o -MF CMakeFiles/plmregister.dir/bspline_score.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_score.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_score.cxx [ 60%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons_cpu.cxx.o [ 60%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_stage.cxx.o -MF CMakeFiles/plmregister.dir/bspline_stage.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_stage.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_stage.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmreconstruct_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/plastimatch/reconstruct/CMakeFiles/plmreconstruct.dir/fdk.cxx.o -MF CMakeFiles/plmreconstruct.dir/fdk.cxx.o.d -o CMakeFiles/plmreconstruct.dir/fdk.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/fdk.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_state.cxx.o -MF CMakeFiles/plmregister.dir/bspline_state.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_state.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_state.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/rt_sigma.cxx.o -MF CMakeFiles/plmdose.dir/rt_sigma.cxx.o.d -o CMakeFiles/plmdose.dir/rt_sigma.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_sigma.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_regularize.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_regularize_analytic.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_regularize_numeric.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons.cxx.o [ 62%] Building CXX object src/plastimatch/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmdose_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/dose/CMakeFiles/plmdose.dir/wed_parms.cxx.o -MF CMakeFiles/plmdose.dir/wed_parms.cxx.o.d -o CMakeFiles/plmdose.dir/wed_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/wed_parms.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -MF CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o.d -o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/bspline_regularize_semi_analytic.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/demons.cxx.o -MF CMakeFiles/plmregister.dir/demons.cxx.o.d -o CMakeFiles/plmregister.dir/demons.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/demons.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/demons_cpu.cxx.o -MF CMakeFiles/plmregister.dir/demons_cpu.cxx.o.d -o CMakeFiles/plmregister.dir/demons_cpu.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/demons_cpu.cxx [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/demons_state.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/demons_state.cxx.o -MF CMakeFiles/plmregister.dir/demons_state.cxx.o.d -o CMakeFiles/plmregister.dir/demons_state.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/demons_state.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function 'bool Rt_depth_dose::load(const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:64:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 64 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx: In member function 'bool Rt_depth_dose::load_xio(const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:86:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 86 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:90:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 90 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:103:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 103 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:114:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 114 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_depth_dose.cxx:125:15: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 125 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/gpuit_demons.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/gpuit_demons.cxx.o -MF CMakeFiles/plmregister.dir/gpuit_demons.cxx.o.d -o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/gpuit_demons.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -MF CMakeFiles/plmregister.dir/groupwise_parms.cxx.o.d -o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/groupwise_parms.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/histogram.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/histogram.cxx.o -MF CMakeFiles/plmregister.dir/histogram.cxx.o.d -o CMakeFiles/plmregister.dir/histogram.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/histogram.cxx [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_align_center.cxx.o -MF CMakeFiles/plmregister.dir/itk_align_center.cxx.o.d -o CMakeFiles/plmregister.dir/itk_align_center.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_align_center.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o [ 63%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -MF CMakeFiles/plmregister.dir/itk_demons_util.cxx.o.d -o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_demons_util.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_demons.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_demons.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/wed_parms.cxx: In member function 'int Wed_parms::set_key_val(const char*, const char*, int)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/wed_parms.cxx:237:32: warning: format '%i' expects argument of type 'int*', but argument 3 has type 'plm_long*' {aka 'long int*'} [-Wformat=] 237 | if (sscanf (val, "%i %i", | ~^ | | | int* | %li 238 | &(this->ires[0]), | ~~~~~~~~~~~~~~~~ | | | plm_long* {aka long int*} /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/wed_parms.cxx:237:35: warning: format '%i' expects argument of type 'int*', but argument 4 has type 'plm_long*' {aka 'long int*'} [-Wformat=] 237 | if (sscanf (val, "%i %i", | ~^ | | | int* | %li 238 | &(this->ires[0]), 239 | &(this->ires[1])) != 2) | ~~~~~~~~~~~~~~~~ | | | plm_long* {aka long int*} [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx [ 64%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_log_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_log_demons.cxx [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -MF CMakeFiles/plmregister.dir/itk_optimizer.cxx.o.d -o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_optimizer.cxx [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -MF CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o.d -o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration.cxx.o -MF CMakeFiles/plmregister.dir/itk_registration.cxx.o.d -o CMakeFiles/plmregister.dir/itk_registration.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_registration.cxx [ 65%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_tps.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_tps.cxx.o -MF CMakeFiles/plmregister.dir/itk_tps.cxx.o.d -o CMakeFiles/plmregister.dir/itk_tps.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_tps.cxx [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o -MF CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o.d -o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_registration_observer.cxx [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/joint_histogram.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/joint_histogram.cxx.o -MF CMakeFiles/plmregister.dir/joint_histogram.cxx.o.d -o CMakeFiles/plmregister.dir/joint_histogram.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/joint_histogram.cxx [ 66%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/landmark_warp.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/landmark_warp.cxx.o -MF CMakeFiles/plmregister.dir/landmark_warp.cxx.o.d -o CMakeFiles/plmregister.dir/landmark_warp.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/landmark_warp.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/metric_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/metric_parms.cxx.o -MF CMakeFiles/plmregister.dir/metric_parms.cxx.o.d -o CMakeFiles/plmregister.dir/metric_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/metric_parms.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/metric_state.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/metric_state.cxx.o -MF CMakeFiles/plmregister.dir/metric_state.cxx.o.d -o CMakeFiles/plmregister.dir/metric_state.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/metric_state.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/process_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/process_parms.cxx.o -MF CMakeFiles/plmregister.dir/process_parms.cxx.o.d -o CMakeFiles/plmregister.dir/process_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/process_parms.cxx [ 67%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -MF CMakeFiles/plmregister.dir/rbf_cluster.cxx.o.d -o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/rbf_cluster.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -MF CMakeFiles/plmregister.dir/rbf_gauss.cxx.o.d -o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/rbf_gauss.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -MF CMakeFiles/plmregister.dir/rbf_wendland.cxx.o.d -o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/rbf_wendland.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration.cxx.o -MF CMakeFiles/plmregister.dir/registration.cxx.o.d -o CMakeFiles/plmregister.dir/registration.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration.cxx [ 68%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_data.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration_data.cxx.o -MF CMakeFiles/plmregister.dir/registration_data.cxx.o.d -o CMakeFiles/plmregister.dir/registration_data.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration_data.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration_parms.cxx.o -MF CMakeFiles/plmregister.dir/registration_parms.cxx.o.d -o CMakeFiles/plmregister.dir/registration_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration_parms.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_resample.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration_resample.cxx.o -MF CMakeFiles/plmregister.dir/registration_resample.cxx.o.d -o CMakeFiles/plmregister.dir/registration_resample.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration_resample.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/registration_util.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/registration_util.cxx.o -MF CMakeFiles/plmregister.dir/registration_util.cxx.o.d -o CMakeFiles/plmregister.dir/registration_util.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration_util.cxx [ 69%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/shared_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/shared_parms.cxx.o -MF CMakeFiles/plmregister.dir/shared_parms.cxx.o.d -o CMakeFiles/plmregister.dir/shared_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/shared_parms.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o -MF CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o.d -o CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/similarity_metric_type.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/stage_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/stage_parms.cxx.o -MF CMakeFiles/plmregister.dir/stage_parms.cxx.o.d -o CMakeFiles/plmregister.dir/stage_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/stage_parms.cxx [ 70%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_grid_search.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/translation_grid_search.cxx.o -MF CMakeFiles/plmregister.dir/translation_grid_search.cxx.o.d -o CMakeFiles/plmregister.dir/translation_grid_search.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/translation_grid_search.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mi.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mi.cxx.o -MF CMakeFiles/plmregister.dir/translation_mi.cxx.o.d -o CMakeFiles/plmregister.dir/translation_mi.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/translation_mi.cxx [ 71%] Building CXX object src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mse.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmregister_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/register/CMakeFiles/plmregister.dir/translation_mse.cxx.o -MF CMakeFiles/plmregister.dir/translation_mse.cxx.o.d -o CMakeFiles/plmregister.dir/translation_mse.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/translation_mse.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx: In member function 'void Rt_mebs::load_beamlet_map(Aperture::Pointer&)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1129:52: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] 1129 | printf("beamlet line number expected: %d, beamlet line detected: %d.\n", ap->get_dim(1), line_number); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1180:56: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] 1180 | printf("line %d: beamlet number expected: %d, beamlet number detected: %d.\n", line_number, ap->get_dim(0), beamlet_number); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1189:48: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] 1189 | printf("beamlet line number expected: %d, beamlet line detected: %d.\n", ap->get_dim(1), line_number); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx: In member function 'void Rt_mebs::compute_particle_number_matrix_from_target_active(Rpl_volume*, std::vector&, std::vector&)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1213:33: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] 1213 | printf("Aperture size: %d, min depth map size: %d, max depth map size: %d.\n", rpl_vol->get_aperture()->get_dim(0) * rpl_vol->get_aperture()->get_dim(1), (int) wepl_min.size(), (int) wepl_max.size()); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx: In member function 'void Rt_mebs::export_as_txt(const std::string&, Aperture::Pointer)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1385:18: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] 1385 | printf ("Ap %d %d\n", ap->get_dim(0), ap->get_dim(1)); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_mebs.cxx:1385:21: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] 1385 | printf ("Ap %d %d\n", ap->get_dim(0), ap->get_dim(1)); | ~^ ~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_dij.cxx: In member function 'void Rt_dij::dump(const std::string&) const': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/rt_dij.cxx:51:28: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long unsigned int' [-Wformat=] 51 | fprintf (fp, "%d %f\n", c->index, c->dose); | ~^ ~~~~~~~~ | | | | int long unsigned int | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/beam_calc.cxx: In member function 'bool Beam_calc::load(const char*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/beam_calc.cxx:194:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 194 | fgets (linebuf, 128, fp); | ~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx: In member function 'void Plan_calc::normalize_beam_dose(Beam_calc*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:424:48: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] 424 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:424:52: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] 424 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:438:48: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] 438 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:438:52: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] 438 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:452:44: warning: format '%d' expects argument of type 'int', but argument 2 has type 'plm_long' {aka 'long int'} [-Wformat=] 452 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:452:48: warning: format '%d' expects argument of type 'int', but argument 3 has type 'plm_long' {aka 'long int'} [-Wformat=] 452 | printf("Primary PB num. x, y: %d, %d, primary PB res. x, y: %lg PB/mm, %lg PB/mm\n", beam->get_aperture()->get_dim(0), beam->get_aperture()->get_dim(1), 1.0 / (double) beam->get_aperture()->get_spacing(0), 1.0 / (double) beam->get_aperture()->get_spacing(1)); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int plm_long {aka long int} | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx: In member function 'void Plan_calc::print_verif()': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:759:73: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long int' [-Wformat=] 759 | printf("\n i_res: "); for (int i = 0; i < num_beams; i++) {printf("%d %d ** ", d_ptr->beam_storage[i]->get_aperture()->get_dim()[0], d_ptr->beam_storage[i]->get_aperture()->get_dim()[1]);} | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int long int | %ld /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose/plan_calc.cxx:759:76: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] 759 | printf("\n i_res: "); for (int i = 0; i < num_beams; i++) {printf("%d %d ** ", d_ptr->beam_storage[i]->get_aperture()->get_dim()[0], d_ptr->beam_storage[i]->get_aperture()->get_dim()[1]);} | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | int long int | %ld [ 72%] Linking CXX shared library ../../../libplmreconstruct.so cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmreconstruct.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG 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/usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lofstd -loflog 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/usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtIn file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:22, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_diff_demons.h:7, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_diff_demons.cxx:5: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx: In instantiation of 'itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; PixelType = itk::Vector; NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; FloatOffsetType = itk::Vector]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here 228 | ESMDemonsRegistrationWithMaskFunction | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:279:51: warning: 'bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const std::string&) const [with unsigned int VDimension = 3; PointType = itk::Point; std::string = std::__cxx11::basic_string]' is deprecated [-Wdeprecated-declarations] 279 | if ( !this->GetMovingImageMask()->IsInside(mappedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/ITK-5.3/itkLightObject.h:21, from /usr/include/ITK-5.3/itkObject.h:31, from /usr/include/ITK-5.3/itkDataObject.h:31, from /usr/include/ITK-5.3/itkProcessObject.h:31, from /usr/include/ITK-5.3/itkImageSource.h:31, from /usr/include/ITK-5.3/itkImageToImageFilter.h:31, from /usr/include/ITK-5.3/itkInPlaceImageFilter.h:31, from /usr/include/ITK-5.3/itkFiniteDifferenceImageFilter.h:22, from /usr/include/ITK-5.3/itkDenseFiniteDifferenceImageFilter.h:22, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkPDEDeformableRegistrationWithMaskFilter.h:20, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons/itkDiffeomorphicDemonsRegistrationWithMaskFilter.h:21: /usr/include/ITK-5.3/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:288:50: warning: 'bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const std::string&) const [with unsigned int VDimension = 3; PointType = itk::Point; std::string = std::__cxx11::basic_string]' is deprecated [-Wdeprecated-declarations] 288 | if ( !this->GetFixedImageMask()->IsInside(fixedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/ITK-5.3/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ bb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 ../../../libnkidecompress.a -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lfftw3f -lfftw3 ../../../libdevillard.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/reconstruct && /usr/bin/cmake -E cmake_symlink_library ../../../libplmreconstruct.so.1.9 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/usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -lz -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces/itkFastSymmetricForcesDemonsRegistrationWithMaskFilter.h:22, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_fsf_demons.h:7, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:12: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx: In instantiation of 'itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; PixelType = itk::Vector; NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; FloatOffsetType = itk::Vector]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here 228 | ESMDemonsRegistrationWithMaskFunction | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:279:51: warning: 'bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const std::string&) const [with unsigned int VDimension = 3; PointType = itk::Point; std::string = std::__cxx11::basic_string]' is deprecated [-Wdeprecated-declarations] 279 | if ( !this->GetMovingImageMask()->IsInside(mappedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/ITK-5.3/itkArray.h:21, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_fsf_demons.cxx:8: /usr/include/ITK-5.3/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:288:50: warning: 'bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const std::string&) const [with unsigned int VDimension = 3; PointType = itk::Point; std::string = std::__cxx11::basic_string]' is deprecated [-Wdeprecated-declarations] 288 | if ( !this->GetFixedImageMask()->IsInside(fixedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/ITK-5.3/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:5, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_demons_types.h:14, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_sym_log_demons.h:8, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_sym_log_demons.cxx:6: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx: In instantiation of 'itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; PixelType = itk::Vector; NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; FloatOffsetType = itk::Vector]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here 228 | ESMDemonsRegistrationWithMaskFunction | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:279:51: warning: 'bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const std::string&) const [with unsigned int VDimension = 3; PointType = itk::Point; std::string = std::__cxx11::basic_string]' is deprecated [-Wdeprecated-declarations] 279 | if ( !this->GetMovingImageMask()->IsInside(mappedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/ITK-5.3/itkLightObject.h:21, from /usr/include/ITK-5.3/itkObject.h:31, from /usr/include/ITK-5.3/itkRegion.h:31, from /usr/include/ITK-5.3/itkImageRegion.h:31, from /usr/include/ITK-5.3/itkImage.h:21, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_demons_types.h:8: /usr/include/ITK-5.3/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:288:50: warning: 'bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const std::string&) const [with unsigned int VDimension = 3; PointType = itk::Point; std::string = std::__cxx11::basic_string]' is deprecated [-Wdeprecated-declarations] 288 | if ( !this->GetFixedImageMask()->IsInside(fixedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/ITK-5.3/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration.cxx: In function 'void* registration_main_thread(void*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration.cxx:597:51: warning: 'ThreadInfoStruct' is deprecated: Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0 [-Wdeprecated-declarations] 597 | itk::PlatformMultiThreader::ThreadInfoStruct *info | ^~~~ In file included from /usr/include/ITK-5.3/itkPlatformMultiThreader.h:31, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration.cxx:9: /usr/include/ITK-5.3/itkMultiThreaderBase.h:251:93: note: declared here 251 | struct [[deprecated("Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0")]] ThreadInfoStruct | ^~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration.cxx:598:56: warning: 'ThreadInfoStruct' is deprecated: Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0 [-Wdeprecated-declarations] 598 | = (itk::PlatformMultiThreader::ThreadInfoStruct*) param; | ^ /usr/include/ITK-5.3/itkMultiThreaderBase.h:251:93: note: declared here 251 | struct [[deprecated("Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0")]] ThreadInfoStruct | ^~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration.cxx: In member function 'void Registration::start_registration()': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration.cxx:623:53: warning: 'itk::ThreadIdType itk::PlatformMultiThreader::SpawnThread(itk::ThreadFunctionType, void*)' is deprecated [-Wdeprecated-declarations] 623 | d_ptr->thread_no = d_ptr->threader->SpawnThread ( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 624 | registration_main_thread, (void*) this); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/ITK-5.3/itkIntTypes.h:21, from /usr/include/ITK-5.3/itkSize.h:21, from /usr/include/ITK-5.3/itkOffset.h:21, from /usr/include/ITK-5.3/itkIndex.h:22, from /usr/include/ITK-5.3/itkImageConstIteratorWithIndex.h:21, from /usr/include/ITK-5.3/itkImageRegionConstIteratorWithIndex.h:21, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/registration.cxx:7: /usr/include/ITK-5.3/itkPlatformMultiThreader.h:133:3: note: declared here 133 | itkLegacyMacro(ThreadIdType SpawnThread(ThreadFunctionType, void * data)); | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.h:352, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons/itkLogDomainDemonsRegistrationFilterWithMaskExtension.h:5, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_demons_types.h:14, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_log_demons.h:8, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_log_demons.cxx:5: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx: In instantiation of 'itk::ESMDemonsRegistrationWithMaskFunction::PixelType itk::ESMDemonsRegistrationWithMaskFunction::ComputeUpdate(const NeighborhoodType&, void*, const FloatOffsetType&) [with TFixedImage = itk::Image; TMovingImage = itk::Image; TDeformationField = itk::Image, 3>; PixelType = itk::Vector; NeighborhoodType = itk::ConstNeighborhoodIterator, 3>, itk::ZeroFluxNeumannBoundaryCondition, 3>, itk::Image, 3> > >; FloatOffsetType = itk::Vector]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:228:1: required from here 228 | ESMDemonsRegistrationWithMaskFunction | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:279:51: warning: 'bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const std::string&) const [with unsigned int VDimension = 3; PointType = itk::Point; std::string = std::__cxx11::basic_string]' is deprecated [-Wdeprecated-declarations] 279 | if ( !this->GetMovingImageMask()->IsInside(mappedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ In file included from /usr/include/ITK-5.3/itkLightObject.h:21, from /usr/include/ITK-5.3/itkObject.h:31, from /usr/include/ITK-5.3/itkRegion.h:31, from /usr/include/ITK-5.3/itkImageRegion.h:31, from /usr/include/ITK-5.3/itkImage.h:21, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base/itk_image_type.h:14, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/itk_demons_types.h:8: /usr/include/ITK-5.3/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/itkESMDemonsRegistrationWithMaskFunction.txx:288:50: warning: 'bool itk::SpatialObject::IsInside(const PointType&, unsigned int, const std::string&) const [with unsigned int VDimension = 3; PointType = itk::Point; std::string = std::__cxx11::basic_string]' is deprecated [-Wdeprecated-declarations] 288 | if ( !this->GetFixedImageMask()->IsInside(fixedPoint) ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/ITK-5.3/itkSpatialObject.h:600:3: note: declared here 600 | itkLegacyMacro(virtual bool IsInside(const PointType & point, unsigned int depth = 0, const std::string & name = "") | ^~~~~~~~~~~~~~ libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 ../../../libnkidecompress.a ../../../libplmsys.so.1.9 -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lfftw3f -lfftw3 ../../../libdevillard.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/dose && /usr/bin/cmake -E cmake_symlink_library ../../../libplmdose.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmdose.so make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 72%] Built target plmdose [ 72%] Linking CXX shared library ../../../libplmregister.so cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmregister.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -fopenmp -Wl,--dependency-file=CMakeFiles/plmregister.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmregister.so.1.9 -o ../../../libplmregister.so.1.9 CMakeFiles/plmregister.dir/bspline.cxx.o CMakeFiles/plmregister.dir/bspline_landmarks.cxx.o CMakeFiles/plmregister.dir/bspline_gm.cxx.o CMakeFiles/plmregister.dir/bspline_mi.cxx.o CMakeFiles/plmregister.dir/bspline_mse.cxx.o CMakeFiles/plmregister.dir/bspline_optimize.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_lbfgsb.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_liblbfgs.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_nlopt.cxx.o CMakeFiles/plmregister.dir/bspline_optimize_steepest.cxx.o CMakeFiles/plmregister.dir/bspline_parms.cxx.o CMakeFiles/plmregister.dir/bspline_score.cxx.o CMakeFiles/plmregister.dir/bspline_stage.cxx.o CMakeFiles/plmregister.dir/bspline_state.cxx.o CMakeFiles/plmregister.dir/bspline_regularize.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_analytic.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_numeric.cxx.o CMakeFiles/plmregister.dir/bspline_regularize_semi_analytic.cxx.o CMakeFiles/plmregister.dir/demons.cxx.o CMakeFiles/plmregister.dir/demons_cpu.cxx.o CMakeFiles/plmregister.dir/demons_state.cxx.o CMakeFiles/plmregister.dir/gpuit_demons.cxx.o CMakeFiles/plmregister.dir/groupwise_parms.cxx.o CMakeFiles/plmregister.dir/histogram.cxx.o CMakeFiles/plmregister.dir/itk_align_center.cxx.o CMakeFiles/plmregister.dir/itk_demons.cxx.o CMakeFiles/plmregister.dir/itk_demons_util.cxx.o CMakeFiles/plmregister.dir/itk_diff_demons.cxx.o CMakeFiles/plmregister.dir/itk_fsf_demons.cxx.o CMakeFiles/plmregister.dir/itk_log_demons.cxx.o CMakeFiles/plmregister.dir/itk_sym_log_demons.cxx.o CMakeFiles/plmregister.dir/itk_optimizer.cxx.o CMakeFiles/plmregister.dir/itk_registration.cxx.o CMakeFiles/plmregister.dir/itk_registration_observer.cxx.o CMakeFiles/plmregister.dir/itk_tps.cxx.o CMakeFiles/plmregister.dir/joint_histogram.cxx.o CMakeFiles/plmregister.dir/landmark_warp.cxx.o CMakeFiles/plmregister.dir/metric_parms.cxx.o CMakeFiles/plmregister.dir/metric_state.cxx.o CMakeFiles/plmregister.dir/process_parms.cxx.o CMakeFiles/plmregister.dir/rbf_cluster.cxx.o CMakeFiles/plmregister.dir/rbf_gauss.cxx.o CMakeFiles/plmregister.dir/rbf_wendland.cxx.o CMakeFiles/plmregister.dir/registration.cxx.o CMakeFiles/plmregister.dir/registration_data.cxx.o CMakeFiles/plmregister.dir/registration_parms.cxx.o CMakeFiles/plmregister.dir/registration_resample.cxx.o CMakeFiles/plmregister.dir/registration_util.cxx.o CMakeFiles/plmregister.dir/shared_parms.cxx.o CMakeFiles/plmregister.dir/similarity_metric_type.cxx.o CMakeFiles/plmregister.dir/stage_parms.cxx.o CMakeFiles/plmregister.dir/translation_grid_search.cxx.o CMakeFiles/plmregister.dir/translation_mi.cxx.o CMakeFiles/plmregister.dir/translation_mse.cxx.o -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../../liblbfgs.a ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect -lminc2 -lm -lz -lnetcdf -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect -lminc2 -lm -lz -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -lz -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 ../../../libnkidecompress.a ../../../libplmsys.so.1.9 -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lfftw3f -lfftw3 ../../../libdevillard.a cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/register && /usr/bin/cmake -E cmake_symlink_library ../../../libplmregister.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmregister.so make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 72%] Built target plmregister make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment/CMakeFiles/plmsegment.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/segment/CMakeFiles/plmsegment.dir/build.make src/plastimatch/segment/CMakeFiles/plmsegment.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_task.cxx.o [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o [ 72%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel.cxx.o [ 73%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel.cxx [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o [ 74%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_task.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_task.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_task.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_stats.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_feature.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_thumbnailer.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_trainer.cxx [ 75%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o -MF CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o.d -o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/dlib_trainer.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs.cxx.o -MF CMakeFiles/plmsegment.dir/mabs.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/mabs.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/mabs_atlas_selection.cxx [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_vote.cxx.o [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_staple.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o -MF CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o.d -o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_parms.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_parms.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_parms.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_parms.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/mabs_parms.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/mabs_seg_weights.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_stats.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_stats.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/mabs_stats.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_staple.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_staple.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/mabs_staple.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -fopenmp -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/mabs_vote.cxx.o -MF CMakeFiles/plmsegment.dir/mabs_vote.cxx.o.d -o CMakeFiles/plmsegment.dir/mabs_vote.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/mabs_vote.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/segment_body.cxx.o -MF CMakeFiles/plmsegment.dir/segment_body.cxx.o.d -o CMakeFiles/plmsegment.dir/segment_body.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/segment_body.cxx [ 76%] Building CXX object src/plastimatch/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -Dplmsegment_EXPORTS -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIC -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/segment/CMakeFiles/plmsegment.dir/ml_convert.cxx.o -MF CMakeFiles/plmsegment.dir/ml_convert.cxx.o.d -o CMakeFiles/plmsegment.dir/ml_convert.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/ml_convert.cxx In file included from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/RANSAC.h:194, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:13: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/RANSAC.txx: In member function 'void itk::RANSAC::SetNumberOfThreads(unsigned int)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/RANSAC.txx:26:84: warning: 'static itk::ThreadIdType itk::PlatformMultiThreader::GetGlobalDefaultNumberOfThreads()' is deprecated [-Wdeprecated-declarations] 26 | numberOfThreads>itk::PlatformMultiThreader::GetGlobalDefaultNumberOfThreads() ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /usr/include/ITK-5.3/itkLightObject.h:21, from /usr/include/ITK-5.3/itkObject.h:31, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/ParametersEstimator.h:5, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.h:8, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:12: /usr/include/ITK-5.3/itkPlatformMultiThreader.h:96:3: note: declared here 96 | itkLegacyMacro(static ThreadIdType GetGlobalDefaultNumberOfThreads()) | ^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/RANSAC.txx: In static member function 'static void* itk::RANSAC::RANSACThreadCallback(void*)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/RANSAC.txx:160:58: warning: 'ThreadInfoStruct' is deprecated: Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0 [-Wdeprecated-declarations] 160 | typedef itk::PlatformMultiThreader::ThreadInfoStruct ThreadInfoType; | ^~~~~~~~~~~~~~ In file included from /usr/include/ITK-5.3/itkPlatformMultiThreader.h:31, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/RANSAC.h:13: /usr/include/ITK-5.3/itkMultiThreaderBase.h:251:93: note: declared here 251 | struct [[deprecated("Use WorkUnitInfo, ThreadInfoStruct is deprecated since ITK 5.0")]] ThreadInfoStruct | ^~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/RANSAC.txx: In instantiation of 'double itk::RANSAC::Compute(std::vector&, double) [with T = itk::Point; S = double]': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment/autolabel_ransac_est.cxx:248:54: required from here 248 | percentageOfDataUsed = ransac_estimator->Compute ( | ~~~~~~~~~~~~~~~~~~~~~~~~~~^ 249 | autolabel_parameters, desiredProbabilityForNoOutliers); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/RANSAC.txx:114:33: warning: 'virtual void itk::MultiThreaderBase::SetNumberOfThreads(itk::ThreadIdType)' is deprecated [-Wdeprecated-declarations] 114 | threader->SetNumberOfThreads( this->numberOfThreads ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-5.3/itkMultiThreaderBase.h:225:3: note: declared here 225 | itkLegacyMacro(virtual void SetNumberOfThreads(ThreadIdType numberOfThreads)) | ^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/RANSAC.txx:114:33: warning: 'virtual void itk::MultiThreaderBase::SetNumberOfThreads(itk::ThreadIdType)' is deprecated [-Wdeprecated-declarations] 114 | threader->SetNumberOfThreads( this->numberOfThreads ); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ITK-5.3/itkMultiThreaderBase.h:225:3: note: declared here 225 | itkLegacyMacro(virtual void SetNumberOfThreads(ThreadIdType numberOfThreads)) | ^~~~~~~~~~~~~~ [ 77%] Linking CXX shared library ../../../libplmsegment.so cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/cmake -E cmake_link_script CMakeFiles/plmsegment.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -fopenmp -Wl,--dependency-file=CMakeFiles/plmsegment.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libplmsegment.so.1.9 -o ../../../libplmsegment.so.1.9 CMakeFiles/plmsegment.dir/autolabel.cxx.o CMakeFiles/plmsegment.dir/autolabel_feature.cxx.o CMakeFiles/plmsegment.dir/autolabel_parms.cxx.o CMakeFiles/plmsegment.dir/autolabel_ransac_est.cxx.o CMakeFiles/plmsegment.dir/autolabel_task.cxx.o CMakeFiles/plmsegment.dir/autolabel_thumbnailer.cxx.o CMakeFiles/plmsegment.dir/autolabel_trainer.cxx.o CMakeFiles/plmsegment.dir/dlib_trainer.cxx.o CMakeFiles/plmsegment.dir/mabs.cxx.o CMakeFiles/plmsegment.dir/mabs_atlas_selection.cxx.o CMakeFiles/plmsegment.dir/mabs_parms.cxx.o CMakeFiles/plmsegment.dir/mabs_seg_weights.cxx.o CMakeFiles/plmsegment.dir/mabs_stats.cxx.o CMakeFiles/plmsegment.dir/mabs_staple.cxx.o CMakeFiles/plmsegment.dir/mabs_vote.cxx.o CMakeFiles/plmsegment.dir/ml_convert.cxx.o CMakeFiles/plmsegment.dir/segment_body.cxx.o -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../../../libplmregister.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 -lfftw3f -lfftw3 ../../../libdevillard.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -lz -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 ../../../libnkidecompress.a -ldl /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread ../../../liblbfgs.a -Wl,-Bdynamic cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/segment && /usr/bin/cmake -E cmake_symlink_library ../../../libplmsegment.so.1.9 ../../../libplmsegment.so.1.9 ../../../libplmsegment.so make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 77%] Built target plmsegment make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/depend make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/depend make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/depend make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/depend make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/depend make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/compute_distance.dir/DependInfo.cmake "--color=" make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_info.dir/DependInfo.cmake "--color=" make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/DependInfo.cmake "--color=" make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/depend make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli/CMakeFiles/plastimatch.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/DependInfo.cmake "--color=" make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/depend make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/wed.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/DependInfo.cmake "--color=" make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/check_grad.dir/DependInfo.cmake "--color=" make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/demons.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dlib_train.dir/DependInfo.cmake "--color=" make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/depend make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build.make src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/build make -f src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build.make src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/build make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build.make src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/build make -f src/plastimatch/standalone/CMakeFiles/demons.dir/build.make src/plastimatch/standalone/CMakeFiles/demons.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -MF CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o.d -o CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/bragg_curve_main.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -MF CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o.d -o CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/dicom_uid_main.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -MF CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o.d -o CMakeFiles/hnd_to_pfm.dir/hnd_to_pfm.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/hnd_to_pfm.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -MF CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o.d -o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/bragg_curve_opts.cxx [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_main.cxx.o [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/demons.dir/demons_main.cxx.o -MF CMakeFiles/demons.dir/demons_main.cxx.o.d -o CMakeFiles/demons.dir/demons_main.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/demons_main.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -MF CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o.d -o CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/xvi_archive.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/demons.dir/demons_opts.cxx.o -MF CMakeFiles/demons.dir/demons_opts.cxx.o.d -o CMakeFiles/demons.dir/demons_opts.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/demons_opts.cxx make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/plastimatch-1.9.4+dfsg.1 /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone/CMakeFiles/sobp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/wed.dir/build.make src/plastimatch/standalone/CMakeFiles/wed.dir/build make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build.make src/plastimatch/standalone/CMakeFiles/dicom_info.dir/build make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build.make src/plastimatch/standalone/CMakeFiles/compute_distance.dir/build make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/cli/CMakeFiles/plastimatch.dir/build.make src/plastimatch/cli/CMakeFiles/plastimatch.dir/build make -f src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build.make src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/build make -f src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build.make src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build.make src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/check_grad.dir/build.make src/plastimatch/standalone/CMakeFiles/check_grad.dir/build make -f src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build.make src/plastimatch/standalone/CMakeFiles/dlib_train.dir/build make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 77%] Building CXX object src/plastimatch/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make -f src/plastimatch/standalone/CMakeFiles/sobp.dir/build.make src/plastimatch/standalone/CMakeFiles/sobp.dir/build cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/dicom_info.dir/dicom_info.cxx.o -MF CMakeFiles/dicom_info.dir/dicom_info.cxx.o.d -o CMakeFiles/dicom_info.dir/dicom_info.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/dicom_info.cxx make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o [ 84%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_dose.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_jacobian.cxx [ 85%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dmap.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_dmap.cxx [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o [ 82%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o [ 87%] Building CXX object src/plastimatch/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o [ 87%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_fdk.cxx [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o [ 87%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o [ 80%] Building CXX object src/plastimatch/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o [ 87%] Building CXX object src/plastimatch/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -MF CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o.d -o CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/landmark_diff_main.cxx [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o [ 78%] Building CXX object src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o [ 87%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/dlib_train.dir/dlib_train.cxx.o -MF CMakeFiles/dlib_train.dir/dlib_train.cxx.o.d -o CMakeFiles/dlib_train.dir/dlib_train.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/dlib_train.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_autolabel_train.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_autolabel_train.cxx [ 87%] Building CXX object src/plastimatch/standalone/CMakeFiles/wed.dir/wed_main.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/sobp.dir/sobp_main.cxx.o -MF CMakeFiles/sobp.dir/sobp_main.cxx.o.d -o CMakeFiles/sobp.dir/sobp_main.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/sobp_main.cxx [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/compute_distance.dir/read_obj.cxx.o -MF CMakeFiles/compute_distance.dir/read_obj.cxx.o.d -o CMakeFiles/compute_distance.dir/read_obj.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/read_obj.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_autolabel.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_autolabel.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_bbox.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_bbox.cxx [ 78%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -MF CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o.d -o CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/shuffle_mha_main.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/compute_distance.dir/closest_point.cxx.o -MF CMakeFiles/compute_distance.dir/closest_point.cxx.o.d -o CMakeFiles/compute_distance.dir/closest_point.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/closest_point.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_add.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_add.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_add.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_add.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/check_grad.dir/check_grad.cxx.o -MF CMakeFiles/check_grad.dir/check_grad.cxx.o.d -o CMakeFiles/check_grad.dir/check_grad.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/check_grad.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_adjust.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_adjust.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/compute_distance.dir/compute_distance.cxx.o -MF CMakeFiles/compute_distance.dir/compute_distance.cxx.o.d -o CMakeFiles/compute_distance.dir/compute_distance.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/compute_distance.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_benchmark.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_benchmark.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -MF CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o.d -o CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/merge_vector_fields.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_boundary.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_boundary.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_compare.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_compare.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/inih-r29 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/standalone/CMakeFiles/wed.dir/wed_main.cxx.o -MF CMakeFiles/wed.dir/wed_main.cxx.o.d -o CMakeFiles/wed.dir/wed_main.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/standalone/wed_main.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_compose.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_compose.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_crop.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_crop.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dice.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_dice.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_diff.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_diff.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_drr.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_dvh.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_filter.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_gamma.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_header.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_header.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_intersect.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_lm_warp.cxx cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_mabs.cxx [ 88%] Linking CXX executable ../../../hnd_to_pfm [ 88%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/hnd_to_pfm.dir/link.txt --verbose=1 cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac 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/usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 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/usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-linux-gn[ 88%] Linking CXX executable ../../../bragg_curve cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/bragg_curve.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/bragg_curve.dir/link.d CMakeFiles/bragg_curve.dir/bragg_curve_main.cxx.o CMakeFiles/bragg_curve.dir/bragg_curve_opts.cxx.o -o ../../../bragg_curve -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86[ 89%] Linking CXX executable ../../../landmark_diff cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/landmark_diff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/landmark_diff.dir/link.d CMakeFiles/landmark_diff.dir/landmark_diff_main.cxx.o -o ../../../landmark_diff -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/li[ 89%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_maximum.cxx _64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 89%] Built target bragg_curve [ 90%] Linking CXX executable ../../../demons cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/demons.dir/link.txt --verbose=1 [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_ml_convert.cxx /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/demons.dir/link.d CMakeFiles/demons.dir/demons_main.cxx.o CMakeFiles/demons.dir/demons_opts.cxx.o -o ../../../demons -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl 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/usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 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/usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3u/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 90%] Built target hnd_to_pfm [ 90%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_multiply.cxx b/x86_64-linux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 90%] Built target landmark_diff [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_probe.cxx .6.8 /usr/lib/x86_64-linux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 91%] Built target demons [ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_register.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_register.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_register.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_register.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_register.cxx [ 91%] Linking CXX executable ../../../dicom_uid cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_uid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/dicom_uid.dir/link.d CMakeFiles/dicom_uid.dir/dicom_uid_main.cxx.o -o ../../../dicom_uid -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-linux-g[ 91%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_resample.cxx [ 91%] Linking CXX executable ../../../sobp cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/sobp.dir/link.txt --verbose=1 [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 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/usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 92%] Built target dicom_uid [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_segment.cxx [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_sift.cxx [ 92%] Linking CXX executable ../../../wed cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/wed.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/wed.dir/link.d CMakeFiles/wed.dir/wed_main.cxx.o -o ../../../wed -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libofstd.so.18.3.6.8 6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 92%] Built target sobp [ 92%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_stats.cxx [ 92%] Linking CXX executable ../../../shuffle_mha cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/shuffle_mha.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/shuffle_mha.dir/link.d CMakeFiles/shuffle_mha.dir/shuffle_mha_main.cxx.o -o ../../../shuffle_mha -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64[ 92%] Linking CXX executable ../../../compute_distance cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/compute_distance.dir/link.d CMakeFiles/compute_distance.dir/compute_distance.cxx.o CMakeFiles/compute_distance.dir/closest_point.cxx.o CMakeFiles/compute_distance.dir/read_obj.cxx.o -o ../../../compute_distance -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack-lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 92%] Built target wed [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_synth.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_synth_vf.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_threshold.cxx [ 93%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_thumbnail.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_union.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_union.cxx -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 94%] Built target compute_distance -linux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_warp.cxx [ 94%] Built target shuffle_mha [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_warp_dij.cxx [ 94%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_warp_pointset.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_wed.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xf_convert.cxx [ 95%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -MF CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o.d -o CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xf_invert.cxx /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx: In function 'void do_command_xio_dvh(int, char**)': /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:46:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 46 | fgets(buf, 200, fp); //XiO Dose Volume Histogram | ~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:49:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 49 | fgets(patientid, 200, fp); // patient ID, abcde1234 | ~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:50:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 50 | fgets(buf, 200, fp); // plan | ~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:51:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 51 | fgets(structurename, 200, fp); // structure name | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:52:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 52 | fgets(buf, 200, fp); // N.NN mm resolution | ~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:54:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 54 | fgets(buf, 200, fp); // number of bins | ~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:59:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 59 | fgets(buf, 200, fp); // date | ~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:60:14: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 60 | fgets(buf, 200, fp); // table header: min bin dose (cGy), bin volume (cc) | ~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:78:18: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 78 | fgets(buf, 200, fp); | ~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:72:36: warning: '-' directive writing 1 byte into a region of size between 0 and 254 [-Wformat-overflow=] 72 | sprintf(outfilename, "%s/%s-%s.txt",output_dir, patientid, structurename); | ^ In file included from /usr/include/stdio.h:970, from /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:5: In function 'int sprintf(char*, const char*, ...)', inlined from 'void do_command_xio_dvh(int, char**)' at /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/pcmd_xio_dvh.cxx:72:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:34: note: '__builtin___sprintf_chk' output 7 or more bytes (assuming 515) into a destination of size 255 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o -MF CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o.d -o CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/plastimatch_main.cxx [ 96%] Building CXX object src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/c++ -DITK_FFTIMAGEFILTERINIT_FACTORY_REGISTER_MANAGER -DITK_IMAGEIO_FACTORY_REGISTER_MANAGER -DITK_MESHIO_FACTORY_REGISTER_MANAGER -DITK_TRANSFORMIO_FACTORY_REGISTER_MANAGER -Dkiss_fft_scalar=double -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/util -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/sys -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/segment -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/register -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/reconstruct -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/qt -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/opencl -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cuda -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/dose -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/clp -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/base -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/ITKFactoryRegistration -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/itk-5.1.0 -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/DiffeomorphicDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/FastSymmetricForces -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/demons_itk_insight/LOGDomainDemons -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/nSIFT -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/liblbfgs-1.9/include -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/ransac/Common -I/build/reproducible-path/plastimatch-1.9.4+dfsg.1/libs/devillard -isystem /usr/include/hdf5/serial -isystem /usr/include/gdcm-3.0 -isystem /usr/include/ITK-5.3 -isystem /usr/include/vtk-9.3 -isystem /usr/include/freetype2 -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -std=c++17 -fPIE -Wno-cpp -Wreturn-type -MD -MT src/plastimatch/cli/CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -MF CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o.d -o CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -c /build/reproducible-path/plastimatch-1.9.4+dfsg.1/src/plastimatch/cli/plastimatch_startup.cxx [ 96%] Linking CXX executable ../../../check_grad cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/check_grad.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/check_grad.dir/link.d CMakeFiles/check_grad.dir/check_grad.cxx.o -o ../../../check_grad -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 96%] Built target check_grad [ 97%] Linking CXX executable ../../../dicom_info cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dicom_info.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/dicom_info.dir/link.d CMakeFiles/dicom_info.dir/dicom_info.cxx.o -o ../../../dicom_info -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-linux-gn[ 98%] Linking CXX executable ../../../xvi_archive cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/xvi_archive.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/xvi_archive.dir/link.d CMakeFiles/xvi_archive.dir/xvi_archive.cxx.o -o ../../../xvi_archive -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../libinih.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /u/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 98%] Built target dicom_info [ 99%] Linking CXX executable ../../../merge_vfs cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/merge_vfs.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/merge_vfs.dir/link.d CMakeFiles/merge_vfs.dir/merge_vector_fields.cxx.o -o ../../../merge_vfs -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 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/usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-liusr/lib/x86_64-linux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 99%] Built target xvi_archive [ 99%] Linking CXX executable ../../../plastimatch cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/cli && /usr/bin/cmake -E cmake_link_script 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CMakeFiles/plastimatch.dir/pcmd_dose.cxx.o CMakeFiles/plastimatch.dir/pcmd_drr.cxx.o CMakeFiles/plastimatch.dir/pcmd_dvh.cxx.o CMakeFiles/plastimatch.dir/pcmd_fdk.cxx.o CMakeFiles/plastimatch.dir/pcmd_filter.cxx.o CMakeFiles/plastimatch.dir/pcmd_gamma.cxx.o CMakeFiles/plastimatch.dir/pcmd_header.cxx.o CMakeFiles/plastimatch.dir/pcmd_intersect.cxx.o CMakeFiles/plastimatch.dir/pcmd_jacobian.cxx.o CMakeFiles/plastimatch.dir/pcmd_lm_warp.cxx.o CMakeFiles/plastimatch.dir/pcmd_mabs.cxx.o CMakeFiles/plastimatch.dir/pcmd_mask.cxx.o CMakeFiles/plastimatch.dir/pcmd_maximum.cxx.o CMakeFiles/plastimatch.dir/pcmd_ml_convert.cxx.o CMakeFiles/plastimatch.dir/pcmd_multiply.cxx.o CMakeFiles/plastimatch.dir/pcmd_probe.cxx.o CMakeFiles/plastimatch.dir/pcmd_register.cxx.o CMakeFiles/plastimatch.dir/pcmd_resample.cxx.o CMakeFiles/plastimatch.dir/pcmd_scale.cxx.o CMakeFiles/plastimatch.dir/pcmd_segment.cxx.o CMakeFiles/plastimatch.dir/pcmd_sift.cxx.o CMakeFiles/plastimatch.dir/pcmd_stats.cxx.o CMakeFiles/plastimatch.dir/pcmd_synth.cxx.o CMakeFiles/plastimatch.dir/pcmd_synth_vf.cxx.o CMakeFiles/plastimatch.dir/pcmd_threshold.cxx.o CMakeFiles/plastimatch.dir/pcmd_thumbnail.cxx.o CMakeFiles/plastimatch.dir/pcmd_union.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp_dij.cxx.o CMakeFiles/plastimatch.dir/pcmd_warp_pointset.cxx.o CMakeFiles/plastimatch.dir/pcmd_wed.cxx.o CMakeFiles/plastimatch.dir/pcmd_xio_dvh.cxx.o CMakeFiles/plastimatch.dir/pcmd_xf_convert.cxx.o CMakeFiles/plastimatch.dir/pcmd_xf_invert.cxx.o CMakeFiles/plastimatch.dir/plastimatch_main.cxx.o CMakeFiles/plastimatch.dir/plastimatch_startup.cxx.o -o ../../../plastimatch -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../clp/libplmclp.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1nux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 99%] Built target merge_vfs /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [ 99%] Built target plastimatch [100%] Linking CXX executable ../../../dlib_train cd /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/src/plastimatch/standalone && /usr/bin/cmake -E cmake_link_script CMakeFiles/dlib_train.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/plastimatch-1.9.4+dfsg.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fno-sized-deallocation -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic -fopenmp -Wl,--dependency-file=CMakeFiles/dlib_train.dir/link.d CMakeFiles/dlib_train.dir/dlib_train.cxx.o -o ../../../dlib_train -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/liblbfgs-1.9 -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/libs/specfun -L/usr/lib/x86_64-linux-gnu/lib -L/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/cmake/dcmtk/lib/x86_64-linux-gnu -L/usr/include ../clp/libplmclp.a ../../../libplmsegment.so.1.9 ../../../libplmregister.so.1.9 ../../../libplmreconstruct.so.1.9 ../../../libplmdose.so.1.9 ../../../libplmutil.so.1.9 ../../../libplmbase.so.1.9 ../../../libplmsys.so.1.9 -lz -ljpeg -lexpat -lpng /usr/lib/x86_64-linux-gnu/libITKTestKernel-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKConvolution-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKColormap-5.3.so.1 -lofstd -loflog -loficonv -ldcmdata -li2d -ldcmxml -ldcmimgle -ldcmimage -ldcmjpeg -lijg8 -lijg12 -lijg16 -ldcmjpls -ldcmtkcharls -ldcmtls -ldcmnet -ldcmsr -lcmr -ldcmdsig -ldcmwlm -ldcmqrdb -ldcmpstat -ldcmrt -ldcmiod -ldcmfg -ldcmseg -ldcmtract -ldcmpmap -ldcmect /usr/lib/x86_64-linux-gnu/libITKDICOMParser-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDenoising-5.3.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.so /usr/lib/x86_64-linux-gnu/libITKIOBruker-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOCSV-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG2000-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOLSM-5.3.so.1 -lminc2 -lm -lz -lm -ldl -lnetcdf /usr/lib/x86_64-linux-gnu/libITKIOMINC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMRC-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegistrationMethodsv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKReview-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVtkGlue-5.3.so.1 ../../../libdevillard.a ../../../libnkidecompress.a -lm /usr/lib/x86_64-linux-gnu/libdcmdata.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libdlib.so.19.24.6 -lfftw3f -lfftw3 -ldl ../../../libspecfun.a ../../../liblbfgs.a /usr/lib/x86_64-linux-gnu/libITKIOMeshBYU-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshFreeSurfer-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshGifti-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKgiftiio-5.3.so.1 -lexpat /usr/lib/x86_64-linux-gnu/libITKIOMeshOBJ-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshOFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeshBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizersv4-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitklbfgs-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBMP-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGDCM-5.3.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.3.0.24 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.3.0.24 /usr/lib/x86_64-linux-gnu/libITKIOGIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOJPEG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOMeta-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMetaIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIONIFTI-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKniftiio-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKznz-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKIONRRD-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKNrrdIO-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOPNG-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTIFF-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitktiff-5.3.so.1 -ljpeg /usr/lib/x86_64-linux-gnu/libITKIOVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKLabelMap-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFastMarching-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPolynomials-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKBiasCorrection-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDeformableMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKDiffusionTensorImage-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPDEDeformableRegistration-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKFFT-5.3.so.1 -lfftw3_threads -lfftw3 -lfftw3f_threads -lfftw3f /usr/lib/x86_64-linux-gnu/libITKImageFeature-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKOptimizers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOBioRad-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOGE-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSiemens-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOIPL-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkopenjpeg-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOXML-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOStimulate-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformHDF5-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformInsightLegacy-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformMatlab-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOTransformBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransformFactory-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKKLMRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMarkovRandomFieldsClassifiers-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKQuadEdgeMeshFiltering-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKRegionGrowing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKWatersheds-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMathematicalMorphology-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKStatistics-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkNetlibSlatec-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSpatialObjects-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKMesh-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKTransform-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKPath-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKSmoothing-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKIOImageBase-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVideoCore-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKVTK-5.3.so.1 /usr/lib/x86_64-linux-gnu/libITKCommon-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkdouble-conversion-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitksys-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libITKVNLInstantiation-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl_algo-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvnl-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkv3p_netlib-5.3.so.1 /usr/lib/x86_64-linux-gnu/libitkvcl-5.3.so.1 -lm /usr/lib/x86_64-linux-gnu/libvtkInteractionWidgets-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingOpenGL2-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingHyperTreeGrid-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingUI-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libGLEW.so /usr/lib/x86_64-linux-gnu/libX11.so /usr/lib/x86_64-linux-gnu/libvtkInteractionStyle-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingContext2D-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkImagingSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkIOImage-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingFreeType-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libfreetype.so /usr/lib/x86_64-linux-gnu/libvtkImagingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkRenderingCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersSources-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersGeneral-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkFiltersCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonExecutionModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonDataModel-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonTransforms-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMisc-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonMath-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkkissfft-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libvtkCommonCore-9.3.so.9.3 /usr/lib/x86_64-linux-gnu/libtbb.so.12.14 /usr/lib/x86_64-linux-gnu/libvtksys-9.3.so.9.3 -ldl -lblas -llapack -lsqlite3 -Wl,-Bstatic -lpthread -Wl,-Bdynamic -lz /usr/lib/x86_64-linux-gnu/liboflog.so.18.3.6.8 /usr/lib/x86_64-linux-gnu/libofstd.so.18.3.6.8 -lnsl /usr/lib/x86_64-linux-gnu/liboficonv.so.18.3.6.8 -lpthread -lrt make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' [100%] Built target dlib_train make[2]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1' dh_auto_test cd obj-x86_64-linux-gnu && make -j42 test ARGS\+=--verbose ARGS\+=-j42 make[2]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j42 UpdateCTestConfiguration from :/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/DartConfiguration.tcl Add coverage exclude regular expressions. UpdateCTestConfiguration from :/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu Constructing a list of tests Ignore test: demons-cuda-a Ignore test: demons-cuda-a-check Ignore test: drr-d Ignore test: drr-d-stats Ignore test: drr-d-check Ignore test: drr-cuda Ignore test: drr-cuda-stats Ignore test: drr-cuda-check Ignore test: drr-opencl Ignore test: drr-opencl-stats Ignore test: drr-opencl-check Ignore test: fdk-cpu-b Ignore test: fdk-cpu-b-stats Ignore test: fdk-cpu-b-check Ignore test: fdk-cpu-c Ignore test: fdk-cpu-c-stats Ignore test: fdk-cpu-c-check Ignore test: fdk-cuda-a Ignore test: fdk-cuda-a-stats Ignore test: fdk-cuda-a-check Ignore test: fdk-opencl-a Ignore test: fdk-opencl-a-stats Ignore test: fdk-opencl-a-check Ignore test: fdk-tutorial-a Ignore test: fdk-tutorial-b Ignore test: fdk-tutorial-b-stats-1 Ignore test: fdk-tutorial-b-check-1 Ignore test: fdk-tutorial-c Ignore test: fdk-tutorial-c-stats-1 Ignore test: fdk-tutorial-c-check-1 Ignore test: plm-convert-rtog-corvus-a Ignore test: plm-convert-dicom-aw-a Ignore test: plm-convert-dicom-aw-a-stats Ignore test: plm-convert-dicom-aw-a-check Ignore test: plm-convert-dicom-aw-b Ignore test: plm-convert-dicom-corvus-a Ignore test: plm-convert-dicom-pinnacle-a Ignore test: plm-convert-dicom-xio-a Ignore test: plm-convert-dicom-xio-a-stats Ignore test: plm-convert-dicom-xio-a-check Ignore test: plm-convert-dicom-xio-b Ignore test: plm-convert-dicom-xio-b-stats Ignore test: plm-convert-dicom-xio-b-check Ignore test: plm-convert-dicom-xio-c Ignore test: plm-convert-dicom-xio-c-stats Ignore test: plm-convert-dicom-xio-c-check Ignore test: plm-convert-dicom-xio-d Ignore test: plm-convert-dicom-xio-d-stats Ignore test: plm-convert-dicom-xio-d-check Ignore test: plm-convert-dicom-xio-e Ignore test: plm-convert-dicom-xio-f Ignore test: plm-convert-dicom-xio-f-stats Ignore test: plm-convert-dicom-xio-f-check Ignore test: plm-convert-dicom-xio-g Ignore test: plm-warp-dicom-xio-a Ignore test: plm-warp-dicom-xio-a-stats-1 Ignore test: plm-warp-dicom-xio-a-check-1 Ignore test: plm-warp-dicom-xio-a-stats-2 Ignore test: plm-warp-dicom-xio-a-check-2 Ignore test: plm-convert-dicom-irregular-a Ignore test: plm-convert-dicom-33-a Ignore test: plm-convert-dicom-33-a-stats-1 Ignore test: plm-convert-dicom-33-a-stats-2 Ignore test: plm-convert-dicom-33-a-check-1 Ignore test: plm-convert-dicom-33-a-check-2 Ignore test: plm-convert-xio-a Ignore test: plm-convert-xio-a-stats Ignore test: plm-convert-xio-a-check Ignore test: plm-convert-xio-b Ignore test: plm-convert-xio-b-stats Ignore test: plm-convert-xio-b-check Ignore test: plm-warp-xio-a Ignore test: plm-warp-xio-a-stats-1 Ignore test: plm-warp-xio-a-check-1 Ignore test: plm-warp-xio-a-stats-2 Ignore test: plm-warp-xio-a-check-2 Ignore test: plm-warp-xio-a-stats-3 Ignore test: plm-warp-xio-a-check-3 Ignore test: plm-warp-xio-a-stats-4 Ignore test: plm-warp-xio-a-check-4 Ignore test: plm-warp-xio-a-check-5 Ignore test: plm-warp-xio-a-check-6 Ignore test: plm-reg-itk-rigid-b Ignore test: plm-reg-itk-rigid-b-stats-1 Ignore test: plm-reg-itk-rigid-b-check-1 Ignore test: plm-bsp-cuda Ignore test: plm-bsp-cuda-stats Ignore test: plm-bsp-cuda-check Ignore test: bragg-curve Ignore test: bragg-curve-check Ignore test: proton-dose-7a Ignore test: proton-dose-8d-check Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end Connected to MAKE jobserver test 10 Start 10: gauss-1 10: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;0 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 10: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 10: Test timeout computed to be: 1500 test 11 Start 11: gauss-2 11: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 11: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 11: Test timeout computed to be: 1500 test 12 Start 12: gauss-3 12: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-3" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;-1000;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 12: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 12: Test timeout computed to be: 1500 test 14 Start 14: gauss-5 14: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-5" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;20 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 14: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 14: Test timeout computed to be: 1500 test 29 Start 29: rect-1 29: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output-type;float;--output-dose-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--output-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--pattern;rect;--dim;38 38 38;--background;0;--foreground;-1000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 29: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 29: Test timeout computed to be: 1500 test 1 Start 1: black-1 1: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=black-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha;--output-type;float;--pattern;rect;--origin;-25 -25 -25;--dim;40 40 40;--volume-size;50 50 50;--background;-1000;--foreground;-1000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 1: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 1: Test timeout computed to be: 1500 test 2 Start 2: cyl-1 2: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=cyl-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--output-type;uchar;--pattern;cylinder;--origin;-19.5 -19.5 -49.5;--dim;40 40 100;--spacing;1 1 1;--background;0;--foreground;1;--radius;10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 2: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 2: Test timeout computed to be: 1500 test 3 Start 3: cyl-mask-2 3: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=cyl-mask-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd;--output-type;uchar;--pattern;rect;--origin;-19.5 -19.5 -49.5;--dim;40 40 100;--spacing;1 1 1;--background;0;--foreground;1;--rect-size;-20 20 -20 20 -30 45" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 3: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 3: Test timeout computed to be: 1500 test 5 Start 5: cyl-mask-3 5: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=cyl-mask-3" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd;--output-type;uchar;--pattern;rect;--origin;-19.5 -19.5 -49.5;--dim;40 40 100;--spacing;1 1 1;--background;0;--foreground;1;--rect-size;-20 20 -20 20 -45 40" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 5: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 5: Test timeout computed to be: 1500 test 7 Start 7: donut-1 7: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=donut-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha;--output-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt;--output-type;float;--pattern;donut;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--donut-radius;10 10 10;--background;-1000;--foreground;0;--filenames-without-uids;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-prefix;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-prefix/" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 7: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 7: Test timeout computed to be: 1500 test 8 Start 8: donut-2 8: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=donut-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--output-type;uchar;--pattern;donut;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--donut-radius;10 10 10;--background;0;--foreground;1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 8: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 8: Test timeout computed to be: 1500 test 9 Start 9: gabor-01 9: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gabor-01" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--pattern;gabor;--origin;-5 -5 -5;--dim;11 11 11;--spacing;1 1 1;--gabor-k-fib;0 1;--gauss-center;0 0 0;--gauss-std;3 3 3;--background;0;--foreground;1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 9: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 9: Test timeout computed to be: 1500 test 13 Start 13: gauss-4 13: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-4" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output-type;float;--pattern;gauss;--origin;+25 +25 -25;--dim;38 38 38;--spacing;-1.31579 -1.31579 2;--background;-1000;--foreground;0;--gauss-center;0 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 13: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 13: Test timeout computed to be: 1500 test 15 Start 15: gauss-6 15: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-6" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha;--output-type;float;--pattern;gauss;--origin;-15 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 15: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 15: Test timeout computed to be: 1500 test 17 Start 17: gauss-double-1 17: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-double-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 17: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 17: Test timeout computed to be: 1500 test 18 Start 18: gauss-double-2 18: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-double-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 18: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 18: Test timeout computed to be: 1500 test 19 Start 19: gauss-ushort-1 19: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-ushort-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 19: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 19: Test timeout computed to be: 1500 test 20 Start 20: gauss-ushort-2 20: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-ushort-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-2.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 20: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 20: Test timeout computed to be: 1500 test 21 Start 21: lung-1 21: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=lung-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;--output-prefix;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom;--pattern;lung;--lung-tumor-pos;0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 21: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 21: Test timeout computed to be: 1500 test 27 Start 27: ptv-1 27: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=ptv-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha;--pattern;rect;--dim;60 60 60;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-150 -150 -150;--spacing;5 5 5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 27: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 27: Test timeout computed to be: 1500 test 28 Start 28: ptv-2 28: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=ptv-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha;--pattern;rect;--dim;40 40 40;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-100 -100 -100;--spacing;5 5 5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 28: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 28: Test timeout computed to be: 1500 test 30 Start 30: rect-2 30: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-2;--filenames-without-uids" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 30: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 30: Test timeout computed to be: 1500 test 31 Start 31: rect-2s 31: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-2s" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--spacing;13.158 13.158 13.158;--rect-size; 200 200 200;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 31: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 31: Test timeout computed to be: 1500 test 32 Start 32: rect-3 32: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-3" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-3;--filenames-without-uids" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 32: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 32: Test timeout computed to be: 1500 test 33 Start 33: rect-4 33: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-4" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 50 -50 50 -50 50" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 33: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 33: Test timeout computed to be: 1500 test 34 Start 34: rect-5 34: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-5" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;-300 -150 -250;--direction-cosines;rotated-1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 34: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 34: Test timeout computed to be: 1500 test 40 Start 40: rect-10-roi-1 40: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-10-roi-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-60 60 -60 60 -60 60" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 40: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 40: Test timeout computed to be: 1500 test 43 Start 43: rect-11-roi 43: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-11-roi" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 80 -50 80 -50 80" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 43: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 43: Test timeout computed to be: 1500 test 44 Start 44: rect-12 44: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-12" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;10;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 44: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 44: Test timeout computed to be: 1500 test 45 Start 45: rect-13 45: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-13" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;11;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 45: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 45: Test timeout computed to be: 1500 test 46 Start 46: rect-14 46: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-14" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;10;--rect-size;-2.5 6.5 -4.5 4.5 -4.5 4.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 46: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 46: Test timeout computed to be: 1500 test 47 Start 47: rect-15 47: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-15" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;243.421 243.421 -243.421;--spacing;13.1579 13.1579 13.1579;--direction-cosines;-1 0 0 0 -1 0 0 0 1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 47: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 47: Test timeout computed to be: 1500 test 48 Start 48: rect-16 48: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-16" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--origin;243.421 243.421 -243.421;--spacing;13.1579 13.1579 13.1579;--direction-cosines;-1 0 0 0 -1 0 0 0 1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 48: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 48: Test timeout computed to be: 1500 test 49 Start 49: rect-17 49: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-17" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha;--pattern;rect;--dim;60 60 60;--background;-1000;--foreground;0;--rect-size;-100 100 -100 100 -100 100;--origin;-150 -150 -150;--spacing;5 5 5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 49: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 49: Test timeout computed to be: 1500 test 57 Start 57: rectarr-03-a 57: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-03-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output-type;float;--pattern;rect;--dim;30 50 30;--background;0;--foreground;70;--rect-size;-5 5 -15 -5 -5 5;--origin;-14.5 -24.5 -14.5;--spacing;1 1 1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 57: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 57: Test timeout computed to be: 1500 test 62 Start 62: sphere-1 62: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-type;uchar;--pattern;sphere;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;255;--center;0 0 0;--radius;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 62: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 62: Test timeout computed to be: 1500 test 63 Start 63: sphere-2 63: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;50 50 50" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 63: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 63: Test timeout computed to be: 1500 test 64 Start 64: sphere-3 64: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-3" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 64: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 64: Test timeout computed to be: 1500 test 66 Start 66: sphere-5 66: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-5" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha;--output-type;uchar;--pattern;sphere;--origin;-19 -19 -19;--dim;20 20 20;--spacing;2 2 2;--background;0;--foreground;1;--center;0 0 0;--radius;21" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 66: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 66: Test timeout computed to be: 1500 test 72 Start 72: vf-zero 72: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-zero" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--xf-zero;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 72: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 72: Test timeout computed to be: 1500 test 73 Start 73: vf-trans-1 73: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-trans-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--xf-trans;10 0 0;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 73: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 73: Test timeout computed to be: 1500 test 74 Start 74: vf-trans-2 74: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-trans-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;--xf-trans;0 10 0;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 74: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 74: Test timeout computed to be: 1500 10: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 10: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;0 0 0;--gauss-std;10 10 10 10: EXPECTED_ERRNO is 11: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 11: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;10 10 10 11: EXPECTED_ERRNO is 12: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 12: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;-1000;--gauss-center;10 0 0;--gauss-std;10 10 10 12: EXPECTED_ERRNO is 14: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 14: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;20 0 0;--gauss-std;10 10 10 14: EXPECTED_ERRNO is 29: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 29: PARMS is synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output-type;float;--output-dose-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--output-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--pattern;rect;--dim;38 38 38;--background;0;--foreground;-1000 29: EXPECTED_ERRNO is 1: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 1: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha;--output-type;float;--pattern;rect;--origin;-25 -25 -25;--dim;40 40 40;--volume-size;50 50 50;--background;-1000;--foreground;-1000 1: EXPECTED_ERRNO is 2: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 2: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--output-type;uchar;--pattern;cylinder;--origin;-19.5 -19.5 -49.5;--dim;40 40 100;--spacing;1 1 1;--background;0;--foreground;1;--radius;10 2: EXPECTED_ERRNO is 3: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 3: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd;--output-type;uchar;--pattern;rect;--origin;-19.5 -19.5 -49.5;--dim;40 40 100;--spacing;1 1 1;--background;0;--foreground;1;--rect-size;-20 20 -20 20 -30 45 3: EXPECTED_ERRNO is 5: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 5: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd;--output-type;uchar;--pattern;rect;--origin;-19.5 -19.5 -49.5;--dim;40 40 100;--spacing;1 1 1;--background;0;--foreground;1;--rect-size;-20 20 -20 20 -45 40 5: EXPECTED_ERRNO is 7: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 7: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha;--output-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt;--output-type;float;--pattern;donut;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--donut-radius;10 10 10;--background;-1000;--foreground;0;--filenames-without-uids;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-prefix;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-prefix/ 7: EXPECTED_ERRNO is 8: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 8: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--output-type;uchar;--pattern;donut;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--donut-radius;10 10 10;--background;0;--foreground;1 8: EXPECTED_ERRNO is 9: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 9: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--pattern;gabor;--origin;-5 -5 -5;--dim;11 11 11;--spacing;1 1 1;--gabor-k-fib;0 1;--gauss-center;0 0 0;--gauss-std;3 3 3;--background;0;--foreground;1 9: EXPECTED_ERRNO is 13: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 13: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output-type;float;--pattern;gauss;--origin;+25 +25 -25;--dim;38 38 38;--spacing;-1.31579 -1.31579 2;--background;-1000;--foreground;0;--gauss-center;0 0 0;--gauss-std;10 10 10 13: EXPECTED_ERRNO is 15: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 15: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha;--output-type;float;--pattern;gauss;--origin;-15 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;10 10 10 15: EXPECTED_ERRNO is 17: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 17: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10 17: EXPECTED_ERRNO is 18: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 18: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha;--output-type;double;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10 18: EXPECTED_ERRNO is 19: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 19: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;0 0 0;--gauss-std;10 10 10 19: EXPECTED_ERRNO is 20: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 20: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-2.mha;--output-type;ushort;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;1000;--gauss-center;10 0 0;--gauss-std;10 10 10 20: EXPECTED_ERRNO is 21: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 21: PARMS is synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;--output-prefix;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom;--pattern;lung;--lung-tumor-pos;0 21: EXPECTED_ERRNO is 27: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 27: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha;--pattern;rect;--dim;60 60 60;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-150 -150 -150;--spacing;5 5 5 27: EXPECTED_ERRNO is 28: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 28: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha;--pattern;rect;--dim;40 40 40;--background;0;--foreground;6;--rect-size;20 20 20;--origin;-100 -100 -100;--spacing;5 5 5 28: EXPECTED_ERRNO is 30: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 30: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-2;--filenames-without-uids 30: EXPECTED_ERRNO is 31: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 31: PARMS is synth;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--spacing;13.158 13.158 13.158;--rect-size; 200 200 200;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha 31: EXPECTED_ERRNO is 32: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 32: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;float;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--patient-name;RECT^SYNTH;--patient-id;RECT-SYNTH;--series-description;rect-3;--filenames-without-uids 32: EXPECTED_ERRNO is 33: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 33: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 50 -50 50 -50 50 33: EXPECTED_ERRNO is 34: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 34: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;-300 -150 -250;--direction-cosines;rotated-1 34: EXPECTED_ERRNO is 40: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 40: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-60 60 -60 60 -60 60 40: EXPECTED_ERRNO is 43: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 43: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-50 80 -50 80 -50 80 43: EXPECTED_ERRNO is 44: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 44: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;10;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5 44: EXPECTED_ERRNO is 45: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 45: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;11;--rect-size;-4.5 4.5 -4.5 4.5 -4.5 4.5 45: EXPECTED_ERRNO is 46: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 46: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha;--output-type;float;--pattern;rect;--dim;20 20 20;--origin;-9.5 -9.5 -9.5;--spacing;1 1 1;--background;0;--foreground;10;--rect-size;-2.5 6.5 -4.5 4.5 -4.5 4.5 46: EXPECTED_ERRNO is 47: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 47: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;243.421 243.421 -243.421;--spacing;13.1579 13.1579 13.1579;--direction-cosines;-1 0 0 0 -1 0 0 0 1 47: EXPECTED_ERRNO is 48: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 48: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-30 70 -50 50 -50 50;--origin;243.421 243.421 -243.421;--spacing;13.1579 13.1579 13.1579;--direction-cosines;-1 0 0 0 -1 0 0 0 1 48: EXPECTED_ERRNO is 49: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 49: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha;--pattern;rect;--dim;60 60 60;--background;-1000;--foreground;0;--rect-size;-100 100 -100 100 -100 100;--origin;-150 -150 -150;--spacing;5 5 5 49: EXPECTED_ERRNO is 57: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 57: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output-type;float;--pattern;rect;--dim;30 50 30;--background;0;--foreground;70;--rect-size;-5 5 -15 -5 -5 5;--origin;-14.5 -24.5 -14.5;--spacing;1 1 1 57: EXPECTED_ERRNO is 62: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 62: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-type;uchar;--pattern;sphere;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;0;--foreground;255;--center;0 0 0;--radius;10 10 10 62: EXPECTED_ERRNO is 63: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 63: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;50 50 50 63: EXPECTED_ERRNO is 64: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 64: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50 64: EXPECTED_ERRNO is 66: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 66: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha;--output-type;uchar;--pattern;sphere;--origin;-19 -19 -19;--dim;20 20 20;--spacing;2 2 2;--background;0;--foreground;1;--center;0 0 0;--radius;21 66: EXPECTED_ERRNO is 72: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 72: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--xf-zero;--dim;38 38 38 72: EXPECTED_ERRNO is 73: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 73: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--xf-trans;10 0 0;--dim;38 38 38 73: EXPECTED_ERRNO is 74: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 74: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;--xf-trans;0 10 0;--dim;38 38 38 74: EXPECTED_ERRNO is 11: RETVAL: 0 11: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 11: 11: STDERR: 10: RETVAL: 0 10: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 10: 10: STDERR: 11: Not an error 17: RETVAL: 0 17: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha 17: 17: STDERR: 17: Not an error 12: RETVAL: 0 12: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha 12: 12: STDERR: 3: RETVAL: 0 3: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd 3: 3: STDERR: 12: Not an error 14: RETVAL: 0 1/578 Test #11: gauss-2 ............................... Passed 0.20 sec 14: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha 14: 14: STDERR: 5: RETVAL: 0 5: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd 5: 5: STDERR: 10: Not an error test 530 Start 530: plm-xf-convert-d 530: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-xf-convert.txt;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-type;itk_bspline" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 530: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 530: Test timeout computed to be: 1500 14: Not an error 5: Not an error 3: Not an error 2: RETVAL: 0 2: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd 2: 2: STDERR: 2/578 Test #12: gauss-3 ............................... Passed 0.21 sec 3/578 Test #17: gauss-double-1 ........................ Passed 0.19 sec 2: Not an error test 22 Start 22: lung-2 22: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=lung-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2-dicom;--pattern;lung;--lung-tumor-pos;-5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 22: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 22: Test timeout computed to be: 1500 test 37 Start 37: rect-8 37: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-8" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-30 70 -50 50 -50 50" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 37: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 37: Test timeout computed to be: 1500 13: RETVAL: 0 13: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha 13: 13: STDERR: 13: Not an error 8: RETVAL: 0 8: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha 8: 8: STDERR: 8: Not an error 15: RETVAL: 0 15: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha 15: 15: STDERR: 15: Not an error 1: RETVAL: 0 1: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha 1: 1: STDERR: 1: Not an error 4/578 Test #10: gauss-1 ............................... Passed 0.23 sec 5/578 Test #14: gauss-5 ............................... Passed 0.22 sec 6/578 Test #2: cyl-1 ................................. Passed 0.22 sec 7/578 Test #3: cyl-mask-2 ............................ Passed 0.22 sec 8/578 Test #5: cyl-mask-3 ............................ Passed 0.22 sec 9/578 Test #8: donut-2 ............................... Passed 0.21 sec 10/578 Test #13: gauss-4 ............................... Passed 0.21 sec 11/578 Test #15: gauss-6 ............................... Passed 0.21 sec 9: RETVAL: 0 9: STDOUT: Gabor: 0 1 -> (0.000000 -1.570796) -> (-0.000000 -0.000000 -1.000000) 9: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha 9: 9: STDERR: 9: Not an error test 99 Start 99: drr-a 99: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=drr;-a;20;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 99: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 99: Test timeout computed to be: 1500 test 285 Start 285: plm-reg-itk-translation 285: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-translation" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 285: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 285: Test timeout computed to be: 1500 test 317 Start 317: plm-bsp-mse-h 317: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 317: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 317: Test timeout computed to be: 1500 test 340 Start 340: plm-bsp-mi-c-2 340: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-c-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 340: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 340: Test timeout computed to be: 1500 test 443 Start 443: plm-reg-compose 443: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-compose" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-reg-compose.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 443: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 443: Test timeout computed to be: 1500 test 4 Start 4: cyl-2 4: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=cyl-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=mask;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 4: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 4: Test timeout computed to be: 1500 test 6 Start 6: cyl-3 6: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=cyl-3" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=mask;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 6: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 6: Test timeout computed to be: 1500 test 38 Start 38: rect-9 38: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-9" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha;--output-type;uchar;--pattern;rect;--dim;47 47 47;--background;0;--foreground;1;--rect-size;-50 50 -50 50 -50 50" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 38: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 38: Test timeout computed to be: 1500 530: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 530: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-xf-convert.txt;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-type;itk_bspline 530: EXPECTED_ERRNO is 22: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 22: PARMS is synth;--filenames-without-uids;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2-dicom;--pattern;lung;--lung-tumor-pos;-5 22: EXPECTED_ERRNO is 37: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 37: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-30 70 -50 50 -50 50 37: EXPECTED_ERRNO is 31: RETVAL: 0 31: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha 31: 31: STDERR: 31: Not an error 28: RETVAL: 0 28: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha 28: 28: STDERR: 28: Not an error 34: RETVAL: 0 34: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha 34: 34: STDERR: 34: Not an error 33: RETVAL: 0 33: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha 33: 33: STDERR: 33: Not an error 27: RETVAL: 0 27: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha 27: 27: STDERR: 27: Not an error 18: RETVAL: 0 18: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha 18: 18: STDERR: 18: Not an error 20: RETVAL: 0 20: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-2.mha 20: 20: STDERR: 20: Not an error 40: RETVAL: 0 40: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha 40: 40: STDERR: 40: Not an error 45: RETVAL: 0 45: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha 45: 45: STDERR: 45: Not an error 44: RETVAL: 0 44: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha 44: 44: STDERR: 44: Not an error 43: RETVAL: 0 43: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha 43: 43: STDERR: 99: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 99: PARMS is drr;-a;20;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 99: EXPECTED_ERRNO is 12/578 Test #1: black-1 ............................... Passed 0.26 sec 13/578 Test #9: gabor-01 .............................. Passed 0.25 sec 14/578 Test #18: gauss-double-2 ........................ Passed 0.25 sec 15/578 Test #20: gauss-ushort-2 ........................ Passed 0.24 sec 16/578 Test #27: ptv-1 ................................. Passed 0.24 sec 17/578 Test #28: ptv-2 ................................. Passed 0.23 sec 18/578 Test #31: rect-2s ............................... Passed 0.23 sec 19/578 Test #33: rect-4 ................................ Passed 0.23 sec 20/578 Test #34: rect-5 ................................ Passed 0.22 sec 21/578 Test #40: rect-10-roi-1 ......................... Passed 0.22 sec 22/578 Test #45: rect-13 ............................... Passed 0.21 sec 23/578 Test #44: rect-12 ............................... Passed 0.21 sec 43: Not an error 317: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 317: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h.txt 317: EXPECTED_ERRNO is test 52 Start 52: rectarr-01-a 52: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-01-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output-type;float;--pattern;rect;--dim;30 50 30;--background;-1000;--foreground;0;--rect-size;-5 5 -15 -5 -5 5;--origin;-14.5 -24.5 -14.5;--spacing;1 1 1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 52: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 52: Test timeout computed to be: 1500 test 67 Start 67: sphere-6 67: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-6" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 67: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 67: Test timeout computed to be: 1500 test 68 Start 68: sphere-7 68: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-7" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 68: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 68: Test timeout computed to be: 1500 test 75 Start 75: vf-radial-1 75: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-radial-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha;--xf-radial;--radial-center;0 0 0;--radial-mag;10;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 75: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 75: Test timeout computed to be: 1500 test 91 Start 91: plm-diff-a 91: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-diff-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=diff;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 91: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 91: Test timeout computed to be: 1500 test 102 Start 102: drr-b 102: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=drr;-a;20;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b/out_;-i;uniform;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 102: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 102: Test timeout computed to be: 1500 test 105 Start 105: drr-c 105: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=drr;-a;20;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-c/out_;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 105: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 105: Test timeout computed to be: 1500 test 142 Start 142: plm-adjust-a 142: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd;--pw-linear;0,100" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 142: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 142: Test timeout computed to be: 1500 test 145 Start 145: plm-adjust-b 145: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd;--pw-linear;-inf,1,0,100,inf,1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 145: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 145: Test timeout computed to be: 1500 443: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 443: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-reg-compose.txt 443: EXPECTED_ERRNO is 285: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 285: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation.txt 285: EXPECTED_ERRNO is 24/578 Test #43: rect-11-roi ........................... Passed 0.25 sec test 148 Start 148: plm-adjust-c 148: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd;--linear;100,1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 148: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 148: Test timeout computed to be: 1500 test 151 Start 151: plm-adjust-d 151: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd;--pw-linear;-inf,0,-800,-800,-600,-600,inf,0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 151: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 151: Test timeout computed to be: 1500 test 154 Start 154: plm-adjust-e 154: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd;--linear;1000,2.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 154: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 154: Test timeout computed to be: 1500 46: RETVAL: 0 46: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha 46: 46: STDERR: 46: Not an error 25/578 Test #46: rect-14 ............................... Passed 0.26 sec 340: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 340: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2.txt 340: EXPECTED_ERRNO is 4: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 4: PARMS is mask;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-2.nrrd;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd 4: EXPECTED_ERRNO is 6: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 6: PARMS is mask;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-1.nrrd;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-mask-3.nrrd;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd 6: EXPECTED_ERRNO is 47: RETVAL: 0 47: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha 47: 47: STDERR: 47: Not an error 26/578 Test #47: rect-15 ............................... Passed 0.27 sec 57: RETVAL: 0 57: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha 57: 57: STDERR: 57: Not an error 27/578 Test #57: rectarr-03-a .......................... Passed 0.26 sec 38: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 38: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha;--output-type;uchar;--pattern;rect;--dim;47 47 47;--background;0;--foreground;1;--rect-size;-50 50 -50 50 -50 50 38: EXPECTED_ERRNO is 49: RETVAL: 0 49: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha 49: 49: STDERR: 49: Not an error 28/578 Test #49: rect-17 ............................... Passed 0.27 sec 19: RETVAL: 0 19: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha 19: 19: STDERR: 19: Not an error 29/578 Test #19: gauss-ushort-1 ........................ Passed 0.31 sec 52: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 52: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output-type;float;--pattern;rect;--dim;30 50 30;--background;-1000;--foreground;0;--rect-size;-5 5 -15 -5 -5 5;--origin;-14.5 -24.5 -14.5;--spacing;1 1 1 52: EXPECTED_ERRNO is 67: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 67: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50 67: EXPECTED_ERRNO is 68: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 68: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--output-type;uchar;--pattern;sphere;--dim;38 38 38;--background;0;--foreground;1;--center;0 0 0;--radius;50 50 50 68: EXPECTED_ERRNO is test 58 Start 58: rectarr-03 58: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-03" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-5 5 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 58: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 58: Test timeout computed to be: 1500 test 59 Start 59: rectarr-04 59: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-04" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-10 0 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 59: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 59: Test timeout computed to be: 1500 test 157 Start 157: plm-adjust-f 157: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd;--hist-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--hist-levels;128;--hist-points;5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 157: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 157: Test timeout computed to be: 1500 test 160 Start 160: plm-adjust-g 160: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd;--linear-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 160: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 160: Test timeout computed to be: 1500 test 163 Start 163: plm-adjust-h 163: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd;--linear-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--input-mask;donut-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 163: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 163: Test timeout computed to be: 1500 test 166 Start 166: plm-adjust-i 166: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd;--local-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-shift.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 166: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 166: Test timeout computed to be: 1500 75: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 75: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha;--xf-radial;--radial-center;0 0 0;--radial-mag;10;--dim;38 38 38 75: EXPECTED_ERRNO is 91: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 91: PARMS is diff;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha 91: EXPECTED_ERRNO is 105: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 105: PARMS is drr;-a;20;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-c/out_;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha 105: EXPECTED_ERRNO is 102: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 102: PARMS is drr;-a;20;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b/out_;-i;uniform;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 102: EXPECTED_ERRNO is 63: RETVAL: 0 63: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha 63: 63: STDERR: 63: Not an error 64: RETVAL: 0 64: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha 64: 64: STDERR: 64: Not an error 62: RETVAL: 0 62: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha 62: 62: STDERR: 62: Not an error 142: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 142: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd;--pw-linear;0,100 142: EXPECTED_ERRNO is 145: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 145: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd;--pw-linear;-inf,1,0,100,inf,1 145: EXPECTED_ERRNO is 73: RETVAL: 0 73: STDOUT: Setting header 73: Origin = -243.4211 -243.4211 -243.4211 73: Size = 38 38 38 73: Spacing = 13.1579 13.1579 13.1579 73: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 73: Header was set 73: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha 73: 73: STDERR: 73: Not an error 72: RETVAL: 0 72: STDOUT: Setting header 72: Origin = -243.4211 -243.4211 -243.4211 72: Size = 38 38 38 72: Spacing = 13.1579 13.1579 13.1579 72: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 72: Header was set 72: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha 72: 72: STDERR: 72: Not an error 48: RETVAL: 0 48: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha 48: 48: STDERR: 48: Not an error 148: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 148: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd;--linear;100,1 148: EXPECTED_ERRNO is 151: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 151: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd;--pw-linear;-inf,0,-800,-800,-600,-600,inf,0 151: EXPECTED_ERRNO is 30/578 Test #62: sphere-1 .............................. Passed 0.28 sec 31/578 Test #63: sphere-2 .............................. Passed 0.27 sec 32/578 Test #64: sphere-3 .............................. Passed 0.27 sec 33/578 Test #72: vf-zero ............................... Passed 0.26 sec 34/578 Test #73: vf-trans-1 ............................ Passed 0.26 sec test 136 Start 136: plm-add-vf-a 136: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=add;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 136: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 136: Test timeout computed to be: 1500 test 169 Start 169: plm-adjust-j 169: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-j" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd;--local-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-shift.nrrd;--local-blending-off" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 169: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 169: Test timeout computed to be: 1500 test 210 Start 210: plm-convert-dose-scale 210: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dose-scale" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input-dose-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-dose-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha;--dose-scale;77.7" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 210: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 210: Test timeout computed to be: 1500 test 213 Start 213: plm-crop-a 213: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=crop;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a.mha;--voxels;5 15 3 18 7 9" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 213: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 213: Test timeout computed to be: 1500 test 216 Start 216: plm-crop-b 216: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=crop;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b.mha;--coordinates;-15 10 3 18 -12 -7" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 216: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 216: Test timeout computed to be: 1500 35/578 Test #48: rect-16 ............................... Passed 0.31 sec 66: RETVAL: 0 66: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha 66: 66: STDERR: 66: Not an error 36/578 Test #66: sphere-5 .............................. Passed 0.29 sec 74: RETVAL: 0 74: STDOUT: Setting header 74: Origin = -243.4211 -243.4211 -243.4211 74: Size = 38 38 38 74: Spacing = 13.1579 13.1579 13.1579 74: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 74: Header was set 74: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha 74: 74: STDERR: 74: Not an error 37/578 Test #74: vf-trans-2 ............................ Passed 0.28 sec 154: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 154: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd;--linear;1000,2.5 154: EXPECTED_ERRNO is 58: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 58: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-5 5 5 15 -5 5 58: EXPECTED_ERRNO is test 94 Start 94: plm-diff-b 94: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-diff-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=diff;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 94: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 94: Test timeout computed to be: 1500 test 139 Start 139: plm-add-vf-b 139: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=average;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 139: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 139: Test timeout computed to be: 1500 test 172 Start 172: plm-boundary-a 172: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;adaptive;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 172: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 172: Test timeout computed to be: 1500 59: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 59: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha;--output-type;float;--pattern;rect;--background;0;--foreground;50;--rect-size;-10 0 5 15 -5 5 59: EXPECTED_ERRNO is 157: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 157: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd;--hist-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--hist-levels;128;--hist-points;5 157: EXPECTED_ERRNO is 160: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 160: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd;--linear-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha 160: EXPECTED_ERRNO is 163: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 163: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd;--linear-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gabor-01.mha;--input-mask;donut-2.mha 163: EXPECTED_ERRNO is 166: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 166: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd;--local-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-shift.nrrd 166: EXPECTED_ERRNO is 7: RETVAL: 0 7: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha 7: Converting from ITK_UCHAR to ITK_UCHAR_VEC 7: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha 7: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-prefix//Foreground.mha 7: save_ss_img: save_ss_list 7: Done. 7: Doing extraction 7: Keyholizing structure 0. 7: Write: DoseGridScaling = 0.000000 7: 7: STDERR: 7: Not an error 136: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 136: PARMS is add;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha 136: EXPECTED_ERRNO is 169: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 169: PARMS is adjust;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd;--local-match;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha;--patch-size;3 3 3;--ref-mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha;--local-scale-out;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-scale.nrrd;--local-shift-out;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-shift.nrrd;--local-blending-off 169: EXPECTED_ERRNO is 29: RETVAL: 0 29: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha 29: Converting from ITK_UCHAR to ITK_UCHAR_VEC 29: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha 29: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha 29: save_ss_img: save_ss_list 29: Done. 29: Doing extraction 29: Keyholizing structure 0. 29: Write: DoseGridScaling = 0.000000 29: 29: STDERR: 29: Not an error 213: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 213: PARMS is crop;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a.mha;--voxels;5 15 3 18 7 9 213: EXPECTED_ERRNO is 210: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 210: PARMS is convert;--input-dose-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-3.mha;--output-dose-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha;--dose-scale;77.7 210: EXPECTED_ERRNO is 216: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 216: PARMS is crop;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b.mha;--coordinates;-15 10 3 18 -12 -7 216: EXPECTED_ERRNO is 94: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 94: PARMS is diff;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha 94: EXPECTED_ERRNO is 38/578 Test #29: rect-1 ................................ Passed 0.41 sec 39/578 Test #7: donut-1 ............................... Passed 0.40 sec test 187 Start 187: plm-convert-dicom-a 187: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom/rtss.dcm;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha;--output-ss-list;plm-convert-dicom-a-ss.txt;--output-cxt;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-prefix;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-prefix" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 187: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 187: Test timeout computed to be: 1500 test 175 Start 175: plm-boundary-b 175: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;zero-pad;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 175: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 175: Test timeout computed to be: 1500 30: RETVAL: 0 30: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 30: Doing extraction 30: Keyholizing structure 0. 30: Write: DoseGridScaling = 0.000000 30: 30: STDERR: 30: Not an error 37: RETVAL: 0 37: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha 37: 37: STDERR: 37: Not an error 40/578 Test #30: rect-2 ................................ Passed 0.39 sec test 178 Start 178: plm-boundary-c 178: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;edge-pad;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 178: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 178: Test timeout computed to be: 1500 32: RETVAL: 0 32: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 32: Doing extraction 32: Keyholizing structure 0. 32: Write: DoseGridScaling = 0.000000 32: 32: STDERR: 172: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 172: PARMS is boundary;--boundary-behavior;adaptive;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha 172: EXPECTED_ERRNO is 41/578 Test #37: rect-8 ................................ Passed 0.22 sec test 181 Start 181: plm-boundary-d 181: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;adaptive;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 181: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 181: Test timeout computed to be: 1500 32: Not an error 187: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 187: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom/rtss.dcm;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha;--output-ss-list;plm-convert-dicom-a-ss.txt;--output-cxt;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-prefix;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-prefix 187: EXPECTED_ERRNO is 139: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 139: PARMS is average;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha 139: EXPECTED_ERRNO is 530: RETVAL: 0 530: STDOUT: bspline_xform_initialize 530: rdims = (2,2,2) 530: vox_per_rgn = (11,11,11) 530: cdims = (5 5 5) 530: about to xform_convert 530: did xform_convert 530: 530: STDERR: 42/578 Test #32: rect-3 ................................ Passed 0.40 sec 530: Not an error test 114 Start 114: landmark-warp-a 114: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=lm-warp;-a;tps;-f;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha;-V;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 114: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 114: Test timeout computed to be: 1500 175: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 175: PARMS is boundary;--boundary-behavior;zero-pad;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha 175: EXPECTED_ERRNO is 43/578 Test #530: plm-xf-convert-d ...................... Passed 0.25 sec 181: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 181: PARMS is boundary;--boundary-behavior;adaptive;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha 181: EXPECTED_ERRNO is test 119 Start 119: landmark-warp-b 119: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=lm-warp;-a;wendland;-f;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha;-V;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha;-r;90;-d;0;-Y;0.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 119: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 119: Test timeout computed to be: 1500 178: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 178: PARMS is boundary;--boundary-behavior;edge-pad;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha 178: EXPECTED_ERRNO is 114: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 114: PARMS is lm-warp;-a;tps;-f;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha;-V;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha 114: EXPECTED_ERRNO is 38: RETVAL: 0 38: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha 38: 38: STDERR: 38: Not an error 68: RETVAL: 0 68: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha 68: 68: STDERR: 68: Not an error 119: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 119: PARMS is lm-warp;-a;wendland;-f;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha;-V;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha;-r;90;-d;0;-Y;0.0 119: EXPECTED_ERRNO is 44/578 Test #38: rect-9 ................................ Passed 0.23 sec test 124 Start 124: landmark-warp-c 124: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=lm-warp;-a;gauss;-f;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha;-V;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha;-r;74;-d;0;-Y;1.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 124: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 124: Test timeout computed to be: 1500 52: RETVAL: 0 52: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha 52: 52: STDERR: 52: Not an error 45/578 Test #68: sphere-7 .............................. Passed 0.23 sec test 130 Start 130: plm-add-a 130: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=add;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 130: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 130: Test timeout computed to be: 1500 46/578 Test #52: rectarr-01-a .......................... Passed 0.25 sec test 133 Start 133: plm-add-b 133: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=average;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 133: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 133: Test timeout computed to be: 1500 4: RETVAL: 0 4: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd 4: Finished! 4: 4: STDERR: 4: Not an error 75: RETVAL: 0 75: STDOUT: Setting header 75: Origin = -243.4211 -243.4211 -243.4211 75: Size = 38 38 38 75: Spacing = 13.1579 13.1579 13.1579 75: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 75: Header was set 75: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha 75: 75: STDERR: 75: Not an error 47/578 Test #4: cyl-2 ................................. Passed 0.31 sec test 184 Start 184: plm-boundary-e 184: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=boundary;--boundary-behavior;edge-pad;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 184: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 184: Test timeout computed to be: 1500 48/578 Test #75: vf-radial-1 ........................... Passed 0.28 sec test 190 Start 190: plm-convert-dicom-b 190: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom;--metadata;0018,5100&equal&FFS" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 190: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 190: Test timeout computed to be: 1500 130: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 130: PARMS is add;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 130: EXPECTED_ERRNO is 124: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 124: PARMS is lm-warp;-a;gauss;-f;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha;-V;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha;-r;74;-d;0;-Y;1.0 124: EXPECTED_ERRNO is 6: RETVAL: 0 6: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd 6: Finished! 6: 6: STDERR: 6: Not an error 91: RETVAL: 0 91: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha 91: 91: STDERR: 91: Not an error 184: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 184: PARMS is boundary;--boundary-behavior;edge-pad;--boundary-type;interior-face;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-5.mha 184: EXPECTED_ERRNO is 49/578 Test #6: cyl-3 ................................. Passed 0.33 sec test 199 Start 199: plm-convert-dicom-donut-a 199: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 199: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 199: Test timeout computed to be: 1500 151: RETVAL: 0 151: STDOUT: Applying piece-wise linear transform... 151: done. 151: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd 151: Finished! 151: 151: STDERR: 151: Not an error 190: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 190: PARMS is convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom;--metadata;0018,5100&equal&FFS 190: EXPECTED_ERRNO is 50/578 Test #91: plm-diff-a ............................ Passed 0.30 sec 51/578 Test #151: plm-adjust-d .......................... Passed 0.29 sec 133: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 133: PARMS is average;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 133: EXPECTED_ERRNO is test 202 Start 202: plm-convert-dicom-donut-b 202: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd;--xor-contours" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 202: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 202: Test timeout computed to be: 1500 test 219 Start 219: plm-crop-c 219: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=crop;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c.mha;--structure;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 219: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 219: Test timeout computed to be: 1500 145: RETVAL: 0 145: STDOUT: Applying piece-wise linear transform... 145: done. 145: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd 145: Finished! 145: 145: STDERR: 145: Not an error 52/578 Test #145: plm-adjust-b .......................... Passed 0.31 sec 148: RETVAL: 0 148: STDOUT: Applying shift=100 and scale=1 ... done. 148: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd 148: Finished! 148: 148: STDERR: 199: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 199: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd 199: EXPECTED_ERRNO is test 256 Start 256: plm-fill-a 256: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-fill-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=fill;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 256: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 256: Test timeout computed to be: 1500 148: Not an error 154: RETVAL: 0 154: STDOUT: Applying shift=1000 and scale=2.5 ... done. 154: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd 154: Finished! 154: 154: STDERR: 154: Not an error 317: RETVAL: 0 317: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 317: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 317: Launching registration worker thread 317: Inside registration worker thread 317: Doing registration stage 317: [1] xf_in->m_type = 0, xf_out->m_type = 0 317: RESAMPLE 1 1: (2 2 2), (2 2 2) 317: RESAMPLE 1 1: (2 2 2), (2 2 2) 317: volume_calc_grad complete. 317: bspline_xform_initialize 317: rdims = (2,2,2) 317: vox_per_rgn = (11,11,11) 317: cdims = (5 5 5) 317: Algorithm flavor = h 317: Threading = 0 317: >> Checking JH allocation 317: BSPLINE PARMS 317: max_its = 5 317: max_feval = 5 317: BSPLINE XFORM HEADER 317: vox_per_rgn = 11 11 11 317: roi_offset = 0 0 0 317: roi_dim = 19 19 19 317: img_dc = 1 0 0 0 1 0 0 0 1 317: BST METRICS 317: MET 110100 MSE 1.000000 317: Setting nmax, mmax = 375 21 317: >>> START 317: This problem is unconstrained. 317: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.003 s ] 317: CMIN 0.00 CAVG 0.00 CMAX 0.00 317: LSD 0.00 317: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.003 s ] 317: CMIN -0.07 CAVG 0.01 CMAX 0.68 317: LSD 1.00 317: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.006 s ] 317: CMIN -0.35 CAVG 0.05 CMAX 3.40 317: LSD 5.00 317: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.002 s ] 317: CMIN -1.48 CAVG 0.20 CMAX 14.26 317: LSD 21.00 317: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.003 s ] 317: CMIN -1.74 CAVG 0.44 CMAX 32.50 317: LSD 27.95 317: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.003 s ] 317: CMIN -1.73 CAVG 0.34 CMAX 23.99 317: LSD 13.11 317: [2] xf_out->m_type = 9, xf_in->m_type = 0 317: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 317: bspline_xform_initialize 317: rdims = (2,2,2) 317: vox_per_rgn = (22,22,22) 317: cdims = (5 5 5) 317: ** Registration worker thread finished. 317: Writing transformation ... 317: Warping... 317: Running: plm_warp_native 317: Converting input image... 317: Converting xform... 317: bspline_xform_initialize 317: rdims = (2,2,2) 317: vox_per_rgn = (22,22,22) 317: cdims = (5 5 5) 317: Creating output vf... 317: Creating output volume... 317: Running native warper... 317: bspline_warp complete. 317: Back convert to original type... 317: > Convert vf to itk 317: > Conversion complete. 317: plm_warp_native is complete. 317: Saving image... 317: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-img.mha 317: Saving vf... 317: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-vf.mha 317: Load: 0.040417 317: Run: 0.030093 317: Save: 0.045733 317: Total: 0.116243 317: Finished! 317: 317: STDERR: 317: Not an error 53/578 Test #148: plm-adjust-c .......................... Passed 0.32 sec 54/578 Test #154: plm-adjust-e .......................... Passed 0.31 sec 55/578 Test #317: plm-bsp-mse-h ......................... Passed 0.38 sec test 259 Start 259: plm-mask-a 259: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-mask-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=mask;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--mask-value;-1000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 259: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 259: Test timeout computed to be: 1500 test 262 Start 262: plm-gamma-a 262: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--compute-full-region;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 262: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 262: Test timeout computed to be: 1500 202: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 202: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-dicom;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd;--xor-contours 202: EXPECTED_ERRNO is test 265 Start 265: plm-gamma-b 265: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 265: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 265: Test timeout computed to be: 1500 219: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 219: PARMS is crop;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c.mha;--structure;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-2.mha 219: EXPECTED_ERRNO is 160: RETVAL: 0 160: STDOUT: Computing statistics for linear match... 160: Adjusting image. shift = 0.289174; scale = 0.000314475 done. 160: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd 160: Finished! 160: 160: STDERR: 160: Not an error 58: RETVAL: 0 58: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha 58: 58: STDERR: 58: Not an error 56/578 Test #160: plm-adjust-g .......................... Passed 0.30 sec test 272 Start 272: plm-maximum-a 272: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-maximum-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=maximum;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 272: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 272: Test timeout computed to be: 1500 57/578 Test #58: rectarr-03 ............................ Passed 0.32 sec 178: RETVAL: 0 178: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd 178: 178: STDERR: 178: Not an error 58/578 Test #178: plm-boundary-c ........................ Passed 0.23 sec 175: RETVAL: 0 175: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd 175: 175: STDERR: 175: Not an error 94: RETVAL: 0 94: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha 94: 94: STDERR: 94: Not an error test 275 Start 275: plm-multiply-a 275: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=multiply;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 275: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 275: Test timeout computed to be: 1500 test 278 Start 278: plm-multiply-vf-a 278: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-vf-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=multiply;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 278: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 278: Test timeout computed to be: 1500 59: RETVAL: 0 59: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha 59: 59: STDERR: 59: Not an error 256: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 256: PARMS is fill;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha 256: EXPECTED_ERRNO is 59/578 Test #59: rectarr-04 ............................ Passed 0.33 sec 60/578 Test #94: plm-diff-b ............................ Passed 0.29 sec 61/578 Test #175: plm-boundary-b ........................ Passed 0.25 sec test 282 Start 282: plm-reg-align-center 282: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-align-center" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 282: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 282: Test timeout computed to be: 1500 test 288 Start 288: plm-reg-itk-rigid-a 288: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-rigid-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 288: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 288: Test timeout computed to be: 1500 test 293 Start 293: plm-reg-itk-similarity 293: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-similarity" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 293: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 293: Test timeout computed to be: 1500 285: RETVAL: 0 285: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 285: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 285: Launching registration worker thread 285: Inside registration worker thread 285: Doing registration stage 285: [1] xf_in->m_type = 0, xf_out->m_type = 0 285: Fixed image for this stage: 285: Dim = 19 19 19 285: Origin = -24.3421 -24.3421 -24.3421 285: Spacing = 2.63158 2.63158 2.63158 285: Direction Cosines = 285: 1 0 0 285: 0 1 0 285: 0 0 1 285: Moving image for this stage: 285: Dim = 19 19 19 285: Origin = -24.3421 -24.3421 -24.3421 285: Spacing = 2.63158 2.63158 2.63158 285: Direction Cosines = 285: 1 0 0 285: 0 1 0 285: 0 0 1 285: Initial Parameters = [0, 0, 0] 285: Starting ITK registration 285: StartEvent: [0, 0, 0] 285: MSE [ 0, 0,10.00] 18756.235 [9.999997615028182, -0.004883617032987085, -0.00488361703298731] 285: :: [0, 0, 0] 285: * 285: MSE [ 1, 1, 5.00] 1.116 [5.318441699151528, 1.2366948554205826, 1.2366948554205925] -18755.12 285: :: [9.999997615028182, -0.004883617032987085, -0.00488361703298731] 285: * 285: MSE [ 2, 2, 2.50] 5544.602 [7.610651940085832, 0.5310844064631247, 0.5310844064631272] 5543.49 285: MSE [ 3, 3, 2.50] 1453.699 [9.961460585442488, -0.07045474975050137, -0.07045474975050403] -4090.90 285: MSE [ 4, 4, 1.25] 4.252 [10.13062237366747, 0.8052975809356626, 0.8052975809356772] -1449.45 285: EndEvent: [10.13062237366747, 0.8052975809356626, 0.8052975809356772] 285: RegularStepGradientDescentOptimizer: Maximum number of iterations (5) exceeded. 285: ITK registration complete 285: [2] xf_out->m_type = 1, xf_in->m_type = 0 285: ** Registration worker thread finished. 285: Writing transformation ... 285: Warping... 285: plm_warp_itk: xform_to_itk_vf 285: plm_warp_itk: convert_to_itk 285: plm_warp_itk: warping... 285: Saving image... 285: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-img.mha 285: Saving vf... 285: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-vf.mha 285: Load: 0.065551 285: Run: 0.0789521 285: Save: 0.028578 285: Total: 0.173081 285: Finished! 285: 285: STDERR: 285: Not an error 62/578 Test #285: plm-reg-itk-translation ............... Passed 0.46 sec 259: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 259: PARMS is mask;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--mask-value;-1000 259: EXPECTED_ERRNO is 265: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 265: PARMS is gamma;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-13.mha 265: EXPECTED_ERRNO is 262: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 262: PARMS is gamma;--compute-full-region;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-12.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-14.mha 262: EXPECTED_ERRNO is 216: RETVAL: 0 216: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b.mha 216: 216: STDERR: 216: Not an error test 298 Start 298: plm-reg-itk-bspline 298: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-bspline" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 298: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 298: Test timeout computed to be: 1500 272: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 272: PARMS is maximum;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 272: EXPECTED_ERRNO is 163: RETVAL: 0 163: STDOUT: Computing statistics for linear match... 163: Time = 0.003120 seconds 163: Adjusting image. shift = 0.158838; scale = 0.000442518 done. 163: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd 163: Finished! 163: 163: STDERR: 163: Not an error 275: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 275: PARMS is multiply;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 275: EXPECTED_ERRNO is 172: RETVAL: 0 172: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd 172: 172: STDERR: 172: Not an error 278: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 278: PARMS is multiply;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha 278: EXPECTED_ERRNO is 210: RETVAL: 0 210: STDOUT: Setting PIH from DOSE 210: PIH is: 210: Origin = -243.4211 -243.4211 -243.4211 210: Size = 38 38 38 210: Spacing = 13.1579 13.1579 13.1579 210: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 210: Rt_study_warp: Saving dose image (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha) 210: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha 210: Rt_study_warp: warp and save ss. 210: Finished! 210: 210: STDERR: 210: Not an error 181: RETVAL: 0 181: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd 181: 181: STDERR: 181: Not an error 282: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 282: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center.txt 282: EXPECTED_ERRNO is 63/578 Test #163: plm-adjust-h .......................... Passed 0.35 sec 64/578 Test #216: plm-crop-b ............................ Passed 0.32 sec test 301 Start 301: plm-reg-itk-demons 301: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 301: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 301: Test timeout computed to be: 1500 test 311 Start 311: plm-bsp-mse-c 311: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 311: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 311: Test timeout computed to be: 1500 65/578 Test #172: plm-boundary-a ........................ Passed 0.31 sec 66/578 Test #210: plm-convert-dose-scale ................ Passed 0.35 sec 67/578 Test #181: plm-boundary-d ........................ Passed 0.28 sec test 314 Start 314: plm-bsp-mse-g 314: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 314: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 314: Test timeout computed to be: 1500 test 320 Start 320: plm-bsp-mse-i 320: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 320: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 320: Test timeout computed to be: 1500 test 323 Start 323: plm-bsp-mse-k 323: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-k" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 323: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 323: Test timeout computed to be: 1500 293: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 293: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity.txt 293: EXPECTED_ERRNO is 142: RETVAL: 0 142: STDOUT: Applying piece-wise linear transform... 142: done. 142: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd 142: Finished! 142: 142: STDERR: 142: Not an error 67: RETVAL: 0 67: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha 67: 67: STDERR: 67: Not an error 288: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 288: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a.txt 288: EXPECTED_ERRNO is 169: RETVAL: 0 169: STDOUT: Applying local intensity matching... 169: Time = 0.003207 seconds 169: Time = 0.002348 seconds 169: Time = 0.004596 seconds 169: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-shift.nrrd 169: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-scale.nrrd 169: done. 169: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd 169: Finished! 169: 169: STDERR: 169: Not an error 157: RETVAL: 0 157: STDOUT: Performing histogram matching... 157: done. 157: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd 157: Finished! 157: 157: STDERR: 157: Not an error 301: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 301: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.txt 301: EXPECTED_ERRNO is 298: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 298: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline.txt 298: EXPECTED_ERRNO is 311: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 311: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c.txt 311: EXPECTED_ERRNO is 68/578 Test #67: sphere-6 .............................. Passed 0.48 sec 69/578 Test #142: plm-adjust-a .......................... Passed 0.46 sec 70/578 Test #157: plm-adjust-f .......................... Passed 0.41 sec 71/578 Test #169: plm-adjust-j .......................... Passed 0.39 sec 314: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 314: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g.txt 314: EXPECTED_ERRNO is test 326 Start 326: plm-bsp-mse-l 326: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-l" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 326: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 326: Test timeout computed to be: 1500 test 337 Start 337: plm-bsp-mi-c 337: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 337: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 337: Test timeout computed to be: 1500 test 343 Start 343: plm-bsp-mi-k 343: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-k" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 343: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 343: Test timeout computed to be: 1500 test 346 Start 346: plm-bsp-gm-k 346: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-gm-k" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 346: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 346: Test timeout computed to be: 1500 323: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 323: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k.txt 323: EXPECTED_ERRNO is 166: RETVAL: 0 166: STDOUT: Applying local intensity matching... 166: Time = 0.003244 seconds 166: Time = 0.004823 seconds 166: Time = 0.004145 seconds 166: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-shift.nrrd 166: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-scale.nrrd 166: done. 166: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd 166: Finished! 166: 166: STDERR: 166: Not an error 139: RETVAL: 0 139: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd 139: 139: STDERR: 139: Not an error 320: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 320: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i.txt 320: EXPECTED_ERRNO is 326: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 326: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l.txt 326: EXPECTED_ERRNO is 72/578 Test #166: plm-adjust-i .......................... Passed 0.44 sec 73/578 Test #139: plm-add-vf-b .......................... Passed 0.40 sec 184: RETVAL: 0 184: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd 184: 184: STDERR: test 351 Start 351: plm-bsp-openmp 351: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-openmp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-bsp-openmp.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 351: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 351: Test timeout computed to be: 1500 test 358 Start 358: plm-bsp-ushort 358: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-ushort" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-bsp-ushort.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 358: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 358: Test timeout computed to be: 1500 184: Not an error 343: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 343: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k.txt 343: EXPECTED_ERRNO is 337: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 337: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c.txt 337: EXPECTED_ERRNO is 136: RETVAL: 0 136: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd 136: 136: STDERR: 136: Not an error 346: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 346: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k.txt 346: EXPECTED_ERRNO is 74/578 Test #184: plm-boundary-e ........................ Passed 0.24 sec test 361 Start 361: plm-bsp-double 361: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-double" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 361: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 361: Test timeout computed to be: 1500 75/578 Test #136: plm-add-vf-a .......................... Passed 0.45 sec test 365 Start 365: plm-bsp-char-output 365: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-char-output" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-bsp-char-output.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 365: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 365: Test timeout computed to be: 1500 213: RETVAL: 0 213: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a.mha 213: 213: STDERR: 213: Not an error 190: RETVAL: 0 190: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146089.1771237091.866238RTDOSE 190: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146089.1771237091.866239RTSTRUCT 190: Found DCM_ReferencedFrameOfReferenceSequence! 190: Found DCM_RTReferencedStudySequence! 190: Trying to load rt dose. 190: Load: DoseGridScaling = 0.000000 190: RTDOSE: dim = 38 38 38 190: ipp = -243.421005 -243.421005 -243.421005 190: spc = 13.157900 13.157900 13.157900 190: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 190: Bits_alloc: 32 190: Bits_stored: 32 190: High_bit: 31 190: Pixel_rep: 0 190: rc = 1, length = 109744, npix = 54872 190: Trying to load rt structure set. 190: Adding structure (1), Foreground 190: Structure 1 has color 255\0\0 190: Setting PIH from RDD 190: PIH is: 190: Origin = -243.4211 -243.4211 -243.4211 190: Size = 38 38 38 190: Spacing = 13.1579 13.1579 13.1579 190: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 190: Rt_study_warp: Convert ss_img to cxt. 190: Rt_study_warp: Apply dicom_dir. 190: Rt_study_warp: Set geometry from PIH. 190: Rt_study_warp: Set rasterization geometry. 190: rast_dim = 512 512 7 190: rast_offset = -55.2632 -55.2632 -46.0526 190: rast_spacing = 0.215872 0.215872 13.1579 190: Rt_study_warp: warp and save ss. 190: Warp_and_save_ss: save_ss_img 190: Rt_study_warp: Save dicom. 190: Keyholizing structure 0. 190: Write: DoseGridScaling = 0.000000 190: Finished! 190: 190: STDERR: 190: Not an error 76/578 Test #213: plm-crop-a ............................ Passed 0.45 sec 358: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 358: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-bsp-ushort.txt 358: EXPECTED_ERRNO is test 369 Start 369: plm-bsp-regularize-none 369: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-none" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 369: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 369: Test timeout computed to be: 1500 365: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 365: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-bsp-char-output.txt 365: EXPECTED_ERRNO is 77/578 Test #190: plm-convert-dicom-b ................... Passed 0.27 sec test 372 Start 372: plm-bsp-regularize-analytic 372: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-analytic" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 372: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 372: Test timeout computed to be: 1500 361: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 361: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double.txt 361: EXPECTED_ERRNO is 372: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 372: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic.txt 372: EXPECTED_ERRNO is 130: RETVAL: 0 130: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd 130: 130: STDERR: 351: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 351: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-bsp-openmp.txt 351: EXPECTED_ERRNO is 130: Not an error 187: RETVAL: 0 187: STDOUT: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146089.1771237091.866239RTSTRUCT 187: Found DCM_ReferencedFrameOfReferenceSequence! 187: Found DCM_RTReferencedStudySequence! 187: Trying to load rt structure set. 187: Adding structure (1), Foreground 78/578 Test #130: plm-add-a ............................. Passed 0.35 sec 187: Structure 1 has color 255\0\0 187: Setting PIH from rasterization heuristicsPIH is: 187: Origin = -55.2632 -55.2632 -46.0526 187: Size = 512 512 7 187: Spacing = 0.2159 0.2159 13.1579 187: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 187: Rt_study_warp: Convert ss_img to cxt. 187: Rt_study_warp: Apply dicom_dir. 187: Rt_study_warp: Set geometry from PIH. 187: Rt_study_warp: Set rasterization geometry. 187: rast_dim = 512 512 7 187: rast_offset = -55.2632 -55.2632 -46.0526 187: rast_spacing = 0.215872 0.215872 13.1579 187: Rt_study_warp: warp and save ss. 187: Warp_and_save_ss: seg->rasterize 187: Rasterizing... 187: Converting... 187: Finished rasterization. 187: Warp_and_save_ss: save_ss_img 187: save_ss_img: save_ss_image 187: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha 187: save_ss_img: save_ss_list 187: Done. 187: save_ss_img: save_prefix 187: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-prefix/Foreground.mha 187: save_ss_img: save_cxt 187: Finished! 187: 187: STDERR: 187: Not an error test 375 Start 375: plm-bsp-regularize-numeric 375: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-numeric" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 375: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 375: Test timeout computed to be: 1500 369: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 369: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none.txt 369: EXPECTED_ERRNO is 124: RETVAL: 0 124: STDOUT: 74.000000 124: 74.000000 124: 74.000000 124: 74.000000 124: 74.000000 124: 74.000000 124: 74.000000 124: 74.000000 124: coeff 0 -14.4830 0.0226 -0.0000 124: coeff 1 -6.4591 0.0989 0.0000 124: coeff 2 -5.6641 0.8767 0.0000 124: coeff 3 -15.5832 -0.6135 0.0000 124: coeff 4 -15.3769 -0.1107 0.0000 124: coeff 5 -6.4169 1.0717 -0.0000 124: coeff 6 -6.5309 -0.1220 0.0000 124: coeff 7 -16.0092 -0.1893 -0.0000 124: Creating output vf 124: Rendering vector field 124: Gauss RBF, updating the vector field 124: Converting volume to float 124: Creating output vol 124: Warping image 124: Direction cosines: vin = 1.000000 0.000000 0.000000 ... 124: vf = 1.000000 0.000000 0.000000 ... 124: spac: vin = 13.157895 13.157895 13.157895 ... 124: vf = 13.157895 13.157895 13.157895 ... 124: proj: vin = 0.076000 -0.000000 0.000000 ... 124: vf = 0.076000 -0.000000 0.000000 ... 124: step: vin = 13.157895 0.000000 0.000000 ... 124: vf = 13.157895 0.000000 0.000000 ... 124: Freeing coeff 124: Done with rbf_gauss_warp 124: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha 124: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha 124: 124: STDERR: 124: Not an error 133: RETVAL: 0 133: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd 133: 133: STDERR: 133: Not an error 79/578 Test #187: plm-convert-dicom-a ................... Passed 0.46 sec test 206 Start 206: plm-convert-cxt 206: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-cxt" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha;--output-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 206: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 206: Test timeout computed to be: 1500 119: RETVAL: 0 119: STDOUT: 180.000000 119: 180.000000 119: 180.000000 119: 180.000000 119: 180.000000 119: 180.000000 119: 180.000000 119: 180.000000 119: coeff 0 -18.4133 0.0962 0.0000 119: coeff 1 -7.5271 -0.0286 0.0000 119: coeff 2 -6.1678 1.3625 -0.0000 119: coeff 3 -20.1368 -0.9723 0.0000 119: coeff 4 -19.7774 -0.2570 -0.0000 119: coeff 5 -7.3050 1.5884 0.0000 119: coeff 6 -7.4759 -0.3261 -0.0000 119: coeff 7 -20.6523 -0.1769 -0.0000 119: Creating output vf 119: Rendering vector field 119: Wendland RBF, updating the vector field 119: Converting volume to float 119: Creating output vol 119: Warping image 119: Direction cosines: vin = 1.000000 0.000000 0.000000 ... 119: vf = 1.000000 0.000000 0.000000 ... 119: spac: vin = 13.157895 13.157895 13.157895 ... 119: vf = 13.157895 13.157895 13.157895 ... 119: proj: vin = 0.076000 -0.000000 0.000000 ... 119: vf = 0.076000 -0.000000 0.000000 ... 119: step: vin = 13.157895 0.000000 0.000000 ... 119: vf = 13.157895 0.000000 0.000000 ... 119: Freeing coeff 119: Done with rbf_wendland_warp 119: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha 119: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha 119: 119: STDERR: 119: Not an error 80/578 Test #124: landmark-warp-c ....................... Passed 0.39 sec 81/578 Test #133: plm-add-b ............................. Passed 0.36 sec test 379 Start 379: plm-bsp-landmark-b 379: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 379: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 379: Test timeout computed to be: 1500 test 382 Start 382: plm-bsp-landmark-c 382: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 382: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 382: Test timeout computed to be: 1500 82/578 Test #119: landmark-warp-b ....................... Passed 0.45 sec 114: RETVAL: 0 test 385 Start 385: plm-bsp-landmark-d 385: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 385: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 385: Test timeout computed to be: 1500 114: STDOUT: Hello world 114: Gonna convert pointsets 114: Pointset: 114: rect-2-0 -26.271700 -52.162899 46.052799 114: rect-2-1 65.870201 -52.543598 46.053001 114: rect-2-2 65.870201 52.543900 46.053001 114: rect-2-3 -25.510201 53.686199 46.053001 114: rect-2-4 -25.891001 -52.162899 -46.052502 114: rect-2-5 66.631699 -53.305099 -46.053001 114: rect-2-6 65.870201 53.305401 -46.053001 114: rect-2-7 -25.129499 53.686199 -46.053001 114: Conversion complete. 114: -26.2717 -52.1629 46.0528 114: 65.8702 -52.5436 46.053 114: 65.8702 52.5439 46.053 114: -25.5102 53.6862 46.053 114: -25.891 -52.1629 -46.0525 114: 66.6317 -53.3051 -46.053 114: 65.8702 53.3054 -46.053 114: -25.1295 53.6862 -46.053 114: Setting landmarks to TPS 114: Computing matrix 114: Setting xform 114: Converting to VF 114: Warping... 114: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha 114: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha 114: 114: STDERR: 114: Not an error 375: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 375: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric.txt 375: EXPECTED_ERRNO is 379: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 379: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b.txt 379: EXPECTED_ERRNO is 206: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 206: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a.cxt;--output-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha;--output-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.txt 206: EXPECTED_ERRNO is 83/578 Test #114: landmark-warp-a ....................... Passed 0.48 sec test 388 Start 388: plm-bsp-landmark-e 388: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 388: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 388: Test timeout computed to be: 1500 265: RETVAL: 0 265: STDOUT: Gamma dose max is 10.000000 265: Time = 0.003850 seconds 265: Gamma calculation is under progress... 265: analysis threshold = 1.00 Gy 265: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha 265: Pass rate = 0.000000 % 265: 265: STDERR: 265: Not an error 382: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 382: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c.txt 382: EXPECTED_ERRNO is 385: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 385: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d.txt 385: EXPECTED_ERRNO is 84/578 Test #265: plm-gamma-b ........................... Passed 0.31 sec test 391 Start 391: plm-bsp-dcos-a 391: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 391: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 391: Test timeout computed to be: 1500 278: RETVAL: 0 278: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd 278: 278: STDERR: 278: Not an error 282: RETVAL: 0 282: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 282: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-6.mha 282: Launching registration worker thread 282: Inside registration worker thread 282: Doing registration stage 282: [1] xf_in->m_type = 0, xf_out->m_type = 0 282: [2] xf_out->m_type = 1, xf_in->m_type = 0 282: ** Registration worker thread finished. 282: Writing transformation ... 282: Warping... 282: plm_warp_itk: xform_to_itk_vf 282: plm_warp_itk: convert_to_itk 282: plm_warp_itk: warping... 282: Saving image... 282: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-img.mha 282: Load: 0.0693059 282: Run: 0.00082016 282: Save: 0.0106571 282: Total: 0.0807831 282: Finished! 282: 282: STDERR: 282: Not an error 388: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 388: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e.txt 388: EXPECTED_ERRNO is 85/578 Test #278: plm-multiply-vf-a ..................... Passed 0.29 sec 86/578 Test #282: plm-reg-align-center .................. Passed 0.29 sec 219: RETVAL: 0 219: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c.mha 219: 219: STDERR: 219: Not an error test 394 Start 394: plm-bsp-dcos-b 394: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 394: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 394: Test timeout computed to be: 1500 test 397 Start 397: plm-bsp-dcos-c 397: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 397: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 397: Test timeout computed to be: 1500 259: RETVAL: 0 259: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha 259: Finished! 259: 259: STDERR: 259: Not an error 272: RETVAL: 0 272: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd 272: 272: STDERR: 272: Not an error 202: RETVAL: 0 202: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146105.1771237091.871567RTDOSE 202: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146105.1771237091.871568RTSTRUCT 202: Found DCM_ReferencedFrameOfReferenceSequence! 202: Found DCM_RTReferencedStudySequence! 202: Trying to load rt dose. 202: Load: DoseGridScaling = 0.000000 202: RTDOSE: dim = 38 38 38 202: ipp = -25.000000 -25.000000 -25.000000 202: spc = 1.315790 1.315790 1.315790 202: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 202: Bits_alloc: 32 202: Bits_stored: 32 202: High_bit: 31 202: Pixel_rep: 0 202: rc = 1, length = 109744, npix = 54872 202: Trying to load rt structure set. 202: Adding structure (1), Foreground 202: Structure 1 has color 255\0\0 202: Setting PIH from RDD 202: PIH is: 202: Origin = -25.0000 -25.0000 -25.0000 202: Size = 38 38 38 202: Spacing = 1.3158 1.3158 1.3158 202: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 202: Rt_study_warp: Convert ss_img to cxt. 202: Rt_study_warp: Apply dicom_dir. 202: Rt_study_warp: Set geometry from PIH. 202: Rt_study_warp: Set rasterization geometry. 202: rast_dim = 512 512 14 202: rast_offset = -10.3618 -10.3618 -9.21053 202: rast_spacing = 0.0404759 0.0404759 1.31579 202: Rt_study_warp: warp and save ss. 202: Warp_and_save_ss: seg->rasterize 202: Rasterizing... 202: Converting... 202: Finished rasterization. 202: Warp_and_save_ss: save_ss_img 202: save_ss_img: save_ss_image 202: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd 202: Finished! 202: 202: STDERR: 202: Not an error 87/578 Test #219: plm-crop-c ............................ Passed 0.36 sec test 400 Start 400: plm-bsp-dcos-d 400: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 400: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 400: Test timeout computed to be: 1500 88/578 Test #202: plm-convert-dicom-donut-b ............. Passed 0.38 sec 89/578 Test #259: plm-mask-a ............................ Passed 0.35 sec test 403 Start 403: plm-bsp-dcos-e 403: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 403: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 403: Test timeout computed to be: 1500 test 406 Start 406: plm-bsp-dcos-f 406: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 406: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 406: Test timeout computed to be: 1500 90/578 Test #272: plm-maximum-a ......................... Passed 0.35 sec 391: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 391: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a.txt 391: EXPECTED_ERRNO is test 409 Start 409: plm-reg-multi-a 409: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 409: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 409: Test timeout computed to be: 1500 394: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 394: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b.txt 394: EXPECTED_ERRNO is 397: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 397: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c.txt 397: EXPECTED_ERRNO is 275: RETVAL: 0 275: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd 275: 275: STDERR: 275: Not an error 400: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 400: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d.txt 400: EXPECTED_ERRNO is 91/578 Test #275: plm-multiply-a ........................ Passed 0.34 sec test 412 Start 412: plm-reg-multi-b 412: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 412: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 412: Test timeout computed to be: 1500 403: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 403: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e.txt 403: EXPECTED_ERRNO is 199: RETVAL: 0 199: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146105.1771237091.871567RTDOSE 199: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146105.1771237091.871568RTSTRUCT 199: Found DCM_ReferencedFrameOfReferenceSequence! 199: Found DCM_RTReferencedStudySequence! 199: Trying to load rt dose. 199: Load: DoseGridScaling = 0.000000 199: RTDOSE: dim = 38 38 38 199: ipp = -25.000000 -25.000000 -25.000000 199: spc = 1.315790 1.315790 1.315790 199: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 199: Bits_alloc: 32 199: Bits_stored: 32 199: High_bit: 31 199: Pixel_rep: 0 199: rc = 1, length = 109744, npix = 54872 199: Trying to load rt structure set. 199: Adding structure (1), Foreground 199: Structure 1 has color 255\0\0 199: Setting PIH from RDD 199: PIH is: 199: Origin = -25.0000 -25.0000 -25.0000 199: Size = 38 38 38 199: Spacing = 1.3158 1.3158 1.3158 199: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 199: Rt_study_warp: Convert ss_img to cxt. 199: Rt_study_warp: Apply dicom_dir. 199: Rt_study_warp: Set geometry from PIH. 199: Rt_study_warp: Set rasterization geometry. 199: rast_dim = 512 512 14 199: rast_offset = -10.3618 -10.3618 -9.21053 199: rast_spacing = 0.0404759 0.0404759 1.31579 199: Rt_study_warp: warp and save ss. 199: Warp_and_save_ss: seg->rasterize 199: Rasterizing... 199: Converting... 199: Finished rasterization. 199: Warp_and_save_ss: save_ss_img 199: save_ss_img: save_ss_image 199: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd 199: Finished! 199: 199: STDERR: 199: Not an error 92/578 Test #199: plm-convert-dicom-donut-a ............. Passed 0.44 sec test 415 Start 415: plm-reg-dv-itk-translation 415: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-dv-itk-translation" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 415: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 415: Test timeout computed to be: 1500 409: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 409: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a.txt 409: EXPECTED_ERRNO is 412: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 412: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b.txt 412: EXPECTED_ERRNO is 256: RETVAL: 0 256: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha 256: Finished! 256: 256: STDERR: 256: Not an error 406: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 406: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f.txt 406: EXPECTED_ERRNO is 262: RETVAL: 0 262: STDOUT: Gamma dose max is 10.000000 262: Time = 0.003063 seconds 262: Gamma calculation is under progress... 262: analysis threshold = 1.00 Gy 262: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha 262: Pass rate = 100.000000 % 262: 262: STDERR: 93/578 Test #256: plm-fill-a ............................ Passed 0.44 sec 262: Not an error test 424 Start 424: plm-reg-process-a 424: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-process-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 424: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 424: Test timeout computed to be: 1500 415: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 415: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation.txt 415: EXPECTED_ERRNO is 94/578 Test #262: plm-gamma-a ........................... Passed 0.44 sec test 427 Start 427: plm-reg-trans-a 427: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 427: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 427: Test timeout computed to be: 1500 424: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 424: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.txt 424: EXPECTED_ERRNO is 427: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 427: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.txt 427: EXPECTED_ERRNO is 311: RETVAL: 0 311: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 311: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 311: Launching registration worker thread 311: Inside registration worker thread 311: Doing registration stage 311: [1] xf_in->m_type = 0, xf_out->m_type = 0 311: RESAMPLE 1 1: (2 2 2), (2 2 2) 311: RESAMPLE 1 1: (2 2 2), (2 2 2) 311: volume_calc_grad complete. 311: bspline_xform_initialize 311: rdims = (2,2,2) 311: vox_per_rgn = (11,11,11) 311: cdims = (5 5 5) 311: Algorithm flavor = c 311: Threading = 0 311: >> Checking JH allocation 311: BSPLINE PARMS 311: max_its = 5 311: max_feval = 5 311: BSPLINE XFORM HEADER 311: vox_per_rgn = 11 11 11 311: roi_offset = 0 0 0 311: roi_dim = 19 19 19 311: img_dc = 1 0 0 0 1 0 0 0 1 311: BST METRICS 311: MET 110100 MSE 1.000000 311: Setting nmax, mmax = 375 21 311: >>> START 311: This problem is unconstrained. 311: [ 0, 0] MSE 18756.248 NV 6859 GM -2980.062 GN 852 [ 0.004 s ] 311: CMIN 0.00 CAVG 0.00 CMAX 0.00 311: LSD 0.00 311: [ 0, 1] MSE 17838.643 NV 6859 GM -2882.390 GN 824 [ 0.006 s ] 311: CMIN -0.07 CAVG 0.01 CMAX 0.68 311: LSD 1.00 311: [ 0, 2] MSE 14464.868 NV 6858 GM -2822.145 GN 824 [ 0.004 s ] 311: CMIN -0.35 CAVG 0.05 CMAX 3.40 311: LSD 5.00 311: [ 0, 3] MSE 3829.069 NV 6286 GM -1585.570 GN 459 [ 0.006 s ] 311: CMIN -1.48 CAVG 0.20 CMAX 14.26 311: LSD 21.00 311: [ 1, 4] MSE 3098.610 NV 5455 GM 1176.112 GN 399 [ 0.003 s ] 311: CMIN -1.74 CAVG 0.44 CMAX 32.50 311: LSD 27.95 311: [ 2, 5] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.004 s ] 311: CMIN -1.73 CAVG 0.34 CMAX 23.99 311: LSD 13.11 311: [2] xf_out->m_type = 9, xf_in->m_type = 0 311: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 311: bspline_xform_initialize 311: rdims = (2,2,2) 311: vox_per_rgn = (22,22,22) 311: cdims = (5 5 5) 311: ** Registration worker thread finished. 311: Writing transformation ... 311: Warping... 311: Running: plm_warp_native 311: Converting input image... 311: Converting xform... 311: bspline_xform_initialize 311: rdims = (2,2,2) 311: vox_per_rgn = (22,22,22) 311: cdims = (5 5 5) 311: Creating output vf... 311: Creating output volume... 311: Running native warper... 311: bspline_warp complete. 311: Back convert to original type... 311: > Convert vf to itk 311: > Conversion complete. 311: plm_warp_native is complete. 311: Saving image... 311: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-img.mha 311: Saving vf... 311: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-vf.mha 311: Load: 0.0537412 311: Run: 0.0380268 311: Save: 0.0423322 311: Total: 0.1341 311: Finished! 311: 311: STDERR: 311: Not an error 95/578 Test #311: plm-bsp-mse-c ......................... Passed 0.41 sec test 430 Start 430: plm-reg-trans-b 430: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 430: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 430: Test timeout computed to be: 1500 430: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 430: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.txt 430: EXPECTED_ERRNO is 323: RETVAL: 0 323: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 323: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 323: Launching registration worker thread 323: Inside registration worker thread 323: Doing registration stage 323: [1] xf_in->m_type = 0, xf_out->m_type = 0 323: RESAMPLE 1 1: (2 2 2), (2 2 2) 323: RESAMPLE 1 1: (2 2 2), (2 2 2) 323: volume_calc_grad complete. 323: bspline_xform_initialize 323: rdims = (2,2,2) 323: vox_per_rgn = (11,11,11) 323: cdims = (5 5 5) 323: Algorithm flavor = k 323: Threading = 0 323: >> Checking JH allocation 323: BSPLINE PARMS 323: max_its = 5 323: max_feval = 5 323: BSPLINE XFORM HEADER 323: vox_per_rgn = 11 11 11 323: roi_offset = 0 0 0 323: roi_dim = 19 19 19 323: img_dc = 1 0 0 0 1 0 0 0 1 323: BST METRICS 323: MET 110100 MSE 1.000000 323: Setting nmax, mmax = 375 21 323: >>> START 323: This problem is unconstrained. 323: [ 0, 0] MSE 18756.248 NV 6859 GM -2980.062 GN 852 [ 0.012 s ] 323: CMIN 0.00 CAVG 0.00 CMAX 0.00 323: LSD 0.00 323: [ 0, 1] MSE 17838.643 NV 6859 GM -2882.390 GN 824 [ 0.008 s ] 323: CMIN -0.07 CAVG 0.01 CMAX 0.68 323: LSD 1.00 323: [ 0, 2] MSE 14464.868 NV 6858 GM -2822.145 GN 824 [ 0.010 s ] 323: CMIN -0.35 CAVG 0.05 CMAX 3.40 323: LSD 5.00 323: [ 0, 3] MSE 3829.069 NV 6286 GM -1585.570 GN 459 [ 0.007 s ] 323: CMIN -1.48 CAVG 0.20 CMAX 14.26 323: LSD 21.00 323: [ 1, 4] MSE 3098.610 NV 5455 GM 1176.112 GN 399 [ 0.004 s ] 323: CMIN -1.74 CAVG 0.44 CMAX 32.50 323: LSD 27.95 323: [ 2, 5] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.005 s ] 323: CMIN -1.73 CAVG 0.34 CMAX 23.99 323: LSD 13.11 323: [2] xf_out->m_type = 9, xf_in->m_type = 0 323: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 323: bspline_xform_initialize 323: rdims = (2,2,2) 323: vox_per_rgn = (22,22,22) 323: cdims = (5 5 5) 323: ** Registration worker thread finished. 323: Writing transformation ... 323: Warping... 323: Running: plm_warp_native 323: Converting input image... 323: Converting xform... 323: bspline_xform_initialize 323: rdims = (2,2,2) 323: vox_per_rgn = (22,22,22) 323: cdims = (5 5 5) 323: Creating output vf... 323: Creating output volume... 323: Running native warper... 323: bspline_warp complete. 323: Back convert to original type... 323: > Convert vf to itk 323: > Conversion complete. 323: plm_warp_native is complete. 323: Saving image... 323: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-img.mha 323: Saving vf... 323: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-vf.mha 323: Load: 0.0507779 323: Run: 0.0553792 323: Save: 0.0809569 323: Total: 0.187114 323: Finished! 323: 323: STDERR: 323: Not an error 96/578 Test #323: plm-bsp-mse-k ......................... Passed 0.44 sec test 433 Start 433: plm-reg-trans-mi-a 433: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-mi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 433: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 433: Test timeout computed to be: 1500 443: RETVAL: 0 443: STDOUT: Loading fixed image [0]: gauss-2.mha 443: Loading moving image [0]: gauss-5.mha 443: Launching registration worker thread 443: Inside registration worker thread 443: Doing registration stage 443: [1] xf_in->m_type = 0, xf_out->m_type = 0 443: RESAMPLE 1 1: (2 2 2), (2 2 2) 443: RESAMPLE 1 1: (2 2 2), (2 2 2) 443: volume_calc_grad complete. 443: bspline_xform_initialize 443: rdims = (2,2,2) 443: vox_per_rgn = (11,11,11) 443: cdims = (5 5 5) 443: Algorithm flavor = g 443: Threading = 0 443: >> Checking JH allocation 443: BSPLINE PARMS 443: max_its = 10 443: max_feval = 10 443: BSPLINE XFORM HEADER 443: vox_per_rgn = 11 11 11 443: roi_offset = 0 0 0 443: roi_dim = 19 19 19 443: img_dc = 1 0 0 0 1 0 0 0 1 443: BST METRICS 443: MET 110100 MSE 1.000000 443: Setting nmax, mmax = 375 21 443: >>> START 443: This problem is unconstrained. 443: [ 0, 0] MSE 13049.518 NV 6859 GM -1702.194 GN 529 [ 0.030 s ] 443: CMIN 0.00 CAVG 0.00 CMAX 0.00 443: LSD 0.00 443: [ 0, 1] MSE 12469.547 NV 6859 GM -1637.952 GN 509 [ 0.026 s ] 443: CMIN -0.05 CAVG 0.01 CMAX 0.74 443: LSD 1.00 443: [ 0, 2] MSE 10357.764 NV 6859 GM -1646.825 GN 515 [ 0.085 s ] 443: CMIN -0.26 CAVG 0.04 CMAX 3.71 443: LSD 5.00 443: [ 0, 3] MSE 1944.747 NV 6295 GM -809.887 GN 247 [ 0.046 s ] 443: CMIN -1.11 CAVG 0.18 CMAX 15.56 443: LSD 21.00 443: [ 1, 4] MSE 891.268 NV 5678 GM 504.524 GN 187 [ 0.037 s ] 443: CMIN -1.50 CAVG 0.35 CMAX 29.17 443: LSD 19.59 443: [ 2, 5] MSE 117.931 NV 5939 GM -11.010 GN 12.8 [ 0.060 s ] 443: CMIN -1.27 CAVG 0.29 CMAX 23.54 443: LSD 8.47 443: [ 3, 6] MSE 110.217 NV 5931 GM -24.361 GN 9.26 [ 0.078 s ] 443: CMIN -1.44 CAVG 0.29 CMAX 23.60 443: LSD 0.55 443: [ 4, 7] MSE 101.235 NV 5928 GM -14.715 GN 10.7 [ 0.044 s ] 443: CMIN -1.88 CAVG 0.29 CMAX 23.41 443: LSD 1.34 443: [ 5, 8] MSE 89.096 NV 5930 GM -23.801 GN 14.1 [ 0.059 s ] 443: CMIN -2.79 CAVG 0.31 CMAX 22.44 443: LSD 2.74 443: [ 6, 9] MSE 76.413 NV 5947 GM 60.289 GN 16.9 [ 0.057 s ] 443: CMIN -4.30 CAVG 0.34 CMAX 20.28 443: LSD 5.25 443: [ 7, 10] MSE 68.670 NV 5976 GM -50.552 GN 14.5 [ 0.032 s ] 443: CMIN -6.00 CAVG 0.36 CMAX 17.22 443: LSD 5.96 443: [2] xf_out->m_type = 9, xf_in->m_type = 0 443: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 443: bspline_xform_initialize 443: rdims = (2,2,2) 443: vox_per_rgn = (22,22,22) 443: cdims = (5 5 5) 443: ** Registration worker thread finished. 443: Writing transformation ... 443: Warping... 443: Running: plm_warp_native 443: Converting input image... 443: Converting xform... 443: bspline_xform_initialize 443: rdims = (2,2,2) 443: vox_per_rgn = (22,22,22) 443: cdims = (5 5 5) 443: Creating output vf... 443: Creating output volume... 443: Running native warper... 443: bspline_warp complete. 443: Back convert to original type... 443: > Convert vf to itk 443: > Conversion complete. 443: plm_warp_native is complete. 443: Saving image... 443: Trying to write image to plm-reg-compose-img.mha 443: Saving vf... 443: Trying to write image to plm-reg-compose-vf.mha 443: Load: 0.0588 443: Run: 0.569562 443: Save: 0.082 443: Total: 0.710362 443: Finished! 443: 443: STDERR: 443: Not an error 433: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 433: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.txt 433: EXPECTED_ERRNO is 97/578 Test #443: plm-reg-compose ....................... Passed 0.97 sec test 436 Start 436: plm-reg-autores-a 436: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 436: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 436: Test timeout computed to be: 1500 436: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 436: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.txt 436: EXPECTED_ERRNO is 365: RETVAL: 0 365: STDOUT: Loading fixed image [0]: rect-2.mha 365: Loading moving image [0]: rect-3.mha 365: Launching registration worker thread 365: Inside registration worker thread 365: Doing registration stage 365: [1] xf_in->m_type = 0, xf_out->m_type = 0 365: RESAMPLE 1 1: (2 2 2), (2 2 2) 365: RESAMPLE 1 1: (2 2 2), (2 2 2) 365: volume_calc_grad complete. 365: bspline_xform_initialize 365: Warning: vox_per_rgn was less than 4. 365: Warning: vox_per_rgn was less than 4. 365: Warning: vox_per_rgn was less than 4. 365: rdims = (5,5,5) 365: vox_per_rgn = (4,4,4) 365: cdims = (8 8 8) 365: Algorithm flavor = h 365: Threading = 0 365: >> Checking JH allocation 365: BSPLINE PARMS 365: max_its = 5 365: max_feval = 5 365: BSPLINE XFORM HEADER 365: vox_per_rgn = 4 4 4 365: roi_offset = 0 0 0 365: roi_dim = 19 19 19 365: img_dc = 1 0 0 0 1 0 0 0 1 365: BST METRICS 365: MET 110100 MSE 1.000000 365: Setting nmax, mmax = 1536 41 365: >>> START 365: This problem is unconstrained. 365: [ 0, 0] MSE 1339.481 NV 6859 GM 84.834 GN 23.1 [ 0.004 s ] 365: CMIN 0.00 CAVG 0.00 CMAX 0.00 365: LSD 0.00 365: [ 0, 1] MSE 1311.345 NV 6859 GM 83.820 GN 22.8 [ 0.004 s ] 365: CMIN -0.60 CAVG -0.00 CMAX 0.08 365: LSD 1.00 365: [ 0, 2] MSE 1202.580 NV 6859 GM 79.773 GN 21.8 [ 0.004 s ] 365: CMIN -2.99 CAVG -0.01 CMAX 0.42 365: LSD 5.00 365: [ 0, 3] MSE 827.300 NV 6859 GM 63.686 GN 17.5 [ 0.004 s ] 365: CMIN -12.56 CAVG -0.05 CMAX 1.74 365: LSD 21.00 365: [ 1, 4] MSE 213.043 NV 6859 GM -16.873 GN 5.84 [ 0.007 s ] 365: CMIN -54.37 CAVG -0.20 CMAX 6.52 365: LSD 67.10 365: [ 2, 5] MSE 175.936 NV 6859 GM -0.450 GN 2.34 [ 0.004 s ] 365: CMIN -51.91 CAVG -0.18 CMAX 5.91 365: LSD 13.48 365: [2] xf_out->m_type = 9, xf_in->m_type = 0 365: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 365: bspline_xform_initialize 365: rdims = (5,5,5) 365: vox_per_rgn = (8,8,8) 365: cdims = (8 8 8) 365: Warping... 365: Running: plm_warp_native 365: Converting input image... 365: Converting xform... 365: bspline_xform_initialize 365: rdims = (5,5,5) 365: vox_per_rgn = (8,8,8) 365: cdims = (8 8 8) 365: ** Registration worker thread finished. 365: Creating output volume... 365: Running native warper... 365: bspline_warp complete. 365: Back convert to original type... 365: plm_warp_native is complete. 365: Saving image... 365: Trying to write image to plm-bsp-char-output.mha 365: Load: 0.0870671 365: Run: 0.0457339 365: Save: 0.0567501 365: Total: 0.189551 365: Finished! 365: 365: STDERR: 365: Not an error 98/578 Test #365: plm-bsp-char-output ................... Passed 0.51 sec test 439 Start 439: plm-reg-autores-b 439: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 439: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 439: Test timeout computed to be: 1500 439: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 439: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.txt 439: EXPECTED_ERRNO is 326: RETVAL: 0 326: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 326: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 326: Launching registration worker thread 326: Inside registration worker thread 326: Doing registration stage 326: [1] xf_in->m_type = 0, xf_out->m_type = 0 326: RESAMPLE 1 1: (2 2 2), (2 2 2) 326: RESAMPLE 1 1: (2 2 2), (2 2 2) 326: volume_calc_grad complete. 326: bspline_xform_initialize 326: rdims = (2,2,2) 326: vox_per_rgn = (11,11,11) 326: cdims = (5 5 5) 326: Algorithm flavor = l 326: Threading = 0 326: >> Checking JH allocation 326: BSPLINE PARMS 326: max_its = 5 326: max_feval = 5 326: BSPLINE XFORM HEADER 326: vox_per_rgn = 11 11 11 326: roi_offset = 0 0 0 326: roi_dim = 19 19 19 326: img_dc = 1 0 0 0 1 0 0 0 1 326: BST METRICS 326: MET 110100 MSE 1.000000 326: Setting nmax, mmax = 375 21 326: >>> START 326: This problem is unconstrained. 326: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.007 s ] 326: CMIN 0.00 CAVG 0.00 CMAX 0.00 326: LSD 0.00 326: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.010 s ] 326: CMIN -0.07 CAVG 0.01 CMAX 0.68 326: LSD 1.00 326: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.006 s ] 326: CMIN -0.35 CAVG 0.05 CMAX 3.40 326: LSD 5.00 326: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.006 s ] 326: CMIN -1.48 CAVG 0.20 CMAX 14.26 326: LSD 21.00 326: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.004 s ] 326: CMIN -1.74 CAVG 0.44 CMAX 32.50 326: LSD 27.95 326: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.004 s ] 326: CMIN -1.73 CAVG 0.34 CMAX 23.99 326: LSD 13.11 326: [2] xf_out->m_type = 9, xf_in->m_type = 0 326: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 326: bspline_xform_initialize 326: rdims = (2,2,2) 326: vox_per_rgn = (22,22,22) 326: cdims = (5 5 5) 326: ** Registration worker thread finished. 326: Writing transformation ... 326: Warping... 326: Running: plm_warp_native 326: Converting input image... 326: Converting xform... 326: bspline_xform_initialize 326: rdims = (2,2,2) 326: vox_per_rgn = (22,22,22) 326: cdims = (5 5 5) 326: Creating output vf... 326: Creating output volume... 326: Running native warper... 326: bspline_warp complete. 326: Back convert to original type... 326: > Convert vf to itk 326: > Conversion complete. 326: plm_warp_native is complete. 326: Saving image... 326: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-img.mha 326: Saving vf... 326: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-vf.mha 326: Load: 0.0777299 326: Run: 0.0654061 326: Save: 0.069196 326: Total: 0.212332 326: Finished! 326: 326: STDERR: 326: Not an error 99/578 Test #326: plm-bsp-mse-l ......................... Passed 0.66 sec test 444 Start 444: plm-compose-a 444: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-xf.txt;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 444: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 444: Test timeout computed to be: 1500 385: RETVAL: 0 385: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha 385: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha 385: Launching registration worker thread 385: Inside registration worker thread 385: Doing registration stage 385: [1] xf_in->m_type = 0, xf_out->m_type = 0 385: RESAMPLE 1 1: (2 2 2), (2 2 2) 385: RESAMPLE 1 1: (2 2 2), (2 2 2) 385: volume_calc_grad complete. 385: bspline_xform_initialize 385: Warning: vox_per_rgn was less than 4. 385: Warning: vox_per_rgn was less than 4. 385: Warning: vox_per_rgn was less than 4. 385: rdims = (5,5,5) 385: vox_per_rgn = (4,4,4) 385: cdims = (8 8 8) 385: Algorithm flavor = h 385: Threading = 0 385: Landmarks: 8 fixed, 8 moving, lambda = 1.000000 385: >> Checking JH allocation 385: Computing landmark grid coordinates 385: image dc=-1 0 0 0 -1 0 0 0 1 385: image or=250 250 -236.842 385: image dm=19 19 19 385: [0], (-51.7821 -52.1629 46.0528) -> (11.467712 11.482183 10.750000) 385: [1], (52.5439 -52.1629 46.053) -> (7.503327 11.482183 10.750008) 385: [2], (53.3054 53.6862 46.053) -> (7.474390 7.459919 10.750008) 385: [3], (-52.5436 52.9247 46.053) -> (11.496650 7.488857 10.750008) 385: [4], (-52.5436 -52.1629 -46.0525) -> (11.496650 11.482183 7.250000) 385: [5], (53.3054 -51.7821 -46.053) -> (7.474390 11.467712 7.249981) 385: [6], (52.1632 53.3054 -46.053) -> (7.517794 7.474390 7.249981) 385: [7], (-52.9244 53.3054 -46.053) -> (11.511120 7.474390 7.249981) 385: BSPLINE PARMS 385: max_its = 5 385: max_feval = 5 385: BSPLINE XFORM HEADER 385: vox_per_rgn = 4 4 4 385: roi_offset = 0 0 0 385: roi_dim = 19 19 19 385: img_dc = -1 0 0 0 -1 0 0 0 1 385: BST METRICS 385: MET 110100 MSE 1.000000 385: Setting nmax, mmax = 1536 41 385: >>> START 385: This problem is unconstrained. 385: [ 0, 0] SCORE 1785.722 NV 6859 GM -104.585 GN 27.6 [ 0.003 s ] 385: MSE 1339.480 LM 446.242 385: CMIN 0.00 CAVG 0.00 CMAX 0.00 385: LSD 0.00 385: [ 0, 1] SCORE 1740.786 NV 6859 GM -103.163 GN 27.2 [ 0.004 s ] 385: MSE 1303.402 LM 437.384 385: CMIN -0.03 CAVG 0.00 CMAX 0.57 385: LSD 1.00 385: [ 0, 2] SCORE 1567.600 NV 6859 GM -97.477 GN 25.7 [ 0.004 s ] 385: MSE 1164.662 LM 402.938 385: CMIN -0.17 CAVG 0.01 CMAX 2.86 385: LSD 5.00 385: [ 0, 3] SCORE 979.240 NV 6859 GM -74.784 GN 19.7 [ 0.004 s ] 385: MSE 698.326 LM 280.914 385: CMIN -0.71 CAVG 0.05 CMAX 12.03 385: LSD 21.00 385: [ 1, 4] SCORE 118.835 NV 6859 GM 0.596 GN 3.68 [ 0.006 s ] 385: MSE 81.402 LM 37.433 385: CMIN -1.76 CAVG 0.19 CMAX 39.56 385: LSD 55.80 385: [ 2, 5] SCORE 69.736 NV 6859 GM 2.657 GN 2.64 [ 0.004 s ] 385: MSE 47.343 LM 22.393 385: CMIN -3.07 CAVG 0.19 CMAX 44.32 385: LSD 10.82 385: [2] xf_out->m_type = 9, xf_in->m_type = 0 385: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 385: bspline_xform_initialize 385: rdims = (5,5,5) 385: vox_per_rgn = (8,8,8) 385: cdims = (8 8 8) 385: ** Registration worker thread finished. 385: Writing transformation ... 385: Warping... 385: Running: plm_warp_native 385: Converting input image... 385: Converting xform... 385: bspline_xform_initialize 385: rdims = (5,5,5) 385: vox_per_rgn = (8,8,8) 385: cdims = (8 8 8) 385: Creating output vf... 385: Creating output volume... 385: Running native warper... 385: bspline_warp complete. 385: Back convert to original type... 385: > Convert vf to itk 385: > Conversion complete. 385: plm_warp_native is complete. 385: Saving image... 385: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-img.mha 385: Saving vf... 385: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-vf.mha 385: Load: 0.0574849 385: Run: 0.043484 385: Save: 0.0959811 385: Total: 0.19695 385: Finished! 385: 385: STDERR: 385: Not an error 337: RETVAL: 0 337: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 337: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha 337: Launching registration worker thread 337: Inside registration worker thread 337: Doing registration stage 337: [1] xf_in->m_type = 0, xf_out->m_type = 0 337: RESAMPLE 1 1: (2 2 2), (2 2 2) 337: RESAMPLE 1 1: (2 2 2), (2 2 2) 337: volume_calc_grad complete. 337: bspline_xform_initialize 337: rdims = (5,5,5) 337: vox_per_rgn = (4,4,4) 337: cdims = (8 8 8) 337: Algorithm flavor = c 337: Threading = 0 337: >> Checking JH allocation 337: >> Performing JH allocation 337: BSPLINE PARMS 337: max_its = 10 337: max_feval = 10 337: BSPLINE XFORM HEADER 337: vox_per_rgn = 4 4 4 337: roi_offset = 0 0 0 337: roi_dim = 19 19 19 337: img_dc = 1 0 0 0 1 0 0 0 1 337: BST METRICS 337: MET 110100 MI 1.000000 337: >> Performing JH initialization 337: Setting nmax, mmax = 1536 41 337: >>> START 337: This problem is unconstrained. 337: [ 0, 0] MI -0.4031359 NV 6859 GM 0.148 GN 0.02 [ 0.008 s ] 337: CMIN 0.01 CAVG 0.01 CMAX 0.01 337: LSD 0.00 337: [ 0, 1] MI -0.3911095 NV 6859 GM -0.174 GN 0.0182 [ 0.010 s ] 337: CMIN -0.26 CAVG 0.01 CMAX 0.05 337: LSD 1.00 337: [ 0, 2] MI -0.4031149 NV 6859 GM -0.183 GN 0.0211 [ 0.010 s ] 337: CMIN -0.04 CAVG 0.01 CMAX 0.02 337: LSD 0.18 337: [ 0, 3] MI -0.4046610 NV 6859 GM -0.025 GN 0.0104 [ 0.009 s ] 337: CMIN -0.01 CAVG 0.01 CMAX 0.01 337: LSD 0.09 337: [ 1, 4] MI -0.4047489 NV 6859 GM 0.114 GN 0.0175 [ 0.009 s ] 337: CMIN -0.01 CAVG 0.01 CMAX 0.02 337: LSD 0.02 337: [ 2, 5] MI -0.4048453 NV 6859 GM -0.028 GN 0.0107 [ 0.011 s ] 337: CMIN -0.01 CAVG 0.01 CMAX 0.02 337: LSD 0.02 337: [ 3, 6] MI -0.4049332 NV 6859 GM -0.040 GN 0.011 [ 0.008 s ] 337: CMIN -0.01 CAVG 0.01 CMAX 0.02 337: LSD 0.02 337: [ 4, 7] MI -0.4051392 NV 6859 GM 0.031 GN 0.0124 [ 0.006 s ] 337: CMIN -0.03 CAVG 0.01 CMAX 0.04 337: LSD 0.14 337: [ 5, 8] MI -0.4052844 NV 6859 GM -0.024 GN 0.00604 [ 0.016 s ] 337: CMIN -0.03 CAVG 0.01 CMAX 0.05 337: LSD 0.04 337: [ 6, 9] MI -0.4053446 NV 6859 GM -0.069 GN 0.00892 [ 0.009 s ] 337: CMIN -0.04 CAVG 0.01 CMAX 0.06 337: LSD 0.03 337: [ 7, 10] MI -0.4054493 NV 6859 GM -0.111 GN 0.0121 [ 0.009 s ] 337: CMIN -0.04 CAVG 0.01 CMAX 0.07 337: LSD 0.05 337: [2] xf_out->m_type = 9, xf_in->m_type = 0 337: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 337: bspline_xform_initialize 337: rdims = (5,5,5) 337: vox_per_rgn = (8,8,8) 337: cdims = (8 8 8) 337: ** Registration worker thread finished. 337: Writing transformation ... 337: Warping... 337: Running: plm_warp_native 337: Converting input image... 337: Converting xform... 337: bspline_xform_initialize 337: rdims = (5,5,5) 337: vox_per_rgn = (8,8,8) 337: cdims = (8 8 8) 337: Creating output vf... 337: Creating output volume... 337: Running native warper... 337: bspline_warp complete. 337: Back convert to original type... 337: > Convert vf to itk 337: > Conversion complete. 337: plm_warp_native is complete. 337: Saving image... 337: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-img.mha 337: Saving vf... 337: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-vf.mha 337: Load: 0.0934172 337: Run: 0.143803 337: Save: 0.0711761 337: Total: 0.308396 337: Finished! 337: 337: STDERR: 337: Not an error 293: RETVAL: 0 293: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2s.mha 293: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 293: Launching registration worker thread 293: Inside registration worker thread 293: Doing registration stage 293: [1] xf_in->m_type = 0, xf_out->m_type = 0 293: Fixed image for this stage: 293: Dim = 19 19 19 293: Origin = -236.842 -236.842 -236.842 293: Spacing = 26.316 26.316 26.316 293: Direction Cosines = 293: 1 0 0 293: 0 1 0 293: 0 0 1 293: Moving image for this stage: 293: Dim = 19 19 19 293: Origin = -236.842 -236.842 -236.842 293: Spacing = 26.3158 26.3158 26.3158 293: Direction Cosines = 293: 1 0 0 293: 0 1 0 293: 0 0 1 293: Initial Parameters = [0, 0, 0, 0, 0, 0, 1] 293: Starting ITK registration 293: StartEvent: [] 293: MSE [ 1, 0,-1.00] 50982.091 [0, 0, 0, 0, 0, 0, 1] * 293: MSE [ 2, 1,-1.00] 43798.343 [0, 0, 0, -0.4593838948324258, 0.47067772433152183, -1.9737006269275084, 0.8764184123566656] -7183.75 * 293: MSE [ 3, 2,-1.00] 39030.004 [0, 0, 0, -0.9555136001504676, 0.27777212751612945, -2.9263769176831524, 0.7999915714784266] -4768.34 * 293: MSE [ 4, 3,-1.00] 39030.004 [0, 0, 0, -0.9555136001504676, 0.27777212751612945, -2.9263769176831524, 0.7999915714784266] 0.00 293: MSE [ 5, 4,-1.00] 36227.691 [0, 0, 0, -1.5343609038060144, -0.7504423268028503, -2.552411232579159, 0.7582084073369945] -2802.31 * 293: MSE [ 6, 5,-1.00] 36227.691 [0, 0, 0, -1.5343609038060144, -0.7504423268028503, -2.552411232579159, 0.7582084073369945] 0.00 (tol) 293: EndEvent: [0, 0, 0, -1.5343609038060144, -0.7504423268028503, -2.552411232579159, 0.7582084073369945] 293: OnePlusOneEvolutionaryOptimizer: Maximum number of iterations (1) exceeded. 293: ITK registration complete 293: [2] xf_out->m_type = 4, xf_in->m_type = 0 293: Warping... 293: plm_warp_itk: xform_to_itk_vf 293: plm_warp_itk: convert_to_itk 293: plm_warp_itk: warping... 293: Saving image... 293: Trying to write image to plm-reg-itk-similarity-intermediate-img.mha 293: Doing registration stage 293: [1] xf_in->m_type = 4, xf_out->m_type = 0 293: Fixed image for this stage: 293: Dim = 38 38 38 293: Origin = -243.421 -243.421 -243.421 293: Spacing = 13.158 13.158 13.158 293: Direction Cosines = 293: 1 0 0 293: 0 1 0 293: 0 0 1 293: Moving image for this stage: 293: Dim = 38 38 38 293: Origin = -243.421 -243.421 -243.421 293: Spacing = 13.1579 13.1579 13.1579 293: Direction Cosines = 293: 1 0 0 293: 0 1 0 293: 0 0 1 293: Initial Parameters = [0, 0, 0, -1.5343609038060144, -0.7504423268028503, -2.552411232579159, 0.7582084073369945] 293: Starting ITK registration 293: StartEvent: [] 293: MSE [ 1, 0,-1.00] 53402.170 [0, 0, 0, -1.5343609038060144, -0.7504423268028503, -2.552411232579159, 0.7582084073369945] * 293: MSE [ 2, 1,-1.00] 40041.651 [0, 0, 0, -1.9937447986384402, -0.27976460247132845, -4.526111859506667, 0.6346268196936601] -13360.52 * 293: MSE [ 3, 2,-1.00] 32234.274 [0, 0, 0, -2.4898745039564822, -0.4726701992867208, -5.478788150262311, 0.558199978815421] -7807.38 * 293: MSE [ 4, 3,-1.00] 32234.274 [0, 0, 0, -2.4898745039564822, -0.4726701992867208, -5.478788150262311, 0.558199978815421] 0.00 293: MSE [ 5, 4,-1.00] 31471.432 [0, 0, 0, -3.068721807612029, -1.5008846536057006, -5.104822465158318, 0.5164168146739889] -762.84 * 293: MSE [ 6, 5,-1.00] 31471.432 [0, 0, 0, -3.068721807612029, -1.5008846536057006, -5.104822465158318, 0.5164168146739889] 0.00 (tol) 293: EndEvent: [0, 0, 0, -3.068721807612029, -1.5008846536057006, -5.104822465158318, 0.5164168146739889] 293: OnePlusOneEvolutionaryOptimizer: Maximum number of iterations (1) exceeded. 293: ITK registration complete 293: [2] xf_out->m_type = 4, xf_in->m_type = 4 293: Warping... 293: plm_warp_itk: xform_to_itk_vf 293: plm_warp_itk: convert_to_itk 293: plm_warp_itk: warping... 293: Saving image... 293: Trying to write image to plm-reg-itk-similarity-img.mha 293: ** Registration worker thread finished. 293: Writing transformation ... 293: Warping... 293: plm_warp_itk: xform_to_itk_vf 293: plm_warp_itk: convert_to_itk 293: plm_warp_itk: warping... 293: Saving image... 293: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-a-img.mha 293: Saving vf... 293: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-a-vf.mha 293: Load: 0.061096 293: Run: 0.409031 293: Save: 0.0197711 293: Total: 0.489898 293: Finished! 293: 293: STDERR: 293: Not an error 424: RETVAL: 0 424: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 424: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 424: Launching registration worker thread 424: Inside registration worker thread 424: *** Executing adjust process *** 424: Warping... 424: plm_warp_itk: xform_to_itk_vf 424: plm_warp_itk: convert_to_itk 424: plm_warp_itk: warping... 424: ** Registration worker thread finished. 424: Saving image... 424: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.mha 424: Load: 0.0759361 424: Run: 0.00359893 424: Save: 0.011312 424: Total: 0.090847 424: Finished! 424: 424: STDERR: 424: Not an error 100/578 Test #337: plm-bsp-mi-c .......................... Passed 0.68 sec 101/578 Test #385: plm-bsp-landmark-d .................... Passed 0.54 sec 206: RETVAL: 0 206: STDOUT: CT_SERIES_UID|1.2.826.0.1.3680043.8.274.1.1.8323329.1148218.1771237091.409467| 206: CT_STUDY_UID|1.2.826.0.1.3680043.8.274.1.1.8323329.1148218.1771237091.409483| 206: CT_FRAME_OF_REFERENCE_UID|1.2.826.0.1.3680043.8.274.1.1.8323329.1148218.1771237091.409484| 206: PATIENT_NAME|ANONYMOUS| 206: PATIENT_ID|PL977996017310804| 206: PATIENT_SEX|O| 206: STUDY_ID|10001| 206: OFFSET|-55.2632 -55.2632 -46.0526| 206: DIMENSION|512 512 7| 206: SPACING|0.215872 0.215872 13.1579| 206: ROI_NAMES|| 206: Starting structure parsing 206: Starting contour parsing 206: Setting PIH from structure set spacing 206: PIH is: 206: Origin = -55.2632 -55.2632 -46.0526 206: Size = 512 512 7 206: Spacing = 0.2159 0.2159 13.1579 206: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 206: Rt_study_warp: Convert ss_img to cxt. 206: Rt_study_warp: Apply dicom_dir. 206: Rt_study_warp: Set geometry from PIH. 206: Rt_study_warp: Set rasterization geometry. 206: rast_dim = 512 512 7 206: rast_offset = -55.2632 -55.2632 -46.0526 206: rast_spacing = 0.215872 0.215872 13.1579 206: Rt_study_warp: warp and save ss. 206: Warp_and_save_ss: seg->rasterize 206: Rasterizing... 206: Converting... 206: Finished rasterization. 206: Warp_and_save_ss: save_ss_img 206: save_ss_img: save_ss_image 206: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha 206: save_ss_img: save_ss_list 206: Done. 206: Finished! 206: 206: STDERR: test 448 Start 448: plm-compose-b 448: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-vf.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 448: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 448: Test timeout computed to be: 1500 test 452 Start 452: plm-compose-c 452: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-xf.txt;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 452: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 452: Test timeout computed to be: 1500 102/578 Test #293: plm-reg-itk-similarity ................ Passed 0.77 sec 103/578 Test #424: plm-reg-process-a ..................... Passed 0.40 sec 206: Not an error 104/578 Test #206: plm-convert-cxt ....................... Passed 0.58 sec test 456 Start 456: plm-resample-a 456: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=resample;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha;--output-type;float;--subsample;2 2 2" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 456: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 456: Test timeout computed to be: 1500 test 459 Start 459: plm-resample-b 459: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=resample;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha;--output-type;float;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 459: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 459: Test timeout computed to be: 1500 358: RETVAL: 0 358: STDOUT: Loading fixed image [0]: gauss-ushort-1.mha 358: Loading moving image [0]: gauss-ushort-2.mha 358: Launching registration worker thread 358: Inside registration worker thread 358: Doing registration stage 358: [1] xf_in->m_type = 0, xf_out->m_type = 0 358: RESAMPLE 1 1: (2 2 2), (2 2 2) 358: RESAMPLE 1 1: (2 2 2), (2 2 2) 358: volume_calc_grad complete. 358: bspline_xform_initialize 358: rdims = (2,2,2) 358: vox_per_rgn = (11,11,11) 358: cdims = (5 5 5) 358: Algorithm flavor = h 358: Threading = 0 358: >> Checking JH allocation 358: BSPLINE PARMS 358: max_its = 5 358: max_feval = 5 358: BSPLINE XFORM HEADER 358: vox_per_rgn = 11 11 11 358: roi_offset = 0 0 0 358: roi_dim = 19 19 19 358: img_dc = 1 0 0 0 1 0 0 0 1 358: BST METRICS 358: MET 110100 MSE 1.000000 358: Setting nmax, mmax = 375 21 358: >>> START 358: This problem is unconstrained. 358: [ 0, 0] MSE 18754.957 NV 6859 GM -2979.950 GN 852 [ 0.004 s ] 358: CMIN 0.00 CAVG 0.00 CMAX 0.00 358: LSD 0.00 358: [ 0, 1] MSE 17837.379 NV 6859 GM -2882.285 GN 824 [ 0.003 s ] 358: CMIN -0.07 CAVG 0.01 CMAX 0.68 358: LSD 1.00 358: [ 0, 2] MSE 14463.688 NV 6858 GM -2822.063 GN 824 [ 0.004 s ] 358: CMIN -0.35 CAVG 0.05 CMAX 3.40 358: LSD 5.00 358: [ 0, 3] MSE 3828.428 NV 6286 GM -1585.519 GN 459 [ 0.003 s ] 358: CMIN -1.48 CAVG 0.20 CMAX 14.26 358: LSD 21.00 358: [ 1, 4] MSE 3098.900 NV 5455 GM 1176.149 GN 399 [ 0.003 s ] 358: CMIN -1.74 CAVG 0.44 CMAX 32.50 358: LSD 27.95 358: [ 2, 5] MSE 281.899 NV 5851 GM 54.406 GN 43.4 [ 0.005 s ] 358: CMIN -1.73 CAVG 0.34 CMAX 23.98 358: LSD 13.11 358: [2] xf_out->m_type = 9, xf_in->m_type = 0 358: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 358: bspline_xform_initialize 358: rdims = (2,2,2) 358: vox_per_rgn = (22,22,22) 358: cdims = (5 5 5) 358: ** Registration worker thread finished. 358: Writing transformation ... 358: Warping... 358: Running: plm_warp_native 358: Converting input image... 358: Converting xform... 358: bspline_xform_initialize 358: rdims = (2,2,2) 358: vox_per_rgn = (22,22,22) 358: cdims = (5 5 5) 358: Creating output vf... 358: Creating output volume... 358: Running native warper... 358: bspline_warp complete. 358: Back convert to original type... 358: > Convert vf to itk 358: > Conversion complete. 358: plm_warp_native is complete. 358: Saving image... 358: Trying to write image to plm-bsp-ushort-img.mha 358: Saving vf... 358: Trying to write image to plm-bsp-ushort-vf.mha 358: Load: 0.129384 358: Run: 0.029978 358: Save: 0.095845 358: Total: 0.255207 358: Finished! 358: 358: STDERR: 358: Not an error 105/578 Test #358: plm-bsp-ushort ........................ Passed 0.67 sec 301: RETVAL: 0 301: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 301: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 301: Launching registration worker thread 301: Inside registration worker thread 301: Doing registration stage 301: [1] xf_in->m_type = 0, xf_out->m_type = 0 301: Ready to start registration. 301: MSE [ 0] 18945.891 [ 0.071 secs] 301: MSE [ 1] 9752.760 [ 0.057 secs] 301: MSE [ 2] 3751.365 [ 0.059 secs] 301: MSE [ 3] 960.721 [ 0.106 secs] 301: MSE [ 4] 204.827 [ 0.107 secs] 301: Done with registration. Writing output... 301: Deformation stats (out) 301: VF_MAX = 97.6986 VF_AVG = 31.9237 301: [2] xf_out->m_type = 8, xf_in->m_type = 0 301: ** Registration worker thread finished. 301: Warping... 301: plm_warp_itk: xform_to_itk_vf 301: plm_warp_itk: convert_to_itk 301: plm_warp_itk: warping... 301: Saving image... 301: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-img.mha 301: Saving vf... 301: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-vf.mha 301: Load: 0.0508912 301: Run: 0.411181 301: Save: 0.031055 301: Total: 0.493127 301: Finished! 301: 301: STDERR: 301: Not an error test 465 Start 465: plm-scale-a 465: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-scale-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=scale;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd;--weight;0.4;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 465: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 465: Test timeout computed to be: 1500 test 468 Start 468: plm-scale-vf-a 468: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-scale-vf-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=scale;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd;--weight;0.4;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 468: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 468: Test timeout computed to be: 1500 361: RETVAL: 0 361: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha 361: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-2.mha 361: Launching registration worker thread 361: Inside registration worker thread 361: Doing registration stage 361: [1] xf_in->m_type = 0, xf_out->m_type = 0 361: RESAMPLE 1 1: (2 2 2), (2 2 2) 361: RESAMPLE 1 1: (2 2 2), (2 2 2) 361: volume_calc_grad complete. 361: bspline_xform_initialize 361: rdims = (2,2,2) 361: vox_per_rgn = (11,11,11) 361: cdims = (5 5 5) 361: Algorithm flavor = h 361: Threading = 0 361: >> Checking JH allocation 361: BSPLINE PARMS 361: max_its = 5 361: max_feval = 5 361: BSPLINE XFORM HEADER 361: vox_per_rgn = 11 11 11 361: roi_offset = 0 0 0 361: roi_dim = 19 19 19 361: img_dc = 1 0 0 0 1 0 0 0 1 361: BST METRICS 361: MET 110100 MSE 1.000000 361: Setting nmax, mmax = 375 21 361: >>> START 361: This problem is unconstrained. 361: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.004 s ] 361: CMIN 0.00 CAVG 0.00 CMAX 0.00 361: LSD 0.00 361: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.004 s ] 361: CMIN -0.07 CAVG 0.01 CMAX 0.68 361: LSD 1.00 361: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.009 s ] 361: CMIN -0.35 CAVG 0.05 CMAX 3.40 361: LSD 5.00 361: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.008 s ] 361: CMIN -1.48 CAVG 0.20 CMAX 14.26 361: LSD 21.00 361: [ 1, 4] MSE 3098.536 NV 5455 GM 1176.092 GN 399 [ 0.003 s ] 361: CMIN -1.74 CAVG 0.44 CMAX 32.50 361: LSD 27.95 361: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.003 s ] 361: CMIN -1.73 CAVG 0.34 CMAX 23.99 361: LSD 13.11 361: [2] xf_out->m_type = 9, xf_in->m_type = 0 361: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 361: bspline_xform_initialize 361: rdims = (2,2,2) 361: vox_per_rgn = (22,22,22) 361: cdims = (5 5 5) 361: ** Registration worker thread finished. 361: Writing transformation ... 361: Warping... 361: Running: plm_warp_native 361: Converting input image... 361: Converting xform... 361: bspline_xform_initialize 361: rdims = (2,2,2) 361: vox_per_rgn = (22,22,22) 361: cdims = (5 5 5) 361: Creating output vf... 361: Creating output volume... 361: Running native warper... 361: bspline_warp complete. 361: Back convert to original type... 361: > Convert vf to itk 361: > Conversion complete. 361: plm_warp_native is complete. 361: Saving image... 361: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-img.mha 361: Saving vf... 361: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-vf.mha 361: Load: 0.0774491 361: Run: 0.052835 361: Save: 0.09515 361: Total: 0.225434 361: Finished! 361: 361: STDERR: 361: Not an error 379: RETVAL: 0 379: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha 379: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha 379: Loading fixed landmarks: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv 379: Loading moving landmarks: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv 379: Launching registration worker thread 379: Inside registration worker thread 379: Doing registration stage 379: [1] xf_in->m_type = 0, xf_out->m_type = 0 379: RESAMPLE 1 1: (2 2 2), (2 2 2) 379: RESAMPLE 1 1: (2 2 2), (2 2 2) 379: volume_calc_grad complete. 379: bspline_xform_initialize 379: Warning: vox_per_rgn was less than 4. 379: Warning: vox_per_rgn was less than 4. 379: Warning: vox_per_rgn was less than 4. 379: rdims = (5,5,5) 379: vox_per_rgn = (4,4,4) 379: cdims = (8 8 8) 379: Algorithm flavor = h 379: Threading = 0 379: Landmarks: 8 fixed, 8 moving, lambda = 1.000000 379: >> Checking JH allocation 379: Computing landmark grid coordinates 379: image dc=-1 0 0 0 -1 0 0 0 1 379: image or=250 250 -236.842 379: image dm=19 19 19 379: [0], (-51.7821 -52.1629 46.0528) -> (11.467712 11.482183 10.750000) 379: [1], (52.5439 -52.1629 46.053) -> (7.503327 11.482183 10.750008) 379: [2], (53.3054 53.6862 46.053) -> (7.474390 7.459919 10.750008) 379: [3], (-52.5436 52.9247 46.053) -> (11.496650 7.488857 10.750008) 379: [4], (-52.5436 -52.1629 -46.0525) -> (11.496650 11.482183 7.250000) 379: [5], (53.3054 -51.7821 -46.053) -> (7.474390 11.467712 7.249981) 379: [6], (52.1632 53.3054 -46.053) -> (7.517794 7.474390 7.249981) 379: [7], (-52.9244 53.3054 -46.053) -> (11.511120 7.474390 7.249981) 379: BSPLINE PARMS 379: max_its = 5 379: max_feval = 5 379: BSPLINE XFORM HEADER 379: vox_per_rgn = 4 4 4 379: roi_offset = 0 0 0 379: roi_dim = 19 19 19 379: img_dc = -1 0 0 0 -1 0 0 0 1 379: BST METRICS 379: MET 110100 MSE 1.000000 379: Setting nmax, mmax = 1536 41 379: >>> START 379: This problem is unconstrained. 379: [ 0, 0] SCORE 1785.722 NV 6859 GM -104.585 GN 27.6 [ 0.004 s ] 379: MSE 1339.480 LM 446.242 379: CMIN 0.00 CAVG 0.00 CMAX 0.00 379: LSD 0.00 379: [ 0, 1] SCORE 1740.786 NV 6859 GM -103.163 GN 27.2 [ 0.004 s ] 379: MSE 1303.402 LM 437.384 379: CMIN -0.03 CAVG 0.00 CMAX 0.57 379: LSD 1.00 379: [ 0, 2] SCORE 1567.600 NV 6859 GM -97.477 GN 25.7 [ 0.004 s ] 379: MSE 1164.662 LM 402.938 379: CMIN -0.17 CAVG 0.01 CMAX 2.86 379: LSD 5.00 379: [ 0, 3] SCORE 979.240 NV 6859 GM -74.784 GN 19.7 [ 0.004 s ] 379: MSE 698.326 LM 280.914 379: CMIN -0.71 CAVG 0.05 CMAX 12.03 379: LSD 21.00 379: [ 1, 4] SCORE 118.835 NV 6859 GM 0.596 GN 3.68 [ 0.006 s ] 379: MSE 81.402 LM 37.433 379: CMIN -1.76 CAVG 0.19 CMAX 39.56 379: LSD 55.80 379: [ 2, 5] SCORE 69.736 NV 6859 GM 2.657 GN 2.64 [ 0.005 s ] 379: MSE 47.343 LM 22.393 379: CMIN -3.07 CAVG 0.19 CMAX 44.32 379: LSD 10.82 379: [2] xf_out->m_type = 9, xf_in->m_type = 0 379: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 379: bspline_xform_initialize 379: rdims = (5,5,5) 379: vox_per_rgn = (8,8,8) 379: cdims = (8 8 8) 379: Writing transformation ... 379: Warping... 379: Running: plm_warp_native 379: Converting input image... 379: Converting xform... 379: bspline_xform_initialize 379: rdims = (5,5,5) 379: vox_per_rgn = (8,8,8) 379: cdims = (8 8 8) 379: ** Registration worker thread finished. 379: Creating output vf... 379: Creating output volume... 379: Running native warper... 379: bspline_warp complete. 379: Back convert to original type... 379: > Convert vf to itk 379: > Conversion complete. 379: plm_warp_native is complete. 379: Saving image... 379: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-img.mha 379: Saving warped landmarks... 379: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-warped.fcsv 379: Saving vf... 379: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-vf.mha 379: Load: 0.091404 379: Run: 0.044723 379: Save: 0.0773761 379: Total: 0.213503 379: Finished! 379: 379: STDERR: 379: Not an error 106/578 Test #301: plm-reg-itk-demons .................... Passed 0.79 sec 107/578 Test #361: plm-bsp-double ........................ Passed 0.69 sec 108/578 Test #379: plm-bsp-landmark-b .................... Passed 0.61 sec test 474 Start 474: plm-thumbnail-a 474: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=thumbnail;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png;--spacing;2" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 474: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 474: Test timeout computed to be: 1500 test 477 Start 477: plm-thumbnail-b 477: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=thumbnail;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png;--spacing;2" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 477: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 477: Test timeout computed to be: 1500 test 480 Start 480: plm-thumbnail-c 480: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=thumbnail;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png;--spacing;2;--auto-adjust" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 480: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 480: Test timeout computed to be: 1500 288: RETVAL: 0 288: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 288: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 288: Launching registration worker thread 288: Inside registration worker thread 288: Doing registration stage 288: [1] xf_in->m_type = 0, xf_out->m_type = 0 288: Fixed image for this stage: 288: Dim = 19 19 19 288: Origin = -236.842 -236.842 -236.842 288: Spacing = 26.3158 26.3158 26.3158 288: Direction Cosines = 288: 1 0 0 288: 0 1 0 288: 0 0 1 288: Moving image for this stage: 288: Dim = 19 19 19 288: Origin = -236.842 -236.842 -236.842 288: Spacing = 26.3158 26.3158 26.3158 288: Direction Cosines = 288: 1 0 0 288: 0 1 0 288: 0 0 1 288: Initial Parameters = [0, 0, 0, 0, 0, 0] 288: Starting ITK registration 288: StartEvent: [0, 0, 0, 0, 0, 0] 288: MSE [ 0, 0,10.00] 1339.481 [-1.2690549843853355e-19, 8.106231710930287e-8, -8.10623171166634e-8, 9.999999999999996, -1.0989223005411788e-14, -1.0957496630802156e-14] 288: :: [0, 0, 0, 0, 0, 0] 288: * 288: MSE [ 1, 1,10.00] 368.982 [3.948814588187704e-18, 1.6278511950118221e-7, -1.6278512055969494e-7, 19.999999999999915, 8.96985283760344e-7, 8.969852838484713e-7] -970.50 288: :: [-1.2690549843853355e-19, 8.106231710930287e-8, -8.10623171166634e-8, 9.999999999999996, -1.0989223005411788e-14, -1.0957496630802156e-14] 288: * 288: MSE [ 2, 2, 5.00] 181.733 [-2.480972382701075e-17, 5.896377564993908e-7, -5.896377773035806e-7, 15.000000000001307, 0.0000033932258796038175, 0.0000033932258302637807] -187.25 288: :: [3.948814588187704e-18, 1.6278511950118221e-7, -1.6278512055969494e-7, 19.999999999999915, 8.96985283760344e-7, 8.969852838484713e-7] 288: * 288: MSE [ 3, 3, 2.50] 183.524 [-3.426598434163539e-17, 8.13174257136225e-7, -8.131742896680259e-7, 17.499999999998433, 0.000006036537006926167, 0.0000060365368355038775] 1.79 (tol) 288: EndEvent: [-3.426598434163539e-17, 8.13174257136225e-7, -8.131742896680259e-7, 17.499999999998433, 0.000006036537006926167, 0.0000060365368355038775] 288: VersorTransformOptimizer: Maximum number of iterations (1) exceeded. 288: ITK registration complete 288: [2] xf_out->m_type = 2, xf_in->m_type = 0 288: Warping... 288: plm_warp_itk: xform_to_itk_vf 288: plm_warp_itk: convert_to_itk 288: plm_warp_itk: warping... 288: Saving image... 288: Trying to write image to plm-reg-itk-rigid-a-intermediate-img.mha 288: Doing registration stage 288: [1] xf_in->m_type = 2, xf_out->m_type = 0 288: Fixed image for this stage: 288: Dim = 38 38 38 288: Origin = -243.421 -243.421 -243.421 288: Spacing = 13.1579 13.1579 13.1579 288: Direction Cosines = 288: 1 0 0 288: 0 1 0 288: 0 0 1 288: Moving image for this stage: 288: Dim = 38 38 38 288: Origin = -243.421 -243.421 -243.421 288: Spacing = 13.1579 13.1579 13.1579 288: Direction Cosines = 288: 1 0 0 288: 0 1 0 288: 0 0 1 288: Initial Parameters = [3.948814588187704e-18, 1.6278511950118221e-7, -1.6278512055969494e-7, 19.999999999999915, 8.96985283760344e-7, 8.969852838484713e-7] 288: Starting ITK registration 288: StartEvent: [3.948814588187704e-18, 1.6278511950118221e-7, -1.6278512055969494e-7, 19.999999999999915, 8.96985283760344e-7, 8.969852838484713e-7] 288: MSE [ 0, 0,10.00] 616.559 [2.78808067201291e-16, -0.0000033302360496369253, 0.000003330235947601865, 10.000000000052827, -0.00002101917451086502, -0.0000210191744504839] 288: :: [3.948814588187704e-18, 1.6278511950118221e-7, -1.6278512055969494e-7, 19.999999999999915, 8.96985283760344e-7, 8.969852838484713e-7] 288: * 288: MSE [ 1, 1, 5.00] 1335.870 [8.582730722884134e-17, -0.0000019933576718210944, 0.0000019933576419261905, 14.9999999999192, -0.000046728744954905763, -0.000046728745989989945] 719.31 288: MSE [ 2, 2, 5.00] 909.428 [-2.6289800410106318e-17, -9.21502361697532e-7, 9.215023822086894e-7, 19.99999999966778, -0.00001133795319662742, -0.00001133795339801649] -426.44 288: MSE [ 3, 3, 2.50] 616.561 [6.777731293502111e-16, 0.000004240909186579087, -0.000004240909079880501, 17.500000002328246, 0.00006956053055446652, 0.00006956053211996925] -292.87 288: MSE [ 4, 4, 1.25] 668.182 [2.2707612715849427e-16, 0.0000031399063411274567, -0.000003139906306104394, 18.75000000156098, 0.000038669894867269056, 0.000038669895748187] 51.62 288: EndEvent: [2.2707612715849427e-16, 0.0000031399063411274567, -0.000003139906306104394, 18.75000000156098, 0.000038669894867269056, 0.000038669895748187] 288: VersorTransformOptimizer: Maximum number of iterations (5) exceeded. 288: ITK registration complete 288: [2] xf_out->m_type = 2, xf_in->m_type = 2 288: ** Registration worker thread finished. 288: Writing transformation ... 288: Warping... 288: plm_warp_itk: xform_to_itk_vf 288: plm_warp_itk: convert_to_itk 288: plm_warp_itk: warping... 288: Saving image... 288: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-img.mha 288: Saving vf... 288: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-vf.mha 288: Load: 0.0958271 288: Run: 0.375371 288: Save: 0.0231159 288: Total: 0.494314 288: Finished! 288: 288: STDERR: 288: Not an error 109/578 Test #288: plm-reg-itk-rigid-a ................... Passed 0.85 sec 452: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 452: PARMS is compose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-xf.txt;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha 452: EXPECTED_ERRNO is 444: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 444: PARMS is compose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-xf.txt;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha 444: EXPECTED_ERRNO is 448: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 448: PARMS is compose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-vf.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-compose-vf.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha 448: EXPECTED_ERRNO is 456: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 456: PARMS is resample;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha;--output-type;float;--subsample;2 2 2 456: EXPECTED_ERRNO is 465: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 465: PARMS is scale;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd;--weight;0.4;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha 465: EXPECTED_ERRNO is test 483 Start 483: plm-intersect 483: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-intersect" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=intersect;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 483: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 483: Test timeout computed to be: 1500 459: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 459: PARMS is resample;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha;--output-type;float;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha 459: EXPECTED_ERRNO is 468: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 468: PARMS is scale;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd;--weight;0.4;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha 468: EXPECTED_ERRNO is 346: RETVAL: 0 346: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 346: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha 346: Launching registration worker thread 346: Inside registration worker thread 346: Doing registration stage 346: [1] xf_in->m_type = 0, xf_out->m_type = 0 346: RESAMPLE 1 1: (2 2 2), (2 2 2) 346: RESAMPLE 1 1: (2 2 2), (2 2 2) 346: volume_calc_grad_mag complete. 346: volume_calc_grad_mag complete. 346: volume_calc_grad complete. 346: bspline_xform_initialize 346: rdims = (5,5,5) 346: vox_per_rgn = (4,4,4) 346: cdims = (8 8 8) 346: Algorithm flavor = k 346: Threading = 0 346: >> Checking JH allocation 346: BSPLINE PARMS 346: max_its = 20 346: max_feval = 20 346: BSPLINE XFORM HEADER 346: vox_per_rgn = 4 4 4 346: roi_offset = 0 0 0 346: roi_dim = 19 19 19 346: img_dc = 1 0 0 0 1 0 0 0 1 346: BST METRICS 346: MET 110100 GM 1.000000 346: Setting nmax, mmax = 1536 41 346: >>> START 346: This problem is unconstrained. 346: [ 0, 0] GM 172.628 NV 6859 GM -29.170 GN 4.3 [ 0.004 s ] 346: CMIN 0.00 CAVG 0.00 CMAX 0.00 346: LSD 0.00 346: [ 0, 1] GM 167.918 NV 6859 GM -28.658 GN 4.22 [ 0.004 s ] 346: CMIN -0.13 CAVG 0.00 CMAX 0.22 346: LSD 1.00 346: [ 0, 2] GM 149.959 NV 6859 GM -26.618 GN 3.91 [ 0.005 s ] 346: CMIN -0.66 CAVG 0.02 CMAX 1.08 346: LSD 5.00 346: [ 0, 3] GM 86.734 NV 6751 GM -21.624 GN 3.16 [ 0.004 s ] 346: CMIN -2.76 CAVG 0.09 CMAX 4.52 346: LSD 21.00 346: [ 1, 4] GM 45.340 NV 6066 GM 12.985 GN 2.28 [ 0.006 s ] 346: CMIN -8.79 CAVG 0.42 CMAX 26.13 346: LSD 77.01 346: [ 2, 5] GM 7.1179175 NV 6185 GM -1.370 GN 0.385 [ 0.004 s ] 346: CMIN -7.46 CAVG 0.30 CMAX 17.43 346: LSD 31.38 346: [ 3, 6] GM 5.8718486 NV 6215 GM -1.061 GN 0.253 [ 0.004 s ] 346: CMIN -7.26 CAVG 0.31 CMAX 16.96 346: LSD 4.23 346: [ 4, 7] GM 4.1875200 NV 6252 GM -0.481 GN 0.302 [ 0.006 s ] 346: CMIN -7.17 CAVG 0.33 CMAX 15.50 346: LSD 8.87 346: [ 5, 8] GM 2.5404434 NV 6268 GM 0.199 GN 0.327 [ 0.005 s ] 346: CMIN -7.33 CAVG 0.37 CMAX 12.64 346: LSD 13.58 346: [ 6, 9] GM 1.5809063 NV 6272 GM 0.253 GN 0.261 [ 0.007 s ] 346: CMIN -7.57 CAVG 0.41 CMAX 16.21 346: LSD 17.78 346: [ 7, 10] GM 1.2611113 NV 6186 GM -0.858 GN 0.254 [ 0.007 s ] 346: CMIN -8.47 CAVG 0.41 CMAX 17.69 346: LSD 6.01 346: [ 8, 11] GM 0.8998204 NV 6202 GM -0.272 GN 0.0629 [ 0.009 s ] 346: CMIN -8.10 CAVG 0.41 CMAX 16.37 346: LSD 4.02 346: [ 9, 12] GM 0.8851209 NV 6200 GM -0.119 GN 0.0425 [ 0.006 s ] 346: CMIN -8.11 CAVG 0.41 CMAX 16.43 346: LSD 1.40 346: [10, 13] GM 0.8340189 NV 6185 GM -0.041 GN 0.0494 [ 0.004 s ] 346: CMIN -8.22 CAVG 0.42 CMAX 16.47 346: LSD 2.71 346: [11, 14] GM 0.7303342 NV 6158 GM 0.209 GN 0.0438 [ 0.026 s ] 346: CMIN -8.31 CAVG 0.43 CMAX 16.15 346: LSD 3.16 346: [12, 15] GM 0.6365445 NV 6149 GM -0.660 GN 0.078 [ 0.014 s ] 346: CMIN -8.30 CAVG 0.43 CMAX 15.18 346: LSD 6.07 346: [13, 16] GM 0.5679634 NV 6142 GM 0.051 GN 0.0445 [ 0.007 s ] 346: CMIN -8.24 CAVG 0.45 CMAX 14.83 346: LSD 4.36 346: [14, 17] GM 0.4986858 NV 6140 GM 0.219 GN 0.0371 [ 0.004 s ] 346: CMIN -8.07 CAVG 0.45 CMAX 14.65 346: LSD 3.34 346: [15, 18] GM 0.4631230 NV 6160 GM 0.148 GN 0.0299 [ 0.011 s ] 346: CMIN -7.80 CAVG 0.46 CMAX 14.76 346: LSD 4.03 346: [16, 19] GM 0.4685278 NV 6160 GM 0.115 GN 0.0395 [ 0.009 s ] 346: CMIN -7.51 CAVG 0.46 CMAX 15.22 346: LSD 3.59 346: [16, 20] GM 0.4544649 NV 6161 GM 0.152 GN 0.026 [ 0.009 s ] 346: CMIN -7.71 CAVG 0.46 CMAX 14.89 346: LSD 1.09 346: [2] xf_out->m_type = 9, xf_in->m_type = 0 346: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 346: bspline_xform_initialize 346: rdims = (5,5,5) 346: vox_per_rgn = (8,8,8) 346: cdims = (8 8 8) 346: ** Registration worker thread finished. 346: Writing transformation ... 346: Warping... 346: Running: plm_warp_native 346: Converting input image... 346: Converting xform... 346: bspline_xform_initialize 346: rdims = (5,5,5) 346: vox_per_rgn = (8,8,8) 346: cdims = (8 8 8) 346: Creating output vf... 346: Creating output volume... 346: Running native warper... 346: bspline_warp complete. 346: Back convert to original type... 346: > Convert vf to itk 346: > Conversion complete. 346: plm_warp_native is complete. 346: Saving image... 346: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-img.mha 346: Saving vf... 346: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-vf.mha 346: Load: 0.083467 346: Run: 0.194107 346: Save: 0.0749731 346: Total: 0.352547 346: Finished! 346: 346: STDERR: 346: Not an error 400: RETVAL: 0 400: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha 400: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 400: Launching registration worker thread 400: Inside registration worker thread 400: Doing registration stage 400: [1] xf_in->m_type = 0, xf_out->m_type = 0 400: RESAMPLE 1 1: (2 2 2), (2 2 2) 400: RESAMPLE 1 1: (2 2 2), (2 2 2) 400: volume_calc_grad complete. 400: bspline_xform_initialize 400: Warning: vox_per_rgn was less than 4. 400: Warning: vox_per_rgn was less than 4. 400: Warning: vox_per_rgn was less than 4. 400: rdims = (5,5,5) 400: vox_per_rgn = (4,4,4) 400: cdims = (8 8 8) 400: Algorithm flavor = c 400: Threading = 0 400: >> Checking JH allocation 400: BSPLINE PARMS 400: max_its = 5 400: max_feval = 5 400: BSPLINE XFORM HEADER 400: vox_per_rgn = 4 4 4 400: roi_offset = 0 0 0 400: roi_dim = 19 19 19 400: img_dc = 0.894427 0.447214 0 -0.447214 0.894427 0 0 0 1 400: BST METRICS 400: MET 110100 MSE 1.000000 400: Setting nmax, mmax = 1536 41 400: >>> START 400: This problem is unconstrained. 400: [ 0, 0] MSE 2326.658 NV 5814 GM -90.046 GN 30.1 [ 0.018 s ] 400: CMIN 0.00 CAVG 0.00 CMAX 0.00 400: LSD 0.00 400: [ 0, 1] MSE 2292.385 NV 5814 GM -88.991 GN 29.8 [ 0.004 s ] 400: CMIN -0.09 CAVG 0.00 CMAX 0.49 400: LSD 1.00 400: [ 0, 2] MSE 2160.182 NV 5814 GM -88.027 GN 29.4 [ 0.006 s ] 400: CMIN -0.46 CAVG 0.01 CMAX 2.46 400: LSD 5.00 400: [ 0, 3] MSE 1684.673 NV 5814 GM -70.229 GN 24.2 [ 0.016 s ] 400: CMIN -1.93 CAVG 0.04 CMAX 10.33 400: LSD 21.00 400: [ 1, 4] MSE 880.230 NV 5809 GM 22.704 GN 11.1 [ 0.008 s ] 400: CMIN -14.50 CAVG 0.20 CMAX 61.00 400: LSD 95.90 400: [ 2, 5] MSE 621.998 NV 5814 GM 5.047 GN 4.55 [ 0.009 s ] 400: CMIN -12.15 CAVG 0.16 CMAX 47.74 400: LSD 26.24 400: [2] xf_out->m_type = 9, xf_in->m_type = 0 400: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 400: bspline_xform_initialize 400: rdims = (5,5,5) 400: vox_per_rgn = (8,8,8) 400: cdims = (8 8 8) 400: ** Registration worker thread finished. 400: Writing transformation ... 400: Warping... 400: Running: plm_warp_native 400: Converting input image... 400: Converting xform... 400: bspline_xform_initialize 400: rdims = (5,5,5) 400: vox_per_rgn = (8,8,8) 400: cdims = (8 8 8) 400: Creating output vf... 400: Creating output volume... 400: Running native warper... 400: bspline_warp complete. 400: Back convert to original type... 400: > Convert vf to itk 400: > Conversion complete. 400: plm_warp_native is complete. 400: Saving image... 400: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-img.nrrd 400: Saving vf... 400: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-vf.nrrd 400: Load: 0.0412998 400: Run: 0.0993092 400: Save: 0.12995 400: Total: 0.270559 400: Finished! 400: 400: STDERR: 400: Not an error 474: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 474: PARMS is thumbnail;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png;--spacing;2 474: EXPECTED_ERRNO is 477: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 477: PARMS is thumbnail;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png;--spacing;2 477: EXPECTED_ERRNO is 110/578 Test #346: plm-bsp-gm-k .......................... Passed 0.76 sec test 486 Start 486: plm-union 486: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-union" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=union;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 486: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 486: Test timeout computed to be: 1500 111/578 Test #400: plm-bsp-dcos-d ........................ Passed 0.61 sec test 489 Start 489: plm-threshold-a 489: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=threshold;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha;--above;-888" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 489: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 489: Test timeout computed to be: 1500 480: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 480: PARMS is thumbnail;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png;--spacing;2;--auto-adjust 480: EXPECTED_ERRNO is 483: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 483: PARMS is intersect;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha 483: EXPECTED_ERRNO is 486: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 486: PARMS is union;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha 486: EXPECTED_ERRNO is 489: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 489: PARMS is threshold;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha;--above;-888 489: EXPECTED_ERRNO is 351: RETVAL: 0 351: STDOUT: Loading fixed image [0]: gauss-1.mha 351: Loading moving image [0]: gauss-2.mha 351: Launching registration worker thread 351: Inside registration worker thread 351: Doing registration stage 351: [1] xf_in->m_type = 0, xf_out->m_type = 0 351: RESAMPLE 1 1: (2 2 2), (2 2 2) 351: RESAMPLE 1 1: (2 2 2), (2 2 2) 351: volume_calc_grad complete. 351: bspline_xform_initialize 351: rdims = (2,2,2) 351: vox_per_rgn = (11,11,11) 351: cdims = (5 5 5) 351: Algorithm flavor = g 351: Threading = 0 351: >> Checking JH allocation 351: BSPLINE PARMS 351: max_its = 5 351: max_feval = 5 351: BSPLINE XFORM HEADER 351: vox_per_rgn = 11 11 11 351: roi_offset = 0 0 0 351: roi_dim = 19 19 19 351: img_dc = 1 0 0 0 1 0 0 0 1 351: BST METRICS 351: MET 110100 MSE 1.000000 351: Setting nmax, mmax = 375 21 351: >>> START 351: This problem is unconstrained. 351: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.024 s ] 351: CMIN 0.00 CAVG 0.00 CMAX 0.00 351: LSD 0.00 351: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.059 s ] 351: CMIN -0.07 CAVG 0.01 CMAX 0.68 351: LSD 1.00 351: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.097 s ] 351: CMIN -0.35 CAVG 0.05 CMAX 3.40 351: LSD 5.00 351: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.042 s ] 351: CMIN -1.48 CAVG 0.20 CMAX 14.26 351: LSD 21.00 351: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.098 s ] 351: CMIN -1.74 CAVG 0.44 CMAX 32.50 351: LSD 27.95 351: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.044 s ] 351: CMIN -1.73 CAVG 0.34 CMAX 23.99 351: LSD 13.11 351: [2] xf_out->m_type = 9, xf_in->m_type = 0 351: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 351: bspline_xform_initialize 351: rdims = (2,2,2) 351: vox_per_rgn = (22,22,22) 351: cdims = (5 5 5) 351: ** Registration worker thread finished. 351: Writing transformation ... 351: Warping... 351: Running: plm_warp_native 351: Converting input image... 351: Converting xform... 351: bspline_xform_initialize 351: rdims = (2,2,2) 351: vox_per_rgn = (22,22,22) 351: cdims = (5 5 5) 351: Creating output vf... 351: Creating output volume... 351: Running native warper... 351: bspline_warp complete. 351: Back convert to original type... 351: > Convert vf to itk 351: > Conversion complete. 351: plm_warp_native is complete. 351: Saving image... 351: Trying to write image to plm-bsp-openmp-img.mha 351: Saving vf... 351: Trying to write image to plm-bsp-openmp-vf.mha 351: Load: 0.0873799 351: Run: 0.415907 351: Save: 0.130726 351: Total: 0.634013 351: Finished! 351: 351: STDERR: 351: Not an error 415: RETVAL: 0 415: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 415: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 415: Launching registration worker thread 415: Inside registration worker thread 415: Doing registration stage 415: [1] xf_in->m_type = 0, xf_out->m_type = 0 415: Fixed image for this stage: 415: Dim = 19 19 19 415: Origin = -24.3421 -24.3421 -24.3421 415: Spacing = 2.63158 2.63158 2.63158 415: Direction Cosines = 415: 1 0 0 415: 0 1 0 415: 0 0 1 415: Moving image for this stage: 415: Dim = 19 19 19 415: Origin = -24.3421 -24.3421 -24.3421 415: Spacing = 2.63158 2.63158 2.63158 415: Direction Cosines = 415: 1 0 0 415: 0 1 0 415: 0 0 1 415: Initial Parameters = [0, 0, 0] 415: Starting ITK registration 415: StartEvent: [0, 0, 0] 415: MSE [ 0, 0,10.00] 18756.235 [9.999997615028182, -0.004883617032987085, -0.00488361703298731] 415: :: [0, 0, 0] 415: * 415: MSE [ 1, 1, 5.00] 1.116 [5.318441699151528, 1.2366948554205826, 1.2366948554205925] -18755.12 415: :: [9.999997615028182, -0.004883617032987085, -0.00488361703298731] 415: * 415: MSE [ 2, 2, 2.50] 5544.602 [7.610651940085832, 0.5310844064631247, 0.5310844064631272] 5543.49 415: MSE [ 3, 3, 2.50] 1453.699 [9.961460585442488, -0.07045474975050137, -0.07045474975050403] -4090.90 415: MSE [ 4, 4, 1.25] 4.252 [10.13062237366747, 0.8052975809356626, 0.8052975809356772] -1449.45 415: EndEvent: [10.13062237366747, 0.8052975809356626, 0.8052975809356772] 415: RegularStepGradientDescentOptimizer: Maximum number of iterations (5) exceeded. 415: ITK registration complete 415: [2] xf_out->m_type = 1, xf_in->m_type = 0 415: ** Registration worker thread finished. 415: Writing transformation ... 415: Warping... 415: plm_warp_itk: xform_to_itk_vf 415: plm_warp_itk: convert_to_itk 415: plm_warp_itk: warping... 415: Saving image... 415: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-img.nrrd 415: Saving vf... 415: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-vf.nrrd 415: Load: 0.126228 415: Run: 0.0872869 415: Save: 0.100988 415: Total: 0.314503 415: Finished! 415: 415: STDERR: 415: Not an error 112/578 Test #351: plm-bsp-openmp ........................ Passed 0.96 sec test 492 Start 492: plm-threshold-b 492: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=threshold;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha;--below;-900" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 492: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 492: Test timeout computed to be: 1500 343: RETVAL: 0 343: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 343: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha 343: Launching registration worker thread 343: Inside registration worker thread 343: Doing registration stage 343: [1] xf_in->m_type = 0, xf_out->m_type = 0 343: RESAMPLE 1 1: (2 2 2), (2 2 2) 343: RESAMPLE 1 1: (2 2 2), (2 2 2) 343: volume_calc_grad complete. 343: bspline_xform_initialize 343: rdims = (5,5,5) 343: vox_per_rgn = (4,4,4) 343: cdims = (8 8 8) 343: Algorithm flavor = k 343: Threading = 0 343: >> Checking JH allocation 343: >> Performing JH allocation 343: BSPLINE PARMS 343: max_its = 10 343: max_feval = 10 343: BSPLINE XFORM HEADER 343: vox_per_rgn = 4 4 4 343: roi_offset = 0 0 0 343: roi_dim = 19 19 19 343: img_dc = 1 0 0 0 1 0 0 0 1 343: BST METRICS 343: MET 110100 MI 1.000000 343: >> Performing JH initialization 343: Setting nmax, mmax = 1536 41 343: >>> START 343: This problem is unconstrained. 343: [ 0, 0] MI -0.4031359 NV 6859 GM 0.148 GN 0.02 [ 0.026 s ] 343: CMIN 0.01 CAVG 0.01 CMAX 0.01 343: LSD 0.00 343: [ 0, 1] MI -0.3911095 NV 6859 GM -0.174 GN 0.0182 [ 0.038 s ] 343: CMIN -0.26 CAVG 0.01 CMAX 0.05 343: LSD 1.00 343: [ 0, 2] MI -0.4031149 NV 6859 GM -0.183 GN 0.0211 [ 0.043 s ] 343: CMIN -0.04 CAVG 0.01 CMAX 0.02 343: LSD 0.18 343: [ 0, 3] MI -0.4046610 NV 6859 GM -0.025 GN 0.0104 [ 0.068 s ] 343: CMIN -0.01 CAVG 0.01 CMAX 0.01 343: LSD 0.09 343: [ 1, 4] MI -0.4047489 NV 6859 GM 0.114 GN 0.0175 [ 0.029 s ] 343: CMIN -0.01 CAVG 0.01 CMAX 0.02 343: LSD 0.02 343: [ 2, 5] MI -0.4048453 NV 6859 GM -0.028 GN 0.0107 [ 0.043 s ] 343: CMIN -0.01 CAVG 0.01 CMAX 0.02 343: LSD 0.02 343: [ 3, 6] MI -0.4049332 NV 6859 GM -0.040 GN 0.011 [ 0.048 s ] 343: CMIN -0.01 CAVG 0.01 CMAX 0.02 343: LSD 0.02 343: [ 4, 7] MI -0.4051392 NV 6859 GM 0.031 GN 0.0124 [ 0.027 s ] 343: CMIN -0.03 CAVG 0.01 CMAX 0.04 343: LSD 0.14 343: [ 5, 8] MI -0.4052844 NV 6859 GM -0.024 GN 0.00604 [ 0.015 s ] 343: CMIN -0.03 CAVG 0.01 CMAX 0.05 343: LSD 0.04 343: [ 6, 9] MI -0.4053446 NV 6859 GM -0.069 GN 0.00892 [ 0.025 s ] 343: CMIN -0.04 CAVG 0.01 CMAX 0.06 343: LSD 0.03 343: [ 7, 10] MI -0.4054493 NV 6859 GM -0.111 GN 0.0121 [ 0.008 s ] 343: CMIN -0.04 CAVG 0.01 CMAX 0.07 343: LSD 0.05 343: [2] xf_out->m_type = 9, xf_in->m_type = 0 343: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 343: bspline_xform_initialize 343: rdims = (5,5,5) 343: vox_per_rgn = (8,8,8) 343: cdims = (8 8 8) 343: ** Registration worker thread finished. 343: Writing transformation ... 343: Warping... 343: Running: plm_warp_native 343: Converting input image... 343: Converting xform... 343: bspline_xform_initialize 343: rdims = (5,5,5) 343: vox_per_rgn = (8,8,8) 343: cdims = (8 8 8) 343: Creating output vf... 343: Creating output volume... 343: Running native warper... 343: bspline_warp complete. 343: Back convert to original type... 343: > Convert vf to itk 343: > Conversion complete. 343: plm_warp_native is complete. 343: Saving image... 343: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-img.mha 343: Saving vf... 343: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-vf.mha 343: Load: 0.0723259 343: Run: 0.405167 343: Save: 0.12057 343: Total: 0.598063 343: Finished! 343: 343: STDERR: 343: Not an error 113/578 Test #415: plm-reg-dv-itk-translation ............ Passed 0.74 sec test 495 Start 495: plm-threshold-c 495: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=threshold;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha;--range;-900,-888" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 495: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 495: Test timeout computed to be: 1500 114/578 Test #343: plm-bsp-mi-k .......................... Passed 1.00 sec test 501 Start 501: plm-warp-a 501: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--algorithm;itk;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 501: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 501: Test timeout computed to be: 1500 320: RETVAL: 0 320: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 320: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 320: Launching registration worker thread 320: Inside registration worker thread 320: Doing registration stage 320: [1] xf_in->m_type = 0, xf_out->m_type = 0 320: RESAMPLE 1 1: (2 2 2), (2 2 2) 320: RESAMPLE 1 1: (2 2 2), (2 2 2) 320: volume_calc_grad complete. 320: bspline_xform_initialize 320: rdims = (2,2,2) 320: vox_per_rgn = (11,11,11) 320: cdims = (5 5 5) 320: Algorithm flavor = i 320: Threading = 0 320: >> Checking JH allocation 320: BSPLINE PARMS 320: max_its = 5 320: max_feval = 5 320: BSPLINE XFORM HEADER 320: vox_per_rgn = 11 11 11 320: roi_offset = 0 0 0 320: roi_dim = 19 19 19 320: img_dc = 1 0 0 0 1 0 0 0 1 320: BST METRICS 320: MET 110100 MSE 1.000000 320: Setting nmax, mmax = 375 21 320: >>> START 320: This problem is unconstrained. 320: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.042 s ] 320: CMIN 0.00 CAVG 0.00 CMAX 0.00 320: LSD 0.00 320: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.056 s ] 320: CMIN -0.07 CAVG 0.01 CMAX 0.68 320: LSD 1.00 320: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.074 s ] 320: CMIN -0.35 CAVG 0.05 CMAX 3.40 320: LSD 5.00 320: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.072 s ] 320: CMIN -1.48 CAVG 0.20 CMAX 14.26 320: LSD 21.00 320: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.061 s ] 320: CMIN -1.74 CAVG 0.44 CMAX 32.50 320: LSD 27.95 320: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.110 s ] 320: CMIN -1.73 CAVG 0.34 CMAX 23.99 320: LSD 13.11 320: [2] xf_out->m_type = 9, xf_in->m_type = 0 320: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 320: bspline_xform_initialize 320: rdims = (2,2,2) 320: vox_per_rgn = (22,22,22) 320: cdims = (5 5 5) 320: ** Registration worker thread finished. 320: Writing transformation ... 320: Warping... 320: Running: plm_warp_native 320: Converting input image... 320: Converting xform... 320: bspline_xform_initialize 320: rdims = (2,2,2) 320: vox_per_rgn = (22,22,22) 320: cdims = (5 5 5) 320: Creating output vf... 320: Creating output volume... 320: Running native warper... 320: bspline_warp complete. 320: Back convert to original type... 320: > Convert vf to itk 320: > Conversion complete. 320: plm_warp_native is complete. 320: Saving image... 320: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-img.mha 320: Saving vf... 320: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-vf.mha 320: Load: 0.124054 320: Run: 0.43521 320: Save: 0.0763431 320: Total: 0.635607 320: Finished! 320: 320: STDERR: 320: Not an error 115/578 Test #320: plm-bsp-mse-i ......................... Passed 1.07 sec test 504 Start 504: plm-warp-b 504: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha;--default-value;0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 504: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 504: Test timeout computed to be: 1500 492: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 492: PARMS is threshold;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha;--below;-900 492: EXPECTED_ERRNO is 388: RETVAL: 0 388: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha 388: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha 388: Loading fixed landmarks: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.txt 388: Error parsing fcsv file: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.txt 388: Loading moving landmarks: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.txt 388: Error parsing fcsv file: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.txt 388: Launching registration worker thread 388: Inside registration worker thread 388: Doing registration stage 388: [1] xf_in->m_type = 0, xf_out->m_type = 0 388: RESAMPLE 1 1: (2 2 2), (2 2 2) 388: RESAMPLE 1 1: (2 2 2), (2 2 2) 388: volume_calc_grad complete. 388: bspline_xform_initialize 388: Warning: vox_per_rgn was less than 4. 388: Warning: vox_per_rgn was less than 4. 388: Warning: vox_per_rgn was less than 4. 388: rdims = (5,5,5) 388: vox_per_rgn = (4,4,4) 388: cdims = (8 8 8) 388: Algorithm flavor = h 388: Threading = 0 388: Landmarks: 0 fixed, 0 moving, lambda = 1.000000 388: >> Checking JH allocation 388: BSPLINE PARMS 388: max_its = 5 388: max_feval = 5 388: BSPLINE XFORM HEADER 388: vox_per_rgn = 4 4 4 388: roi_offset = 0 0 0 388: roi_dim = 19 19 19 388: img_dc = -1 0 0 0 -1 0 0 0 1 388: BST METRICS 388: MET 110100 MSE 1.000000 388: Setting nmax, mmax = 1536 41 388: >>> START 388: This problem is unconstrained. 388: [ 0, 0] MSE 1339.480 NV 6859 GM -84.834 GN 23.2 [ 0.042 s ] 388: CMIN 0.00 CAVG 0.00 CMAX 0.00 388: LSD 0.00 388: [ 0, 1] MSE 1303.294 NV 6859 GM -83.620 GN 22.8 [ 0.004 s ] 388: CMIN -0.04 CAVG 0.00 CMAX 0.59 388: LSD 1.00 388: [ 0, 2] MSE 1164.232 NV 6859 GM -78.768 GN 21.5 [ 0.003 s ] 388: CMIN -0.19 CAVG 0.01 CMAX 2.96 388: LSD 5.00 388: [ 0, 3] MSE 698.336 NV 6859 GM -59.420 GN 16.2 [ 0.003 s ] 388: CMIN -0.80 CAVG 0.05 CMAX 12.42 388: LSD 21.00 388: [ 1, 4] MSE 89.012 NV 6859 GM 0.171 GN 3.29 [ 0.004 s ] 388: CMIN -2.05 CAVG 0.17 CMAX 39.56 388: LSD 52.33 388: [ 2, 5] MSE 51.991 NV 6859 GM 2.502 GN 2.38 [ 0.004 s ] 388: CMIN -3.69 CAVG 0.18 CMAX 41.73 388: LSD 11.03 388: [2] xf_out->m_type = 9, xf_in->m_type = 0 388: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 388: bspline_xform_initialize 388: rdims = (5,5,5) 388: vox_per_rgn = (8,8,8) 388: cdims = (8 8 8) 388: ** Registration worker thread finished. 388: Writing transformation ... 388: Warping... 388: Running: plm_warp_native 388: Converting input image... 388: Converting xform... 388: bspline_xform_initialize 388: rdims = (5,5,5) 388: vox_per_rgn = (8,8,8) 388: cdims = (8 8 8) 388: Creating output vf... 388: Creating output volume... 388: Running native warper... 388: bspline_warp complete. 388: Back convert to original type... 388: > Convert vf to itk 388: > Conversion complete. 388: plm_warp_native is complete. 388: Saving image... 388: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-img.mha 388: Saving warped landmarks... 388: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-warped.fcsv 388: Saving vf... 388: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-vf.mha 388: Load: 0.205469 388: Run: 0.0874388 388: Save: 0.15535 388: Total: 0.448258 388: Finished! 388: 388: STDERR: 388: Not an error 456: RETVAL: 0 456: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha 456: 456: STDERR: 456: Not an error 314: RETVAL: 0 314: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 314: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 314: Launching registration worker thread 314: Inside registration worker thread 314: Doing registration stage 314: [1] xf_in->m_type = 0, xf_out->m_type = 0 314: RESAMPLE 1 1: (2 2 2), (2 2 2) 314: RESAMPLE 1 1: (2 2 2), (2 2 2) 314: volume_calc_grad complete. 314: bspline_xform_initialize 314: rdims = (2,2,2) 314: vox_per_rgn = (11,11,11) 314: cdims = (5 5 5) 314: Algorithm flavor = g 314: Threading = 0 314: >> Checking JH allocation 314: BSPLINE PARMS 314: max_its = 5 314: max_feval = 5 314: BSPLINE XFORM HEADER 314: vox_per_rgn = 11 11 11 314: roi_offset = 0 0 0 314: roi_dim = 19 19 19 314: img_dc = 1 0 0 0 1 0 0 0 1 314: BST METRICS 314: MET 110100 MSE 1.000000 314: Setting nmax, mmax = 375 21 314: >>> START 314: This problem is unconstrained. 314: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.028 s ] 314: CMIN 0.00 CAVG 0.00 CMAX 0.00 314: LSD 0.00 314: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.072 s ] 314: CMIN -0.07 CAVG 0.01 CMAX 0.68 314: LSD 1.00 314: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.103 s ] 314: CMIN -0.35 CAVG 0.05 CMAX 3.40 314: LSD 5.00 314: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.067 s ] 314: CMIN -1.48 CAVG 0.20 CMAX 14.26 314: LSD 21.00 314: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.078 s ] 314: CMIN -1.74 CAVG 0.44 CMAX 32.50 314: LSD 27.95 314: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.070 s ] 314: CMIN -1.73 CAVG 0.34 CMAX 23.99 314: LSD 13.11 314: [2] xf_out->m_type = 9, xf_in->m_type = 0 314: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 314: bspline_xform_initialize 314: rdims = (2,2,2) 314: vox_per_rgn = (22,22,22) 314: cdims = (5 5 5) 314: ** Registration worker thread finished. 314: Writing transformation ... 314: Warping... 314: Running: plm_warp_native 314: Converting input image... 314: Converting xform... 314: bspline_xform_initialize 314: rdims = (2,2,2) 314: vox_per_rgn = (22,22,22) 314: cdims = (5 5 5) 314: Creating output vf... 314: Creating output volume... 314: Running native warper... 314: bspline_warp complete. 314: Back convert to original type... 314: > Convert vf to itk 314: > Conversion complete. 314: plm_warp_native is complete. 314: Saving image... 314: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-img.mha 314: Saving vf... 314: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-vf.mha 314: Load: 0.0848191 314: Run: 0.502865 314: Save: 0.111803 314: Total: 0.699487 314: Finished! 314: 314: STDERR: 314: Not an error 474: RETVAL: 0 474: STDOUT: Time = 0.001811 seconds 474: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png 474: 474: STDERR: 116/578 Test #456: plm-resample-a ........................ Passed 0.39 sec 474: Not an error test 509 Start 509: plm-warp-c 509: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--algorithm;itk;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha;--interpolation;nn;--default-value;0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 509: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 509: Test timeout computed to be: 1500 117/578 Test #388: plm-bsp-landmark-e .................... Passed 0.93 sec test 512 Start 512: plm-warp-d 512: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha;--interpolation;nn;--default-value;0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 512: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 512: Test timeout computed to be: 1500 118/578 Test #314: plm-bsp-mse-g ......................... Passed 1.14 sec 119/578 Test #474: plm-thumbnail-a ....................... Passed 0.37 sec test 515 Start 515: plm-warp-f 515: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd;--default-value;0;--harden-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 515: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 515: Test timeout computed to be: 1500 test 518 Start 518: plm-warp-g 518: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd;--default-value;0;--resample-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 518: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 518: Test timeout computed to be: 1500 512: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 512: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha;--interpolation;nn;--default-value;0 512: EXPECTED_ERRNO is 340: RETVAL: 0 340: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 340: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-3.mha 340: Launching registration worker thread 340: Inside registration worker thread 340: Doing registration stage 340: [1] xf_in->m_type = 0, xf_out->m_type = 0 340: RESAMPLE 1 1: (1 1 1), (1 1 1) 340: RESAMPLE 1 1: (1 1 1), (1 1 1) 340: volume_calc_grad complete. 340: bspline_xform_initialize 340: rdims = (3,3,3) 340: vox_per_rgn = (15,15,15) 340: cdims = (6 6 6) 340: Algorithm flavor = c 340: Threading = 0 340: >> Checking JH allocation 340: >> Performing JH allocation 340: BSPLINE PARMS 340: max_its = 10 340: max_feval = 10 340: BSPLINE XFORM HEADER 340: vox_per_rgn = 15 15 15 340: roi_offset = 0 0 0 340: roi_dim = 38 38 38 340: img_dc = 1 0 0 0 1 0 0 0 1 340: BST METRICS 340: MET 110100 MI 1.000000 340: >> Performing JH initialization 340: Using alpha_0 (1.000000) 340: [ 0, 0] MI -0.3659457 NV 54872 GM -0.007 GN 0.00788 [ 0.065 s ] 340: CMIN 0.01 CAVG 0.01 CMAX 0.01 340: [ 0, 1] MI -0.3699214 NV 54872 GM -0.056 GN 0.00867 [ 0.073 s ] 340: CMIN -0.21 CAVG 0.01 CMAX 0.30 340: GR 0.50 NEW_A 1.00 ACCEPT? 1 340: [ 1, 2] MI -0.3777946 NV 54872 GM -0.049 GN 0.00903 [ 0.068 s ] 340: CMIN -0.23 CAVG 0.02 CMAX 0.69 340: GR 0.91 NEW_A 3.00 ACCEPT? 1 340: [ 2, 3] MI -0.4137608 NV 54753 GM -0.063 GN 0.017 [ 0.079 s ] 340: CMIN -0.35 CAVG 0.05 CMAX 2.09 340: GR 3.98 NEW_A 9.00 ACCEPT? 1 340: [ 3, 4] MI -0.5521525 NV 53587 GM -0.081 GN 0.017 [ 0.072 s ] 340: CMIN -0.97 CAVG 0.10 CMAX 7.08 340: GR 8.16 NEW_A 27.00 ACCEPT? 1 340: [ 4, 5] MI -1.2166027 NV 49761 GM -0.031 GN 0.0276 [ 0.075 s ] 340: CMIN -2.22 CAVG 0.30 CMAX 20.76 340: GR 38.97 NEW_A 81.00 ACCEPT? 1 340: [ 5, 6] MI -0.4035923 NV 36457 GM -0.029 GN 0.0114 [ 0.084 s ] 340: CMIN -26.58 CAVG 0.44 CMAX 33.14 340: GR -29.50 NEW_A 40.50 ACCEPT? 0 340: [ 5, 7] MI -0.7946788 NV 43303 GM -0.068 GN 0.0215 [ 0.107 s ] 340: CMIN -14.21 CAVG 0.37 CMAX 26.12 340: GR -15.31 NEW_A 20.25 ACCEPT? 0 340: [ 5, 8] MI -1.1523657 NV 46825 GM -0.160 GN 0.031 [ 0.148 s ] 340: CMIN -8.02 CAVG 0.33 CMAX 23.44 340: GR -2.33 NEW_A 10.12 ACCEPT? 0 340: [ 5, 9] MI -1.3108922 NV 48385 GM -0.176 GN 0.0266 [ 0.242 s ] 340: CMIN -4.93 CAVG 0.31 CMAX 22.10 340: GR 3.42 NEW_A 30.38 ACCEPT? 1 340: [ 6, 10] MI -0.7927921 NV 46839 GM 0.149 GN 0.0234 [ 0.146 s ] 340: CMIN -2.23 CAVG 0.62 CMAX 17.80 340: GR -19.50 NEW_A 15.19 ACCEPT? 0 340: [2] xf_out->m_type = 9, xf_in->m_type = 0 340: ** Registration worker thread finished. 340: Writing transformation ... 340: Warping... 340: Running: plm_warp_native 340: Converting input image... 340: Converting xform... 340: bspline_xform_initialize 340: rdims = (3,3,3) 340: vox_per_rgn = (15,15,15) 340: cdims = (6 6 6) 340: Creating output vf... 340: Creating output volume... 340: Running native warper... 340: bspline_warp complete. 340: Back convert to original type... 340: > Convert vf to itk 340: > Conversion complete. 340: plm_warp_native is complete. 340: Saving image... 340: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-img.mha 340: Saving vf... 340: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-vf.mha 340: Load: 0.0719991 340: Run: 1.17074 340: Save: 0.071054 340: Total: 1.31379 340: Finished! 340: 340: STDERR: 340: Not an error 459: RETVAL: 0 459: STDOUT: Time = 0.003463 seconds 459: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha 459: 459: STDERR: 459: Not an error 120/578 Test #340: plm-bsp-mi-c-2 ........................ Passed 1.66 sec 504: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 504: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha;--default-value;0 504: EXPECTED_ERRNO is test 462 Start 462: plm-resample-c 462: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=resample;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-vf.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 462: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 462: Test timeout computed to be: 1500 495: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 495: PARMS is threshold;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha;--range;-900,-888 495: EXPECTED_ERRNO is 509: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 509: PARMS is warp;--algorithm;itk;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha;--interpolation;nn;--default-value;0 509: EXPECTED_ERRNO is 121/578 Test #459: plm-resample-b ........................ Passed 0.45 sec test 521 Start 521: plm-warp-h 521: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd;--default-value;0;--resample-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 521: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 521: Test timeout computed to be: 1500 369: RETVAL: 0 369: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 369: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha 369: Launching registration worker thread 369: Inside registration worker thread 369: Doing registration stage 369: [1] xf_in->m_type = 0, xf_out->m_type = 0 369: RESAMPLE 1 1: (1 1 1), (1 1 1) 369: RESAMPLE 1 1: (1 1 1), (1 1 1) 369: volume_calc_grad complete. 369: bspline_xform_initialize 369: Warning: vox_per_rgn was less than 4. 369: Warning: vox_per_rgn was less than 4. 369: Warning: vox_per_rgn was less than 4. 369: rdims = (10,10,10) 369: vox_per_rgn = (4,4,4) 369: cdims = (13 13 13) 369: Algorithm flavor = g 369: Threading = 0 369: >> Checking JH allocation 369: BSPLINE PARMS 369: max_its = 5 369: max_feval = 5 369: BSPLINE XFORM HEADER 369: vox_per_rgn = 4 4 4 369: roi_offset = 0 0 0 369: roi_dim = 38 38 38 369: img_dc = 1 0 0 0 1 0 0 0 1 369: BST METRICS 369: MET 110100 MSE 1.000000 369: Setting nmax, mmax = 6591 83 369: >>> START 369: This problem is unconstrained. 369: [ 0, 0] MSE 5540.166 NV 54872 GM 0.000 GN 28.2 [ 0.098 s ] 369: CMIN 0.00 CAVG 0.00 CMAX 0.00 369: LSD 0.00 369: [ 0, 1] MSE 5484.124 NV 54872 GM 0.045 GN 27.8 [ 0.048 s ] 369: CMIN -0.16 CAVG -0.00 CMAX 0.22 369: LSD 1.00 369: [ 0, 2] MSE 5266.236 NV 54872 GM 0.224 GN 26.4 [ 0.095 s ] 369: CMIN -0.81 CAVG 0.00 CMAX 1.12 369: LSD 5.00 369: [ 0, 3] MSE 4484.536 NV 54872 GM 0.928 GN 20.9 [ 0.049 s ] 369: CMIN -3.39 CAVG 0.00 CMAX 4.70 369: LSD 21.00 369: [ 1, 4] MSE 2493.238 NV 54872 GM 0.677 GN 15.1 [ 0.134 s ] 369: CMIN -13.49 CAVG -0.00 CMAX 18.05 369: LSD 60.54 369: [ 2, 5] MSE 4765.919 NV 54872 GM 81.679 GN 34.3 [ 0.089 s ] 369: CMIN -43.65 CAVG -0.01 CMAX 57.84 369: LSD 218.24 369: [2] xf_out->m_type = 9, xf_in->m_type = 0 369: ** Registration worker thread finished. 369: Writing transformation ... 369: Warping... 369: Running: plm_warp_native 369: Converting input image... 369: Converting xform... 369: bspline_xform_initialize 369: rdims = (10,10,10) 369: vox_per_rgn = (4,4,4) 369: cdims = (13 13 13) 369: Creating output vf... 369: Creating output volume... 369: Running native warper... 369: bspline_warp complete. 369: Back convert to original type... 369: > Convert vf to itk 369: > Conversion complete. 369: plm_warp_native is complete. 369: Saving image... 369: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-img.mha 369: Saving vf... 369: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-vf.mha 369: Load: 0.0779428 369: Run: 0.523587 369: Save: 0.092247 369: Total: 0.693777 369: Finished! 369: 369: STDERR: 369: Not an error 122/578 Test #369: plm-bsp-regularize-none ............... Passed 1.10 sec 382: RETVAL: 0 382: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-15.mha 382: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-16.mha 382: Launching registration worker thread 382: Inside registration worker thread 382: Loading fixed landmarks: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv 382: Loading moving landmarks: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv 382: Doing registration stage 382: [1] xf_in->m_type = 0, xf_out->m_type = 0 382: RESAMPLE 1 1: (2 2 2), (2 2 2) 382: RESAMPLE 1 1: (2 2 2), (2 2 2) 382: volume_calc_grad complete. 382: bspline_xform_initialize 382: Warning: vox_per_rgn was less than 4. 382: Warning: vox_per_rgn was less than 4. 382: Warning: vox_per_rgn was less than 4. 382: rdims = (5,5,5) 382: vox_per_rgn = (4,4,4) 382: cdims = (8 8 8) 382: Algorithm flavor = h 382: Threading = 0 382: Landmarks: 8 fixed, 8 moving, lambda = 1.000000 382: >> Checking JH allocation 382: Computing landmark grid coordinates 382: image dc=-1 0 0 0 -1 0 0 0 1 382: image or=250 250 -236.842 382: image dm=19 19 19 382: [0], (-51.7821 -52.1629 46.0528) -> (11.467712 11.482183 10.750000) 382: [1], (52.5439 -52.1629 46.053) -> (7.503327 11.482183 10.750008) 382: [2], (53.3054 53.6862 46.053) -> (7.474390 7.459919 10.750008) 382: [3], (-52.5436 52.9247 46.053) -> (11.496650 7.488857 10.750008) 382: [4], (-52.5436 -52.1629 -46.0525) -> (11.496650 11.482183 7.250000) 382: [5], (53.3054 -51.7821 -46.053) -> (7.474390 11.467712 7.249981) 382: [6], (52.1632 53.3054 -46.053) -> (7.517794 7.474390 7.249981) 382: [7], (-52.9244 53.3054 -46.053) -> (11.511120 7.474390 7.249981) 382: BSPLINE PARMS 382: max_its = 5 382: max_feval = 5 382: BSPLINE XFORM HEADER 382: vox_per_rgn = 4 4 4 382: roi_offset = 0 0 0 382: roi_dim = 19 19 19 382: img_dc = -1 0 0 0 -1 0 0 0 1 382: BST METRICS 382: MET 110100 MSE 1.000000 382: Setting nmax, mmax = 1536 41 382: >>> START 382: This problem is unconstrained. 382: [ 0, 0] SCORE 1785.722 NV 6859 GM -104.585 GN 27.6 [ 0.005 s ] 382: MSE 1339.480 LM 446.242 382: CMIN 0.00 CAVG 0.00 CMAX 0.00 382: LSD 0.00 382: [ 0, 1] SCORE 1740.786 NV 6859 GM -103.163 GN 27.2 [ 0.003 s ] 382: MSE 1303.402 LM 437.384 382: CMIN -0.03 CAVG 0.00 CMAX 0.57 382: LSD 1.00 382: [ 0, 2] SCORE 1567.600 NV 6859 GM -97.477 GN 25.7 [ 0.004 s ] 382: MSE 1164.662 LM 402.938 382: CMIN -0.17 CAVG 0.01 CMAX 2.86 382: LSD 5.00 382: [ 0, 3] SCORE 979.240 NV 6859 GM -74.784 GN 19.7 [ 0.004 s ] 382: MSE 698.326 LM 280.914 382: CMIN -0.71 CAVG 0.05 CMAX 12.03 382: LSD 21.00 382: [ 1, 4] SCORE 118.835 NV 6859 GM 0.596 GN 3.68 [ 0.004 s ] 382: MSE 81.402 LM 37.433 382: CMIN -1.76 CAVG 0.19 CMAX 39.56 382: LSD 55.80 382: [ 2, 5] SCORE 69.736 NV 6859 GM 2.657 GN 2.64 [ 0.004 s ] 382: MSE 47.343 LM 22.393 382: CMIN -3.07 CAVG 0.19 CMAX 44.32 382: LSD 10.82 382: [2] xf_out->m_type = 9, xf_in->m_type = 0 382: Warping... 382: Running: plm_warp_native 382: Converting input image... 382: Converting xform... 382: bspline_xform_initialize 382: rdims = (5,5,5) 382: vox_per_rgn = (8,8,8) 382: cdims = (8 8 8) 382: Creating output vf... 382: Creating output volume... 382: Running native warper... 382: bspline_warp complete. 382: > Convert vf to itk 382: > Conversion complete. 382: plm_warp_native is complete. 382: Saving warped landmarks... 382: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-warped.fcsv 382: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 382: bspline_xform_initialize 382: rdims = (5,5,5) 382: vox_per_rgn = (8,8,8) 382: cdims = (8 8 8) 382: ** Registration worker thread finished. 382: Writing transformation ... 382: Warping... 382: Running: plm_warp_native 382: Converting input image... 382: Converting xform... 382: bspline_xform_initialize 382: rdims = (5,5,5) 382: vox_per_rgn = (8,8,8) 382: cdims = (8 8 8) 382: Creating output vf... 382: Creating output volume... 382: Running native warper... 382: bspline_warp complete. 382: Back convert to original type... 382: > Convert vf to itk 382: > Conversion complete. 382: plm_warp_native is complete. 382: Saving image... 382: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-img.mha 382: Saving vf... 382: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-vf.mha 382: Load: 0.307264 382: Run: 0.180767 382: Save: 0.0981479 382: Total: 0.586179 382: Finished! 382: 382: STDERR: test 524 Start 524: plm-warp-i 524: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd;--default-value;0;--resample-linear-xf" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 524: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 524: Test timeout computed to be: 1500 382: Not an error 515: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 515: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd;--default-value;0;--harden-linear-xf 515: EXPECTED_ERRNO is 501: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 501: PARMS is warp;--algorithm;itk;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt;--output-vf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha 501: EXPECTED_ERRNO is 123/578 Test #382: plm-bsp-landmark-c .................... Passed 1.06 sec 518: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 518: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-affine-a.tfm;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd;--default-value;0;--resample-linear-xf 518: EXPECTED_ERRNO is test 527 Start 527: plm-xf-convert-a 527: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125;" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 527: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 527: Test timeout computed to be: 1500 483: RETVAL: 0 483: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha 483: 483: STDERR: 483: Not an error 521: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 521: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-ushort-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd;--default-value;0;--resample-linear-xf 521: EXPECTED_ERRNO is 444: RETVAL: 0 444: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha 444: Finished! 444: 444: STDERR: 444: Not an error 436: RETVAL: 0 436: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 436: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 436: Launching registration worker thread 436: Inside registration worker thread 436: Doing registration stage 436: [1] xf_in->m_type = 0, xf_out->m_type = 0 436: RESAMPLE 2 1: (3 3 3), (3 3 3) 436: RESAMPLE 2 1: (3 3 3), (3 3 3) 436: volume_calc_grad complete. 436: Computing grid search extent. 436: Dimension 0, mo=0.8 F=(-25, 51) M=(-25, 51) 436: Dimension 1, mo=0.8 F=(-25, 51) M=(-25, 51) 436: Dimension 2, mo=0.8 F=(-25, 51) M=(-25, 51) 436: Native grid search extent: (-10.2, 10.2), (-10.2, 10.2), (-10.2, 10.2) 436: [0 0 0] 17783.3 * 436: Global grid search 436: [-10.2 -10.2 -10.2] 92384.1 436: [-6.12 -10.2 -10.2] 83802.1 436: [-2.04 -10.2 -10.2] 69480.8 436: [2.04 -10.2 -10.2] 58333.1 436: [6.12 -10.2 -10.2] 54296.4 436: [10.2 -10.2 -10.2] 54999.5 436: [-10.2 -6.12 -10.2] 82405.6 436: [-6.12 -6.12 -10.2] 72624.1 436: [-2.04 -6.12 -10.2] 57400.6 436: [2.04 -6.12 -10.2] 44980.1 436: [6.12 -6.12 -10.2] 39080.6 436: [10.2 -6.12 -10.2] 38440 436: [-10.2 -2.04 -10.2] 74449.5 436: [-6.12 -2.04 -10.2] 64281.8 436: [-2.04 -2.04 -10.2] 49076.9 436: [2.04 -2.04 -10.2] 36415.9 436: [6.12 -2.04 -10.2] 29734.1 436: [10.2 -2.04 -10.2] 28403 436: [-10.2 2.04 -10.2] 74429.6 436: [-6.12 2.04 -10.2] 64267.5 436: [-2.04 2.04 -10.2] 49066.9 436: [2.04 2.04 -10.2] 36408.4 436: [6.12 2.04 -10.2] 29728.1 436: [10.2 2.04 -10.2] 28397.5 436: [-10.2 6.12 -10.2] 82364.6 436: [-6.12 6.12 -10.2] 72609.5 436: [-2.04 6.12 -10.2] 57395.9 436: [2.04 6.12 -10.2] 44976.1 436: [6.12 6.12 -10.2] 39078.9 436: [10.2 6.12 -10.2] 38440.1 436: [-10.2 10.2 -10.2] 92397.6 436: [-6.12 10.2 -10.2] 83916.7 436: [-2.04 10.2 -10.2] 69619.2 436: [2.04 10.2 -10.2] 58464.4 436: [6.12 10.2 -10.2] 54439.9 436: [10.2 10.2 -10.2] 55157.8 436: [-10.2 -10.2 -6.12] 82405.6 436: [-6.12 -10.2 -6.12] 72624.1 436: [-2.04 -10.2 -6.12] 57400.6 436: [2.04 -10.2 -6.12] 44980.1 436: [6.12 -10.2 -6.12] 39080.6 436: [10.2 -10.2 -6.12] 38440 436: [-10.2 -6.12 -6.12] 72448.6 436: [-6.12 -6.12 -6.12] 61337.3 436: [-2.04 -6.12 -6.12] 45076.3 436: [2.04 -6.12 -6.12] 31252.4 436: [6.12 -6.12 -6.12] 23367.4 436: [10.2 -6.12 -6.12] 21314.6 436: [-10.2 -2.04 -6.12] 64832.7 436: [-6.12 -2.04 -6.12] 53317.9 436: [-2.04 -2.04 -6.12] 37043.2 436: [2.04 -2.04 -6.12] 22959.6 436: [6.12 -2.04 -6.12] 14296.9 * 436: [10.2 -2.04 -6.12] 11566.7 * 436: [-10.2 2.04 -6.12] 64815.2 436: [-6.12 2.04 -6.12] 53306.1 436: [-2.04 2.04 -6.12] 37035.8 436: [2.04 2.04 -6.12] 22954.9 436: [6.12 2.04 -6.12] 14294.1 436: [10.2 2.04 -6.12] 11564.7 * 436: [-10.2 6.12 -6.12] 72412.3 436: [-6.12 6.12 -6.12] 61325.8 436: [-2.04 6.12 -6.12] 45074.1 436: [2.04 6.12 -6.12] 31250.7 436: [6.12 6.12 -6.12] 23367.9 436: [10.2 6.12 -6.12] 21317 436: [-10.2 10.2 -6.12] 82423.5 436: [-6.12 10.2 -6.12] 72736.2 436: [-2.04 10.2 -6.12] 57532.8 436: [2.04 10.2 -6.12] 45103.1 436: [6.12 10.2 -6.12] 39213.4 436: [10.2 10.2 -6.12] 38586 436: [-10.2 -10.2 -2.04] 74449.5 436: [-6.12 -10.2 -2.04] 64281.8 436: [-2.04 -10.2 -2.04] 49076.9 436: [2.04 -10.2 -2.04] 36415.9 436: [6.12 -10.2 -2.04] 29734.1 436: [10.2 -10.2 -2.04] 28403 436: [-10.2 -6.12 -2.04] 64832.7 436: [-6.12 -6.12 -2.04] 53317.9 436: [-2.04 -6.12 -2.04] 37043.2 436: [2.04 -6.12 -2.04] 22959.6 436: [6.12 -6.12 -2.04] 14296.9 436: [10.2 -6.12 -2.04] 11566.7 436: [-10.2 -2.04 -2.04] 57654.9 436: [-6.12 -2.04 -2.04] 45747.8 436: [-2.04 -2.04 -2.04] 29445.1 436: [2.04 -2.04 -2.04] 15101.1 436: [6.12 -2.04 -2.04] 5691.26 * 436: [10.2 -2.04 -2.04] 2314.87 * 436: [-10.2 2.04 -2.04] 57639 436: [-6.12 2.04 -2.04] 45737.4 436: [-2.04 2.04 -2.04] 29439 436: [2.04 2.04 -2.04] 15097.8 436: [6.12 2.04 -2.04] 5689.94 436: [10.2 2.04 -2.04] 2314.41 * 436: [-10.2 6.12 -2.04] 64797.7 436: [-6.12 6.12 -2.04] 53306.2 436: [-2.04 6.12 -2.04] 37040 436: [2.04 6.12 -2.04] 22956.8 436: [6.12 6.12 -2.04] 14296.1 436: [10.2 6.12 -2.04] 11567.5 436: [-10.2 10.2 -2.04] 74459.9 436: [-6.12 10.2 -2.04] 64378.9 436: [-2.04 10.2 -2.04] 49191.7 436: [2.04 10.2 -2.04] 36520.8 436: [6.12 10.2 -2.04] 29846.4 436: [10.2 10.2 -2.04] 28526.5 436: [-10.2 -10.2 2.04] 74429.6 436: [-6.12 -10.2 2.04] 64267.5 436: [-2.04 -10.2 2.04] 49066.9 436: [2.04 -10.2 2.04] 36408.4 436: [6.12 -10.2 2.04] 29728.1 436: [10.2 -10.2 2.04] 28397.6 436: [-10.2 -6.12 2.04] 64815.2 436: [-6.12 -6.12 2.04] 53306.1 436: [-2.04 -6.12 2.04] 37035.8 436: [2.04 -6.12 2.04] 22954.9 436: [6.12 -6.12 2.04] 14294.1 436: [10.2 -6.12 2.04] 11564.7 436: [-10.2 -2.04 2.04] 57639 436: [-6.12 -2.04 2.04] 45737.4 436: [-2.04 -2.04 2.04] 29439 436: [2.04 -2.04 2.04] 15097.8 436: [6.12 -2.04 2.04] 5689.94 436: [10.2 -2.04 2.04] 2314.41 436: [-10.2 2.04 2.04] 57623.1 436: [-6.12 2.04 2.04] 45727.1 436: [-2.04 2.04 2.04] 29432.9 436: [2.04 2.04 2.04] 15094.5 436: [6.12 2.04 2.04] 5688.65 436: [10.2 2.04 2.04] 2313.97 * 436: [-10.2 6.12 2.04] 64780.4 436: [-6.12 6.12 2.04] 53294.5 436: [-2.04 6.12 2.04] 37032.7 436: [2.04 6.12 2.04] 22952.3 436: [6.12 6.12 2.04] 14293.5 436: [10.2 6.12 2.04] 11565.7 436: [-10.2 10.2 2.04] 74440.3 436: [-6.12 10.2 2.04] 64365 436: [-2.04 10.2 2.04] 49182.1 436: [2.04 10.2 2.04] 36513.6 436: [6.12 10.2 2.04] 29840.9 436: [10.2 10.2 2.04] 28521.4 436: [-10.2 -10.2 6.12] 82364.6 436: [-6.12 -10.2 6.12] 72609.5 436: [-2.04 -10.2 6.12] 57395.9 436: [2.04 -10.2 6.12] 44976.1 436: [6.12 -10.2 6.12] 39078.9 436: [10.2 -10.2 6.12] 38440.1 436: [-10.2 -6.12 6.12] 72412.2 436: [-6.12 -6.12 6.12] 61325.8 436: [-2.04 -6.12 6.12] 45074.1 436: [2.04 -6.12 6.12] 31250.7 436: [6.12 -6.12 6.12] 23367.9 436: [10.2 -6.12 6.12] 21317 436: [-10.2 -2.04 6.12] 64797.7 436: [-6.12 -2.04 6.12] 53306.2 436: [-2.04 -2.04 6.12] 37040 436: [2.04 -2.04 6.12] 22956.8 436: [6.12 -2.04 6.12] 14296.1 436: [10.2 -2.04 6.12] 11567.5 436: [-10.2 2.04 6.12] 64780.3 436: [-6.12 2.04 6.12] 53294.5 436: [-2.04 2.04 6.12] 37032.7 436: [2.04 2.04 6.12] 22952.3 436: [6.12 2.04 6.12] 14293.5 436: [10.2 2.04 6.12] 11565.7 436: [-10.2 6.12 6.12] 72376.5 436: [-6.12 6.12 6.12] 61315 436: [-2.04 6.12 6.12] 45072.4 436: [2.04 6.12 6.12] 31249.7 436: [6.12 6.12 6.12] 23369.2 436: [10.2 6.12 6.12] 21320.2 436: [-10.2 10.2 6.12] 82385 436: [-6.12 10.2 6.12] 72724.1 436: [-2.04 10.2 6.12] 57530.6 436: [2.04 10.2 6.12] 45101.8 436: [6.12 10.2 6.12] 39214.6 436: [10.2 10.2 6.12] 38589.1 436: [-10.2 -10.2 10.2] 92397.6 436: [-6.12 -10.2 10.2] 83916.7 436: [-2.04 -10.2 10.2] 69619.2 436: [2.04 -10.2 10.2] 58464.4 436: [6.12 -10.2 10.2] 54439.9 436: [10.2 -10.2 10.2] 55157.8 436: [-10.2 -6.12 10.2] 82423.5 436: [-6.12 -6.12 10.2] 72736.1 436: [-2.04 -6.12 10.2] 57532.8 436: [2.04 -6.12 10.2] 45103.1 436: [6.12 -6.12 10.2] 39213.4 436: [10.2 -6.12 10.2] 38586 436: [-10.2 -2.04 10.2] 74459.9 436: [-6.12 -2.04 10.2] 64378.9 436: [-2.04 -2.04 10.2] 49191.7 436: [2.04 -2.04 10.2] 36520.8 436: [6.12 -2.04 10.2] 29846.4 436: [10.2 -2.04 10.2] 28526.5 436: [-10.2 2.04 10.2] 74440.3 436: [-6.12 2.04 10.2] 64365 436: [-2.04 2.04 10.2] 49182.1 436: [2.04 2.04 10.2] 36513.6 436: [6.12 2.04 10.2] 29840.9 436: [10.2 2.04 10.2] 28521.4 436: [-10.2 6.12 10.2] 82385 436: [-6.12 6.12 10.2] 72724.1 436: [-2.04 6.12 10.2] 57530.6 436: [2.04 6.12 10.2] 45101.8 436: [6.12 6.12 10.2] 39214.6 436: [10.2 6.12 10.2] 38589.1 436: [-10.2 10.2 10.2] 92421.5 436: [-6.12 10.2 10.2] 84042.5 436: [-2.04 10.2 10.2] 69768.6 436: [2.04 10.2 10.2] 58606.7 436: [6.12 10.2 10.2] 54595.3 436: [10.2 10.2 10.2] 55328.8 436: [2] xf_out->m_type = 1, xf_in->m_type = 0 436: ** Registration worker thread finished. 436: Warping... 436: plm_warp_itk: xform_to_itk_vf 436: plm_warp_itk: convert_to_itk 436: plm_warp_itk: warping... 436: Saving image... 436: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.mha 436: Load: 0.167277 436: Run: 0.113207 436: Save: 0.0179591 436: Total: 0.298443 436: Finished! 436: 436: STDERR: 436: Not an error 124/578 Test #444: plm-compose-a ......................... Passed 0.55 sec 125/578 Test #483: plm-intersect ......................... Passed 0.44 sec test 531 Start 531: plm-xf-convert-d-warp-1 531: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-xf-convert.txt;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 531: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 531: Test timeout computed to be: 1500 test 534 Start 534: plm-xf-convert-d-warp-2 534: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 534: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 534: Test timeout computed to be: 1500 126/578 Test #436: plm-reg-autores-a ..................... Passed 0.76 sec test 540 Start 540: plm-xf-convert-h 540: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-h" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;vf" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 540: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 540: Test timeout computed to be: 1500 527: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 527: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125; 527: EXPECTED_ERRNO is 462: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 462: PARMS is resample;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-vf.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/black-1.mha 462: EXPECTED_ERRNO is 524: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 524: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-translation-1.txt;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-double-1.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd;--default-value;0;--resample-linear-xf 524: EXPECTED_ERRNO is 534: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 534: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd 534: EXPECTED_ERRNO is 531: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 531: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-xf-convert.txt;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd 531: EXPECTED_ERRNO is 448: RETVAL: 0 102: RETVAL: 0 102: STDOUT: Rendering DRR 0 102: I/O time: 0.000393 sec 102: Rendering DRR 1 102: I/O time: 0.000454 sec 102: Rendering DRR 2 102: I/O time: 0.000419 sec 102: Rendering DRR 3 102: I/O time: 0.000753 sec 102: Rendering DRR 4 102: I/O time: 0.000344 sec 102: Rendering DRR 5 102: I/O time: 0.000420 sec 102: Rendering DRR 6 102: I/O time: 0.000375 sec 102: Rendering DRR 7 102: I/O time: 0.000441 sec 102: Rendering DRR 8 102: I/O time: 0.000244 sec 102: Rendering DRR 9 102: I/O time: 0.000330 sec 102: Rendering DRR 10 102: I/O time: 0.000346 sec 102: Rendering DRR 11 102: I/O time: 0.000325 sec 102: Rendering DRR 12 102: I/O time: 0.000335 sec 102: Rendering DRR 13 102: I/O time: 0.000339 sec 102: Rendering DRR 14 102: I/O time: 0.000389 sec 102: Rendering DRR 15 102: I/O time: 0.000353 sec 102: Rendering DRR 16 102: I/O time: 0.000329 sec 102: Rendering DRR 17 102: I/O time: 0.000338 sec 102: Rendering DRR 18 102: I/O time: 0.000340 sec 102: Rendering DRR 19 102: I/O time: 0.000439 sec 102: Total time: 1.35022 secs 102: 102: STDERR: 448: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha 448: Finished! 448: 448: STDERR: 102: Not an error 403: RETVAL: 0 403: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 403: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha 403: Launching registration worker thread 403: Inside registration worker thread 403: Doing registration stage 403: [1] xf_in->m_type = 0, xf_out->m_type = 0 403: RESAMPLE 1 1: (2 2 2), (2 2 2) 403: RESAMPLE 1 1: (2 2 2), (2 2 2) 403: volume_calc_grad complete. 403: bspline_xform_initialize 403: Warning: vox_per_rgn was less than 4. 403: Warning: vox_per_rgn was less than 4. 403: Warning: vox_per_rgn was less than 4. 403: rdims = (5,5,5) 403: vox_per_rgn = (4,4,4) 403: cdims = (8 8 8) 403: Algorithm flavor = h 403: Threading = 0 403: >> Checking JH allocation 403: BSPLINE PARMS 403: max_its = 5 403: max_feval = 5 403: BSPLINE XFORM HEADER 403: vox_per_rgn = 4 4 4 403: roi_offset = 0 0 0 403: roi_dim = 19 19 19 403: img_dc = 1 0 0 0 1 0 0 0 1 403: BST METRICS 403: MET 110100 MSE 1.000000 403: Setting nmax, mmax = 1536 41 403: >>> START 403: This problem is unconstrained. 403: [ 0, 0] MSE 1969.037 NV 5719 GM 151.518 GN 29 [ 0.021 s ] 403: CMIN 0.00 CAVG 0.00 CMAX 0.00 403: LSD 0.00 403: [ 0, 1] MSE 1948.891 NV 5719 GM 150.797 GN 28.8 [ 0.009 s ] 403: CMIN -0.42 CAVG -0.00 CMAX 0.04 403: LSD 1.00 403: [ 0, 2] MSE 1873.200 NV 5719 GM 152.313 GN 29.2 [ 0.008 s ] 403: CMIN -2.08 CAVG -0.02 CMAX 0.22 403: LSD 5.00 403: [ 0, 3] MSE 1636.130 NV 5719 GM 148.988 GN 28.8 [ 0.016 s ] 403: CMIN -8.76 CAVG -0.07 CMAX 0.93 403: LSD 21.00 403: [ 0, 4] MSE 1351.434 NV 5719 GM 79.112 GN 23.8 [ 0.009 s ] 403: CMIN -35.44 CAVG -0.29 CMAX 3.78 403: LSD 85.00 403: [ 1, 5] MSE 6291.438 NV 5719 GM -73.340 GN 33.2 [ 0.005 s ] 403: CMIN -126.28 CAVG -0.93 CMAX 14.98 403: LSD 199.65 403: [2] xf_out->m_type = 9, xf_in->m_type = 0 403: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 403: bspline_xform_initialize 403: rdims = (5,5,5) 403: vox_per_rgn = (8,8,8) 403: cdims = (8 8 8) 403: ** Registration worker thread finished. 403: Writing transformation ... 403: Warping... 403: Running: plm_warp_native 403: Converting input image... 403: Converting xform... 403: bspline_xform_initialize 403: rdims = (5,5,5) 403: vox_per_rgn = (8,8,8) 403: cdims = (8 8 8) 403: Creating output vf... 403: Creating output volume... 403: Running native warper... 403: bspline_warp complete. 403: Back convert to original type... 403: > Convert vf to itk 403: > Conversion complete. 403: plm_warp_native is complete. 403: Saving image... 403: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-img.nrrd 403: Saving vf... 403: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-vf.nrrd 403: Load: 0.0517981 403: Run: 0.098958 403: Save: 0.255126 403: Total: 0.405882 403: Finished! 403: 403: STDERR: 403: Not an error 105: RETVAL: 0 105: STDOUT: Rendering DRR 0 105: I/O time: 0.000494 sec 105: Rendering DRR 1 105: I/O time: 0.000383 sec 105: Rendering DRR 2 105: I/O time: 0.000485 sec 105: Rendering DRR 3 105: I/O time: 0.000347 sec 105: Rendering DRR 4 105: I/O time: 0.000340 sec 105: Rendering DRR 5 105: I/O time: 0.000373 sec 105: Rendering DRR 6 105: I/O time: 0.000354 sec 105: Rendering DRR 7 105: I/O time: 0.000345 sec 105: Rendering DRR 8 105: I/O time: 0.000317 sec 105: Rendering DRR 9 105: I/O time: 0.000344 sec 105: Rendering DRR 10 105: I/O time: 0.000345 sec 105: Rendering DRR 11 105: I/O time: 0.000384 sec 105: Rendering DRR 12 105: I/O time: 0.000338 sec 105: Rendering DRR 13 105: I/O time: 0.000338 sec 105: Rendering DRR 14 105: I/O time: 0.000388 sec 105: Rendering DRR 15 105: I/O time: 0.000340 sec 105: Rendering DRR 16 105: I/O time: 0.000336 sec 105: Rendering DRR 17 105: I/O time: 0.000363 sec 105: Rendering DRR 18 105: I/O time: 0.000339 sec 105: Rendering DRR 19 105: I/O time: 0.000354 sec 105: Total time: 1.43884 secs 105: 105: STDERR: 105: Not an error 448: Not an error 127/578 Test #105: drr-c ................................. Passed 1.76 sec 128/578 Test #403: plm-bsp-dcos-e ........................ Passed 1.07 sec 129/578 Test #448: plm-compose-b ......................... Passed 0.60 sec test 543 Start 543: plm-xf-convert-i 543: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-i" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd;--output-type;vf" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 543: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 543: Test timeout computed to be: 1500 test 546 Start 546: xf-invert-vf-zero-1 546: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vf-zero-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 546: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 546: Test timeout computed to be: 1500 test 549 Start 549: xf-invert-vf-trans-1 549: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vf-trans-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha;--iterations;10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 549: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 549: Test timeout computed to be: 1500 540: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 540: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--output-type;vf 540: EXPECTED_ERRNO is 130/578 Test #102: drr-b ................................. Passed 1.78 sec test 556 Start 556: proton-dose-1 556: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 556: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 556: Test timeout computed to be: 1500 439: RETVAL: 0 439: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 439: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 439: Launching registration worker thread 439: Inside registration worker thread 439: Doing registration stage 439: [1] xf_in->m_type = 0, xf_out->m_type = 0 439: RESAMPLE 3 1: (0.5 0.5 0.5), (0.5 0.5 0.5) 439: RESAMPLE 3 1: (0.5 0.5 0.5), (0.5 0.5 0.5) 439: volume_calc_grad complete. 439: Computing grid search extent. 439: Dimension 0, mo=0.8 F=(-25, 51.2465) M=(-25, 51.2465) 439: Dimension 1, mo=0.8 F=(-25, 51.2465) M=(-25, 51.2465) 439: Dimension 2, mo=0.8 F=(-25, 51.2465) M=(-25, 51.2465) 439: Native grid search extent: (-10.2493, 10.2493), (-10.2493, 10.2493), (-10.2493, 10.2493) 439: [0 0 0] 17568.3 * 439: Global grid search 439: [-10.2493 -10.2493 -10.2493] 102040 439: [-6.14958 -10.2493 -10.2493] 87035.1 439: [-2.04986 -10.2493 -10.2493] 73504.3 439: [2.04986 -10.2493 -10.2493] 61973.2 439: [6.14958 -10.2493 -10.2493] 57083.1 439: [10.2493 -10.2493 -10.2493] 60324.8 439: [-10.2493 -6.14958 -10.2493] 86358.6 439: [-6.14958 -6.14958 -10.2493] 71329.7 439: [-2.04986 -6.14958 -10.2493] 57402.6 439: [2.04986 -6.14958 -10.2493] 45155 439: [6.14958 -6.14958 -10.2493] 38807.6 439: [10.2493 -6.14958 -10.2493] 39786.3 439: [-10.2493 -2.04986 -10.2493] 79223.6 439: [-6.14958 -2.04986 -10.2493] 64102 439: [-2.04986 -2.04986 -10.2493] 49890.5 439: [2.04986 -2.04986 -10.2493] 37200.4 439: [6.14958 -2.04986 -10.2493] 30089.3 439: [10.2493 -2.04986 -10.2493] 29962.9 439: [-10.2493 2.04986 -10.2493] 79216.3 439: [-6.14958 2.04986 -10.2493] 64097.4 439: [-2.04986 2.04986 -10.2493] 49887.5 439: [2.04986 2.04986 -10.2493] 37198.2 439: [6.14958 2.04986 -10.2493] 30087.7 439: [10.2493 2.04986 -10.2493] 29961.4 439: [-10.2493 6.14958 -10.2493] 86370.3 439: [-6.14958 6.14958 -10.2493] 71349.9 439: [-2.04986 6.14958 -10.2493] 57424.9 439: [2.04986 6.14958 -10.2493] 45174.8 439: [6.14958 6.14958 -10.2493] 38826.9 439: [10.2493 6.14958 -10.2493] 39808.1 439: [-10.2493 10.2493 -10.2493] 101908 439: [-6.14958 10.2493 -10.2493] 86978.3 439: [-2.04986 10.2493 -10.2493] 73484.1 439: [2.04986 10.2493 -10.2493] 61959.1 439: [6.14958 10.2493 -10.2493] 57074.3 439: [10.2493 10.2493 -10.2493] 60322.2 439: [-10.2493 -10.2493 -6.14958] 86358.6 439: [-6.14958 -10.2493 -6.14958] 71329.7 439: [-2.04986 -10.2493 -6.14958] 57402.6 439: [2.04986 -10.2493 -6.14958] 45155 439: [6.14958 -10.2493 -6.14958] 38807.6 439: [10.2493 -10.2493 -6.14958] 39786.3 439: [-10.2493 -6.14958 -6.14958] 72037.7 439: [-6.14958 -6.14958 -6.14958] 56910.4 439: [-2.04986 -6.14958 -6.14958] 42538.4 439: [2.04986 -6.14958 -6.14958] 29552 439: [6.14958 -6.14958 -6.14958] 21798.9 439: [10.2493 -6.14958 -6.14958] 20651.8 439: [-10.2493 -2.04986 -6.14958] 65471 439: [-6.14958 -2.04986 -6.14958] 50210.2 439: [-2.04986 -2.04986 -6.14958] 35524.7 439: [2.04986 -2.04986 -6.14958] 22079 439: [6.14958 -2.04986 -6.14958] 13577.1 * 439: [10.2493 -2.04986 -6.14958] 11376 * 439: [-10.2493 2.04986 -6.14958] 65464.7 439: [-6.14958 2.04986 -6.14958] 50206.4 439: [-2.04986 2.04986 -6.14958] 35522.4 439: [2.04986 2.04986 -6.14958] 22077.6 439: [6.14958 2.04986 -6.14958] 13576.2 439: [10.2493 2.04986 -6.14958] 11375.4 * 439: [-10.2493 6.14958 -6.14958] 72046.3 439: [-6.14958 6.14958 -6.14958] 56926.2 439: [-2.04986 6.14958 -6.14958] 42555.4 439: [2.04986 6.14958 -6.14958] 29566.2 439: [6.14958 6.14958 -6.14958] 21812 439: [10.2493 6.14958 -6.14958] 20666.5 439: [-10.2493 10.2493 -6.14958] 86238.7 439: [-6.14958 10.2493 -6.14958] 71277.5 439: [-2.04986 10.2493 -6.14958] 57383.1 439: [2.04986 10.2493 -6.14958] 45141 439: [6.14958 10.2493 -6.14958] 38798.2 439: [10.2493 10.2493 -6.14958] 39782.4 439: [-10.2493 -10.2493 -2.04986] 79223.6 439: [-6.14958 -10.2493 -2.04986] 64102 439: [-2.04986 -10.2493 -2.04986] 49890.5 439: [2.04986 -10.2493 -2.04986] 37200.4 439: [6.14958 -10.2493 -2.04986] 30089.3 439: [10.2493 -10.2493 -2.04986] 29962.9 439: [-10.2493 -6.14958 -2.04986] 65471 439: [-6.14958 -6.14958 -2.04986] 50210.2 439: [-2.04986 -6.14958 -2.04986] 35524.7 439: [2.04986 -6.14958 -2.04986] 22079 439: [6.14958 -6.14958 -2.04986] 13577.1 439: [10.2493 -6.14958 -2.04986] 11376 439: [-10.2493 -2.04986 -2.04986] 59138.3 439: [-6.14958 -2.04986 -2.04986] 43721.4 439: [-2.04986 -2.04986 -2.04986] 28705.1 439: [2.04986 -2.04986 -2.04986] 14788.4 439: [6.14958 -2.04986 -2.04986] 5539.07 * 439: [10.2493 -2.04986 -2.04986] 2301.37 * 439: [-10.2493 2.04986 -2.04986] 59132.6 439: [-6.14958 2.04986 -2.04986] 43718 439: [-2.04986 2.04986 -2.04986] 28703.3 439: [2.04986 2.04986 -2.04986] 14787.4 439: [6.14958 2.04986 -2.04986] 5538.67 439: [10.2493 2.04986 -2.04986] 2301.27 * 439: [-10.2493 6.14958 -2.04986] 65478.6 439: [-6.14958 6.14958 -2.04986] 50224.3 439: [-2.04986 6.14958 -2.04986] 35539.7 439: [2.04986 6.14958 -2.04986] 22091 439: [6.14958 6.14958 -2.04986] 13587.7 439: [10.2493 6.14958 -2.04986] 11387.8 439: [-10.2493 10.2493 -2.04986] 79111.5 439: [-6.14958 10.2493 -2.04986] 64054.3 439: [-2.04986 10.2493 -2.04986] 49873.8 439: [2.04986 10.2493 -2.04986] 37188.9 439: [6.14958 10.2493 -2.04986] 30082.5 439: [10.2493 10.2493 -2.04986] 29961.4 439: [-10.2493 -10.2493 2.04986] 79216.3 439: [-6.14958 -10.2493 2.04986] 64097.4 439: [-2.04986 -10.2493 2.04986] 49887.5 439: [2.04986 -10.2493 2.04986] 37198.2 439: [6.14958 -10.2493 2.04986] 30087.7 439: [10.2493 -10.2493 2.04986] 29961.4 439: [-10.2493 -6.14958 2.04986] 65464.7 439: [-6.14958 -6.14958 2.04986] 50206.4 439: [-2.04986 -6.14958 2.04986] 35522.4 439: [2.04986 -6.14958 2.04986] 22077.6 439: [6.14958 -6.14958 2.04986] 13576.2 439: [10.2493 -6.14958 2.04986] 11375.4 439: [-10.2493 -2.04986 2.04986] 59132.6 439: [-6.14958 -2.04986 2.04986] 43718 439: [-2.04986 -2.04986 2.04986] 28703.3 439: [2.04986 -2.04986 2.04986] 14787.4 439: [6.14958 -2.04986 2.04986] 5538.67 439: [10.2493 -2.04986 2.04986] 2301.27 * 439: [-10.2493 2.04986 2.04986] 59126.8 439: [-6.14958 2.04986 2.04986] 43714.7 439: [-2.04986 2.04986 2.04986] 28701.5 439: [2.04986 2.04986 2.04986] 14786.4 439: [6.14958 2.04986 2.04986] 5538.27 439: [10.2493 2.04986 2.04986] 2301.18 * 439: [-10.2493 6.14958 2.04986] 65472.3 439: [-6.14958 6.14958 2.04986] 50220.5 439: [-2.04986 6.14958 2.04986] 35537.5 439: [2.04986 6.14958 2.04986] 22089.6 439: [6.14958 6.14958 2.04986] 13586.9 439: [10.2493 6.14958 2.04986] 11387.2 439: [-10.2493 10.2493 2.04986] 79104.4 439: [-6.14958 10.2493 2.04986] 64049.8 439: [-2.04986 10.2493 2.04986] 49870.9 439: [2.04986 10.2493 2.04986] 37186.9 439: [6.14958 10.2493 2.04986] 30080.9 439: [10.2493 10.2493 2.04986] 29960.1 439: [-10.2493 -10.2493 6.14958] 86370.3 439: [-6.14958 -10.2493 6.14958] 71349.9 439: [-2.04986 -10.2493 6.14958] 57424.9 439: [2.04986 -10.2493 6.14958] 45174.8 439: [6.14958 -10.2493 6.14958] 38826.9 439: [10.2493 -10.2493 6.14958] 39808.1 439: [-10.2493 -6.14958 6.14958] 72046.3 439: [-6.14958 -6.14958 6.14958] 56926.2 439: [-2.04986 -6.14958 6.14958] 42555.4 439: [2.04986 -6.14958 6.14958] 29566.2 439: [6.14958 -6.14958 6.14958] 21812 439: [10.2493 -6.14958 6.14958] 20666.5 439: [-10.2493 -2.04986 6.14958] 65478.6 439: [-6.14958 -2.04986 6.14958] 50224.3 439: [-2.04986 -2.04986 6.14958] 35539.7 439: [2.04986 -2.04986 6.14958] 22091 439: [6.14958 -2.04986 6.14958] 13587.7 439: [10.2493 -2.04986 6.14958] 11387.8 439: [-10.2493 2.04986 6.14958] 65472.4 439: [-6.14958 2.04986 6.14958] 50220.5 439: [-2.04986 2.04986 6.14958] 35537.5 439: [2.04986 2.04986 6.14958] 22089.6 439: [6.14958 2.04986 6.14958] 13586.9 439: [10.2493 2.04986 6.14958] 11387.2 439: [-10.2493 6.14958 6.14958] 72055.1 439: [-6.14958 6.14958 6.14958] 56942.1 439: [-2.04986 6.14958 6.14958] 42572.7 439: [2.04986 6.14958 6.14958] 29580.5 439: [6.14958 6.14958 6.14958] 21825.4 439: [10.2493 6.14958 6.14958] 20681.4 439: [-10.2493 10.2493 6.14958] 86251.4 439: [-6.14958 10.2493 6.14958] 71298.8 439: [-2.04986 10.2493 6.14958] 57406.5 439: [2.04986 10.2493 6.14958] 45161.9 439: [6.14958 10.2493 6.14958] 38818.7 439: [10.2493 10.2493 6.14958] 39805.5 439: [-10.2493 -10.2493 10.2493] 101908 439: [-6.14958 -10.2493 10.2493] 86978.3 439: [-2.04986 -10.2493 10.2493] 73484.1 439: [2.04986 -10.2493 10.2493] 61959.1 439: [6.14958 -10.2493 10.2493] 57074.3 439: [10.2493 -10.2493 10.2493] 60322.2 439: [-10.2493 -6.14958 10.2493] 86238.7 439: [-6.14958 -6.14958 10.2493] 71277.5 439: [-2.04986 -6.14958 10.2493] 57383.1 439: [2.04986 -6.14958 10.2493] 45141 439: [6.14958 -6.14958 10.2493] 38798.2 439: [10.2493 -6.14958 10.2493] 39782.4 439: [-10.2493 -2.04986 10.2493] 79111.5 439: [-6.14958 -2.04986 10.2493] 64054.3 439: [-2.04986 -2.04986 10.2493] 49873.8 439: [2.04986 -2.04986 10.2493] 37188.9 439: [6.14958 -2.04986 10.2493] 30082.5 439: [10.2493 -2.04986 10.2493] 29961.4 439: [-10.2493 2.04986 10.2493] 79104.4 439: [-6.14958 2.04986 10.2493] 64049.8 439: [-2.04986 2.04986 10.2493] 49870.9 439: [2.04986 2.04986 10.2493] 37186.9 439: [6.14958 2.04986 10.2493] 30081 439: [10.2493 2.04986 10.2493] 29960.1 439: [-10.2493 6.14958 10.2493] 86251.4 439: [-6.14958 6.14958 10.2493] 71298.8 439: [-2.04986 6.14958 10.2493] 57406.5 439: [2.04986 6.14958 10.2493] 45161.9 439: [6.14958 6.14958 10.2493] 38818.7 439: [10.2493 6.14958 10.2493] 39805.5 439: [-10.2493 10.2493 10.2493] 101782 439: [-6.14958 10.2493 10.2493] 86927.9 439: [-2.04986 10.2493 10.2493] 73469.9 439: [2.04986 10.2493 10.2493] 61951.1 439: [6.14958 10.2493 10.2493] 57072 439: [10.2493 10.2493 10.2493] 60327 439: [2] xf_out->m_type = 1, xf_in->m_type = 0 439: ** Registration worker thread finished. 439: Warping... 439: plm_warp_itk: xform_to_itk_vf 439: plm_warp_itk: convert_to_itk 439: plm_warp_itk: warping... 439: Saving image... 439: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.mha 439: Load: 0.0752769 439: Run: 0.324776 439: Save: 0.0258811 439: Total: 0.425934 439: Finished! 439: 439: STDERR: 439: Not an error 131/578 Test #439: plm-reg-autores-b ..................... Passed 0.77 sec test 559 Start 559: proton-dose-4a 559: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 559: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 559: Test timeout computed to be: 1500 543: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 543: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-1.txt;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd;--output-type;vf 543: EXPECTED_ERRNO is 546: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 546: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha 546: EXPECTED_ERRNO is 477: RETVAL: 0 477: STDOUT: Time = 0.003412 seconds 477: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png 477: 477: STDERR: 477: Not an error 132/578 Test #477: plm-thumbnail-b ....................... Passed 0.61 sec test 562 Start 562: proton-dose-4d 562: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 562: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 562: Test timeout computed to be: 1500 556: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 556: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.txt 556: EXPECTED_ERRNO is 559: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 559: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.txt 559: EXPECTED_ERRNO is 549: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 549: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--fixed;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha;--iterations;10 549: EXPECTED_ERRNO is 394: RETVAL: 0 394: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha 394: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 394: Launching registration worker thread 394: Inside registration worker thread 394: Doing registration stage 394: [1] xf_in->m_type = 0, xf_out->m_type = 0 394: RESAMPLE 1 1: (2 2 2), (2 2 2) 394: RESAMPLE 1 1: (2 2 2), (2 2 2) 394: volume_calc_grad complete. 394: bspline_xform_initialize 394: Warning: vox_per_rgn was less than 4. 394: Warning: vox_per_rgn was less than 4. 394: Warning: vox_per_rgn was less than 4. 394: rdims = (5,5,5) 394: vox_per_rgn = (4,4,4) 394: cdims = (8 8 8) 394: Algorithm flavor = g 394: Threading = 0 394: >> Checking JH allocation 394: BSPLINE PARMS 394: max_its = 5 394: max_feval = 5 394: BSPLINE XFORM HEADER 394: vox_per_rgn = 4 4 4 394: roi_offset = 0 0 0 394: roi_dim = 19 19 19 394: img_dc = 0.894427 0.447214 0 -0.447214 0.894427 0 0 0 1 394: BST METRICS 394: MET 110100 MSE 1.000000 394: Setting nmax, mmax = 1536 41 394: >>> START 394: This problem is unconstrained. 394: [ 0, 0] MSE 2326.657 NV 5814 GM -90.046 GN 30.1 [ 0.068 s ] 394: CMIN 0.00 CAVG 0.00 CMAX 0.00 394: LSD 0.00 394: [ 0, 1] MSE 2292.385 NV 5814 GM -88.991 GN 29.8 [ 0.070 s ] 394: CMIN -0.09 CAVG 0.00 CMAX 0.49 394: LSD 1.00 394: [ 0, 2] MSE 2160.182 NV 5814 GM -88.027 GN 29.4 [ 0.065 s ] 394: CMIN -0.46 CAVG 0.01 CMAX 2.46 394: LSD 5.00 394: [ 0, 3] MSE 1684.673 NV 5814 GM -70.229 GN 24.2 [ 0.082 s ] 394: CMIN -1.93 CAVG 0.04 CMAX 10.33 394: LSD 21.00 394: [ 1, 4] MSE 880.232 NV 5809 GM 22.704 GN 11.1 [ 0.124 s ] 394: CMIN -14.50 CAVG 0.20 CMAX 61.00 394: LSD 95.90 394: [ 2, 5] MSE 621.998 NV 5814 GM 5.047 GN 4.55 [ 0.115 s ] 394: CMIN -12.15 CAVG 0.16 CMAX 47.74 394: LSD 26.24 394: [2] xf_out->m_type = 9, xf_in->m_type = 0 394: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 394: bspline_xform_initialize 394: rdims = (5,5,5) 394: vox_per_rgn = (8,8,8) 394: cdims = (8 8 8) 394: ** Registration worker thread finished. 394: Writing transformation ... 394: Warping... 394: Running: plm_warp_native 394: Converting input image... 394: Converting xform... 394: bspline_xform_initialize 394: rdims = (5,5,5) 394: vox_per_rgn = (8,8,8) 394: cdims = (8 8 8) 394: Creating output vf... 394: Creating output volume... 394: Running native warper... 394: bspline_warp complete. 394: Back convert to original type... 394: > Convert vf to itk 394: > Conversion complete. 394: plm_warp_native is complete. 394: Saving image... 394: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-img.nrrd 394: Saving vf... 394: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-vf.nrrd 394: Load: 0.086966 394: Run: 0.549193 394: Save: 0.134975 394: Total: 0.771134 394: Finished! 394: 394: STDERR: 394: Not an error 562: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 562: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.txt 562: EXPECTED_ERRNO is 133/578 Test #394: plm-bsp-dcos-b ........................ Passed 1.23 sec test 565 Start 565: proton-dose-5a 565: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 565: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 565: Test timeout computed to be: 1500 465: RETVAL: 0 465: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd 465: 465: STDERR: 465: Not an error 99: RETVAL: 0 99: STDOUT: Rendering DRR 0 99: I/O time: 0.000450 sec 99: Rendering DRR 1 99: I/O time: 0.000478 sec 99: Rendering DRR 2 99: I/O time: 0.000351 sec 99: Rendering DRR 3 99: I/O time: 0.000338 sec 99: Rendering DRR 4 99: I/O time: 0.000334 sec 99: Rendering DRR 5 99: I/O time: 0.000355 sec 99: Rendering DRR 6 99: I/O time: 0.000373 sec 99: Rendering DRR 7 99: I/O time: 0.000360 sec 99: Rendering DRR 8 99: I/O time: 0.000348 sec 99: Rendering DRR 9 99: I/O time: 0.000368 sec 99: Rendering DRR 10 99: I/O time: 0.000348 sec 99: Rendering DRR 11 99: I/O time: 0.000351 sec 99: Rendering DRR 12 99: I/O time: 0.000371 sec 99: Rendering DRR 13 99: I/O time: 0.000361 sec 99: Rendering DRR 14 99: I/O time: 0.000338 sec 99: Rendering DRR 15 99: I/O time: 0.000366 sec 99: Rendering DRR 16 99: I/O time: 0.014431 sec 99: Rendering DRR 17 99: I/O time: 0.000367 sec 99: Rendering DRR 18 99: I/O time: 0.000363 sec 99: Rendering DRR 19 99: I/O time: 0.000355 sec 99: Total time: 1.5993 secs 99: 99: STDERR: 99: Not an error 134/578 Test #465: plm-scale-a ........................... Passed 0.74 sec 135/578 Test #99: drr-a ................................. Passed 1.98 sec test 568 Start 568: proton-dose-5d 568: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 568: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 568: Test timeout computed to be: 1500 test 108 Start 108: fdk-cpu-a 108: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=fdk;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 108: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 108: Test timeout computed to be: 1500 406: RETVAL: 0 406: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha 406: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 406: Launching registration worker thread 406: Inside registration worker thread 406: Doing registration stage 406: [1] xf_in->m_type = 0, xf_out->m_type = 0 406: RESAMPLE 1 1: (2 2 2), (2 2 2) 406: RESAMPLE 1 1: (2 2 2), (2 2 2) 406: volume_calc_grad complete. 406: bspline_xform_initialize 406: Warning: vox_per_rgn was less than 4. 406: Warning: vox_per_rgn was less than 4. 406: Warning: vox_per_rgn was less than 4. 406: rdims = (5,5,5) 406: vox_per_rgn = (4,4,4) 406: cdims = (8 8 8) 406: Algorithm flavor = h 406: Threading = 0 406: >> Checking JH allocation 406: BSPLINE PARMS 406: max_its = 5 406: max_feval = 5 406: BSPLINE XFORM HEADER 406: vox_per_rgn = 4 4 4 406: roi_offset = 0 0 0 406: roi_dim = 19 19 19 406: img_dc = 0.894427 0.447214 0 -0.447214 0.894427 0 0 0 1 406: BST METRICS 406: MET 110100 MSE 1.000000 406: Setting nmax, mmax = 1536 41 406: >>> START 406: This problem is unconstrained. 406: [ 0, 0] MSE 2326.657 NV 5814 GM -90.046 GN 30.1 [ 0.016 s ] 406: CMIN 0.00 CAVG 0.00 CMAX 0.00 406: LSD 0.00 406: [ 0, 1] MSE 2292.385 NV 5814 GM -88.991 GN 29.8 [ 0.014 s ] 406: CMIN -0.09 CAVG 0.00 CMAX 0.49 406: LSD 1.00 406: [ 0, 2] MSE 2160.182 NV 5814 GM -88.027 GN 29.4 [ 0.012 s ] 406: CMIN -0.46 CAVG 0.01 CMAX 2.46 406: LSD 5.00 406: [ 0, 3] MSE 1684.673 NV 5814 GM -70.229 GN 24.2 [ 0.012 s ] 406: CMIN -1.93 CAVG 0.04 CMAX 10.33 406: LSD 21.00 406: [ 1, 4] MSE 880.232 NV 5809 GM 22.704 GN 11.1 [ 0.007 s ] 406: CMIN -14.50 CAVG 0.20 CMAX 61.00 406: LSD 95.90 406: [ 2, 5] MSE 621.998 NV 5814 GM 5.047 GN 4.55 [ 0.012 s ] 406: CMIN -12.15 CAVG 0.16 CMAX 47.74 406: LSD 26.24 406: [2] xf_out->m_type = 9, xf_in->m_type = 0 406: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 406: bspline_xform_initialize 406: rdims = (5,5,5) 406: vox_per_rgn = (8,8,8) 406: cdims = (8 8 8) 406: ** Registration worker thread finished. 406: Writing transformation ... 406: Warping... 406: Running: plm_warp_native 406: Converting input image... 406: Converting xform... 406: bspline_xform_initialize 406: rdims = (5,5,5) 406: vox_per_rgn = (8,8,8) 406: cdims = (8 8 8) 406: Creating output vf... 406: Creating output volume... 406: Running native warper... 406: bspline_warp complete. 406: Back convert to original type... 406: > Convert vf to itk 406: > Conversion complete. 406: plm_warp_native is complete. 406: Saving image... 406: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-img.nrrd 406: Saving vf... 406: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-vf.nrrd 406: Load: 0.308673 406: Run: 0.0881031 406: Save: 0.192319 406: Total: 0.589095 406: Finished! 406: 406: STDERR: 406: Not an error 397: RETVAL: 0 397: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 397: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha 397: Launching registration worker thread 397: Inside registration worker thread 397: Doing registration stage 397: [1] xf_in->m_type = 0, xf_out->m_type = 0 397: RESAMPLE 1 1: (2 2 2), (2 2 2) 397: RESAMPLE 1 1: (2 2 2), (2 2 2) 397: volume_calc_grad complete. 397: bspline_xform_initialize 397: Warning: vox_per_rgn was less than 4. 397: Warning: vox_per_rgn was less than 4. 397: Warning: vox_per_rgn was less than 4. 397: rdims = (5,5,5) 397: vox_per_rgn = (4,4,4) 397: cdims = (8 8 8) 397: Algorithm flavor = c 397: Threading = 0 397: >> Checking JH allocation 397: BSPLINE PARMS 397: max_its = 5 397: max_feval = 5 397: BSPLINE XFORM HEADER 397: vox_per_rgn = 4 4 4 397: roi_offset = 0 0 0 397: roi_dim = 19 19 19 397: img_dc = 1 0 0 0 1 0 0 0 1 397: BST METRICS 397: MET 110100 MSE 1.000000 397: Setting nmax, mmax = 1536 41 397: >>> START 397: This problem is unconstrained. 397: [ 0, 0] MSE 1969.041 NV 5719 GM 151.518 GN 29 [ 0.004 s ] 397: CMIN 0.00 CAVG 0.00 CMAX 0.00 397: LSD 0.00 397: [ 0, 1] MSE 1948.894 NV 5719 GM 150.797 GN 28.8 [ 0.007 s ] 397: CMIN -0.42 CAVG -0.00 CMAX 0.04 397: LSD 1.00 397: [ 0, 2] MSE 1873.203 NV 5719 GM 152.313 GN 29.2 [ 0.011 s ] 397: CMIN -2.08 CAVG -0.02 CMAX 0.22 397: LSD 5.00 397: [ 0, 3] MSE 1636.132 NV 5719 GM 148.988 GN 28.8 [ 0.011 s ] 397: CMIN -8.76 CAVG -0.07 CMAX 0.93 397: LSD 21.00 397: [ 0, 4] MSE 1351.435 NV 5719 GM 79.113 GN 23.8 [ 0.004 s ] 397: CMIN -35.44 CAVG -0.29 CMAX 3.78 397: LSD 85.00 397: [ 1, 5] MSE 6291.440 NV 5719 GM -73.340 GN 33.2 [ 0.006 s ] 397: CMIN -126.28 CAVG -0.93 CMAX 14.98 397: LSD 199.65 397: [2] xf_out->m_type = 9, xf_in->m_type = 0 397: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 397: bspline_xform_initialize 397: rdims = (5,5,5) 397: vox_per_rgn = (8,8,8) 397: cdims = (8 8 8) 397: ** Registration worker thread finished. 397: Writing transformation ... 397: Warping... 397: Running: plm_warp_native 397: Converting input image... 397: Converting xform... 397: bspline_xform_initialize 397: rdims = (5,5,5) 397: vox_per_rgn = (8,8,8) 397: cdims = (8 8 8) 397: Creating output vf... 397: Creating output volume... 397: Running native warper... 397: bspline_warp complete. 397: Back convert to original type... 397: > Convert vf to itk 397: > Conversion complete. 397: plm_warp_native is complete. 397: Saving image... 397: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-img.nrrd 397: Saving vf... 397: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-vf.nrrd 397: Load: 0.111264 397: Run: 0.0574 397: Save: 0.47694 397: Total: 0.645604 397: Finished! 397: 397: STDERR: 397: Not an error 136/578 Test #397: plm-bsp-dcos-c ........................ Passed 1.29 sec 137/578 Test #406: plm-bsp-dcos-f ........................ Passed 1.27 sec test 111 Start 111: fdk-cpu-d 111: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=fdk;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-X;0;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 111: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 111: Test timeout computed to be: 1500 test 571 Start 571: proton-dose-6a 571: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-6a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 571: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 571: Test timeout computed to be: 1500 468: RETVAL: 0 468: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd 468: 468: STDERR: 468: Not an error 568: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 568: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.txt 568: EXPECTED_ERRNO is 565: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 565: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.txt 565: EXPECTED_ERRNO is 138/578 Test #468: plm-scale-vf-a ........................ Passed 0.80 sec test 39 Start 39: rect-10 39: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-10" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-200 50 -50 50 -50 50" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 39: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 39: Test timeout computed to be: 1500 480: RETVAL: 0 480: STDOUT: Time = 0.003685 seconds 480: Auto-adjusting intensities... 480: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png 480: 480: STDERR: 480: Not an error 139/578 Test #480: plm-thumbnail-c ....................... Passed 0.79 sec test 42 Start 42: rect-11 42: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-11" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;0;--foreground;-1000;--rect-size;-40 60 -40 60 -40 60" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 42: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 42: Test timeout computed to be: 1500 108: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 108: PARMS is fdk;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha 108: EXPECTED_ERRNO is 571: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 571: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.txt 571: EXPECTED_ERRNO is 111: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 111: PARMS is fdk;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a;-X;0;-f;none;-a;0 19;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha 111: EXPECTED_ERRNO is 495: RETVAL: 0 495: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha 495: 495: STDERR: 495: Not an error 42: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 42: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;0;--foreground;-1000;--rect-size;-40 60 -40 60 -40 60 42: EXPECTED_ERRNO is 39: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 39: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-200 50 -50 50 -50 50 39: EXPECTED_ERRNO is 140/578 Test #495: plm-threshold-c ....................... Passed 0.57 sec test 51 Start 51: rect-19 51: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-19" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-150 150 -150 150 -150 150" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 51: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 51: Test timeout computed to be: 1500 51: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 51: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-150 150 -150 150 -150 150 51: EXPECTED_ERRNO is 492: RETVAL: 0 492: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha 492: 492: STDERR: 492: Not an error 518: RETVAL: 0 518: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-affine-a.tfm) 518: Setting PIH from M_IMG 518: PIH is: 518: Origin = -243.4211 -243.4211 -243.4211 518: Size = 38 38 38 518: Spacing = 13.1579 13.1579 13.1579 518: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 518: Rt_study_warp: Warping m_img 518: plm_warp_itk: xform_to_itk_vf 518: plm_warp_itk: convert_to_itk 518: plm_warp_itk: warping... 518: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd) 518: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd 518: Rt_study_warp: warp and save ss. 518: Finished! 518: 518: STDERR: 518: Not an error 489: RETVAL: 0 489: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha 489: 489: STDERR: 489: Not an error 515: RETVAL: 0 141/578 Test #492: plm-threshold-b ....................... Passed 0.67 sec 515: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-affine-a.tfm) 515: Setting PIH from M_IMG 515: PIH is: 515: Origin = -243.4211 -243.4211 -243.4211 515: Size = 38 38 38 515: Spacing = 13.1579 13.1579 13.1579 515: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 515: Rt_study_warp: Warping m_img 515: plm_warp_itk: xform_to_itk_vf 515: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd) 515: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-img.nrrd 515: Rt_study_warp: warp and save ss. 515: Finished! 515: 515: STDERR: test 53 Start 53: rectarr-01 53: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-01" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-5 5 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 53: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 53: Test timeout computed to be: 1500 515: Not an error 142/578 Test #515: plm-warp-f ............................ Passed 0.57 sec 143/578 Test #518: plm-warp-g ............................ Passed 0.55 sec test 54 Start 54: rectarr-02 54: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-02" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-10 0 5 15 -5 5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 54: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 54: Test timeout computed to be: 1500 test 55 Start 55: rectarr-m-01 55: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-m-01" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 -20 0 -13 13" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 55: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 55: Test timeout computed to be: 1500 144/578 Test #489: plm-threshold-a ....................... Passed 0.89 sec 409: RETVAL: 0 409: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 409: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha 409: Launching registration worker thread 409: Inside registration worker thread 409: Doing registration stage 409: [1] xf_in->m_type = 0, xf_out->m_type = 0 409: Fixed image for this stage: 409: Dim = 19 19 19 409: Origin = -236.842 -236.842 -236.842 409: Spacing = 26.3158 26.3158 26.3158 409: Direction Cosines = 409: 1 0 0 409: 0 1 0 409: 0 0 1 409: Moving image for this stage: 409: Dim = 19 19 19 409: Origin = -236.842 -236.842 -236.842 409: Spacing = 26.3158 26.3158 26.3158 409: Direction Cosines = 409: 1 0 0 409: 0 1 0 409: 0 0 1 409: Initial Parameters = [0, 0, 0, 0, 0, 0] 409: Starting ITK registration 409: StartEvent: [0, 0, 0, 0, 0, 0] 409: MSE [ 0, 0,10.00] 2961.438 [4.3519801041945676e-20, -8.106231689300783e-8, 8.106231689440044e-8, -9.999999999999998, -4.351980104194578e-15, -3.829742491691229e-15] 409: :: [0, 0, 0, 0, 0, 0] 409: * 409: MSE [ 1, 1,10.00] 2086.091 [-2.2464214183992567e-18, -3.3499860475683525e-7, 3.3499860572587504e-7, -19.999999999999872, -9.942357120862573e-7, -9.942357114252402e-7] -875.35 409: :: [4.3519801041945676e-20, -8.106231689300783e-8, 8.106231689440044e-8, -9.999999999999998, -4.351980104194578e-15, -3.829742491691229e-15] 409: * 409: MSE [ 2, 2, 5.00] 1944.674 [-1.852340576642453e-17, -0.000002038776367716371, 0.0000020387763875127225, -15.000000000094076, -0.000022427961022124713, -0.000022427960958317816] -141.42 409: :: [-2.2464214183992567e-18, -3.3499860475683525e-7, 3.3499860572587504e-7, -19.999999999999872, -9.942357120862573e-7, -9.942357114252402e-7] 409: * 409: MSE [ 3, 3, 2.50] 1989.993 [-1.2093848835661368e-16, -0.000008253984618996515, 0.00000825398472647877, -17.499999999592845, -0.000055572556916401324, -0.00005557255639161924] 45.32 409: MSE [ 4, 4, 2.50] 1946.484 [-2.427124070591828e-14, -0.0010533617728272892, 0.001053361792846009, -19.999966305224685, -0.0089923700458209, -0.008992369921032257] -43.51 409: EndEvent: [-2.427124070591828e-14, -0.0010533617728272892, 0.001053361792846009, -19.999966305224685, -0.0089923700458209, -0.008992369921032257] 409: VersorTransformOptimizer: Maximum number of iterations (5) exceeded. 409: ITK registration complete 409: [2] xf_out->m_type = 2, xf_in->m_type = 0 409: Warping... 409: plm_warp_itk: xform_to_itk_vf 409: plm_warp_itk: convert_to_itk 409: plm_warp_itk: warping... 409: Saving image... 409: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-stage-1.mha 409: Doing registration stage 409: [1] xf_in->m_type = 2, xf_out->m_type = 0 409: SUBSAMPLE: (1 1 1), (1 1 1) 409: volume_calc_grad complete. 409: kerx: 0.0000000000 1.0000000000 0.0000000000 409: kery: 0.0000000000 1.0000000000 0.0000000000 409: kerz: 0.0000000000 1.0000000000 0.0000000000 409: MSE [ 0] 4770.7 (0.947) [ 0.167 secs] 409: MSE [ 1] 4770.7 (0.947) [ 0.207 secs] 409: MSE [ 2] 4770.7 (0.947) [ 0.110 secs] 409: MSE [ 3] 4770.7 (0.947) [ 0.151 secs] 409: MSE [ 4] 4770.7 (0.947) [ 0.130 secs] 409: Time for 5 iterations = 0.765004 (0.153001 sec / it) 409: [2] xf_out->m_type = 10, xf_in->m_type = 2 409: ** Registration worker thread finished. 409: Warping... 409: plm_warp_itk: xform_to_itk_vf 409: plm_warp_itk: convert_to_itk 409: plm_warp_itk: warping... 409: Saving image... 409: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-img.nrrd 409: Saving vf... 409: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-vf.nrrd 409: Load: 0.144984 409: Run: 0.976648 409: Save: 0.0230961 409: Total: 1.14473 409: Finished! 409: 409: STDERR: 409: Not an error test 56 Start 56: rectarr-m-02 56: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rectarr-m-02" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 0 20 -13 13" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 56: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 56: Test timeout computed to be: 1500 145/578 Test #409: plm-reg-multi-a ....................... Passed 1.50 sec 391: RETVAL: 0 391: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 391: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-5.mha 391: Launching registration worker thread 391: Inside registration worker thread 391: Doing registration stage 391: [1] xf_in->m_type = 0, xf_out->m_type = 0 391: RESAMPLE 1 1: (2 2 2), (2 2 2) 391: RESAMPLE 1 1: (2 2 2), (2 2 2) 391: volume_calc_grad complete. 391: bspline_xform_initialize 391: Warning: vox_per_rgn was less than 4. 391: Warning: vox_per_rgn was less than 4. 391: Warning: vox_per_rgn was less than 4. 391: rdims = (5,5,5) 391: vox_per_rgn = (4,4,4) 391: cdims = (8 8 8) 391: Algorithm flavor = g 391: Threading = 0 391: >> Checking JH allocation 391: BSPLINE PARMS 391: max_its = 5 391: max_feval = 5 391: BSPLINE XFORM HEADER 391: vox_per_rgn = 4 4 4 391: roi_offset = 0 0 0 391: roi_dim = 19 19 19 391: img_dc = 1 0 0 0 1 0 0 0 1 391: BST METRICS 391: MET 110100 MSE 1.000000 391: Setting nmax, mmax = 1536 41 391: >>> START 391: This problem is unconstrained. 391: [ 0, 0] MSE 1969.037 NV 5719 GM 151.518 GN 29 [ 0.114 s ] 391: CMIN 0.00 CAVG 0.00 CMAX 0.00 391: LSD 0.00 391: [ 0, 1] MSE 1948.891 NV 5719 GM 150.797 GN 28.8 [ 0.112 s ] 391: CMIN -0.42 CAVG -0.00 CMAX 0.04 391: LSD 1.00 391: [ 0, 2] MSE 1873.200 NV 5719 GM 152.313 GN 29.2 [ 0.087 s ] 391: CMIN -2.08 CAVG -0.02 CMAX 0.22 391: LSD 5.00 391: [ 0, 3] MSE 1636.130 NV 5719 GM 148.988 GN 28.8 [ 0.111 s ] 391: CMIN -8.76 CAVG -0.07 CMAX 0.93 391: LSD 21.00 391: [ 0, 4] MSE 1351.434 NV 5719 GM 79.112 GN 23.8 [ 0.117 s ] 391: CMIN -35.44 CAVG -0.29 CMAX 3.78 391: LSD 85.00 391: [ 1, 5] MSE 6291.438 NV 5719 GM -73.340 GN 33.2 [ 0.065 s ] 391: CMIN -126.28 CAVG -0.93 CMAX 14.98 391: LSD 199.65 391: [2] xf_out->m_type = 9, xf_in->m_type = 0 391: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 391: bspline_xform_initialize 391: rdims = (5,5,5) 391: vox_per_rgn = (8,8,8) 391: cdims = (8 8 8) 391: ** Registration worker thread finished. 391: Writing transformation ... 391: Warping... 391: Running: plm_warp_native 391: Converting input image... 391: Converting xform... 391: bspline_xform_initialize 391: rdims = (5,5,5) 391: vox_per_rgn = (8,8,8) 391: cdims = (8 8 8) 391: Creating output vf... 391: Creating output volume... 391: Running native warper... 391: bspline_warp complete. 391: Back convert to original type... 391: > Convert vf to itk 391: > Conversion complete. 391: plm_warp_native is complete. 391: Saving image... 391: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-img.nrrd 391: Saving vf... 391: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-vf.nrrd 391: Load: 0.0667109 391: Run: 0.639401 391: Save: 0.220971 391: Total: 0.927083 391: Finished! 391: 391: STDERR: 391: Not an error 146/578 Test #391: plm-bsp-dcos-a ........................ Passed 1.56 sec 486: RETVAL: 0 486: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha 486: 486: STDERR: 486: Not an error 147/578 Test #486: plm-union ............................. Passed 0.96 sec 521: RETVAL: 0 521: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-translation-1.txt) 521: Setting PIH from M_IMG 521: PIH is: 521: Origin = -25.0000 -25.0000 -25.0000 521: Size = 38 38 38 521: Spacing = 1.3158 1.3158 1.3158 521: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 521: Rt_study_warp: Warping m_img 521: plm_warp_itk: xform_to_itk_vf 521: plm_warp_itk: convert_to_itk 521: plm_warp_itk: warping... 521: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd) 521: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-img.nrrd 521: Rt_study_warp: warp and save ss. 521: Finished! 521: 521: STDERR: 521: Not an error 53: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 53: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-5 5 5 15 -5 5 53: EXPECTED_ERRNO is test 61 Start 61: roi-1 61: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=roi-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;0 300 -300 300 -300 300" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 61: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 61: Test timeout computed to be: 1500 test 65 Start 65: sphere-4 65: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=sphere-4" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;150 150 150" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 65: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 65: Test timeout computed to be: 1500 test 77 Start 77: vf-zero-stats 77: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-zero-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 77: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 77: Test timeout computed to be: 1500 54: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 54: PARMS is synth;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha;--output-type;float;--pattern;rect;--background;-1000;--foreground;0;--rect-size;-10 0 5 15 -5 5 54: EXPECTED_ERRNO is 148/578 Test #521: plm-warp-h ............................ Passed 0.62 sec test 79 Start 79: vf-trans-1-stats 79: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-trans-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 79: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 79: Test timeout computed to be: 1500 55: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 55: PARMS is synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 -20 0 -13 13 55: EXPECTED_ERRNO is 56: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 56: PARMS is synth;--fixed;rectarr-01-a.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha;--output-type;uchar;--pattern;rect;--background;0;--foreground;1;--rect-size;-13 13 0 20 -13 13 56: EXPECTED_ERRNO is 61: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 61: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;0 300 -300 300 -300 300 61: EXPECTED_ERRNO is 65: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 65: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha;--output-type;float;--pattern;sphere;--dim;38 38 38;--background;-1000;--foreground;0;--center;0 0 0;--radius;150 150 150 65: EXPECTED_ERRNO is 512: RETVAL: 0 512: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt) 512: bspline_xform_initialize 512: rdims = (3,3,3) 512: vox_per_rgn = (15,15,15) 512: cdims = (6 6 6) 512: Setting PIH from XFORM 512: PIH is: 512: Origin = -25.0000 -25.0000 -25.0000 512: Size = 38 38 38 512: Spacing = 1.3158 1.3158 1.3158 512: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 512: Rt_study_warp: Warping m_img 512: Running: plm_warp_native 512: Converting input image... 512: Converting xform... 512: bspline_xform_initialize 512: rdims = (3,3,3) 512: vox_per_rgn = (15,15,15) 512: cdims = (6 6 6) 512: Creating output vf... 512: Creating output volume... 512: Running native warper... 512: bspline_warp complete. 512: Back convert to original type... 512: > Convert vf to itk 512: > Conversion complete. 512: plm_warp_native is complete. 512: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha) 512: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha 512: Rt_study_warp: Saving vf. 512: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-vf.mha 512: Rt_study_warp: warp and save ss. 512: Finished! 512: 512: STDERR: 531: RETVAL: 0 531: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-xf-convert.txt) 531: bspline_xform_initialize 531: rdims = (2,2,2) 531: vox_per_rgn = (11,11,11) 531: cdims = (5 5 5) 531: Setting PIH from XFORM 531: PIH is: 531: Origin = -24.3421 -24.3421 -24.3421 531: Size = 19 19 19 531: Spacing = 2.6316 2.6316 2.6316 531: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 531: Rt_study_warp: Warping m_img 531: Running: plm_warp_native 531: Converting input image... 531: Converting xform... 531: bspline_xform_initialize 531: rdims = (2,2,2) 531: vox_per_rgn = (11,11,11) 531: cdims = (5 5 5) 531: Creating output vf... 531: Creating output volume... 531: Running native warper... 531: bspline_warp complete. 531: Back convert to original type... 531: > Convert vf to itk 531: > Conversion complete. 531: plm_warp_native is complete. 531: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd) 531: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd 531: Rt_study_warp: warp and save ss. 531: Finished! 531: 531: STDERR: 512: Not an error 531: Not an error 527: RETVAL: 0 527: STDOUT: bspline_xform_initialize 527: rdims = (1,1,1) 527: vox_per_rgn = (4,4,4) 527: cdims = (4 4 4) 527: about to xform_convert 527: Converting to (itk) vector field 527: did xform_convert 527: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha 527: 527: STDERR: 527: Not an error 149/578 Test #512: plm-warp-d ............................ Passed 0.73 sec 150/578 Test #531: plm-xf-convert-d-warp-1 ............... Passed 0.62 sec 77: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 77: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero.mha 77: EXPECTED_ERRNO is test 81 Start 81: vf-trans-2-stats 81: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-trans-2-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 81: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 81: Test timeout computed to be: 1500 test 83 Start 83: vf-radial-1-stats 83: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-radial-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 83: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 83: Test timeout computed to be: 1500 543: RETVAL: 0 543: STDOUT: bspline_xform_initialize 543: rdims = (1,1,1) 543: vox_per_rgn = (4,4,4) 543: cdims = (4 4 4) 543: about to xform_convert 543: Converting to (itk) vector field 543: did xform_convert 543: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd 543: 543: STDERR: 543: Not an error 79: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 79: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha 79: EXPECTED_ERRNO is 151/578 Test #527: plm-xf-convert-a ...................... Passed 0.66 sec test 85 Start 85: plm-compare-a 85: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compare-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 85: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 85: Test timeout computed to be: 1500 152/578 Test #543: plm-xf-convert-i ...................... Passed 0.58 sec test 87 Start 87: plm-compare-b 87: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compare-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 87: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 87: Test timeout computed to be: 1500 81: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 81: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha 81: EXPECTED_ERRNO is 85: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 85: PARMS is compare;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 85: EXPECTED_ERRNO is 87: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 87: PARMS is compare;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha 87: EXPECTED_ERRNO is 83: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 83: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1.mha 83: EXPECTED_ERRNO is 462: RETVAL: 0 462: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha 462: 462: STDERR: 462: Not an error 153/578 Test #462: plm-resample-c ........................ Passed 0.81 sec test 89 Start 89: plm-compare-c 89: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compare-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 89: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 89: Test timeout computed to be: 1500 524: RETVAL: 0 524: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-translation-1.txt) 524: Setting PIH from M_IMG 524: PIH is: 524: Origin = -25.0000 -25.0000 -25.0000 524: Size = 38 38 38 524: Spacing = 1.3158 1.3158 1.3158 524: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 524: Rt_study_warp: Warping m_img 524: plm_warp_itk: xform_to_itk_vf 524: plm_warp_itk: convert_to_itk 524: plm_warp_itk: warping... 524: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd) 524: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-img.nrrd 524: Rt_study_warp: warp and save ss. 524: Finished! 524: 524: STDERR: 524: Not an error 89: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 89: PARMS is compare;--mask;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2.mha 89: EXPECTED_ERRNO is 154/578 Test #524: plm-warp-i ............................ Passed 0.83 sec test 92 Start 92: plm-diff-a-stats 92: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-diff-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 92: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 92: Test timeout computed to be: 1500 39: RETVAL: 0 39: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha 39: 39: STDERR: 39: Not an error 155/578 Test #39: rect-10 ............................... Passed 0.53 sec test 95 Start 95: plm-diff-b-stats 95: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-diff-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 95: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 95: Test timeout computed to be: 1500 95: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 95: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-vf.mha 95: EXPECTED_ERRNO is 92: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 92: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-img.mha 92: EXPECTED_ERRNO is 51: RETVAL: 0 51: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha 51: 51: STDERR: 51: Not an error 156/578 Test #51: rect-19 ............................... Passed 0.60 sec test 97 Start 97: demons-a 97: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=demons-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/demons" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=-m;50;-s;3;-f;5 5 5;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 97: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 97: Test timeout computed to be: 1500 549: RETVAL: 0 549: STDOUT: Paste and smooth loop 549: Iteration 0/10 549: Convolving 549: Iteration 1/10 549: Convolving 549: Iteration 2/10 549: Convolving 549: Iteration 3/10 549: Convolving 549: Iteration 4/10 549: Convolving 549: Iteration 5/10 549: Convolving 549: Iteration 6/10 549: Convolving 549: Iteration 7/10 549: Convolving 549: Iteration 8/10 549: Convolving 549: Iteration 9/10 549: Convolving 549: Done. 549: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha 549: 549: STDERR: 549: Not an error 157/578 Test #549: xf-invert-vf-trans-1 .................. Passed 0.92 sec test 100 Start 100: drr-a-stats 100: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_0010.pfm" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 100: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 100: Test timeout computed to be: 1500 97: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/demons 97: PARMS is -m;50;-s;3;-f;5 5 5;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 97: EXPECTED_ERRNO is 54: RETVAL: 0 54: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha 54: 54: STDERR: 54: Not an error 158/578 Test #54: rectarr-02 ............................ Passed 0.57 sec test 103 Start 103: drr-b-stats 103: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;drr-b/out_0010.pfm" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 103: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 103: Test timeout computed to be: 1500 100: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 100: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a/out_0010.pfm 100: EXPECTED_ERRNO is 53: RETVAL: 0 53: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha 53: 53: STDERR: 53: Not an error 65: RETVAL: 0 65: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha 65: 65: STDERR: 65: Not an error 452: RETVAL: 0 452: STDOUT: bspline_xform_initialize 452: rdims = (2,2,2) 452: vox_per_rgn = (22,22,22) 452: cdims = (5 5 5) 452: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha 452: Finished! 452: 452: STDERR: 61: RETVAL: 0 61: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha 61: 61: STDERR: 372: RETVAL: 0 372: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 372: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha 372: Launching registration worker thread 372: Inside registration worker thread 372: Doing registration stage 372: [1] xf_in->m_type = 0, xf_out->m_type = 0 372: RESAMPLE 1 1: (1 1 1), (1 1 1) 372: RESAMPLE 1 1: (1 1 1), (1 1 1) 372: volume_calc_grad complete. 372: bspline_xform_initialize 372: Warning: vox_per_rgn was less than 4. 372: Warning: vox_per_rgn was less than 4. 372: Warning: vox_per_rgn was less than 4. 372: rdims = (10,10,10) 372: vox_per_rgn = (4,4,4) 372: cdims = (13 13 13) 372: Algorithm flavor = g 372: Threading = 0 372: Regularization: flavor = c lambda = 1.000000 372: Regularizer initialized 372: >> Checking JH allocation 372: BSPLINE PARMS 372: max_its = 5 372: max_feval = 5 372: BSPLINE XFORM HEADER 372: vox_per_rgn = 4 4 4 372: roi_offset = 0 0 0 372: roi_dim = 38 38 38 372: img_dc = 1 0 0 0 1 0 0 0 1 372: BST METRICS 372: MET 110100 MSE 1.000000 372: Setting nmax, mmax = 6591 83 372: >>> START 372: This problem is unconstrained. 372: [ 0, 0] SCORE 5540.166 NV 54872 GM 0.000 GN 28.2 [ 0.352 s ] 372: MSE 5540.166 RM 0.000 [ 0.180 | 0.172 ] 372: CMIN 0.00 CAVG 0.00 CMAX 0.00 372: LSD 0.00 372: [ 0, 1] SCORE 5484.176 NV 54872 GM 0.045 GN 27.7 [ 0.423 s ] 372: MSE 5484.124 RM 0.052 [ 0.163 | 0.260 ] 372: CMIN -0.16 CAVG -0.00 CMAX 0.22 372: LSD 1.00 372: [ 0, 2] SCORE 5267.543 NV 54872 GM 0.224 GN 25.9 [ 0.243 s ] 372: MSE 5266.236 RM 1.307 [ 0.122 | 0.121 ] 372: CMIN -0.81 CAVG 0.00 CMAX 1.12 372: LSD 5.00 372: [ 0, 3] SCORE 4507.597 NV 54872 GM 0.928 GN 18.7 [ 0.263 s ] 372: MSE 4484.536 RM 23.060 [ 0.071 | 0.192 ] 372: CMIN -3.39 CAVG 0.00 CMAX 4.70 372: LSD 21.00 372: [ 1, 4] SCORE 3149.129 NV 54872 GM 4.968 GN 2.36 [ 0.222 s ] 372: MSE 2955.678 RM 193.451 [ 0.078 | 0.144 ] 372: CMIN -10.06 CAVG -0.00 CMAX 13.65 372: LSD 42.53 372: [ 2, 5] SCORE 3079.150 NV 54872 GM -1.061 GN 2.72 [ 0.183 s ] 372: MSE 2880.344 RM 198.806 [ 0.056 | 0.127 ] 372: CMIN -10.75 CAVG -0.00 CMAX 13.43 372: LSD 6.23 372: [2] xf_out->m_type = 9, xf_in->m_type = 0 372: ** Registration worker thread finished. 372: Writing transformation ... 372: Warping... 372: Running: plm_warp_native 372: Converting input image... 372: Converting xform... 372: bspline_xform_initialize 372: rdims = (10,10,10) 372: vox_per_rgn = (4,4,4) 372: cdims = (13 13 13) 372: Creating output vf... 372: Creating output volume... 372: Running native warper... 372: bspline_warp complete. 372: Back convert to original type... 372: > Convert vf to itk 372: > Conversion complete. 372: plm_warp_native is complete. 372: Saving image... 372: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-img.mha 372: Saving vf... 372: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-vf.mha 372: Load: 0.047163 372: Run: 1.71023 372: Save: 0.081743 372: Total: 1.83914 372: Finished! 372: 372: STDERR: 159/578 Test #53: rectarr-01 ............................ Passed 0.61 sec 160/578 Test #65: sphere-4 .............................. Passed 0.52 sec test 106 Start 106: drr-c-stats 106: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=drr-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;drr-c/out_0010.pfm" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 106: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 106: Test timeout computed to be: 1500 test 115 Start 115: landmark-warp-a-stats-1 115: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-a-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 115: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 115: Test timeout computed to be: 1500 504: RETVAL: 0 504: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt) 504: bspline_xform_initialize 504: rdims = (3,3,3) 504: vox_per_rgn = (15,15,15) 504: cdims = (6 6 6) 504: Setting PIH from XFORM 504: PIH is: 504: Origin = -25.0000 -25.0000 -25.0000 504: Size = 38 38 38 504: Spacing = 1.3158 1.3158 1.3158 504: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 504: Rt_study_warp: Warping m_img 504: Running: plm_warp_native 504: Converting input image... 504: Converting xform... 504: bspline_xform_initialize 504: rdims = (3,3,3) 504: vox_per_rgn = (15,15,15) 504: cdims = (6 6 6) 504: Creating output vf... 504: Creating output volume... 504: Running native warper... 504: bspline_warp complete. 504: Back convert to original type... 504: > Convert vf to itk 504: > Conversion complete. 504: plm_warp_native is complete. 504: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha) 504: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha 504: Rt_study_warp: Saving vf. 504: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha 504: Rt_study_warp: warp and save ss. 504: Finished! 504: 504: STDERR: 372: Not an error 534: RETVAL: 0 534: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-xf.tfm) 534: BSplineDeformableTransform (0x55f7de8ddf40) 534: RTTI typeinfo: itk::BSplineDeformableTransform 534: Reference Count: 3 534: Modified Time: 1477 534: Debug: Off 534: Object Name: 534: Observers: 534: none 534: CoefficientImage: [ 0x55f7de8d8660, 0x55f7de8da7f0, 0x55f7de8daab0 ] 534: ValidRegion: ImageRegion (0x55f7de8de088) 534: Dimension: 3 534: Index: [1, 1, 1] 534: Size: [3, 3, 3] 534: 534: BulkTransform: 0x55f7de8d9350 534: WeightsFunction: 0x55f7de8dd670 534: BulkTransformType: IdentityTransform 534: GridOrigin: [-53.2895, -53.2895, -53.2895] 534: GridSpacing: [28.9474, 28.9474, 28.9474] 534: GridDirection: 1 0 0 534: 0 1 0 534: 0 0 1 534: 534: GridRegion: ImageRegion (0x55f7de8d8868) 534: Dimension: 3 534: Index: [0, 0, 0] 534: Size: [5, 5, 5] 534: 534: Setting PIH from M_IMG 534: PIH is: 534: Origin = -25.0000 -25.0000 -25.0000 534: Size = 38 38 38 534: Spacing = 1.3158 1.3158 1.3158 534: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 534: Rt_study_warp: Warping m_img 534: plm_warp_itk: xform_to_itk_vf 534: plm_warp_itk: convert_to_itk 534: plm_warp_itk: warping... 534: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd) 534: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd 534: Rt_study_warp: warp and save ss. 534: Finished! 534: 534: STDERR: 42: RETVAL: 0 42: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha 42: 42: STDERR: 161/578 Test #372: plm-bsp-regularize-analytic ........... Passed 2.23 sec test 117 Start 117: landmark-warp-a-stats-2 117: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-a-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 117: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 117: Test timeout computed to be: 1500 42: Not an error 61: Not an error 504: Not an error 534: Not an error 106: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 106: PARMS is stats;drr-c/out_0010.pfm 106: EXPECTED_ERRNO is 452: Not an error 162/578 Test #42: rect-11 ............................... Passed 0.77 sec 163/578 Test #61: roi-1 ................................. Passed 0.57 sec test 120 Start 120: landmark-warp-b-stats-1 120: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-b-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 120: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 120: Test timeout computed to be: 1500 test 122 Start 122: landmark-warp-b-stats-2 122: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-b-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 122: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 122: Test timeout computed to be: 1500 103: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 103: PARMS is stats;drr-b/out_0010.pfm 103: EXPECTED_ERRNO is 540: RETVAL: 0 540: STDOUT: about to xform_convert 540: Converting to (itk) vector field 540: did xform_convert 540: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd 540: 540: STDERR: 540: Not an error 164/578 Test #452: plm-compose-c ......................... Passed 1.64 sec 165/578 Test #504: plm-warp-b ............................ Passed 1.27 sec 166/578 Test #534: plm-xf-convert-d-warp-2 ............... Passed 1.12 sec 167/578 Test #540: plm-xf-convert-h ...................... Passed 1.11 sec test 125 Start 125: landmark-warp-c-stats-1 125: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-c-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 125: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 125: Test timeout computed to be: 1500 test 127 Start 127: landmark-warp-c-stats-2 127: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-c-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 127: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 127: Test timeout computed to be: 1500 test 131 Start 131: plm-add-a-stats 131: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 131: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 131: Test timeout computed to be: 1500 test 134 Start 134: plm-add-b-stats 134: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 134: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 134: Test timeout computed to be: 1500 115: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 115: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-img.mha 115: EXPECTED_ERRNO is 546: RETVAL: 0 546: STDOUT: Paste and smooth loop 546: Iteration 0/20 546: Convolving 546: Iteration 1/20 546: Convolving 546: Iteration 2/20 546: Convolving 546: Iteration 3/20 546: Convolving 546: Iteration 4/20 546: Convolving 546: Iteration 5/20 546: Convolving 546: Iteration 6/20 546: Convolving 546: Iteration 7/20 546: Convolving 546: Iteration 8/20 546: Convolving 546: Iteration 9/20 546: Convolving 546: Iteration 10/20 546: Convolving 546: Iteration 11/20 546: Convolving 546: Iteration 12/20 546: Convolving 546: Iteration 13/20 546: Convolving 546: Iteration 14/20 546: Convolving 546: Iteration 15/20 546: Convolving 546: Iteration 16/20 546: Convolving 546: Iteration 17/20 546: Convolving 546: Iteration 18/20 546: Convolving 546: Iteration 19/20 546: Convolving 546: Done. 546: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha 546: 546: STDERR: 546: Not an error 168/578 Test #546: xf-invert-vf-zero-1 ................... Passed 1.09 sec 117: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 117: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-vf.mha 117: EXPECTED_ERRNO is 122: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 122: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-vf.mha 122: EXPECTED_ERRNO is test 137 Start 137: plm-add-vf-a-stats 137: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 137: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 137: Test timeout computed to be: 1500 83: RETVAL: 0 83: STDOUT: Min: -9.993 -9.993 -9.993 83: Mean: 0.000 0.000 0.000 83: Max: 9.993 9.993 9.993 83: Mean abs: 5.157 5.157 5.157 83: Ave len: 9.998 83: Jacobian: MINJAC 1.05079 MAXJAC 2.37037 83: Energy: MINDIL 0.0502 MAXDIL 1 83: MAXSTRAIN 1.5 TOTSTRAIN 5055.08 83: Second derivatives: MINSECDER 0 MAXSECDER 0.114 83: AVESECDER 0.000227 INTSECDER 2.84e+04 83: Max second derivative at: (20 19 17) 83: 83: STDERR: 83: Not an error 120: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 120: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-img.mha 120: EXPECTED_ERRNO is 169/578 Test #83: vf-radial-1-stats ..................... Passed 0.59 sec test 140 Start 140: plm-add-vf-b-stats 140: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-add-vf-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 140: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 140: Test timeout computed to be: 1500 127: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 127: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha 127: EXPECTED_ERRNO is 125: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 125: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-img.mha 125: EXPECTED_ERRNO is 77: RETVAL: 0 77: STDOUT: Min: 0.000 0.000 0.000 77: Mean: 0.000 0.000 0.000 77: Max: 0.000 0.000 0.000 77: Mean abs: 0.000 0.000 0.000 77: Ave len: 0.000 77: Jacobian: MINJAC 1 MAXJAC 1 77: Energy: MINDIL 0 MAXDIL 0 77: MAXSTRAIN 0 TOTSTRAIN 0 77: Second derivatives: MINSECDER 0 MAXSECDER 0 77: AVESECDER 0 INTSECDER 0 77: Max second derivative at: (1 1 1) 77: 77: STDERR: 77: Not an error 131: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 131: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a.nrrd 131: EXPECTED_ERRNO is 134: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 134: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b.nrrd 134: EXPECTED_ERRNO is 56: RETVAL: 0 56: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha 56: 56: STDERR: 56: Not an error 92: RETVAL: 0 92: STDOUT: MIN -558.201904 AVE 7.769665 MAX 558.680786 NONZERO 54872 NUMVOX 54872 92: 92: STDERR: 92: Not an error 170/578 Test #77: vf-zero-stats ......................... Passed 0.67 sec test 143 Start 143: plm-adjust-a-stats 143: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 143: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 143: Test timeout computed to be: 1500 171/578 Test #56: rectarr-m-02 .......................... Passed 0.73 sec 172/578 Test #92: plm-diff-a-stats ...................... Passed 0.45 sec test 146 Start 146: plm-adjust-b-stats 146: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 146: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 146: Test timeout computed to be: 1500 test 149 Start 149: plm-adjust-c-stats 149: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 149: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 149: Test timeout computed to be: 1500 137: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 137: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a.nrrd 137: EXPECTED_ERRNO is 140: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 140: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b.nrrd 140: EXPECTED_ERRNO is 100: RETVAL: 0 100: STDOUT: Image center: 63.5 63.5 100: Projection matrix: -1.86502e-08 -0.213333 0 0 0 0 -0.213333 0 0.000666667 -5.82819e-11 0 0.666667 100: MIN 0.000000 AVE 0.000135 MAX 0.050109 NUM 16384 100: 100: STDERR: 100: Not an error 79: RETVAL: 0 79: STDOUT: Min: 10.000 0.000 0.000 79: Mean: 10.000 0.000 0.000 79: Max: 10.000 0.000 0.000 79: Mean abs: 10.000 0.000 0.000 79: Ave len: 10.000 79: Jacobian: MINJAC 1 MAXJAC 1 79: Energy: MINDIL 0 MAXDIL 0 79: MAXSTRAIN 0 TOTSTRAIN 0 79: Second derivatives: MINSECDER 0 MAXSECDER 0 79: AVESECDER 0 INTSECDER 0 79: Max second derivative at: (1 1 1) 79: 79: STDERR: 55: RETVAL: 0 55: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha 55: 55: STDERR: 55: Not an error 79: Not an error 173/578 Test #100: drr-a-stats ........................... Passed 0.26 sec test 152 Start 152: plm-adjust-d-stats 152: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 152: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 152: Test timeout computed to be: 1500 174/578 Test #79: vf-trans-1-stats ...................... Passed 0.70 sec test 155 Start 155: plm-adjust-e-stats 155: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 155: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 155: Test timeout computed to be: 1500 143: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 143: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a.nrrd 143: EXPECTED_ERRNO is 81: RETVAL: 0 81: STDOUT: Min: 0.000 10.000 0.000 81: Mean: 0.000 10.000 0.000 81: Max: 0.000 10.000 0.000 81: Mean abs: 0.000 10.000 0.000 81: Ave len: 10.000 81: Jacobian: MINJAC 1 MAXJAC 1 81: Energy: MINDIL 0 MAXDIL 0 81: MAXSTRAIN 0 TOTSTRAIN 0 81: Second derivatives: MINSECDER 0 MAXSECDER 0 81: AVESECDER 0 INTSECDER 0 81: Max second derivative at: (1 1 1) 81: 81: STDERR: 81: Not an error 146: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 146: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b.nrrd 146: EXPECTED_ERRNO is 89: RETVAL: 0 89: STDOUT: Mask enabled. 512 / 54872 voxels inside mask 89: Min: 10.000 -10.000 0.000 89: Mean: 10.000 -10.000 0.000 89: Max: 10.000 -10.000 0.000 89: Mean abs: 10.000 10.000 0.000 89: Ave len: 14.142 89: Min (mask): 10.000 -10.000 0.000 89: Mean (mask): 10.000 -10.000 0.000 89: Max (mask): 10.000 -10.000 0.000 89: Mean abs (mask): 10.000 10.000 0.000 89: Ave len (mask): 14.142 89: 89: STDERR: 89: Not an error 175/578 Test #81: vf-trans-2-stats ...................... Passed 0.68 sec test 158 Start 158: plm-adjust-f-stats 158: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-f-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 158: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 158: Test timeout computed to be: 1500 152: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 152: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d.nrrd 152: EXPECTED_ERRNO is 176/578 Test #55: rectarr-m-01 .......................... Passed 0.81 sec 177/578 Test #89: plm-compare-c ......................... Passed 0.55 sec test 161 Start 161: plm-adjust-g-stats 161: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-g-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 161: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 161: Test timeout computed to be: 1500 test 164 Start 164: plm-adjust-h-stats 164: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-h-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 164: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 164: Test timeout computed to be: 1500 85: RETVAL: 0 85: STDOUT: MIN -558.201904 AVE 7.769665 MAX 558.680786 85: MAE 85.100204 MSE 18945.890625 85: DIF 54872 NUM 54872 85: 85: STDERR: 85: Not an error 149: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 149: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c.nrrd 149: EXPECTED_ERRNO is 158: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 158: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f.nrrd 158: EXPECTED_ERRNO is 298: RETVAL: 0 298: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 298: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 298: Launching registration worker thread 298: Inside registration worker thread 298: Doing registration stage 298: [1] xf_in->m_type = 0, xf_out->m_type = 0 298: Fixed image for this stage: 298: Dim = 38 38 38 298: Origin = -25 -25 -25 298: Spacing = 1.31579 1.31579 1.31579 298: Direction Cosines = 298: 1 0 0 298: 0 1 0 298: 0 0 1 298: Moving image for this stage: 298: Dim = 38 38 38 298: Origin = -25 -25 -25 298: Spacing = 1.31579 1.31579 1.31579 298: Direction Cosines = 298: 1 0 0 298: 0 1 0 298: 0 0 1 298: Starting ITK registration 298: StartEvent: 298: MSE [ 0, 0] 18945.891 [ 0.173 secs] 298: MSE [ 0, 1] 18140.496 [ 0.163 secs] 298: MSE [ 0, 2] 14979.440 [ 0.170 secs] 298: MSE [ 0, 3] 5390.861 [ 0.139 secs] 298: MSE [ 0, 4,319.84] 5390.861 * 298: MSE [ 1, 5] 4259.522 [ 0.142 secs] 298: MSE [ 1, 6,313.58] 4259.522 -1131.34 * 298: MSE [ 2, 7] 465.644 [ 0.135 secs] 298: MSE [ 2, 8,36.78] 465.644 -3793.88 * 298: MSE [ 3, 9] 382.530 [ 0.162 secs] 298: MSE [ 3, 10,21.77] 382.530 -83.11 * 298: MSE [ 4, 11] 289.494 [ 0.140 secs] 298: MSE [ 4, 12,13.35] 289.494 -93.04 * 298: MSE [ 5, 13] 226.103 [ 0.129 secs] 298: MSE [ 5, 14,21.50] 226.103 -63.39 * 298: EndEvent: 298: Too many iterations. Iterations = 6 298: LBFGSBOptimizer: 298: ITK registration complete 298: [2] xf_out->m_type = 6, xf_in->m_type = 0 298: ** Registration worker thread finished. 298: Writing transformation ... 298: Warping... 298: plm_warp_itk: xform_to_itk_vf 298: plm_warp_itk: convert_to_itk 298: plm_warp_itk: warping... 298: Saving image... 298: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-img.mha 298: Saving vf... 298: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-vf.mha 298: Load: 0.044378 298: Run: 1.98256 298: Save: 0.281144 298: Total: 2.30808 298: Finished! 298: 298: STDERR: 298: Not an error 178/578 Test #85: plm-compare-a ......................... Passed 0.68 sec test 167 Start 167: plm-adjust-i-stats 167: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-i-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 167: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 167: Test timeout computed to be: 1500 106: RETVAL: 0 106: STDOUT: Image center: 63.5 63.5 106: Projection matrix: -1.86502e-08 -0.213333 0 0 0 0 -0.213333 0 0.000666667 -5.82819e-11 0 0.666667 106: MIN 0.000000 AVE 0.000125 MAX 0.050494 NUM 16384 106: 106: STDERR: 106: Not an error 179/578 Test #298: plm-reg-itk-bspline ................... Passed 2.61 sec 180/578 Test #106: drr-c-stats ........................... Passed 0.27 sec test 170 Start 170: plm-adjust-j-stats 170: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-adjust-j-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 170: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 170: Test timeout computed to be: 1500 test 173 Start 173: plm-boundary-a-stats 173: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 173: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 173: Test timeout computed to be: 1500 155: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 155: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e.nrrd 155: EXPECTED_ERRNO is 167: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 167: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i.nrrd 167: EXPECTED_ERRNO is 161: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 161: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g.nrrd 161: EXPECTED_ERRNO is 164: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 164: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h.nrrd 164: EXPECTED_ERRNO is 170: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 170: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j.nrrd 170: EXPECTED_ERRNO is 173: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 173: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a.nrrd 173: EXPECTED_ERRNO is 95: RETVAL: 0 95: STDOUT: Min: 10.000 -10.000 0.000 95: Mean: 10.000 -10.000 0.000 95: Max: 10.000 -10.000 0.000 95: Mean abs: 10.000 10.000 0.000 95: Ave len: 14.142 95: Jacobian: MINJAC 1 MAXJAC 1 95: Energy: MINDIL 0 MAXDIL 0 95: MAXSTRAIN 0 TOTSTRAIN 0 95: Second derivatives: MINSECDER 0 MAXSECDER 0 95: AVESECDER 0 INTSECDER 0 95: Max second derivative at: (1 1 1) 95: 95: STDERR: 95: Not an error 87: RETVAL: 0 87: STDOUT: Min: 10.000 -10.000 0.000 87: Mean: 10.000 -10.000 0.000 87: Max: 10.000 -10.000 0.000 87: Mean abs: 10.000 10.000 0.000 87: Ave len: 14.142 87: 87: STDERR: 87: Not an error 181/578 Test #95: plm-diff-b-stats ...................... Passed 0.58 sec test 176 Start 176: plm-boundary-b-stats 176: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 176: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 176: Test timeout computed to be: 1500 182/578 Test #87: plm-compare-b ......................... Passed 0.77 sec test 179 Start 179: plm-boundary-c-stats 179: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 179: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 179: Test timeout computed to be: 1500 117: RETVAL: 0 117: STDOUT: Min: -62.465 -4.112 -0.000 117: Mean: -22.960 0.011 0.000 117: Max: 16.278 4.199 0.000 117: Mean abs: 25.589 1.505 0.000 117: Ave len: 25.766 117: Jacobian: MINJAC 1.12686 MAXJAC 1.15895 117: Energy: MINDIL 0.128 MAXDIL 0.157995 117: MAXSTRAIN 0.171 TOTSTRAIN 7133.92 117: Second derivatives: MINSECDER 2.92e-10 MAXSECDER 0.000557 117: AVESECDER 7.93e-07 INTSECDER 99.2 117: Max second derivative at: (24 15 22) 117: 117: STDERR: 176: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 176: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b.nrrd 176: EXPECTED_ERRNO is 117: Not an error 183/578 Test #117: landmark-warp-a-stats-2 ............... Passed 0.37 sec test 182 Start 182: plm-boundary-d-stats 182: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 182: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 182: Test timeout computed to be: 1500 179: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 179: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c.nrrd 179: EXPECTED_ERRNO is 509: RETVAL: 0 509: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt) 509: bspline_xform_initialize 509: rdims = (3,3,3) 509: vox_per_rgn = (15,15,15) 509: cdims = (6 6 6) 509: Setting PIH from XFORM 509: PIH is: 509: Origin = -25.0000 -25.0000 -25.0000 509: Size = 38 38 38 509: Spacing = 1.3158 1.3158 1.3158 509: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 509: Rt_study_warp: Warping m_img 509: plm_warp_itk: xform_to_itk_vf 509: plm_warp_itk: convert_to_itk 509: plm_warp_itk: warping... 509: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha) 509: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha 509: Rt_study_warp: Saving vf. 509: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-vf.mha 509: Rt_study_warp: warp and save ss. 509: Finished! 509: 509: STDERR: 509: Not an error 184/578 Test #509: plm-warp-c ............................ Passed 1.62 sec test 185 Start 185: plm-boundary-e-stats 185: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-boundary-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 185: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 185: Test timeout computed to be: 1500 501: RETVAL: 0 501: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/xf-bspline-2.txt) 501: bspline_xform_initialize 501: rdims = (3,3,3) 501: vox_per_rgn = (15,15,15) 501: cdims = (6 6 6) 501: Setting PIH from XFORM 501: PIH is: 501: Origin = -25.0000 -25.0000 -25.0000 501: Size = 38 38 38 501: Spacing = 1.3158 1.3158 1.3158 501: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 501: Rt_study_warp: Warping m_img 501: plm_warp_itk: xform_to_itk_vf 501: plm_warp_itk: convert_to_itk 501: plm_warp_itk: warping... 501: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha) 501: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a.mha 501: Rt_study_warp: Saving vf. 501: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha 501: Rt_study_warp: warp and save ss. 501: Finished! 501: 501: STDERR: 501: Not an error 182: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 182: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d.nrrd 182: EXPECTED_ERRNO is 103: RETVAL: 0 103: STDOUT: Image center: 63.5 63.5 103: Projection matrix: -1.86502e-08 -0.213333 0 0 0 0 -0.213333 0 0.000666667 -5.82819e-11 0 0.666667 103: MIN 0.000000 AVE 0.000138 MAX 0.049634 NUM 16384 103: 103: STDERR: 185/578 Test #501: plm-warp-a ............................ Passed 1.71 sec test 188 Start 188: plm-convert-dicom-a-stats 188: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 188: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 188: Test timeout computed to be: 1500 103: Not an error 185: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 185: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e.nrrd 185: EXPECTED_ERRNO is 186/578 Test #103: drr-b-stats ........................... Passed 0.50 sec test 191 Start 191: plm-convert-dicom-b-stats 191: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/dicom_info" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom/image0000.dcm" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 191: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 191: Test timeout computed to be: 1500 115: RETVAL: 0 115: STDOUT: MIN -1000.000000 AVE -991.799744 MAX 0.000000 NONZERO 54494 NUMVOX 54872 115: 115: STDERR: 115: Not an error 187/578 Test #115: landmark-warp-a-stats-1 ............... Passed 0.49 sec test 200 Start 200: plm-convert-dicom-donut-a-stats 200: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 200: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 200: Test timeout computed to be: 1500 137: RETVAL: 0 137: STDOUT: Min: 20.000 0.000 0.000 137: Mean: 20.000 0.000 0.000 137: Max: 20.000 0.000 0.000 137: Mean abs: 20.000 0.000 0.000 137: Ave len: 20.000 137: Jacobian: MINJAC 1 MAXJAC 1 137: Energy: MINDIL 0 MAXDIL 0 137: MAXSTRAIN 0 TOTSTRAIN 0 137: Second derivatives: MINSECDER 0 MAXSECDER 0 137: AVESECDER 0 INTSECDER 0 137: Max second derivative at: (1 1 1) 137: 137: STDERR: 137: Not an error 188: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 188: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-ss.mha 188: EXPECTED_ERRNO is 191: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/dicom_info 191: PARMS is --input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom/image0000.dcm 191: EXPECTED_ERRNO is 430: RETVAL: 0 430: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 430: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 430: Launching registration worker thread 430: Inside registration worker thread 430: Doing registration stage 430: [1] xf_in->m_type = 0, xf_out->m_type = 0 430: RESAMPLE 1 1: (1 1 1), (1 1 1) 430: RESAMPLE 1 1: (1 1 1), (1 1 1) 430: volume_calc_grad complete. 430: Computing grid search extent. 430: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) 430: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) 430: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) 430: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) 430: [0 0 0] 18945.9 * 430: Global grid search 430: [-10 -10 -10] 109949 430: [-6 -10 -10] 96800 430: [-2 -10 -10] 79011.9 430: [2 -10 -10] 66244.1 430: [6 -10 -10] 61932.6 430: [10 -10 -10] 63642.7 430: [-10 -6 -10] 95633.9 430: [-6 -6 -10] 81703.4 430: [-2 -6 -10] 63642.4 430: [2 -6 -10] 49838.6 430: [6 -6 -10] 43366.8 430: [10 -6 -10] 43154 430: [-10 -2 -10] 84842.6 430: [-6 -2 -10] 71049.9 430: [-2 -2 -10] 53542.3 430: [2 -2 -10] 39751 430: [6 -2 -10] 32450.7 430: [10 -2 -10] 31286.8 430: [-10 2 -10] 84829.9 430: [-6 2 -10] 71041.2 430: [-2 2 -10] 53536.6 430: [2 2 -10] 39746.7 430: [6 2 -10] 32446.9 430: [10 2 -10] 31283.5 430: [-10 6 -10] 95561.4 430: [-6 6 -10] 81658.4 430: [-2 6 -10] 63613.3 430: [2 6 -10] 49813.8 430: [6 6 -10] 43342.5 430: [10 6 -10] 43131.5 430: [-10 10 -10] 109668 430: [-6 10 -10] 96633.8 430: [-2 10 -10] 78907 430: [2 10 -10] 66152.1 430: [6 10 -10] 61839.3 430: [10 10 -10] 63556.7 430: [-10 -10 -6] 95633.9 430: [-6 -10 -6] 81703.4 430: [-2 -10 -6] 63642.4 430: [2 -10 -6] 49838.6 430: [6 -10 -6] 43366.8 430: [10 -10 -6] 43154 430: [-10 -6 -6] 82028.8 430: [-6 -6 -6] 67247.9 430: [-2 -6 -6] 48818.3 430: [2 -6 -6] 33916.9 430: [6 -6 -6] 25278 430: [10 -6 -6] 23165.8 430: [-10 -2 -6] 72112.1 430: [-6 -2 -6] 57467.9 430: [-2 -2 -6] 39558.4 430: [2 -2 -6] 24681.2 430: [6 -2 -6] 15293.3 * 430: [10 -2 -6] 12314.7 * 430: [-10 2 -6] 72100.9 430: [-6 2 -6] 57460.6 430: [-2 2 -6] 39554 430: [2 2 -6] 24678.2 430: [6 2 -6] 15291.1 430: [10 2 -6] 12313 * 430: [-10 6 -6] 81963.5 430: [-6 6 -6] 67208.4 430: [-2 6 -6] 48793.6 430: [2 6 -6] 33896.7 430: [6 6 -6] 25258.7 430: [10 6 -6] 23148.6 430: [-10 10 -6] 95379.4 430: [-6 10 -6] 81554.8 430: [-2 10 -6] 63550.9 430: [2 10 -6] 49759.6 430: [6 10 -6] 43287.7 430: [10 10 -6] 43082.4 430: [-10 -10 -2] 84842.6 430: [-6 -10 -2] 71049.9 430: [-2 -10 -2] 53542.3 430: [2 -10 -2] 39751 430: [6 -10 -2] 32450.7 430: [10 -10 -2] 31286.8 430: [-10 -6 -2] 72112.1 430: [-6 -6 -2] 57467.9 430: [-2 -6 -2] 39558.4 430: [2 -6 -2] 24681.2 430: [6 -6 -2] 15293.3 430: [10 -6 -2] 12314.7 430: [-10 -2 -2] 63010.9 430: [-6 -2 -2] 48498.1 430: [-2 -2 -2] 31072.4 430: [2 -2 -2] 16224.1 430: [6 -2 -2] 6155.79 * 430: [10 -2 -2] 2386.22 * 430: [-10 2 -2] 63000.9 430: [-6 2 -2] 48491.8 430: [-2 2 -2] 31068.8 430: [2 2 -2] 16221.9 430: [6 2 -2] 6154.44 430: [10 2 -2] 2385.44 * 430: [-10 6 -2] 72052.8 430: [-6 6 -2] 57432.4 430: [-2 6 -2] 39536.8 430: [2 6 -2] 24663.8 430: [6 6 -2] 15277.1 430: [10 6 -2] 12300.5 430: [-10 10 -2] 84610.1 430: [-6 10 -2] 70915.1 430: [-2 10 -2] 53460.4 430: [2 10 -2] 39681 430: [6 10 -2] 32381 430: [10 10 -2] 31224.4 430: [-10 -10 2] 84829.9 430: [-6 -10 2] 71041.2 430: [-2 -10 2] 53536.6 430: [2 -10 2] 39746.7 430: [6 -10 2] 32446.9 430: [10 -10 2] 31283.5 430: [-10 -6 2] 72100.9 430: [-6 -6 2] 57460.6 430: [-2 -6 2] 39554 430: [2 -6 2] 24678.2 430: [6 -6 2] 15291.1 430: [10 -6 2] 12313 430: [-10 -2 2] 63000.9 430: [-6 -2 2] 48491.8 430: [-2 -2 2] 31068.8 430: [2 -2 2] 16221.9 430: [6 -2 2] 6154.44 430: [10 -2 2] 2385.44 430: [-10 2 2] 62990.9 430: [-6 2 2] 48485.5 430: [-2 2 2] 31065.2 430: [2 2 2] 16219.7 430: [6 2 2] 6153.1 430: [10 2 2] 2384.66 * 430: [-10 6 2] 72041.7 430: [-6 6 2] 57425.2 430: [-2 6 2] 39532.4 430: [2 6 2] 24660.8 430: [6 6 2] 15274.9 430: [10 6 2] 12298.9 430: [-10 10 2] 84597.7 430: [-6 10 2] 70906.7 430: [-2 10 2] 53454.9 430: [2 10 2] 39676.9 430: [6 10 2] 32377.5 430: [10 10 2] 31221.4 430: [-10 -10 6] 95561.4 430: [-6 -10 6] 81658.4 430: [-2 -10 6] 63613.3 430: [2 -10 6] 49813.8 430: [6 -10 6] 43342.5 430: [10 -10 6] 43131.5 430: [-10 -6 6] 81963.5 430: [-6 -6 6] 67208.4 430: [-2 -6 6] 48793.6 430: [2 -6 6] 33896.7 430: [6 -6 6] 25258.7 430: [10 -6 6] 23148.6 430: [-10 -2 6] 72052.8 430: [-6 -2 6] 57432.4 430: [-2 -2 6] 39536.8 430: [2 -2 6] 24663.8 430: [6 -2 6] 15277.1 430: [10 -2 6] 12300.5 430: [-10 2 6] 72041.7 430: [-6 2 6] 57425.2 430: [-2 2 6] 39532.4 430: [2 2 6] 24660.8 430: [6 2 6] 15274.9 430: [10 2 6] 12298.9 430: [-10 6 6] 81898.9 430: [-6 6 6] 67169.4 430: [-2 6 6] 48769.5 430: [2 6 6] 33876.9 430: [6 6 6] 25240 430: [10 6 6] 23132 430: [-10 10 6] 95309.5 430: [-6 10 6] 81512.3 430: [-2 10 6] 63524.1 430: [2 10 6] 49737.2 430: [6 10 6] 43266 430: [10 10 6] 43062.8 430: [-10 -10 10] 109668 430: [-6 -10 10] 96633.8 430: [-2 -10 10] 78907 430: [2 -10 10] 66152.1 430: [6 -10 10] 61839.3 430: [10 -10 10] 63556.7 430: [-10 -6 10] 95379.4 430: [-6 -6 10] 81554.8 430: [-2 -6 10] 63550.9 430: [2 -6 10] 49759.6 430: [6 -6 10] 43287.7 430: [10 -6 10] 43082.4 430: [-10 -2 10] 84610.1 430: [-6 -2 10] 70915.1 430: [-2 -2 10] 53460.4 430: [2 -2 10] 39681 430: [6 -2 10] 32381 430: [10 -2 10] 31224.4 430: [-10 2 10] 84597.7 430: [-6 2 10] 70906.7 430: [-2 2 10] 53454.9 430: [2 2 10] 39676.9 430: [6 2 10] 32377.5 430: [10 2 10] 31221.4 430: [-10 6 10] 95309.5 430: [-6 6 10] 81512.3 430: [-2 6 10] 63524.1 430: [2 6 10] 49737.2 430: [6 6 10] 43266 430: [10 6 10] 43062.8 430: [-10 10 10] 109399 430: [-6 10 10] 96478.4 430: [-2 10 10] 78812.5 430: [2 10 10] 66070.4 430: [6 10 10] 61757.4 430: [10 10 10] 63483 430: [2] xf_out->m_type = 1, xf_in->m_type = 0 430: Doing registration stage 430: [1] xf_in->m_type = 1, xf_out->m_type = 0 430: RESAMPLE 1 1: (1 1 1), (1 1 1) 430: RESAMPLE 1 1: (1 1 1), (1 1 1) 430: volume_calc_grad complete. 430: Computing grid search extent. 430: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) 430: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) 430: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) 430: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) 430: [10 2 2] 2384.66 * 430: Local grid search 430: [6.4 -1.6 -1.6] 4439.65 430: [8.8 -1.6 -1.6] 1771.35 * 430: [11.2 -1.6 -1.6] 1856.67 430: [13.6 -1.6 -1.6] 4787.36 430: [6.4 0.8 -1.6] 3954.1 430: [8.8 0.8 -1.6] 1244.73 * 430: [11.2 0.8 -1.6] 1300.61 430: [13.6 0.8 -1.6] 4226.79 430: [6.4 3.2 -1.6] 6520.93 430: [8.8 3.2 -1.6] 3949.58 430: [11.2 3.2 -1.6] 4155.43 430: [13.6 3.2 -1.6] 7178.92 430: [6.4 5.6 -1.6] 12337.8 430: [8.8 5.6 -1.6] 10089.9 430: [11.2 5.6 -1.6] 10636.9 430: [13.6 5.6 -1.6] 13872 430: [6.4 -1.6 0.8] 3954.1 430: [8.8 -1.6 0.8] 1244.73 * 430: [11.2 -1.6 0.8] 1300.61 430: [13.6 -1.6 0.8] 4226.79 430: [6.4 0.8 0.8] 3466.53 430: [8.8 0.8 0.8] 715.907 * 430: [11.2 0.8 0.8] 742.224 430: [13.6 0.8 0.8] 3663.89 430: [6.4 3.2 0.8] 6031.02 430: [8.8 3.2 0.8] 3418.24 430: [11.2 3.2 0.8] 3594.38 430: [13.6 3.2 0.8] 6613.31 430: [6.4 5.6 0.8] 11844.3 430: [8.8 5.6 0.8] 9554.72 430: [11.2 5.6 0.8] 10071.8 430: [13.6 5.6 0.8] 13302.2 430: [6.4 -1.6 3.2] 6520.93 430: [8.8 -1.6 3.2] 3949.58 430: [11.2 -1.6 3.2] 4155.43 430: [13.6 -1.6 3.2] 7178.92 430: [6.4 0.8 3.2] 6031.02 430: [8.8 0.8 3.2] 3418.24 430: [11.2 0.8 3.2] 3594.38 430: [13.6 0.8 3.2] 6613.31 430: [6.4 3.2 3.2] 8673.76 430: [8.8 3.2 3.2] 6203.3 430: [11.2 3.2 3.2] 6533.85 430: [13.6 3.2 3.2] 9652.77 430: [6.4 5.6 3.2] 14655.7 430: [8.8 5.6 3.2] 12518.1 430: [11.2 5.6 3.2] 13199.5 430: [13.6 5.6 3.2] 16535.7 430: [6.4 -1.6 5.6] 12337.8 430: [8.8 -1.6 5.6] 10089.9 430: [11.2 -1.6 5.6] 10636.9 430: [13.6 -1.6 5.6] 13872 430: [6.4 0.8 5.6] 11844.3 430: [8.8 0.8 5.6] 9554.72 430: [11.2 0.8 5.6] 10071.8 430: [13.6 0.8 5.6] 13302.2 430: [6.4 3.2 5.6] 14655.7 430: [8.8 3.2 5.6] 12518.1 430: [11.2 3.2 5.6] 13199.5 430: [13.6 3.2 5.6] 16535.7 430: [6.4 5.6 5.6] 20999.9 430: [8.8 5.6 5.6] 19216 430: [11.2 5.6 5.6] 20269.6 430: [13.6 5.6 5.6] 23835.8 430: [2] xf_out->m_type = 1, xf_in->m_type = 1 430: ** Registration worker thread finished. 430: Warping... 430: plm_warp_itk: xform_to_itk_vf 430: plm_warp_itk: convert_to_itk 430: plm_warp_itk: warping... 430: Saving image... 430: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.mha 430: Load: 0.120899 430: Run: 1.90168 430: Save: 0.0139759 430: Total: 2.03655 430: Finished! 430: 430: STDERR: 430: Not an error 188/578 Test #137: plm-add-vf-a-stats .................... Passed 0.40 sec 189/578 Test #430: plm-reg-trans-b ....................... Passed 2.44 sec 120: RETVAL: 0 120: STDOUT: MIN -1000.000122 AVE -992.005493 MAX 0.000000 NONZERO 54512 NUMVOX 54872 120: 120: STDERR: 120: Not an error test 203 Start 203: plm-convert-dicom-donut-b-stats 203: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 203: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 203: Test timeout computed to be: 1500 test 207 Start 207: plm-convert-cxt-stats 207: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-cxt-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 207: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 207: Test timeout computed to be: 1500 131: RETVAL: 0 131: STDOUT: MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872 131: 131: STDERR: 131: Not an error 190/578 Test #120: landmark-warp-b-stats-1 ............... Passed 0.50 sec test 209 Start 209: plm-convert-prefix-fcsv 209: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-prefix-fcsv" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7-list.txt;--output-prefix-fcsv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv;--simplify-perc;0.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 209: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 209: Test timeout computed to be: 1500 191/578 Test #131: plm-add-a-stats ....................... Passed 0.46 sec test 211 Start 211: plm-convert-dose-scale-stats 211: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dose-scale-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 211: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 211: Test timeout computed to be: 1500 200: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 200: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-ss.nrrd 200: EXPECTED_ERRNO is 203: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 203: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-ss.nrrd 203: EXPECTED_ERRNO is 134: RETVAL: 0 134: STDOUT: MIN -500.000000 AVE -500.000000 MAX -500.000000 NONZERO 54872 NUMVOX 54872 134: 134: STDERR: 134: Not an error 152: RETVAL: 0 152: STDOUT: MIN -800.000000 AVE -782.961060 MAX -600.000000 NONZERO 54872 NUMVOX 54872 152: 152: STDERR: 152: Not an error 192/578 Test #134: plm-add-b-stats ....................... Passed 0.47 sec 207: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 207: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt.mha 207: EXPECTED_ERRNO is test 214 Start 214: plm-crop-a-stats 214: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=header;plm-crop-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 214: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 214: Test timeout computed to be: 1500 209: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 209: PARMS is convert;--input-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7-list.txt;--output-prefix-fcsv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv;--simplify-perc;0.5 209: EXPECTED_ERRNO is 146: RETVAL: 0 146: STDOUT: MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872 146: 146: STDERR: 146: Not an error 125: RETVAL: 0 125: STDOUT: MIN -1000.000122 AVE -991.665894 MAX 0.000000 NONZERO 54484 NUMVOX 54872 125: 125: STDERR: 125: Not an error 158: RETVAL: 0 158: STDOUT: MIN -0.107574 AVE -0.019504 MAX 0.207060 NONZERO 54872 NUMVOX 54872 158: 158: STDERR: 158: Not an error 193/578 Test #125: landmark-warp-c-stats-1 ............... Passed 0.52 sec 194/578 Test #152: plm-adjust-d-stats .................... Passed 0.37 sec test 217 Start 217: plm-crop-b-stats 217: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=header;plm-crop-b.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 217: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 217: Test timeout computed to be: 1500 test 220 Start 220: plm-crop-c-stats 220: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-crop-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=header;plm-crop-c.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 220: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 220: Test timeout computed to be: 1500 167: RETVAL: 0 167: STDOUT: MIN -1000.000000 AVE -921.594055 MAX -4.987521 NONZERO 54872 NUMVOX 54872 167: 167: STDERR: 167: Not an error 195/578 Test #146: plm-adjust-b-stats .................... Passed 0.41 sec 196/578 Test #158: plm-adjust-f-stats .................... Passed 0.37 sec 197/578 Test #167: plm-adjust-i-stats .................... Passed 0.34 sec test 222 Start 222: plm-dice-a 222: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 222: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 222: Test timeout computed to be: 1500 test 224 Start 224: plm-dice-b 224: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 224: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 224: Test timeout computed to be: 1500 test 226 Start 226: plm-dice-c 226: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--hausdorff;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 226: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 226: Test timeout computed to be: 1500 217: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 217: PARMS is header;plm-crop-b.mha 217: EXPECTED_ERRNO is 211: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 211: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale.mha 211: EXPECTED_ERRNO is 127: RETVAL: 0 127: STDOUT: Min: -27.760 -0.518 -0.000 127: Mean: -1.562 0.019 0.000 127: Max: -0.000 1.063 0.000 127: Mean abs: 1.562 0.037 0.000 127: Ave len: 1.563 127: Jacobian: MINJAC 0.698803 MAXJAC 1.18578 127: Energy: MINDIL -0.302 MAXDIL 0.186636 127: MAXSTRAIN 0.205 TOTSTRAIN 143.999 127: Second derivatives: MINSECDER 2.31e-17 MAXSECDER 0.0141 127: AVESECDER 0.000315 INTSECDER 3.94e+04 127: Max second derivative at: (17 22 16) 127: 127: STDERR: 127: Not an error 214: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 214: PARMS is header;plm-crop-a.mha 214: EXPECTED_ERRNO is 198/578 Test #127: landmark-warp-c-stats-2 ............... Passed 0.55 sec 220: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 220: PARMS is header;plm-crop-c.mha 220: EXPECTED_ERRNO is test 232 Start 232: plm-dice-d 232: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--hausdorff;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 232: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 232: Test timeout computed to be: 1500 122: RETVAL: 0 122: STDOUT: Min: -30.672 -0.800 -0.000 122: Mean: -1.500 0.018 0.000 122: Max: 0.000 1.506 0.000 122: Mean abs: 1.500 0.042 0.000 122: Ave len: 1.502 122: Jacobian: MINJAC 0.647844 MAXJAC 1.23013 122: Energy: MINDIL -0.353 MAXDIL 0.231386 122: MAXSTRAIN 0.259 TOTSTRAIN 179.715 122: Second derivatives: MINSECDER 0 MAXSECDER 0.0443 122: AVESECDER 0.000472 INTSECDER 5.89e+04 122: Max second derivative at: (17 23 15) 122: 122: STDERR: 122: Not an error 226: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 226: PARMS is dice;--hausdorff;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha 226: EXPECTED_ERRNO is 199/578 Test #122: landmark-warp-b-stats-2 ............... Passed 0.61 sec 224: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 224: PARMS is dice;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-9.mha 224: EXPECTED_ERRNO is test 238 Start 238: plm-dice-e 238: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--all;--zcrop;0 0;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 238: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 238: Test timeout computed to be: 1500 191: RETVAL: 0 191: STDOUT: Reading input file: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-dicom/image0000.dcm 191: Specific Character Set = ISO_IR 100 191: Image Type = DERIVED\SECONDARY\AXIAL 191: Instance Creation Date = 20260215 191: Instance Creation Time = 221810 191: SOP Class UID = 1.2.840.10008.5.1.4.1.1.2 191: SOP Instance UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.1149315.1771237091.447615 191: Study Date = 20260215 191: Series Date = 191: Study Time = 221810 191: Series Time = 191: Accession Number = 191: Modality = CT 191: Manufacturer = Plastimatch 191: Referring Physician's Name = 191: Station Name = 191: Study Description = 191: Series Description = 191: Operators' Name = 191: Manufacturer's Model Name = Plastimatch 191: Patient's Name = ANONYMOUS 191: Patient ID = PL977996017310804 191: Patient's Birth Date = 191: Patient's Sex = O 191: Slice Thickness = 13.157895 191: KVP = 191: Device Serial Number = 191: Software Version(s) = 1.9.4 191: Patient Position = FFS 191: Study Instance UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.1149315.1771237091.447595 191: Series Instance UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.1149315.1771237091.447612 191: Study ID = 191: Series Number = 191: Acquisition Number = 191: Instance Number = 0 191: Image Position (Patient) = -243.421051\-243.421051\-243.421051 191: Image Orientation (Patient) = 1.000000\0.000000\0.000000\0.000000\1.000000\0.000000 191: Frame of Reference UID = 1.2.826.0.1.3680043.8.274.1.1.8323329.1149315.1771237091.447596 191: Position Reference Indicator = SP 191: Slice Location = -243.421051 191: Samples per Pixel = 1 191: Photometric Interpretation = MONOCHROME2 191: Rows = 38 191: Columns = 38 191: Pixel Spacing = 13.157895\13.157895 191: Bits Allocated = 16 191: Bits Stored = 16 191: High Bit = 15 191: Pixel Representation = 1 191: Window Center = 40 191: Window Width = 400 191: Rescale Intercept = -1000.000000 191: Rescale Slope = 1.000000 191: Rescale Type = HU 191: 191: STDERR: 191: Not an error 170: RETVAL: 0 170: STDOUT: MIN -1000.000000 AVE -921.627502 MAX -4.987521 NONZERO 54872 NUMVOX 54872 170: 170: STDERR: 170: Not an error 222: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 222: PARMS is dice;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha 222: EXPECTED_ERRNO is 200/578 Test #191: plm-convert-dicom-b-stats ............. Passed 0.20 sec test 241 Start 241: plm-dice-f 241: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dice-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dice;--all;--zcrop;10 10;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 241: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 241: Test timeout computed to be: 1500 238: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 238: PARMS is dice;--all;--zcrop;0 0;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd 238: EXPECTED_ERRNO is 201/578 Test #170: plm-adjust-j-stats .................... Passed 0.42 sec test 245 Start 245: plm-dmap-b 245: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dmap-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dmap;--algorithm;danielsson;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha;--absolute-distance" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 245: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 245: Test timeout computed to be: 1500 232: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 232: PARMS is dice;--hausdorff;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-6.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-8.mha 232: EXPECTED_ERRNO is 176: RETVAL: 0 176: STDOUT: MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000 176: 176: STDERR: 176: Not an error 202/578 Test #176: plm-boundary-b-stats .................. Passed 0.35 sec test 247 Start 247: plm-dvh-a 247: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dvh-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-dose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 247: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 247: Test timeout computed to be: 1500 245: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 245: PARMS is dmap;--algorithm;danielsson;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha;--absolute-distance 245: EXPECTED_ERRNO is 241: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 241: PARMS is dice;--all;--zcrop;10 10;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-2.nrrd;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/cyl-3.nrrd 241: EXPECTED_ERRNO is 161: RETVAL: 0 161: STDOUT: MIN -0.025301 AVE -0.000000 MAX 0.287606 NONZERO 54872 NUMVOX 54872 161: 161: STDERR: 161: Not an error 143: RETVAL: 0 143: STDOUT: MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872 143: 143: STDERR: 143: Not an error 173: RETVAL: 0 173: STDOUT: MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000 173: 173: STDERR: 203/578 Test #161: plm-adjust-g-stats .................... Passed 0.49 sec test 250 Start 250: plm-dvh-b 250: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dvh-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt;--input-dose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 250: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 250: Test timeout computed to be: 1500 173: Not an error 179: RETVAL: 0 179: STDOUT: MIN 0.000000 AVE 0.105000 MAX 1.000000 NONZERO 840 NUMVOX 8000 179: 179: STDERR: 179: Not an error 204/578 Test #143: plm-adjust-a-stats .................... Passed 0.56 sec 205/578 Test #173: plm-boundary-a-stats .................. Passed 0.46 sec test 253 Start 253: plm-dvh-c 253: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dvh-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dvh;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-csv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 253: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 253: Test timeout computed to be: 1500 test 257 Start 257: plm-fill-a-stats 257: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-fill-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 257: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 257: Test timeout computed to be: 1500 164: RETVAL: 0 164: STDOUT: MIN -0.283680 AVE -0.248078 MAX 0.156631 NONZERO 54872 NUMVOX 54872 164: 164: STDERR: 164: Not an error 149: RETVAL: 0 149: STDOUT: MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872 149: 149: STDERR: 149: Not an error 206/578 Test #164: plm-adjust-h-stats .................... Passed 0.51 sec 207/578 Test #179: plm-boundary-c-stats .................. Passed 0.39 sec 140: RETVAL: 0 140: STDOUT: Min: 5.000 5.000 0.000 140: Mean: 5.000 5.000 0.000 140: Max: 5.000 5.000 0.000 140: Mean abs: 5.000 5.000 0.000 140: Ave len: 7.071 140: Jacobian: MINJAC 1 MAXJAC 1 140: Energy: MINDIL 0 MAXDIL 0 140: MAXSTRAIN 0 TOTSTRAIN 0 140: Second derivatives: MINSECDER 0 MAXSECDER 0 140: AVESECDER 0 INTSECDER 0 140: Max second derivative at: (1 1 1) 140: 140: STDERR: 140: Not an error 185: RETVAL: 0 185: STDOUT: MIN 0.000000 AVE 2.142000 MAX 56.000000 NONZERO 840 NUMVOX 8000 185: 185: STDERR: 185: Not an error test 260 Start 260: plm-mask-a-stats 260: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-mask-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 260: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 260: Test timeout computed to be: 1500 test 263 Start 263: plm-gamma-a-stats 263: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 263: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 263: Test timeout computed to be: 1500 247: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 247: PARMS is dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-dose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv 247: EXPECTED_ERRNO is 253: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 253: PARMS is dvh;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom;--output-csv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv 253: EXPECTED_ERRNO is 250: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 250: PARMS is dvh;--input-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt;--input-dose;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dose-img.mha;--output-csv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv 250: EXPECTED_ERRNO is 208/578 Test #140: plm-add-vf-b-stats .................... Passed 0.63 sec 209/578 Test #149: plm-adjust-c-stats .................... Passed 0.59 sec 210/578 Test #185: plm-boundary-e-stats .................. Passed 0.35 sec 155: RETVAL: 0 155: STDOUT: MIN -1500.000000 AVE -1298.865601 MAX 987.531189 NONZERO 54872 NUMVOX 54872 155: 155: STDERR: test 266 Start 266: plm-gamma-b-stats 266: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 266: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 266: Test timeout computed to be: 1500 test 268 Start 268: plm-gamma-c 268: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 268: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 268: Test timeout computed to be: 1500 test 270 Start 270: plm-gamma-d 270: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-gamma-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=gamma;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.mha;--ref-only-threshold;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 270: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 270: Test timeout computed to be: 1500 155: Not an error 427: RETVAL: 0 427: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 427: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 427: Launching registration worker thread 427: Inside registration worker thread 427: Doing registration stage 427: [1] xf_in->m_type = 0, xf_out->m_type = 0 427: RESAMPLE 1 1: (1 1 1), (1 1 1) 427: RESAMPLE 1 1: (1 1 1), (1 1 1) 427: volume_calc_grad complete. 427: Computing grid search extent. 427: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) 427: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) 427: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) 427: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) 427: [0 0 0] 18945.9 * 427: Global grid search 427: [-10 -10 -10] 109949 427: [-6 -10 -10] 96800 427: [-2 -10 -10] 79011.9 427: [2 -10 -10] 66244.1 427: [6 -10 -10] 61932.6 427: [10 -10 -10] 63642.7 427: [-10 -6 -10] 95633.9 427: [-6 -6 -10] 81703.4 427: [-2 -6 -10] 63642.4 427: [2 -6 -10] 49838.6 427: [6 -6 -10] 43366.8 427: [10 -6 -10] 43154 427: [-10 -2 -10] 84842.6 427: [-6 -2 -10] 71049.9 427: [-2 -2 -10] 53542.3 427: [2 -2 -10] 39751 427: [6 -2 -10] 32450.7 427: [10 -2 -10] 31286.8 427: [-10 2 -10] 84829.9 427: [-6 2 -10] 71041.2 427: [-2 2 -10] 53536.6 427: [2 2 -10] 39746.7 427: [6 2 -10] 32446.9 427: [10 2 -10] 31283.5 427: [-10 6 -10] 95561.4 427: [-6 6 -10] 81658.4 427: [-2 6 -10] 63613.3 427: [2 6 -10] 49813.8 427: [6 6 -10] 43342.5 427: [10 6 -10] 43131.5 427: [-10 10 -10] 109668 427: [-6 10 -10] 96633.8 427: [-2 10 -10] 78907 427: [2 10 -10] 66152.1 427: [6 10 -10] 61839.3 427: [10 10 -10] 63556.7 427: [-10 -10 -6] 95633.9 427: [-6 -10 -6] 81703.4 427: [-2 -10 -6] 63642.4 427: [2 -10 -6] 49838.6 427: [6 -10 -6] 43366.8 427: [10 -10 -6] 43154 427: [-10 -6 -6] 82028.8 427: [-6 -6 -6] 67247.9 427: [-2 -6 -6] 48818.3 427: [2 -6 -6] 33916.9 427: [6 -6 -6] 25278 427: [10 -6 -6] 23165.8 427: [-10 -2 -6] 72112.1 427: [-6 -2 -6] 57467.9 427: [-2 -2 -6] 39558.4 427: [2 -2 -6] 24681.2 427: [6 -2 -6] 15293.3 * 427: [10 -2 -6] 12314.7 * 427: [-10 2 -6] 72100.9 427: [-6 2 -6] 57460.6 427: [-2 2 -6] 39554 427: [2 2 -6] 24678.2 427: [6 2 -6] 15291.1 427: [10 2 -6] 12313 * 427: [-10 6 -6] 81963.5 427: [-6 6 -6] 67208.4 427: [-2 6 -6] 48793.6 427: [2 6 -6] 33896.7 427: [6 6 -6] 25258.7 427: [10 6 -6] 23148.6 427: [-10 10 -6] 95379.4 427: [-6 10 -6] 81554.8 427: [-2 10 -6] 63550.9 427: [2 10 -6] 49759.6 427: [6 10 -6] 43287.7 427: [10 10 -6] 43082.4 427: [-10 -10 -2] 84842.6 427: [-6 -10 -2] 71049.9 427: [-2 -10 -2] 53542.3 427: [2 -10 -2] 39751 427: [6 -10 -2] 32450.7 427: [10 -10 -2] 31286.8 427: [-10 -6 -2] 72112.1 427: [-6 -6 -2] 57467.9 427: [-2 -6 -2] 39558.4 427: [2 -6 -2] 24681.2 427: [6 -6 -2] 15293.3 427: [10 -6 -2] 12314.7 427: [-10 -2 -2] 63010.9 427: [-6 -2 -2] 48498.1 427: [-2 -2 -2] 31072.4 427: [2 -2 -2] 16224.1 427: [6 -2 -2] 6155.79 * 427: [10 -2 -2] 2386.22 * 427: [-10 2 -2] 63000.9 427: [-6 2 -2] 48491.8 427: [-2 2 -2] 31068.8 427: [2 2 -2] 16221.9 427: [6 2 -2] 6154.44 427: [10 2 -2] 2385.44 * 427: [-10 6 -2] 72052.8 427: [-6 6 -2] 57432.4 427: [-2 6 -2] 39536.8 427: [2 6 -2] 24663.8 427: [6 6 -2] 15277.1 427: [10 6 -2] 12300.5 427: [-10 10 -2] 84610.1 427: [-6 10 -2] 70915.1 427: [-2 10 -2] 53460.4 427: [2 10 -2] 39681 427: [6 10 -2] 32381 427: [10 10 -2] 31224.4 427: [-10 -10 2] 84829.9 427: [-6 -10 2] 71041.2 427: [-2 -10 2] 53536.6 427: [2 -10 2] 39746.7 427: [6 -10 2] 32446.9 427: [10 -10 2] 31283.5 427: [-10 -6 2] 72100.9 427: [-6 -6 2] 57460.6 427: [-2 -6 2] 39554 427: [2 -6 2] 24678.2 427: [6 -6 2] 15291.1 427: [10 -6 2] 12313 427: [-10 -2 2] 63000.9 427: [-6 -2 2] 48491.8 427: [-2 -2 2] 31068.8 427: [2 -2 2] 16221.9 427: [6 -2 2] 6154.44 427: [10 -2 2] 2385.44 427: [-10 2 2] 62990.9 427: [-6 2 2] 48485.5 427: [-2 2 2] 31065.2 427: [2 2 2] 16219.7 427: [6 2 2] 6153.1 427: [10 2 2] 2384.66 * 427: [-10 6 2] 72041.7 427: [-6 6 2] 57425.2 427: [-2 6 2] 39532.4 427: [2 6 2] 24660.8 427: [6 6 2] 15274.9 427: [10 6 2] 12298.9 427: [-10 10 2] 84597.7 427: [-6 10 2] 70906.7 427: [-2 10 2] 53454.9 427: [2 10 2] 39676.9 427: [6 10 2] 32377.5 427: [10 10 2] 31221.4 427: [-10 -10 6] 95561.4 427: [-6 -10 6] 81658.4 427: [-2 -10 6] 63613.3 427: [2 -10 6] 49813.8 427: [6 -10 6] 43342.5 427: [10 -10 6] 43131.5 427: [-10 -6 6] 81963.5 427: [-6 -6 6] 67208.4 427: [-2 -6 6] 48793.6 427: [2 -6 6] 33896.7 427: [6 -6 6] 25258.7 427: [10 -6 6] 23148.6 427: [-10 -2 6] 72052.8 427: [-6 -2 6] 57432.4 427: [-2 -2 6] 39536.8 427: [2 -2 6] 24663.8 427: [6 -2 6] 15277.1 427: [10 -2 6] 12300.5 427: [-10 2 6] 72041.7 427: [-6 2 6] 57425.2 427: [-2 2 6] 39532.4 427: [2 2 6] 24660.8 427: [6 2 6] 15274.9 427: [10 2 6] 12298.9 427: [-10 6 6] 81898.9 427: [-6 6 6] 67169.4 427: [-2 6 6] 48769.5 427: [2 6 6] 33876.9 427: [6 6 6] 25240 427: [10 6 6] 23132 427: [-10 10 6] 95309.5 427: [-6 10 6] 81512.3 427: [-2 10 6] 63524.1 427: [2 10 6] 49737.2 427: [6 10 6] 43266 427: [10 10 6] 43062.8 427: [-10 -10 10] 109668 427: [-6 -10 10] 96633.8 427: [-2 -10 10] 78907 427: [2 -10 10] 66152.1 427: [6 -10 10] 61839.3 427: [10 -10 10] 63556.7 427: [-10 -6 10] 95379.4 427: [-6 -6 10] 81554.8 427: [-2 -6 10] 63550.9 427: [2 -6 10] 49759.6 427: [6 -6 10] 43287.7 427: [10 -6 10] 43082.4 427: [-10 -2 10] 84610.1 427: [-6 -2 10] 70915.1 427: [-2 -2 10] 53460.4 427: [2 -2 10] 39681 427: [6 -2 10] 32381 427: [10 -2 10] 31224.4 427: [-10 2 10] 84597.7 427: [-6 2 10] 70906.7 427: [-2 2 10] 53454.9 427: [2 2 10] 39676.9 427: [6 2 10] 32377.5 427: [10 2 10] 31221.4 427: [-10 6 10] 95309.5 427: [-6 6 10] 81512.3 427: [-2 6 10] 63524.1 427: [2 6 10] 49737.2 427: [6 6 10] 43266 427: [10 6 10] 43062.8 427: [-10 10 10] 109399 427: [-6 10 10] 96478.4 427: [-2 10 10] 78812.5 427: [2 10 10] 66070.4 427: [6 10 10] 61757.4 427: [10 10 10] 63483 427: [2] xf_out->m_type = 1, xf_in->m_type = 0 427: [1] xf_in->m_type = 1, xf_out->m_type = 0 427: RESAMPLE 1 1: (1 1 1), (1 1 1) 427: RESAMPLE 1 1: (1 1 1), (1 1 1) 427: volume_calc_grad complete. 427: Computing grid search extent. 427: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) 427: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) 427: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) 427: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) 427: [10 2 2] 2384.66 * 427: Local grid search 427: [6.4 -1.6 -1.6] 4439.65 427: [8.8 -1.6 -1.6] 1771.35 * 427: [11.2 -1.6 -1.6] 1856.67 427: [13.6 -1.6 -1.6] 4787.36 427: [6.4 0.8 -1.6] 3954.1 427: [8.8 0.8 -1.6] 1244.73 * 427: [11.2 0.8 -1.6] 1300.61 427: [13.6 0.8 -1.6] 4226.79 427: [6.4 3.2 -1.6] 6520.93 427: [8.8 3.2 -1.6] 3949.58 427: [11.2 3.2 -1.6] 4155.43 427: [13.6 3.2 -1.6] 7178.92 427: [6.4 5.6 -1.6] 12337.8 427: [8.8 5.6 -1.6] 10089.9 427: [11.2 5.6 -1.6] 10636.9 427: [13.6 5.6 -1.6] 13872 427: [6.4 -1.6 0.8] 3954.1 427: [8.8 -1.6 0.8] 1244.73 * 427: [11.2 -1.6 0.8] 1300.61 427: [13.6 -1.6 0.8] 4226.79 427: [6.4 0.8 0.8] 3466.53 427: [8.8 0.8 0.8] 715.907 * 427: [11.2 0.8 0.8] 742.224 427: [13.6 0.8 0.8] 3663.89 427: [6.4 3.2 0.8] 6031.02 427: [8.8 3.2 0.8] 3418.24 427: [11.2 3.2 0.8] 3594.38 427: [13.6 3.2 0.8] 6613.31 427: [6.4 5.6 0.8] 11844.3 427: [8.8 5.6 0.8] 9554.72 427: [11.2 5.6 0.8] 10071.8 427: [13.6 5.6 0.8] 13302.2 427: [6.4 -1.6 3.2] 6520.93 427: [8.8 -1.6 3.2] 3949.58 427: [11.2 -1.6 3.2] 4155.43 427: [13.6 -1.6 3.2] 7178.92 427: [6.4 0.8 3.2] 6031.02 427: [8.8 0.8 3.2] 3418.24 427: [11.2 0.8 3.2] 3594.38 427: [13.6 0.8 3.2] 6613.31 427: [6.4 3.2 3.2] 8673.76 427: [8.8 3.2 3.2] 6203.3 427: [11.2 3.2 3.2] 6533.85 427: [13.6 3.2 3.2] 9652.77 427: [6.4 5.6 3.2] 14655.7 427: [8.8 5.6 3.2] 12518.1 427: [11.2 5.6 3.2] 13199.5 427: [13.6 5.6 3.2] 16535.7 427: [6.4 -1.6 5.6] 12337.8 427: [8.8 -1.6 5.6] 10089.9 427: [11.2 -1.6 5.6] 10636.9 427: [13.6 -1.6 5.6] 13872 427: [6.4 0.8 5.6] 11844.3 427: [8.8 0.8 5.6] 9554.72 427: [11.2 0.8 5.6] 10071.8 427: [13.6 0.8 5.6] 13302.2 427: [6.4 3.2 5.6] 14655.7 427: [8.8 3.2 5.6] 12518.1 427: [11.2 3.2 5.6] 13199.5 427: [13.6 3.2 5.6] 16535.7 427: [6.4 5.6 5.6] 20999.9 427: [8.8 5.6 5.6] 19216 427: [11.2 5.6 5.6] 20269.6 427: [13.6 5.6 5.6] 23835.8 427: [2] xf_out->m_type = 1, xf_in->m_type = 1 427: ** Registration worker thread finished. 427: Warping... 427: plm_warp_itk: xform_to_itk_vf 427: plm_warp_itk: convert_to_itk 427: plm_warp_itk: warping... 427: Saving image... 427: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.mha 427: Load: 0.12745 427: Run: 2.09872 427: Save: 0.012428 427: Total: 2.2386 427: Finished! 427: 427: STDERR: 427: Not an error 257: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 257: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a.mha 257: EXPECTED_ERRNO is 108: RETVAL: 0 108: STDOUT: Reconstructing... 108: Processing image 0 108: Processing image 1 108: Processing image 2 108: Processing image 3 108: Processing image 4 108: Processing image 5 108: Processing image 6 108: Processing image 7 108: Processing image 8 108: Processing image 9 108: Processing image 10 108: Processing image 11 108: Processing image 12 108: Processing image 13 108: Processing image 14 108: Processing image 15 108: Processing image 16 108: Processing image 17 108: Processing image 18 108: Processing image 19 108: I/O time (total) = 0.00266576 108: I/O time (per image) = 0.000133288 108: Filter time = 0 108: Filter time (per image) = 0 108: Backprojection time = 1.20505 108: Backprojection time (per image) = 0.0602524 108: Writing output volume(s)... 108: done. 108: 108: 108: STDERR: 108: Not an error 211/578 Test #427: plm-reg-trans-a ....................... Passed 2.79 sec 212/578 Test #155: plm-adjust-e-stats .................... Passed 0.60 sec 213/578 Test #108: fdk-cpu-a ............................. Passed 1.63 sec 260: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 260: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a.mha 260: EXPECTED_ERRNO is test 273 Start 273: plm-maximum-a-stats 273: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-maximum-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 273: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 273: Test timeout computed to be: 1500 test 276 Start 276: plm-multiply-a-stats 276: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 276: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 276: Test timeout computed to be: 1500 test 109 Start 109: fdk-cpu-a-stats 109: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 109: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 109: Test timeout computed to be: 1500 263: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 263: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a.mha 263: EXPECTED_ERRNO is 266: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 266: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b.mha 266: EXPECTED_ERRNO is 200: RETVAL: 0 200: STDOUT: SS_IMAGE: At most 16 structures 200: S 0 NVOX 2623 200: S 1 NVOX 0 200: S 2 NVOX 0 200: S 3 NVOX 0 200: S 4 NVOX 0 200: S 5 NVOX 0 200: S 6 NVOX 0 200: S 7 NVOX 0 200: S 8 NVOX 0 200: S 9 NVOX 0 200: S 10 NVOX 0 200: S 11 NVOX 0 200: S 12 NVOX 0 200: S 13 NVOX 0 200: S 14 NVOX 0 200: S 15 NVOX 0 200: 200: STDERR: 200: Not an error 268: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 268: PARMS is gamma;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha 268: EXPECTED_ERRNO is 270: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 270: PARMS is gamma;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.mha;--ref-only-threshold;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-03.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-04.mha 270: EXPECTED_ERRNO is 214/578 Test #200: plm-convert-dicom-donut-a-stats ....... Passed 0.33 sec test 279 Start 279: plm-multiply-vf-a-stats 279: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-multiply-vf-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 279: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 279: Test timeout computed to be: 1500 273: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 273: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a.nrrd 273: EXPECTED_ERRNO is 276: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 276: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a.nrrd 276: EXPECTED_ERRNO is 109: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 109: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a.mha 109: EXPECTED_ERRNO is 279: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 279: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a.nrrd 279: EXPECTED_ERRNO is 182: RETVAL: 0 182: STDOUT: MIN 0.000000 AVE 2.614500 MAX 56.000000 NONZERO 1056 NUMVOX 8000 182: 182: STDERR: 182: Not an error 220: RETVAL: 0 220: STDOUT: Type = float 220: Planes = 1 220: Origin = -9.2105 -9.2105 -9.2105 220: Size = 15 15 15 220: Spacing = 1.3158 1.3158 1.3158 220: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 220: 220: STDERR: 220: Not an error 214: RETVAL: 0 214: STDOUT: Type = float 214: Planes = 1 214: Origin = -18.4211 -21.0526 -15.7895 214: Size = 11 16 3 214: Spacing = 1.3158 1.3158 1.3158 214: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 214: 214: STDERR: 215/578 Test #182: plm-boundary-d-stats .................. Passed 0.52 sec test 283 Start 283: plm-reg-align-center-stats 283: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-align-center-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=compare;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 283: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 283: Test timeout computed to be: 1500 214: Not an error 203: RETVAL: 0 203: STDOUT: SS_IMAGE: At most 16 structures 203: S 0 NVOX 1924 203: S 1 NVOX 0 203: S 2 NVOX 0 203: S 3 NVOX 0 203: S 4 NVOX 0 203: S 5 NVOX 0 203: S 6 NVOX 0 203: S 7 NVOX 0 203: S 8 NVOX 0 203: S 9 NVOX 0 203: S 10 NVOX 0 203: S 11 NVOX 0 203: S 12 NVOX 0 203: S 13 NVOX 0 203: S 14 NVOX 0 203: S 15 NVOX 0 203: 203: STDERR: 203: Not an error 188: RETVAL: 0 188: STDOUT: SS_IMAGE: At most 16 structures 188: S 0 NVOX 1648003 188: S 1 NVOX 0 188: S 2 NVOX 0 188: S 3 NVOX 0 188: S 4 NVOX 0 188: S 5 NVOX 0 188: S 6 NVOX 0 188: S 7 NVOX 0 188: S 8 NVOX 0 188: S 9 NVOX 0 188: S 10 NVOX 0 188: S 11 NVOX 0 188: S 12 NVOX 0 188: S 13 NVOX 0 188: S 14 NVOX 0 188: S 15 NVOX 0 188: 188: STDERR: 217: RETVAL: 0 217: STDOUT: Type = float 217: Planes = 1 217: Origin = -14.4737 3.9474 -11.8421 217: Size = 19 11 4 217: Spacing = 1.3158 1.3158 1.3158 217: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 217: 217: STDERR: 216/578 Test #203: plm-convert-dicom-donut-b-stats ....... Passed 0.42 sec 217/578 Test #214: plm-crop-a-stats ...................... Passed 0.37 sec 218/578 Test #220: plm-crop-c-stats ...................... Passed 0.35 sec 222: RETVAL: 0 222: STDOUT: CENTER_OF_MASS 222: ref 4.18425e-05 7.62939e-06 7.62939e-06 222: cmp 19.7369 7.62939e-06 7.62939e-06 222: TP: 384 222: TN: 54296 222: FN: 128 222: FP: 64 222: DICE: 0.800000 222: SE: 0.750000 222: SP: 0.998823 222: 222: STDERR: test 286 Start 286: plm-reg-itk-translation-stats 286: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-translation-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 286: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 286: Test timeout computed to be: 1500 test 289 Start 289: plm-reg-itk-rigid-a-stats-1 289: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-rigid-a-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-intermediate-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 289: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 289: Test timeout computed to be: 1500 test 291 Start 291: plm-reg-itk-rigid-a-stats-2 291: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-rigid-a-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 291: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 291: Test timeout computed to be: 1500 226: RETVAL: 0 226: STDOUT: Hausdorff distance = 26.315790 226: Avg average Hausdorff distance = 3.406955 226: Max average Hausdorff distance = 4.934211 226: Percent (0.95) Hausdorff distance = 19.736843 226: Hausdorff distance (boundary) = 26.315790 226: Avg average Hausdorff distance (boundary) = 7.115030 226: Max average Hausdorff distance (boundary) = 8.534851 226: Percent (0.95) Hausdorff distance (boundary) = 26.315790 226: 226: STDERR: 226: Not an error 222: Not an error 217: Not an error 207: RETVAL: 0 207: STDOUT: SS_IMAGE: At most 16 structures 207: S 0 NVOX 1648003 207: S 1 NVOX 0 207: S 2 NVOX 0 207: S 3 NVOX 0 207: S 4 NVOX 0 207: S 5 NVOX 0 207: S 6 NVOX 0 207: S 7 NVOX 0 207: S 8 NVOX 0 207: S 9 NVOX 0 207: S 10 NVOX 0 207: S 11 NVOX 0 207: S 12 NVOX 0 207: S 13 NVOX 0 207: S 14 NVOX 0 207: S 15 NVOX 0 207: 207: STDERR: 207: Not an error 188: Not an error 283: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 283: PARMS is compare;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-img.mha 283: EXPECTED_ERRNO is 97: RETVAL: 0 97: STDOUT: Fixed = /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 97: Moving = /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 97: 97: Reading the static/reference image 97: reading /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 97: 97: Reading the moving image 97: reading /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 97: volume_calc_grad complete. 97: kerx: 0.1629140526 0.2174074054 0.2393570840 0.2174074054 0.1629140526 97: kery: 0.1629140526 0.2174074054 0.2393570840 0.2174074054 0.1629140526 97: kerz: 0.1629140526 0.2174074054 0.2393570840 0.2174074054 0.1629140526 97: MSE [ 0] 18945.6 (1.000) [ 0.021 secs] 97: MSE [ 1] 18945.6 (1.000) [ 0.012 secs] 97: MSE [ 2] 18980.9 (0.995) [ 0.020 secs] 97: MSE [ 3] 18885.4 (0.970) [ 0.021 secs] 97: MSE [ 4] 18084.9 (0.966) [ 0.018 secs] 97: MSE [ 5] 17034.7 (0.966) [ 0.016 secs] 97: MSE [ 6] 15346.9 (0.946) [ 0.016 secs] 97: MSE [ 7] 14427.2 (0.940) [ 0.022 secs] 97: MSE [ 8] 13561.7 (0.935) [ 0.027 secs] 97: MSE [ 9] 12732.2 (0.928) [ 0.009 secs] 97: MSE [ 10] 12276.6 (0.923) [ 0.013 secs] 97: MSE [ 11] 11827.4 (0.920) [ 0.013 secs] 97: MSE [ 12] 11399.6 (0.920) [ 0.011 secs] 97: MSE [ 13] 11078.4 (0.919) [ 0.012 secs] 97: MSE [ 14] 10787.4 (0.918) [ 0.013 secs] 97: MSE [ 15] 10317.6 (0.915) [ 0.008 secs] 97: MSE [ 16] 9735.2 (0.913) [ 0.009 secs] 97: MSE [ 17] 9362.8 (0.911) [ 0.017 secs] 97: MSE [ 18] 8947.5 (0.909) [ 0.011 secs] 97: MSE [ 19] 8534.4 (0.899) [ 0.009 secs] 97: MSE [ 20] 7953.5 (0.895) [ 0.008 secs] 97: MSE [ 21] 7656.6 (0.893) [ 0.008 secs] 97: MSE [ 22] 7364.0 (0.892) [ 0.008 secs] 97: MSE [ 23] 7174.2 (0.892) [ 0.008 secs] 97: MSE [ 24] 6956.3 (0.891) [ 0.017 secs] 97: MSE [ 25] 6512.1 (0.890) [ 0.012 secs] 97: MSE [ 26] 6079.0 (0.890) [ 0.010 secs] 97: MSE [ 27] 5716.1 (0.889) [ 0.009 secs] 97: MSE [ 28] 5454.8 (0.889) [ 0.010 secs] 97: MSE [ 29] 5201.5 (0.889) [ 0.010 secs] 97: MSE [ 30] 5013.3 (0.888) [ 0.009 secs] 97: MSE [ 31] 4840.3 (0.888) [ 0.017 secs] 97: MSE [ 32] 4652.0 (0.887) [ 0.014 secs] 97: MSE [ 33] 4400.6 (0.886) [ 0.018 secs] 97: MSE [ 34] 4085.1 (0.883) [ 0.017 secs] 97: MSE [ 35] 3778.0 (0.882) [ 0.019 secs] 97: MSE [ 36] 3521.6 (0.882) [ 0.018 secs] 97: MSE [ 37] 3308.2 (0.882) [ 0.029 secs] 97: MSE [ 38] 3126.2 (0.881) [ 0.020 secs] 97: MSE [ 39] 2988.9 (0.881) [ 0.014 secs] 97: MSE [ 40] 2836.4 (0.880) [ 0.019 secs] 97: MSE [ 41] 2736.6 (0.881) [ 0.018 secs] 97: MSE [ 42] 2623.3 (0.880) [ 0.018 secs] 97: MSE [ 43] 2426.1 (0.880) [ 0.022 secs] 97: MSE [ 44] 2271.4 (0.879) [ 0.016 secs] 97: MSE [ 45] 2112.0 (0.880) [ 0.007 secs] 97: MSE [ 46] 1926.2 (0.879) [ 0.024 secs] 97: MSE [ 47] 1775.3 (0.880) [ 0.017 secs] 97: MSE [ 48] 1621.0 (0.878) [ 0.013 secs] 97: MSE [ 49] 1504.3 (0.878) [ 0.008 secs] 97: Time for 50 iterations = 0.737959 (0.014759 sec / it) 97: Min: 1.248 -5.701 -5.701 97: Mean: 3.443 0.016 0.016 97: Max: 7.379 5.617 5.617 97: Mean abs: 3.443 1.874 1.874 97: Ave len: 4.646 97: Direction cosines: vin = 1.000000 0.000000 0.000000 ... 97: vf = 1.000000 0.000000 0.000000 ... 97: spac: vin = 1.315789 1.315789 1.315789 ... 97: vf = 1.315789 1.315789 1.315789 ... 97: proj: vin = 0.760000 -0.000000 0.000000 ... 97: vf = 0.760000 -0.000000 0.000000 ... 97: step: vin = 1.315789 0.000000 0.000000 ... 97: vf = 1.315789 0.000000 0.000000 ... 97: 97: STDERR: 97: Not an error 286: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 286: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-img.mha 286: EXPECTED_ERRNO is 219/578 Test #188: plm-convert-dicom-a-stats ............. Passed 0.53 sec 220/578 Test #207: plm-convert-cxt-stats ................. Passed 0.46 sec 221/578 Test #217: plm-crop-b-stats ...................... Passed 0.41 sec 222/578 Test #222: plm-dice-a ............................ Passed 0.38 sec 223/578 Test #226: plm-dice-c ............................ Passed 0.37 sec 224/578 Test #97: demons-a .............................. Passed 1.08 sec 232: RETVAL: 0 232: STDOUT: Hausdorff distance = 45.580288 232: Avg average Hausdorff distance = 7.072703 232: Max average Hausdorff distance = 12.121115 232: Percent (0.95) Hausdorff distance = 22.694012 232: Hausdorff distance (boundary) = 45.580288 232: Avg average Hausdorff distance (boundary) = 14.894061 232: Max average Hausdorff distance (boundary) = 18.384613 232: Percent (0.95) Hausdorff distance (boundary) = 32.894737 232: 232: STDERR: 232: Not an error test 294 Start 294: plm-reg-itk-similarity-stats-1 294: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-similarity-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-intermediate-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 294: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 294: Test timeout computed to be: 1500 test 296 Start 296: plm-reg-itk-similarity-stats-2 296: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-similarity-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 296: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 296: Test timeout computed to be: 1500 test 299 Start 299: plm-reg-itk-bspline-stats-1 299: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-bspline-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 299: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 299: Test timeout computed to be: 1500 test 303 Start 303: plm-reg-itk-demons-stats-2 303: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 303: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 303: Test timeout computed to be: 1500 test 305 Start 305: plm-reg-itk-demons-diff 305: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-diff" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 305: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 305: Test timeout computed to be: 1500 test 307 Start 307: plm-reg-itk-demons-logd 307: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-logd" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 307: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 307: Test timeout computed to be: 1500 291: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 291: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-img.mha 291: EXPECTED_ERRNO is 211: RETVAL: 0 211: STDOUT: MIN 0.000000 AVE 0.294533 MAX 77.699997 NONZERO 208 NUMVOX 54872 211: 211: STDERR: 211: Not an error 289: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 289: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-intermediate-img.mha 289: EXPECTED_ERRNO is 245: RETVAL: 0 245: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha 245: 245: STDERR: 245: Not an error 294: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 294: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-intermediate-img.mha 294: EXPECTED_ERRNO is 225/578 Test #211: plm-convert-dose-scale-stats .......... Passed 0.50 sec 226/578 Test #232: plm-dice-d ............................ Passed 0.42 sec test 309 Start 309: plm-reg-itk-demons-sym-logd 309: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-itk-demons-sym-logd" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 309: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 309: Test timeout computed to be: 1500 test 312 Start 312: plm-bsp-mse-c-stats 312: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 312: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 312: Test timeout computed to be: 1500 227/578 Test #245: plm-dmap-b ............................ Passed 0.38 sec 296: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 296: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-img.mha 296: EXPECTED_ERRNO is 303: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 303: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-img.mha 303: EXPECTED_ERRNO is 299: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 299: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-img.mha 299: EXPECTED_ERRNO is test 315 Start 315: plm-bsp-mse-g-stats 315: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-g-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 315: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 315: Test timeout computed to be: 1500 224: RETVAL: 0 224: STDOUT: Time = 0.012342 seconds 224: Time = 0.007392 seconds 224: CENTER_OF_MASS 224: ref 8.39233e-05 8.47711e-06 8.47711e-06 224: cmp 8.39233e-05 8.47711e-06 8.47711e-06 224: TP: 729 224: TN: 103094 224: FN: 0 224: FP: 0 224: DICE: 1.000000 224: SE: 1.000000 224: SP: 1.000000 224: 224: STDERR: 224: Not an error 305: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 305: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff.txt 305: EXPECTED_ERRNO is 307: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 307: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.txt 307: EXPECTED_ERRNO is 228/578 Test #224: plm-dice-b ............................ Passed 0.47 sec test 318 Start 318: plm-bsp-mse-h-stats 318: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-h-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 318: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 318: Test timeout computed to be: 1500 21: RETVAL: 0 21: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha 21: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix/Body.mha 21: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix/Tumor.mha 21: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-prefix/Lung.mha 21: Doing extraction 21: Keyholizing structure 0. 21: Keyholizing structure 1. 21: Keyholizing structure 2. 21: Write: DoseGridScaling = 0.000000 21: 21: STDERR: 21: Not an error 250: RETVAL: 0 250: STDOUT: Trying to load ss_list: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-ss-list.txt 250: Creating Histogram... 250: Your Histogram will have 256 bins and will be 0.500000 Gy large 250: checking voxel size... 250: 13.1579 13.1579 13.1579 250: 13.1579 13.1579 13.1579 250: Dose and ss-img have the same size. Resample not necessary. 250: 250: STDERR: 250: Not an error 309: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 309: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.txt 309: EXPECTED_ERRNO is 229/578 Test #21: lung-1 ................................ Passed 4.11 sec 230/578 Test #250: plm-dvh-b ............................. Passed 0.37 sec test 193 Start 193: plm-convert-dicom-c 193: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom/;--output-prefix;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 193: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 193: Test timeout computed to be: 1500 test 321 Start 321: plm-bsp-mse-i-stats 321: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-i-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 321: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 321: Test timeout computed to be: 1500 241: RETVAL: 0 241: STDOUT: CENTER_OF_MASS 241: ref 0 0 7.5 241: cmp 0 0 7.5 241: TP: 17380 241: TN: 4620 241: FN: 0 241: FP: 0 241: DICE: 1.000000 241: SE: 1.000000 241: SP: 1.000000 241: Hausdorff distance = 0.000000 241: Avg average Hausdorff distance = 0.000000 241: Max average Hausdorff distance = 0.000000 241: Percent (0.95) Hausdorff distance = 0.000000 241: Hausdorff distance (boundary) = 0.000000 241: Avg average Hausdorff distance (boundary) = 0.000000 241: Max average Hausdorff distance (boundary) = 0.000000 241: Percent (0.95) Hausdorff distance (boundary) = 0.000000 241: 241: STDERR: 241: Not an error 315: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 315: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-img.mha 315: EXPECTED_ERRNO is 312: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 312: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-img.mha 312: EXPECTED_ERRNO is 247: RETVAL: 0 247: STDOUT: Creating Histogram... 247: Your Histogram will have 256 bins and will be 0.500000 Gy large 247: checking voxel size... 247: 13.1579 13.1579 13.1579 247: 13.1579 13.1579 13.1579 247: Dose and ss-img have the same size. Resample not necessary. 247: 247: STDERR: 247: Not an error 238: RETVAL: 0 238: STDOUT: CENTER_OF_MASS 238: ref 0 0 7.5 238: cmp 0 0 5 238: TP: 22120 238: TN: 6300 238: FN: 1580 238: FP: 0 238: DICE: 0.965517 238: SE: 0.933333 238: SP: 1.000000 238: Hausdorff distance = 4.000000 238: Avg average Hausdorff distance = 0.067568 238: Max average Hausdorff distance = 0.135135 238: Percent (0.95) Hausdorff distance = 0.500000 238: Hausdorff distance (boundary) = 4.000000 238: Avg average Hausdorff distance (boundary) = 0.244043 238: Max average Hausdorff distance (boundary) = 0.334483 238: Percent (0.95) Hausdorff distance (boundary) = 2.500000 238: 238: STDERR: 238: Not an error 231/578 Test #241: plm-dice-f ............................ Passed 0.45 sec 232/578 Test #247: plm-dvh-a ............................. Passed 0.42 sec test 324 Start 324: plm-bsp-mse-k-stats 324: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-k-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 324: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 324: Test timeout computed to be: 1500 test 327 Start 327: plm-bsp-mse-l-stats 327: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-l-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 327: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 327: Test timeout computed to be: 1500 321: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 321: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-img.mha 321: EXPECTED_ERRNO is 266: RETVAL: 0 266: STDOUT: MIN 0.000000 AVE 0.250000 MAX 2.000000 NONZERO 1000 NUMVOX 8000 266: 266: STDERR: 266: Not an error 193: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 193: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1-dicom/;--output-prefix;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix 193: EXPECTED_ERRNO is 260: RETVAL: 0 260: STDOUT: MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872 260: 260: STDERR: 260: Not an error 318: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 318: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-img.mha 318: EXPECTED_ERRNO is 233/578 Test #238: plm-dice-e ............................ Passed 0.51 sec 234/578 Test #266: plm-gamma-b-stats ..................... Passed 0.38 sec test 329 Start 329: plm-bsp-mse-o 329: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-o" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 329: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 329: Test timeout computed to be: 1500 test 331 Start 331: plm-bsp-mse-p 331: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-p" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 331: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 331: Test timeout computed to be: 1500 324: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 324: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-img.mha 324: EXPECTED_ERRNO is 235/578 Test #260: plm-mask-a-stats ...................... Passed 0.42 sec test 333 Start 333: plm-bsp-mse-q 333: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-q" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 333: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 333: Test timeout computed to be: 1500 257: RETVAL: 0 257: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872 257: 257: STDERR: 257: Not an error 329: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 329: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o.txt 329: EXPECTED_ERRNO is 327: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 327: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-img.mha 327: EXPECTED_ERRNO is 236/578 Test #257: plm-fill-a-stats ...................... Passed 0.44 sec test 335 Start 335: plm-bsp-mse-r 335: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-r" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 335: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 335: Test timeout computed to be: 1500 333: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 333: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q.txt 333: EXPECTED_ERRNO is 279: RETVAL: 0 279: STDOUT: Min: 100.000 100.000 100.000 279: Mean: 100.000 100.000 100.000 279: Max: 100.000 100.000 100.000 279: Mean abs: 100.000 100.000 100.000 279: Ave len: 173.205 279: Jacobian: MINJAC 1 MAXJAC 1 279: Energy: MINDIL 0 MAXDIL 0 279: MAXSTRAIN 0 TOTSTRAIN 0 279: Second derivatives: MINSECDER 0 MAXSECDER 0 279: AVESECDER 0 INTSECDER 0 279: Max second derivative at: (1 1 1) 279: 279: STDERR: 279: Not an error 237/578 Test #279: plm-multiply-vf-a-stats ............... Passed 0.38 sec test 338 Start 338: plm-bsp-mi-c-stats 338: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 338: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 338: Test timeout computed to be: 1500 556: RETVAL: 0 556: STDOUT: 556: [PLAN] 556: patient : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha 556: target : 556: dose_out : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha 556: debug : 0 556: dose norm : 70 556: 556: [SETTINGS] 556: flavor: a ** 556: homo_approx: n ** 556: ray_step: 1 ** 556: aperture_out: ** 556: proj_dose_out: ** 556: proj_img_out: ** 556: range_comp_out: ** 556: sigma_out: ** 556: wed_out: ** 556: beam_weight: 1 ** 556: 556: [GEOMETRY & APERTURE] 556: source: 0 -2000 0 ** 556: isocenter: 0 0 0 ** 556: vup: 0 0 1 ** 556: offset: 1500 ** 556: ap_center in pixels: 10 10 ** 556: i_res: 21 21 ** 556: spacing: 1 1 ** 556: source_size: 0 ** 556: ap_file_in: ** 556: rc_file_in: ** 556: smearing: 0 ** 556: 556: [PEAK] 556: E0: P0 556: spread: P0 556: weight: P0 556: 556: Start dose calculation Beam 1 556: Plan_calc::compute_beam_dose(beam) entry -- 556: Setting RVRTS = 1 556: FPD = 347.500001, BPD = 647.528776 556: 21 21 301 556: Setting RVRTS = 1 556: FPD = 347.500001, BPD = 647.528776 556: 21 21 301 556: Priority 4. Prescription depths detected. Any target depth will not be considered. 556: prescription min/max: 70 mm, 90 mm. 556: 556: 16 Mono-energetic BP used: 556: 111 110 109 108 107 106 105 104 103 102 101 100 99 98 97 96 556: Adding peak to sobp (111.000000, 1.000000, 0.892866) [0.010000, 111.000000] 556: Adding peak to sobp (110.000000, 1.000000, 0.199040) [0.010000, 111.000000] 556: Adding peak to sobp (109.000000, 1.000000, 0.226753) [0.010000, 111.000000] 556: Adding peak to sobp (108.000000, 1.000000, 0.173442) [0.010000, 111.000000] 556: Adding peak to sobp (107.000000, 1.000000, 0.151005) [0.010000, 111.000000] 556: Adding peak to sobp (106.000000, 1.000000, 0.133983) [0.010000, 111.000000] 556: Adding peak to sobp (105.000000, 1.000000, 0.120333) [0.010000, 111.000000] 556: Adding peak to sobp (104.000000, 1.000000, 0.111431) [0.010000, 111.000000] 556: Adding peak to sobp (103.000000, 1.000000, 0.102203) [0.010000, 111.000000] 556: Adding peak to sobp (102.000000, 1.000000, 0.095667) [0.010000, 111.000000] 556: Adding peak to sobp (101.000000, 1.000000, 0.089522) [0.010000, 111.000000] 556: Adding peak to sobp (100.000000, 1.000000, 0.084473) [0.010000, 111.000000] 556: Adding peak to sobp (99.000000, 1.000000, 0.079452) [0.010000, 111.000000] 556: Adding peak to sobp (98.000000, 1.000000, 0.078322) [0.010000, 111.000000] 556: Adding peak to sobp (97.000000, 1.000000, 0.063062) [0.010000, 111.000000] 556: Adding peak to sobp (96.000000, 1.000000, 0.099306) [0.010000, 111.000000] 556: **** (1) 556: Raw dose at the maximum (0, -30, 0) : 0.999508 A.U. 556: Dose normalized at the maximum to 1 x 70 Gy. 556: Primary PB num. x, y: 21, 21, primary PB res. x, y: 1 PB/mm, 1 PB/mm 556: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha 556: Sigma: 0.000000 seconds 556: Calc: 1.651481 seconds 556: IO: 0.129832 seconds 556: Reformat: 0.000000 seconds 556: Misc: 0.013208 seconds 556: done. 556: 556: Total execution time : 1.855435 seconds. 556: 556: STDERR: 556: Not an error 335: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 335: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r.txt 335: EXPECTED_ERRNO is 331: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 331: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p.txt 331: EXPECTED_ERRNO is 238/578 Test #556: proton-dose-1 ......................... Passed 2.20 sec test 341 Start 341: plm-bsp-mi-c-2-stats 341: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-c-2-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 341: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 341: Test timeout computed to be: 1500 276: RETVAL: 0 276: STDOUT: MIN -0.000000 AVE 0.000000 MAX -0.000000 NONZERO 0 NUMVOX 54872 276: 276: STDERR: 276: Not an error 239/578 Test #276: plm-multiply-a-stats .................. Passed 0.42 sec test 344 Start 344: plm-bsp-mi-k-stats 344: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mi-k-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 344: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 344: Test timeout computed to be: 1500 209: RETVAL: 0 209: STDOUT: Trying to load ss_list: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-7-list.txt 209: Setting PIH from M_SS_IMG 209: PIH is: 209: Origin = -243.4211 -243.4211 -243.4211 209: Size = 38 38 38 209: Spacing = 13.1579 13.1579 13.1579 209: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 209: Rt_study_warp: Convert ss_img to cxt. 209: Doing extraction 209: Rt_study_warp: Apply dicom_dir. 209: Rt_study_warp: Set geometry from PIH. 209: Rt_study_warp: Set rasterization geometry. 209: rast_dim = 512 512 7 209: rast_offset = -55.2632 -55.2632 -46.0526 209: rast_spacing = 0.215872 0.215872 13.1579 209: Rt_study_warp: warp and save ss. 209: Warp_and_save_ss: save_ss_img 209: save_ss_img: save_prefix_fcsv 209: save_ss_img: save_prefix_fcsv (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv) 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/sphere-7.fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (1).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (2).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (3).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (4).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (5).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (6).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (7).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (8).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (9).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (10).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (11).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (12).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (13).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (14).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (15).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (16).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (17).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (18).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (19).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (20).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (21).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (22).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (23).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (24).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (25).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (26).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (27).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (28).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (29).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (30).fcsv 209: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/Unknown structure (31).fcsv 209: Finished! 209: 209: STDERR: 209: Not an error 286: RETVAL: 0 286: STDOUT: MIN -999.914246 AVE -677.557922 MAX 0.000000 NONZERO 43320 NUMVOX 54872 286: 286: STDERR: 286: Not an error 338: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 338: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-img.mha 338: EXPECTED_ERRNO is 240/578 Test #209: plm-convert-prefix-fcsv ............... Passed 0.73 sec test 347 Start 347: plm-bsp-gm-k-stats 347: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-gm-k-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 347: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 347: Test timeout computed to be: 1500 241/578 Test #286: plm-reg-itk-translation-stats ......... Passed 0.34 sec test 349 Start 349: plm-bsp-sm-multi-a 349: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-sm-multi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 349: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 349: Test timeout computed to be: 1500 263: RETVAL: 0 263: STDOUT: MIN 0.000000 AVE 0.023500 MAX 0.666667 NONZERO 400 NUMVOX 8000 263: 263: STDERR: 263: Not an error 344: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 344: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-img.mha 242/578 Test #263: plm-gamma-a-stats ..................... Passed 0.52 sec test 352 Start 352: plm-bsp-openmp-stats 352: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-openmp-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 352: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 352: Test timeout computed to be: 1500 341: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 341: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-img.mha 341: EXPECTED_ERRNO is 344: EXPECTED_ERRNO is 347: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 347: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-img.mha 347: EXPECTED_ERRNO is 283: RETVAL: 0 283: STDOUT: MIN -0.000061 AVE 0.000001 MAX 0.000061 283: MAE 0.000002 MSE 0.000000 283: DIF 2274 NUM 54872 283: 283: STDERR: 283: Not an error 243/578 Test #283: plm-reg-align-center-stats ............ Passed 0.39 sec test 354 Start 354: plm-bsp-resume 354: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-resume" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 354: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 354: Test timeout computed to be: 1500 349: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 349: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a.txt 349: EXPECTED_ERRNO is 352: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 352: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-img.mha 352: EXPECTED_ERRNO is 109: RETVAL: 0 109: STDOUT: MIN -1000.000000 AVE -999.859619 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600 109: 109: STDERR: 109: Not an error 268: RETVAL: 0 268: STDOUT: Gamma dose max is 70.000000 268: Time = 0.004963 seconds 268: Gamma calculation is under progress... 268: analysis threshold = 7.00 Gy 268: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.mha 268: Pass rate = 90.719998 % 268: 268: STDERR: 268: Not an error 244/578 Test #268: plm-gamma-c ........................... Passed 0.56 sec 245/578 Test #109: fdk-cpu-a-stats ....................... Passed 0.53 sec test 356 Start 356: plm-bsp-logfile 356: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-logfile" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 356: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 356: Test timeout computed to be: 1500 test 359 Start 359: plm-bsp-ushort-stats 359: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-ushort-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 359: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 359: Test timeout computed to be: 1500 303: RETVAL: 0 303: STDOUT: MIN -999.914856 AVE -754.915161 MAX 0.000000 NONZERO 47950 NUMVOX 54872 303: 303: STDERR: 303: Not an error 354: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 354: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume.txt 354: EXPECTED_ERRNO is 246/578 Test #303: plm-reg-itk-demons-stats-2 ............ Passed 0.36 sec test 362 Start 362: plm-bsp-double-stats 362: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-double-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 362: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 362: Test timeout computed to be: 1500 356: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 356: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile.txt 356: EXPECTED_ERRNO is 412: RETVAL: 0 412: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 412: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha 412: Launching registration worker thread 412: Inside registration worker thread 412: Doing registration stage 412: [1] xf_in->m_type = 0, xf_out->m_type = 0 412: RESAMPLE 1 1: (4 4 4), (4 4 4) 412: RESAMPLE 1 1: (4 4 4), (4 4 4) 412: volume_calc_grad complete. 412: bspline_xform_initialize 412: Warning: vox_per_rgn was less than 4. 412: Warning: vox_per_rgn was less than 4. 412: Warning: vox_per_rgn was less than 4. 412: rdims = (3,3,3) 412: vox_per_rgn = (4,4,4) 412: cdims = (6 6 6) 412: Algorithm flavor = g 412: Threading = 0 412: >> Checking JH allocation 412: BSPLINE PARMS 412: max_its = 20 412: max_feval = 20 412: BSPLINE XFORM HEADER 412: vox_per_rgn = 4 4 4 412: roi_offset = 0 0 0 412: roi_dim = 9 9 9 412: img_dc = 1 0 0 0 1 0 0 0 1 412: BST METRICS 412: MET 110100 MSE 1.000000 412: Setting nmax, mmax = 648 27 412: >>> START 412: This problem is unconstrained. 412: [ 0, 0] MSE 1310.066 NV 729 GM 32.312 GN 10.8 [ 0.048 s ] 412: CMIN 0.00 CAVG 0.00 CMAX 0.00 412: LSD 0.00 412: [ 0, 1] MSE 1295.068 NV 729 GM 32.107 GN 10.8 [ 0.068 s ] 412: CMIN -0.80 CAVG -0.00 CMAX 0.03 412: LSD 1.00 412: [ 0, 2] MSE 1236.886 NV 729 GM 31.289 GN 10.5 [ 0.082 s ] 412: CMIN -3.98 CAVG -0.02 CMAX 0.14 412: LSD 5.00 412: [ 0, 3] MSE 1033.121 NV 729 GM 28.011 GN 9.4 [ 0.138 s ] 412: CMIN -16.73 CAVG -0.10 CMAX 0.57 412: LSD 21.00 412: [ 1, 4] MSE 1227.425 NV 729 GM -31.287 GN 10.6 [ 0.074 s ] 412: CMIN -130.39 CAVG -0.75 CMAX 15.78 412: LSD 145.43 412: [ 1, 5] MSE 666.262 NV 729 GM 16.009 GN 5.49 [ 0.084 s ] 412: CMIN -63.32 CAVG -0.36 CMAX 6.81 412: LSD 59.61 412: [ 2, 6] MSE 1232.974 NV 729 GM -31.573 GN 10.6 [ 0.114 s ] 412: CMIN -133.31 CAVG -0.76 CMAX 26.37 412: LSD 96.76 412: [ 2, 7] MSE 663.364 NV 729 GM -16.837 GN 5.81 [ 0.075 s ] 412: CMIN -74.19 CAVG -0.42 CMAX 9.85 412: LSD 15.03 412: [ 3, 8] MSE 654.961 NV 729 GM -10.617 GN 3.9 [ 0.084 s ] 412: CMIN -69.17 CAVG -0.40 CMAX 9.75 412: LSD 6.20 412: [ 4, 9] MSE 648.056 NV 729 GM 16.849 GN 5.74 [ 0.088 s ] 412: CMIN -59.17 CAVG -0.35 CMAX 12.07 412: LSD 13.05 412: [ 4, 10] MSE 648.518 NV 729 GM 6.481 GN 2.37 [ 0.053 s ] 412: CMIN -64.64 CAVG -0.37 CMAX 10.80 412: LSD 5.91 412: [ 5, 11] MSE 642.586 NV 729 GM -2.800 GN 1.61 [ 0.067 s ] 412: CMIN -65.72 CAVG -0.38 CMAX 12.16 412: LSD 3.39 412: [ 6, 12] MSE 621.446 NV 729 GM -3.050 GN 1.62 [ 0.075 s ] 412: CMIN -65.92 CAVG -0.39 CMAX 17.36 412: LSD 11.87 412: [ 6, 13] MSE 550.866 NV 729 GM -6.628 GN 2.45 [ 0.089 s ] 412: CMIN -66.69 CAVG -0.41 CMAX 38.13 412: LSD 59.33 412: [ 7, 14] MSE 512.605 NV 729 GM -3.857 GN 1.62 [ 0.088 s ] 412: CMIN -62.22 CAVG -0.42 CMAX 47.82 412: LSD 24.85 412: [ 7, 15] MSE 447.450 NV 729 GM 1.527 GN 1.38 [ 0.047 s ] 412: CMIN -86.57 CAVG -0.48 CMAX 86.57 412: LSD 124.23 412: [ 7, 16] MSE 464.351 NV 729 GM 2.120 GN 1.3 [ 0.060 s ] 412: CMIN -65.28 CAVG -0.45 CMAX 65.28 412: LSD 69.63 412: [ 8, 17] MSE 472.701 NV 729 GM -6.632 GN 2.42 [ 0.072 s ] 412: CMIN -65.88 CAVG -0.45 CMAX 65.88 412: LSD 10.76 412: [ 8, 18] MSE 465.428 NV 729 GM 2.619 GN 1.34 [ 0.076 s ] 412: CMIN -65.36 CAVG -0.45 CMAX 65.36 412: LSD 1.50 412: [ 8, 19] MSE 464.475 NV 729 GM 2.117 GN 1.3 [ 0.089 s ] 412: CMIN -65.29 CAVG -0.45 CMAX 65.29 412: LSD 0.17 412: [ 8, 20] MSE 464.365 NV 729 GM 2.120 GN 1.3 [ 0.069 s ] 412: CMIN -65.28 CAVG -0.45 CMAX 65.28 412: LSD 0.02 412: [2] xf_out->m_type = 9, xf_in->m_type = 0 412: Doing registration stage 412: [1] xf_in->m_type = 9, xf_out->m_type = 0 412: RESAMPLE 1 1: (1 1 1), (1 1 1) 412: RESAMPLE 1 1: (1 1 1), (1 1 1) 412: volume_calc_grad complete. 412: bspline_xform_initialize 412: Warning: vox_per_rgn was less than 4. 412: Warning: vox_per_rgn was less than 4. 412: Warning: vox_per_rgn was less than 4. 412: rdims = (10,10,10) 412: vox_per_rgn = (4,4,4) 412: cdims = (13 13 13) 412: Algorithm flavor = g 412: Threading = 0 412: >> Checking JH allocation 412: BSPLINE PARMS 412: max_its = 20 412: max_feval = 20 412: BSPLINE XFORM HEADER 412: vox_per_rgn = 4 4 4 412: roi_offset = 0 0 0 412: roi_dim = 38 38 38 412: img_dc = 1 0 0 0 1 0 0 0 1 412: BST METRICS 412: MET 110100 MSE 1.000000 412: Setting nmax, mmax = 6591 83 412: >>> START 412: This problem is unconstrained. 412: [ 0, 0] MSE 2187.416 NV 54548 GM -54.885 GN 20.1 [ 0.051 s ] 412: CMIN -34.32 CAVG -2.98 CMAX 34.99 412: LSD 0.00 412: [ 0, 1] MSE 2164.676 NV 54548 GM -53.547 GN 19.7 [ 0.060 s ] 412: CMIN -34.32 CAVG -2.98 CMAX 34.99 412: LSD 1.00 412: [ 0, 2] MSE 2077.643 NV 54548 GM -48.153 GN 18.1 [ 0.066 s ] 412: CMIN -34.32 CAVG -2.98 CMAX 34.99 412: LSD 5.00 412: [ 1, 3] MSE 1531.465 NV 54548 GM -5.028 GN 6.72 [ 0.066 s ] 412: CMIN -34.32 CAVG -2.97 CMAX 34.99 412: LSD 49.50 412: [ 2, 4] MSE 1454.329 NV 54548 GM 33.264 GN 9.36 [ 0.055 s ] 412: CMIN -34.74 CAVG -2.96 CMAX 34.99 412: LSD 27.82 412: [ 3, 5] MSE 1285.873 NV 54548 GM 41.621 GN 9.3 [ 0.065 s ] 412: CMIN -38.62 CAVG -2.96 CMAX 34.99 412: LSD 33.32 412: [ 4, 6] MSE 601.694 NV 54548 GM -58.120 GN 12.7 [ 0.055 s ] 412: CMIN -66.67 CAVG -3.01 CMAX 47.45 412: LSD 225.15 412: [ 5, 7] MSE 543.836 NV 54548 GM 31.901 GN 9.57 [ 0.051 s ] 412: CMIN -66.22 CAVG -2.99 CMAX 59.99 412: LSD 53.14 412: [ 6, 8] MSE 418.242 NV 54548 GM 12.804 GN 3.31 [ 0.057 s ] 412: CMIN -65.97 CAVG -3.00 CMAX 53.84 412: LSD 23.35 412: [ 7, 9] MSE 404.446 NV 54548 GM -9.046 GN 2.82 [ 0.058 s ] 412: CMIN -67.92 CAVG -3.00 CMAX 54.77 412: LSD 12.26 412: [ 8, 10] MSE 385.397 NV 54548 GM -5.940 GN 2.61 [ 0.056 s ] 412: CMIN -68.58 CAVG -3.00 CMAX 55.54 412: LSD 8.37 412: [ 9, 11] MSE 330.971 NV 54548 GM -28.234 GN 4.05 [ 0.066 s ] 412: CMIN -72.02 CAVG -3.01 CMAX 62.09 412: LSD 44.90 412: [10, 12] MSE 292.026 NV 54548 GM -5.908 GN 2.66 [ 0.089 s ] 412: CMIN -74.57 CAVG -3.00 CMAX 67.66 412: LSD 33.62 412: [11, 13] MSE 251.369 NV 54548 GM 4.024 GN 2.37 [ 0.047 s ] 412: CMIN -84.98 CAVG -2.99 CMAX 73.83 412: LSD 50.34 412: [12, 14] MSE 228.758 NV 54548 GM 11.643 GN 4.01 [ 0.083 s ] 412: CMIN -98.90 CAVG -2.97 CMAX 76.10 412: LSD 60.96 412: [13, 15] MSE 306.308 NV 54548 GM 49.796 GN 7.96 [ 0.082 s ] 412: CMIN -130.24 CAVG -2.94 CMAX 83.22 412: LSD 135.53 412: [13, 16] MSE 226.800 NV 54548 GM 20.941 GN 4.12 [ 0.043 s ] 412: CMIN -103.93 CAVG -2.96 CMAX 76.84 412: LSD 21.75 412: [14, 17] MSE 205.578 NV 54548 GM 24.444 GN 3.6 [ 0.048 s ] 412: CMIN -117.55 CAVG -2.96 CMAX 78.37 412: LSD 53.89 412: [15, 18] MSE 158.105 NV 54548 GM 6.383 GN 1.69 [ 0.067 s ] 412: CMIN -116.51 CAVG -2.96 CMAX 72.95 412: LSD 24.10 412: [16, 19] MSE 139.232 NV 54548 GM -1.923 GN 1.28 [ 0.064 s ] 412: CMIN -119.83 CAVG -2.96 CMAX 72.22 412: LSD 15.80 412: [17, 20] MSE 119.453 NV 54548 GM -6.009 GN 1.45 [ 0.059 s ] 412: CMIN -128.50 CAVG -2.96 CMAX 71.16 412: LSD 33.91 412: [2] xf_out->m_type = 9, xf_in->m_type = 9 412: ** Registration worker thread finished. 412: Warping... 412: Running: plm_warp_native 412: Converting input image... 412: Converting xform... 412: bspline_xform_initialize 412: rdims = (10,10,10) 412: vox_per_rgn = (4,4,4) 412: cdims = (13 13 13) 412: Creating output volume... 412: Running native warper... 412: bspline_warp complete. 412: Back convert to original type... 412: plm_warp_native is complete. 412: Saving image... 412: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-img.nrrd 412: Load: 0.094481 412: Run: 2.97957 412: Save: 0.0658071 412: Total: 3.13986 412: Finished! 412: 412: STDERR: 412: Not an error 359: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 359: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-img.mha 359: EXPECTED_ERRNO is 273: RETVAL: 0 273: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872 273: 273: STDERR: 247/578 Test #412: plm-reg-multi-b ....................... Passed 3.44 sec test 366 Start 366: plm-bsp-char-output-stats 366: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-char-output-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 366: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 366: Test timeout computed to be: 1500 273: Not an error 248/578 Test #273: plm-maximum-a-stats ................... Passed 0.60 sec 299: RETVAL: 0 299: STDOUT: MIN -999.992249 AVE -763.817810 MAX 0.000000 NONZERO 48346 NUMVOX 54872 299: 299: STDERR: test 368 Start 368: plm-bsp-rect 368: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-rect" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 368: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 368: Test timeout computed to be: 1500 299: Not an error 296: RETVAL: 0 296: STDOUT: MIN -1000.000000 AVE -940.684265 MAX 0.000000 NONZERO 52716 NUMVOX 54872 296: 296: STDERR: 296: Not an error 362: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 362: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-img.mha 362: EXPECTED_ERRNO is 253: RETVAL: 0 253: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146089.1771237091.866238RTDOSE 253: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146089.1771237091.866239RTSTRUCT 253: Found DCM_ReferencedFrameOfReferenceSequence! 253: Found DCM_RTReferencedStudySequence! 253: Trying to load rt dose. 253: Load: DoseGridScaling = 0.000000 253: RTDOSE: dim = 38 38 38 253: ipp = -243.421005 -243.421005 -243.421005 253: spc = 13.157900 13.157900 13.157900 253: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 253: Bits_alloc: 32 253: Bits_stored: 32 253: High_bit: 31 253: Pixel_rep: 0 253: rc = 1, length = 109744, npix = 54872 253: Trying to load rt structure set. 253: Adding structure (1), Foreground 253: Structure 1 has color 255\0\0 253: Rasterizing... 253: Converting... 253: Finished rasterization. 253: Time = 0.041800 seconds 253: Creating Histogram... 253: Your Histogram will have 256 bins and will be 0.500000 Gy large 253: checking voxel size... 253: 0.215872 0.215872 13.1579 253: 0.215872 0.215872 13.1579 253: Dose and ss-img have the same size. Resample not necessary. 253: 253: STDERR: 253: Not an error 249/578 Test #299: plm-reg-itk-bspline-stats-1 ........... Passed 0.42 sec test 370 Start 370: plm-bsp-regularize-none-stats 370: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-none-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 370: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 370: Test timeout computed to be: 1500 289: RETVAL: 0 289: STDOUT: MIN -1000.000000 AVE -939.203979 MAX 0.000000 NONZERO 51690 NUMVOX 54872 289: 289: STDERR: 250/578 Test #253: plm-dvh-c ............................. Passed 0.70 sec 251/578 Test #296: plm-reg-itk-similarity-stats-2 ........ Passed 0.43 sec 289: Not an error test 373 Start 373: plm-bsp-regularize-analytic-stats 373: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-analytic-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 373: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 373: Test timeout computed to be: 1500 test 380 Start 380: plm-bsp-landmark-b-stats 380: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 380: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 380: Test timeout computed to be: 1500 321: RETVAL: 0 321: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 321: 321: STDERR: 252/578 Test #289: plm-reg-itk-rigid-a-stats-1 ........... Passed 0.50 sec test 383 Start 383: plm-bsp-landmark-c-stats 383: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 383: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 383: Test timeout computed to be: 1500 321: Not an error 366: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 366: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output.mha 366: EXPECTED_ERRNO is 368: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 368: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect.txt 368: EXPECTED_ERRNO is 327: RETVAL: 0 327: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 327: 327: STDERR: 327: Not an error 315: RETVAL: 0 315: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 315: 315: STDERR: 370: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 370: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-vf.mha 370: EXPECTED_ERRNO is 373: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 373: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-vf.mha 373: EXPECTED_ERRNO is 315: Not an error 253/578 Test #321: plm-bsp-mse-i-stats ................... Passed 0.36 sec 254/578 Test #327: plm-bsp-mse-l-stats ................... Passed 0.33 sec test 386 Start 386: plm-bsp-landmark-d-stats 386: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 386: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 386: Test timeout computed to be: 1500 test 389 Start 389: plm-bsp-landmark-e-stats 389: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 389: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 389: Test timeout computed to be: 1500 383: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 383: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-img.mha 383: EXPECTED_ERRNO is 255/578 Test #315: plm-bsp-mse-g-stats ................... Passed 0.42 sec test 392 Start 392: plm-bsp-dcos-a-stats 392: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 392: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 392: Test timeout computed to be: 1500 380: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 380: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-img.mha 380: EXPECTED_ERRNO is 386: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 386: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-img.mha 386: EXPECTED_ERRNO is 294: RETVAL: 0 294: STDOUT: MIN -1000.000000 AVE -981.187012 MAX 0.000000 NONZERO 54152 NUMVOX 54872 294: 294: STDERR: 294: Not an error 256/578 Test #294: plm-reg-itk-similarity-stats-1 ........ Passed 0.53 sec test 395 Start 395: plm-bsp-dcos-b-stats 395: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 395: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 395: Test timeout computed to be: 1500 389: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 389: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-img.mha 389: EXPECTED_ERRNO is 318: RETVAL: 0 318: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 318: 318: STDERR: 318: Not an error 270: RETVAL: 0 270: STDOUT: Gamma dose max is 70.000000 270: Time = 0.004296 seconds 270: Gamma calculation is under progress... 270: analysis threshold = 7.00 Gy 270: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.mha 270: Pass rate = 89.999998 % 270: 270: STDERR: 257/578 Test #318: plm-bsp-mse-h-stats ................... Passed 0.47 sec test 398 Start 398: plm-bsp-dcos-c-stats 398: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 398: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 398: Test timeout computed to be: 1500 270: Not an error 392: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 392: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-img.nrrd 392: EXPECTED_ERRNO is 395: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 395: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-img.nrrd 395: EXPECTED_ERRNO is 312: RETVAL: 0 312: STDOUT: MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 312: 312: STDERR: 312: Not an error 258/578 Test #270: plm-gamma-d ........................... Passed 0.78 sec test 401 Start 401: plm-bsp-dcos-d-stats 401: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 401: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 401: Test timeout computed to be: 1500 259/578 Test #312: plm-bsp-mse-c-stats ................... Passed 0.53 sec test 404 Start 404: plm-bsp-dcos-e-stats 404: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-e-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 404: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 404: Test timeout computed to be: 1500 344: RETVAL: 0 344: STDOUT: MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872 344: 344: STDERR: 344: Not an error 324: RETVAL: 0 324: STDOUT: MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 324: 324: STDERR: 324: Not an error 260/578 Test #344: plm-bsp-mi-k-stats .................... Passed 0.36 sec test 407 Start 407: plm-bsp-dcos-f-stats 407: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-dcos-f-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 407: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 407: Test timeout computed to be: 1500 261/578 Test #324: plm-bsp-mse-k-stats ................... Passed 0.49 sec test 410 Start 410: plm-reg-multi-a-stats 410: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-vf.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 410: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 410: Test timeout computed to be: 1500 401: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 401: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-img.nrrd 401: EXPECTED_ERRNO is 398: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 398: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-img.nrrd 398: EXPECTED_ERRNO is 291: RETVAL: 0 291: STDOUT: MIN -1000.000000 AVE -939.203979 MAX 0.000000 NONZERO 51690 NUMVOX 54872 291: 291: STDERR: 291: Not an error 407: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 407: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-img.nrrd 407: EXPECTED_ERRNO is 329: RETVAL: 0 329: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 329: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 329: Launching registration worker thread 329: Inside registration worker thread 329: Doing registration stage 329: [1] xf_in->m_type = 0, xf_out->m_type = 0 329: RESAMPLE 1 1: (2 2 2), (2 2 2) 329: RESAMPLE 1 1: (2 2 2), (2 2 2) 329: volume_calc_grad complete. 329: bspline_xform_initialize 329: rdims = (2,2,2) 329: vox_per_rgn = (11,11,11) 329: cdims = (5 5 5) 329: Algorithm flavor = o 329: Threading = 0 329: >> Checking JH allocation 329: BSPLINE PARMS 329: max_its = 5 329: max_feval = 5 329: BSPLINE XFORM HEADER 329: vox_per_rgn = 11 11 11 329: roi_offset = 0 0 0 329: roi_dim = 19 19 19 329: img_dc = 1 0 0 0 1 0 0 0 1 329: BST METRICS 329: MET 110100 MSE 1.000000 329: Setting nmax, mmax = 375 21 329: >>> START 329: This problem is unconstrained. 329: [ 0, 0] MSE 18756.248 NV 6859 GM -2992.626 GN 812 [ 0.011 s ] 329: CMIN 0.00 CAVG 0.00 CMAX 0.00 329: LSD 0.00 329: [ 0, 1] MSE 17839.281 NV 6859 GM -3669.916 GN 971 [ 0.015 s ] 329: CMIN -0.06 CAVG 0.01 CMAX 0.67 329: LSD 1.00 329: [ 0, 2] MSE 14291.201 NV 6844 GM -3069.703 GN 827 [ 0.006 s ] 329: CMIN -0.32 CAVG 0.05 CMAX 3.36 329: LSD 5.00 329: [ 0, 3] MSE 3942.469 NV 6280 GM -1514.267 GN 474 [ 0.012 s ] 329: CMIN -1.35 CAVG 0.21 CMAX 14.12 329: LSD 21.00 329: [ 1, 4] MSE 6518.217 NV 5156 GM 1242.011 GN 628 [ 0.008 s ] 329: CMIN -2.29 CAVG 0.47 CMAX 37.57 329: LSD 35.84 329: [ 1, 5] MSE 347.073 NV 5829 GM -219.984 GN 76.6 [ 0.007 s ] 329: CMIN -1.44 CAVG 0.32 CMAX 24.31 329: LSD 15.58 329: [2] xf_out->m_type = 9, xf_in->m_type = 0 329: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 329: bspline_xform_initialize 329: rdims = (2,2,2) 329: vox_per_rgn = (22,22,22) 329: cdims = (5 5 5) 329: ** Registration worker thread finished. 329: Writing transformation ... 329: Warping... 329: Running: plm_warp_native 329: Converting input image... 329: Converting xform... 329: bspline_xform_initialize 329: rdims = (2,2,2) 329: vox_per_rgn = (22,22,22) 329: cdims = (5 5 5) 329: Creating output vf... 329: Creating output volume... 329: Running native warper... 329: bspline_warp complete. 329: Back convert to original type... 329: > Convert vf to itk 329: > Conversion complete. 329: plm_warp_native is complete. 329: Saving image... 329: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o-img.mha 329: Saving vf... 329: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o-vf.mha 329: Load: 0.0570781 329: Run: 0.070646 329: Save: 0.052403 329: Total: 0.180127 329: Finished! 329: 329: STDERR: 329: Not an error 262/578 Test #291: plm-reg-itk-rigid-a-stats-2 ........... Passed 0.68 sec test 413 Start 413: plm-reg-multi-b-stats 413: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-multi-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 413: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 413: Test timeout computed to be: 1500 263/578 Test #329: plm-bsp-mse-o ......................... Passed 0.50 sec test 416 Start 416: plm-reg-dv-itk-translation-stats 416: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-dv-itk-translation-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 416: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 416: Test timeout computed to be: 1500 404: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 404: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-img.nrrd 404: EXPECTED_ERRNO is 352: RETVAL: 0 352: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 352: 352: STDERR: 352: Not an error 410: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 410: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-vf.nrrd 410: EXPECTED_ERRNO is 264/578 Test #352: plm-bsp-openmp-stats .................. Passed 0.38 sec test 425 Start 425: plm-reg-process-a-stats 425: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-process-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 425: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 425: Test timeout computed to be: 1500 341: RETVAL: 0 341: STDOUT: MIN -991.894104 AVE -128.919357 MAX 0.000000 NONZERO 48385 NUMVOX 54872 341: 341: STDERR: 341: Not an error 333: RETVAL: 0 333: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 333: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 333: Launching registration worker thread 333: Inside registration worker thread 333: Doing registration stage 333: [1] xf_in->m_type = 0, xf_out->m_type = 0 333: RESAMPLE 1 1: (2 2 2), (2 2 2) 333: RESAMPLE 1 1: (2 2 2), (2 2 2) 333: volume_calc_grad complete. 333: bspline_xform_initialize 333: rdims = (2,2,2) 333: vox_per_rgn = (11,11,11) 333: cdims = (5 5 5) 333: Algorithm flavor = q 333: Threading = 0 333: >> Checking JH allocation 333: BSPLINE PARMS 333: max_its = 5 333: max_feval = 5 333: BSPLINE XFORM HEADER 333: vox_per_rgn = 11 11 11 333: roi_offset = 0 0 0 333: roi_dim = 19 19 19 333: img_dc = 1 0 0 0 1 0 0 0 1 333: BST METRICS 333: MET 110100 MSE 1.000000 333: Setting nmax, mmax = 375 21 333: >>> START 333: This problem is unconstrained. 333: [ 0, 0] MSE 18756.236 NV 6859 GM -3516.347 GN 958 [ 0.006 s ] 333: CMIN 0.00 CAVG 0.00 CMAX 0.00 333: LSD 0.00 333: [ 0, 1] MSE 17837.807 NV 6859 GM -3671.469 GN 971 [ 0.050 s ] 333: CMIN -0.05 CAVG 0.01 CMAX 0.68 333: LSD 1.00 333: [ 0, 2] MSE 14356.300 NV 6850 GM -3106.959 GN 834 [ 0.004 s ] 333: CMIN -0.27 CAVG 0.05 CMAX 3.40 333: LSD 5.00 333: [ 1, 3] MSE 822.836 NV 5638 GM 866.827 GN 180 [ 0.021 s ] 333: CMIN -2.31 CAVG 0.43 CMAX 26.12 333: LSD 35.51 333: [ 2, 4] MSE 332.350 NV 5821 GM -189.482 GN 52.6 [ 0.005 s ] 333: CMIN -2.36 CAVG 0.35 CMAX 22.13 333: LSD 6.00 333: [ 3, 5] MSE 268.170 NV 5826 GM -99.417 GN 39.3 [ 0.004 s ] 333: CMIN -2.20 CAVG 0.36 CMAX 21.85 333: LSD 1.43 333: [2] xf_out->m_type = 9, xf_in->m_type = 0 333: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 333: bspline_xform_initialize 333: rdims = (2,2,2) 333: vox_per_rgn = (22,22,22) 333: cdims = (5 5 5) 333: ** Registration worker thread finished. 333: Writing transformation ... 333: Warping... 333: Running: plm_warp_native 333: Converting input image... 333: Converting xform... 333: bspline_xform_initialize 333: rdims = (2,2,2) 333: vox_per_rgn = (22,22,22) 333: cdims = (5 5 5) 333: Creating output vf... 333: Creating output volume... 333: Running native warper... 333: bspline_warp complete. 333: Back convert to original type... 333: > Convert vf to itk 333: > Conversion complete. 333: plm_warp_native is complete. 333: Saving image... 333: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q-img.mha 333: Saving vf... 333: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q-vf.mha 333: Load: 0.0652111 333: Run: 0.123894 333: Save: 0.042908 333: Total: 0.232013 333: Finished! 333: 333: STDERR: 333: Not an error 413: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 413: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-img.nrrd 413: EXPECTED_ERRNO is 265/578 Test #333: plm-bsp-mse-q ......................... Passed 0.53 sec 266/578 Test #341: plm-bsp-mi-c-2-stats .................. Passed 0.47 sec test 428 Start 428: plm-reg-trans-a-stats 428: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 428: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 428: Test timeout computed to be: 1500 test 431 Start 431: plm-reg-trans-b-stats 431: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 431: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 431: Test timeout computed to be: 1500 416: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 416: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-img.nrrd 416: EXPECTED_ERRNO is 347: RETVAL: 0 347: STDOUT: MIN -997.631409 AVE -121.961853 MAX 0.000000 NONZERO 49452 NUMVOX 54872 347: 347: STDERR: 347: Not an error 359: RETVAL: 0 359: STDOUT: MIN 0.000000 AVE 107.313034 MAX 997.000000 NONZERO 44294 NUMVOX 54872 359: 359: STDERR: 359: Not an error 425: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 425: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a.mha 425: EXPECTED_ERRNO is 267/578 Test #347: plm-bsp-gm-k-stats .................... Passed 0.46 sec 268/578 Test #359: plm-bsp-ushort-stats .................. Passed 0.37 sec test 437 Start 437: plm-reg-autores-a-stats 437: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 437: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 437: Test timeout computed to be: 1500 test 440 Start 440: plm-reg-autores-b-stats 440: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-autores-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 440: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 440: Test timeout computed to be: 1500 428: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 428: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a.mha 428: EXPECTED_ERRNO is 437: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 437: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a.mha 437: EXPECTED_ERRNO is 431: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 431: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b.mha 431: EXPECTED_ERRNO is 440: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 440: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b.mha 440: EXPECTED_ERRNO is 366: RETVAL: 0 366: STDOUT: MIN -128.000000 AVE -127.132690 MAX 0.000000 NONZERO 54608 NUMVOX 54872 366: 366: STDERR: 366: Not an error 269/578 Test #366: plm-bsp-char-output-stats ............. Passed 0.45 sec test 446 Start 446: plm-compose-a-stats 446: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 446: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 446: Test timeout computed to be: 1500 362: RETVAL: 0 362: STDOUT: MIN 0.000000 AVE 108.147682 MAX 998.045227 NONZERO 46833 NUMVOX 54872 362: 362: STDERR: 362: Not an error 383: RETVAL: 0 383: STDOUT: MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872 383: 383: STDERR: 383: Not an error 270/578 Test #383: plm-bsp-landmark-c-stats .............. Passed 0.44 sec test 450 Start 450: plm-compose-b-stats 450: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 450: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 450: Test timeout computed to be: 1500 446: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 446: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha 446: EXPECTED_ERRNO is 271/578 Test #362: plm-bsp-double-stats .................. Passed 0.53 sec test 454 Start 454: plm-compose-c-stats 454: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 454: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 454: Test timeout computed to be: 1500 335: RETVAL: 0 335: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 335: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 335: Launching registration worker thread 335: Inside registration worker thread 335: Doing registration stage 335: [1] xf_in->m_type = 0, xf_out->m_type = 0 335: RESAMPLE 1 1: (2 2 2), (2 2 2) 335: RESAMPLE 1 1: (2 2 2), (2 2 2) 335: volume_calc_grad complete. 335: bspline_xform_initialize 335: rdims = (2,2,2) 335: vox_per_rgn = (11,11,11) 335: cdims = (5 5 5) 335: Algorithm flavor = r 335: Threading = 0 335: >> Checking JH allocation 335: BSPLINE PARMS 335: max_its = 5 335: max_feval = 5 335: BSPLINE XFORM HEADER 335: vox_per_rgn = 11 11 11 335: roi_offset = 0 0 0 335: roi_dim = 19 19 19 335: img_dc = 1 0 0 0 1 0 0 0 1 335: BST METRICS 335: MET 110100 MSE 1.000000 335: Setting nmax, mmax = 375 21 335: >>> START 335: This problem is unconstrained. 335: [ 0, 0] MSE 18756.236 NV 6859 GM -3516.347 GN 958 [ 0.046 s ] 335: CMIN 0.00 CAVG 0.00 CMAX 0.00 335: LSD 0.00 335: [ 0, 1] MSE 17837.807 NV 6859 GM -3671.469 GN 971 [ 0.016 s ] 335: CMIN -0.05 CAVG 0.01 CMAX 0.68 335: LSD 1.00 335: [ 0, 2] MSE 14356.300 NV 6850 GM -3106.959 GN 834 [ 0.048 s ] 335: CMIN -0.27 CAVG 0.05 CMAX 3.40 335: LSD 5.00 335: [ 1, 3] MSE 822.836 NV 5638 GM 866.827 GN 180 [ 0.030 s ] 335: CMIN -2.31 CAVG 0.43 CMAX 26.12 335: LSD 35.51 335: [ 2, 4] MSE 332.350 NV 5821 GM -189.482 GN 52.6 [ 0.037 s ] 335: CMIN -2.36 CAVG 0.35 CMAX 22.13 335: LSD 6.00 335: [ 3, 5] MSE 268.170 NV 5826 GM -99.417 GN 39.3 [ 0.077 s ] 335: CMIN -2.20 CAVG 0.36 CMAX 21.85 335: LSD 1.43 335: [2] xf_out->m_type = 9, xf_in->m_type = 0 335: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 335: bspline_xform_initialize 335: rdims = (2,2,2) 335: vox_per_rgn = (22,22,22) 335: cdims = (5 5 5) 335: ** Registration worker thread finished. 335: Writing transformation ... 335: Warping... 335: Running: plm_warp_native 335: Converting input image... 335: Converting xform... 335: bspline_xform_initialize 335: rdims = (2,2,2) 335: vox_per_rgn = (22,22,22) 335: cdims = (5 5 5) 335: Creating output vf... 335: Creating output volume... 335: Running native warper... 335: bspline_warp complete. 335: Back convert to original type... 335: > Convert vf to itk 335: > Conversion complete. 335: plm_warp_native is complete. 335: Saving image... 335: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-img.mha 335: Saving vf... 335: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-vf.mha 335: Load: 0.0730462 335: Run: 0.278941 335: Save: 0.052856 335: Total: 0.404843 335: Finished! 335: 335: STDERR: 335: Not an error 338: RETVAL: 0 338: STDOUT: MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872 338: 338: STDERR: 338: Not an error 272/578 Test #335: plm-bsp-mse-r ......................... Passed 0.73 sec 273/578 Test #338: plm-bsp-mi-c-stats .................... Passed 0.71 sec test 457 Start 457: plm-resample-a-stats 457: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 457: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 457: Test timeout computed to be: 1500 test 460 Start 460: plm-resample-b-stats 460: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 460: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 460: Test timeout computed to be: 1500 307: RETVAL: 0 307: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 307: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 307: Launching registration worker thread 307: Inside registration worker thread 307: Doing registration stage 307: [1] xf_in->m_type = 0, xf_out->m_type = 0 307: Ready to start registration. 307: MSE [ 0] 18945.891 [ 0.077 secs] 307: MSE [ 1] 9788.487 [ 0.092 secs] 307: MSE [ 2] 4038.212 [ 0.115 secs] 307: MSE [ 3] 1283.245 [ 0.111 secs] 307: MSE [ 4] 392.878 [ 0.134 secs] 307: Done with registration. Writing output... 307: Deformation stats (out) 307: VF_MAX = 112.668 VF_AVG = 32.7138 307: [2] xf_out->m_type = 8, xf_in->m_type = 0 307: ** Registration worker thread finished. 307: Warping... 307: plm_warp_itk: xform_to_itk_vf 307: plm_warp_itk: convert_to_itk 307: plm_warp_itk: warping... 307: Saving image... 307: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd-img.mha 307: Saving vf... 307: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd-vf.mha 307: Load: 0.0750601 307: Run: 0.535113 307: Save: 0.0104959 307: Total: 0.620669 307: Finished! 307: 307: STDERR: 307: Not an error 450: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 450: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha 450: EXPECTED_ERRNO is 373: RETVAL: 0 373: STDOUT: Min: -7.802 -7.802 -7.802 373: Mean: -0.007 -0.007 -0.007 373: Max: 7.755 7.755 7.755 373: Mean abs: 0.234 0.234 0.234 373: Ave len: 0.474 373: Jacobian: MINJAC 0.419027 MAXJAC 1.04996 373: Energy: MINDIL -0.755 MAXDIL 0.0517541 373: MAXSTRAIN 0.0532 TOTSTRAIN 83.3434 373: Second derivatives: MINSECDER 2.4e-12 MAXSECDER 0.0192 373: AVESECDER 0.000198 INTSECDER 2.47e+04 373: Max second derivative at: (20 16 20) 373: 373: STDERR: 373: Not an error 274/578 Test #373: plm-bsp-regularize-analytic-stats ..... Passed 0.52 sec 275/578 Test #307: plm-reg-itk-demons-logd ............... Passed 0.93 sec test 463 Start 463: plm-resample-c-stats 463: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-resample-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 463: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 463: Test timeout computed to be: 1500 test 466 Start 466: plm-scale-a-stats 466: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-scale-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 466: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 466: Test timeout computed to be: 1500 454: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 454: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha 454: EXPECTED_ERRNO is 457: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 457: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a.mha 457: EXPECTED_ERRNO is 460: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 460: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b.mha 460: EXPECTED_ERRNO is 354: RETVAL: 0 354: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 354: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 354: Launching registration worker thread 354: Inside registration worker thread 354: Doing registration stage 354: [1] xf_in->m_type = 0, xf_out->m_type = 0 354: RESAMPLE 1 1: (2 2 2), (2 2 2) 354: RESAMPLE 1 1: (2 2 2), (2 2 2) 354: volume_calc_grad complete. 354: bspline_xform_initialize 354: rdims = (2,2,2) 354: vox_per_rgn = (11,11,11) 354: cdims = (5 5 5) 354: Algorithm flavor = c 354: Threading = 0 354: >> Checking JH allocation 354: BSPLINE PARMS 354: max_its = 5 354: max_feval = 5 354: BSPLINE XFORM HEADER 354: vox_per_rgn = 11 11 11 354: roi_offset = 0 0 0 354: roi_dim = 19 19 19 354: img_dc = 1 0 0 0 1 0 0 0 1 354: BST METRICS 354: MET 110100 MSE 1.000000 354: Setting nmax, mmax = 375 21 354: >>> START 354: This problem is unconstrained. 354: [ 0, 0] MSE 18756.248 NV 6859 GM -2980.062 GN 852 [ 0.008 s ] 354: CMIN 0.00 CAVG 0.00 CMAX 0.00 354: LSD 0.00 354: [ 0, 1] MSE 17838.643 NV 6859 GM -2882.390 GN 824 [ 0.013 s ] 354: CMIN -0.07 CAVG 0.01 CMAX 0.68 354: LSD 1.00 354: [ 0, 2] MSE 14464.868 NV 6858 GM -2822.145 GN 824 [ 0.004 s ] 354: CMIN -0.35 CAVG 0.05 CMAX 3.40 354: LSD 5.00 354: [ 0, 3] MSE 3829.069 NV 6286 GM -1585.570 GN 459 [ 0.011 s ] 354: CMIN -1.48 CAVG 0.20 CMAX 14.26 354: LSD 21.00 354: [ 1, 4] MSE 3098.610 NV 5455 GM 1176.112 GN 399 [ 0.012 s ] 354: CMIN -1.74 CAVG 0.44 CMAX 32.50 354: LSD 27.95 354: [ 2, 5] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.004 s ] 354: CMIN -1.73 CAVG 0.34 CMAX 23.99 354: LSD 13.11 354: [2] xf_out->m_type = 9, xf_in->m_type = 0 354: Doing registration stage 354: [1] xf_in->m_type = 9, xf_out->m_type = 0 354: RESAMPLE 1 1: (2 2 2), (2 2 2) 354: RESAMPLE 1 1: (2 2 2), (2 2 2) 354: volume_calc_grad complete. 354: bspline_xform_initialize 354: rdims = (2,2,2) 354: vox_per_rgn = (11,11,11) 354: cdims = (5 5 5) 354: Algorithm flavor = c 354: Threading = 0 354: >> Checking JH allocation 354: BSPLINE PARMS 354: max_its = 5 354: max_feval = 5 354: BSPLINE XFORM HEADER 354: vox_per_rgn = 11 11 11 354: roi_offset = 0 0 0 354: roi_dim = 19 19 19 354: img_dc = 1 0 0 0 1 0 0 0 1 354: BST METRICS 354: MET 110100 MSE 1.000000 354: Setting nmax, mmax = 375 21 354: >>> START 354: This problem is unconstrained. 354: [ 0, 0] MSE 282.038 NV 5851 GM 54.493 GN 43.4 [ 0.008 s ] 354: CMIN -1.73 CAVG 0.34 CMAX 23.99 354: LSD 0.00 354: [ 0, 1] MSE 245.572 NV 5873 GM -24.090 GN 31.6 [ 0.004 s ] 354: CMIN -1.74 CAVG 0.33 CMAX 23.36 354: LSD 1.00 354: [ 1, 2] MSE 184.553 NV 5937 GM -53.657 GN 19.1 [ 0.011 s ] 354: CMIN -1.91 CAVG 0.35 CMAX 21.57 354: LSD 3.72 354: [ 2, 3] MSE 169.679 NV 5953 GM -95.518 GN 19.6 [ 0.004 s ] 354: CMIN -2.31 CAVG 0.35 CMAX 20.63 354: LSD 2.11 354: [ 3, 4] MSE 160.980 NV 5975 GM -14.478 GN 20.7 [ 0.011 s ] 354: CMIN -3.42 CAVG 0.39 CMAX 17.80 354: LSD 5.62 354: [ 4, 5] MSE 133.675 NV 5940 GM -9.965 GN 18.9 [ 0.009 s ] 354: CMIN -3.93 CAVG 0.41 CMAX 17.38 354: LSD 2.38 354: [2] xf_out->m_type = 9, xf_in->m_type = 9 354: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 354: bspline_xform_initialize 354: rdims = (2,2,2) 354: vox_per_rgn = (22,22,22) 354: cdims = (5 5 5) 354: ** Registration worker thread finished. 354: Writing transformation ... 354: Warping... 354: Running: plm_warp_native 354: Converting input image... 354: Converting xform... 354: bspline_xform_initialize 354: rdims = (2,2,2) 354: vox_per_rgn = (22,22,22) 354: cdims = (5 5 5) 354: Creating output vf... 354: Creating output volume... 354: Running native warper... 354: bspline_warp complete. 354: Back convert to original type... 354: > Convert vf to itk 354: > Conversion complete. 354: plm_warp_native is complete. 354: Saving image... 354: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume-img.mha 354: Saving vf... 354: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume-vf.mha 354: Load: 0.0801589 354: Run: 0.156576 354: Save: 0.0539598 354: Total: 0.290695 354: Finished! 354: 354: STDERR: 354: Not an error 395: RETVAL: 0 395: STDOUT: MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872 395: 395: STDERR: 398: RETVAL: 0 398: STDOUT: MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872 398: 398: STDERR: 395: Not an error 398: Not an error 276/578 Test #354: plm-bsp-resume ........................ Passed 0.65 sec test 469 Start 469: plm-scale-vf-a-stats 469: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-scale-vf-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 469: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 469: Test timeout computed to be: 1500 386: RETVAL: 0 386: STDOUT: MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872 386: 386: STDERR: 386: Not an error 305: RETVAL: 0 305: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 305: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 305: Launching registration worker thread 305: Inside registration worker thread 305: Doing registration stage 305: [1] xf_in->m_type = 0, xf_out->m_type = 0 305: Ready to start registration. 305: MSE [ 0] 18945.891 [ 0.108 secs] 305: MSE [ 1] 9795.787 [ 0.087 secs] 305: MSE [ 2] 3911.273 [ 0.108 secs] 305: MSE [ 3] 1186.045 [ 0.117 secs] 305: MSE [ 4] 314.763 [ 0.103 secs] 305: Done with registration. Writing output... 305: Deformation stats (out) 305: VF_MAX = 102.433 VF_AVG = 31.2783 305: [2] xf_out->m_type = 8, xf_in->m_type = 0 305: ** Registration worker thread finished. 305: Warping... 305: plm_warp_itk: xform_to_itk_vf 305: plm_warp_itk: convert_to_itk 305: plm_warp_itk: warping... 305: Saving image... 305: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff-img.mha 305: Saving vf... 305: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff-vf.mha 305: Load: 0.111009 305: Run: 0.531753 305: Save: 0.0146079 305: Total: 0.65737 305: Finished! 305: 305: STDERR: 305: Not an error 277/578 Test #305: plm-reg-itk-demons-diff ............... Passed 0.97 sec 278/578 Test #395: plm-bsp-dcos-b-stats .................. Passed 0.47 sec 279/578 Test #398: plm-bsp-dcos-c-stats .................. Passed 0.43 sec test 475 Start 475: plm-thumbnail-a-stats 475: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 475: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 475: Test timeout computed to be: 1500 test 478 Start 478: plm-thumbnail-b-stats 478: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 478: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 478: Test timeout computed to be: 1500 test 481 Start 481: plm-thumbnail-c-stats 481: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-thumbnail-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 481: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 481: Test timeout computed to be: 1500 370: RETVAL: 0 370: STDOUT: Min: -9.485 -9.485 -9.485 370: Mean: -0.004 -0.004 -0.004 370: Max: 9.819 9.819 9.819 370: Mean abs: 0.215 0.215 0.215 370: Ave len: 0.425 370: Jacobian: MINJAC 0.315393 MAXJAC 1.06557 370: Energy: MINDIL -0.958 MAXDIL 0.0701264 370: MAXSTRAIN 0.0879 TOTSTRAIN 112.949 370: Second derivatives: MINSECDER 0 MAXSECDER 0.0362 370: AVESECDER 0.000354 INTSECDER 4.42e+04 370: Max second derivative at: (20 20 16) 370: 370: STDERR: 370: Not an error 463: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 463: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-vf.mha 463: EXPECTED_ERRNO is 466: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 466: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a.nrrd 466: EXPECTED_ERRNO is 280/578 Test #370: plm-bsp-regularize-none-stats ......... Passed 0.59 sec 281/578 Test #386: plm-bsp-landmark-d-stats .............. Passed 0.54 sec test 484 Start 484: plm-intersect-stats 484: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-intersect-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 484: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 484: Test timeout computed to be: 1500 test 487 Start 487: plm-union-stats 487: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-union-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 487: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 487: Test timeout computed to be: 1500 193: RETVAL: 0 193: STDOUT: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146132.1771237094.911302RTDOSE 193: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146132.1771237094.911303RTSTRUCT 193: Found DCM_ReferencedFrameOfReferenceSequence! 193: Found DCM_RTReferencedStudySequence! 193: Trying to load rt dose. 193: Load: DoseGridScaling = 0.000000 193: RTDOSE: dim = 100 100 100 193: ipp = -247.500000 -247.500000 -247.500000 193: spc = 5.000000 5.000000 5.000000 193: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 193: Bits_alloc: 32 193: Bits_stored: 32 193: High_bit: 31 193: Pixel_rep: 0 193: rc = 1, length = 2000000, npix = 1000000 193: Trying to load rt structure set. 193: Adding structure (1), Body 193: Adding structure (2), Tumor 193: Adding structure (3), Lung 193: Structure 1 has color 255\0\0 193: Structure 2 has color 255\255\0 193: Structure 3 has color 255\0\255 193: Setting PIH from RDD 193: PIH is: 193: Origin = -247.5000 -247.5000 -247.5000 193: Size = 100 100 100 193: Spacing = 5.0000 5.0000 5.0000 193: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 193: Rt_study_warp: Convert ss_img to cxt. 193: Rt_study_warp: Apply dicom_dir. 193: Rt_study_warp: Set geometry from PIH. 193: Rt_study_warp: Set rasterization geometry. 193: rast_dim = 512 512 99 193: rast_offset = -157.5 -157.5 -247.5 193: rast_spacing = 0.615234 0.615234 5 193: Rt_study_warp: warp and save ss. 193: Warp_and_save_ss: seg->rasterize 193: Rasterizing... 193: Converting... 193: Finished rasterization. 193: Warp_and_save_ss: save_ss_img 193: save_ss_img: save_prefix 193: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Body.mha 193: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Tumor.mha 193: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Lung.mha 193: Finished! 193: 193: STDERR: 193: Not an error 469: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 469: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a.nrrd 469: EXPECTED_ERRNO is 282/578 Test #193: plm-convert-dicom-c ................... Passed 0.93 sec test 194 Start 194: plm-convert-dicom-c-stats 194: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Tumor.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 194: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 194: Test timeout computed to be: 1500 478: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 478: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b.png 478: EXPECTED_ERRNO is 331: RETVAL: 0 331: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 331: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 331: Launching registration worker thread 331: Inside registration worker thread 331: Doing registration stage 331: [1] xf_in->m_type = 0, xf_out->m_type = 0 331: RESAMPLE 1 1: (2 2 2), (2 2 2) 331: RESAMPLE 1 1: (2 2 2), (2 2 2) 331: volume_calc_grad complete. 331: bspline_xform_initialize 331: rdims = (2,2,2) 331: vox_per_rgn = (11,11,11) 331: cdims = (5 5 5) 331: Algorithm flavor = p 331: Threading = 0 331: >> Checking JH allocation 331: BSPLINE PARMS 331: max_its = 5 331: max_feval = 5 331: BSPLINE XFORM HEADER 331: vox_per_rgn = 11 11 11 331: roi_offset = 0 0 0 331: roi_dim = 19 19 19 331: img_dc = 1 0 0 0 1 0 0 0 1 331: BST METRICS 331: MET 110100 MSE 1.000000 331: Setting nmax, mmax = 375 21 331: >>> START 331: This problem is unconstrained. 331: [ 0, 0] MSE 18756.236 NV 6859 GM -3516.347 GN 958 [ 0.029 s ] 331: CMIN 0.00 CAVG 0.00 CMAX 0.00 331: LSD 0.00 331: [ 0, 1] MSE 17837.807 NV 6859 GM -3671.469 GN 971 [ 0.029 s ] 331: CMIN -0.05 CAVG 0.01 CMAX 0.68 331: LSD 1.00 331: [ 0, 2] MSE 14356.300 NV 6850 GM -3106.959 GN 834 [ 0.027 s ] 331: CMIN -0.27 CAVG 0.05 CMAX 3.40 331: LSD 5.00 331: [ 1, 3] MSE 822.836 NV 5638 GM 866.827 GN 180 [ 0.032 s ] 331: CMIN -2.31 CAVG 0.43 CMAX 26.12 331: LSD 35.51 331: [ 2, 4] MSE 332.350 NV 5821 GM -189.482 GN 52.6 [ 0.044 s ] 331: CMIN -2.36 CAVG 0.35 CMAX 22.13 331: LSD 6.00 331: [ 3, 5] MSE 268.170 NV 5826 GM -99.417 GN 39.3 [ 0.026 s ] 331: CMIN -2.20 CAVG 0.36 CMAX 21.85 331: LSD 1.43 331: [2] xf_out->m_type = 9, xf_in->m_type = 0 331: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 331: bspline_xform_initialize 331: rdims = (2,2,2) 331: vox_per_rgn = (22,22,22) 331: cdims = (5 5 5) 331: Writing transformation ... 331: ** Registration worker thread finished. 331: Warping... 331: Running: plm_warp_native 331: Converting input image... 331: Converting xform... 331: bspline_xform_initialize 331: rdims = (2,2,2) 331: vox_per_rgn = (22,22,22) 331: cdims = (5 5 5) 331: Creating output vf... 331: Creating output volume... 331: Running native warper... 331: bspline_warp complete. 331: Back convert to original type... 331: > Convert vf to itk 331: > Conversion complete. 331: plm_warp_native is complete. 331: Saving image... 331: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-img.mha 331: Saving vf... 331: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-vf.mha 331: Load: 0.131751 331: Run: 0.213462 331: Save: 0.0514169 331: Total: 0.39663 331: Finished! 331: 331: STDERR: 331: Not an error 475: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 475: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a.png 475: EXPECTED_ERRNO is 481: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 481: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c.png 481: EXPECTED_ERRNO is 283/578 Test #331: plm-bsp-mse-p ......................... Passed 0.88 sec test 490 Start 490: plm-threshold-a-stats 490: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 490: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 490: Test timeout computed to be: 1500 484: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 484: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect.mha 484: EXPECTED_ERRNO is 487: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 487: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union.mha 487: EXPECTED_ERRNO is 380: RETVAL: 0 380: STDOUT: MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872 380: 380: STDERR: 380: Not an error 284/578 Test #380: plm-bsp-landmark-b-stats .............. Passed 0.64 sec test 493 Start 493: plm-threshold-b-stats 493: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-b-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 493: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 493: Test timeout computed to be: 1500 194: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 194: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-prefix/Tumor.mha 194: EXPECTED_ERRNO is 404: RETVAL: 0 404: STDOUT: MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872 404: 404: STDERR: 404: Not an error 356: RETVAL: 0 356: STDOUT: Plastimatch 1.9.4 356: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 356: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 356: Launching registration worker thread 356: Inside registration worker thread 356: Doing registration stage 356: [1] xf_in->m_type = 0, xf_out->m_type = 0 356: RESAMPLE 1 1: (2 2 2), (2 2 2) 356: RESAMPLE 1 1: (2 2 2), (2 2 2) 356: volume_calc_grad complete. 356: bspline_xform_initialize 356: rdims = (2,2,2) 356: vox_per_rgn = (11,11,11) 356: cdims = (5 5 5) 356: Algorithm flavor = g 356: Threading = 0 356: >> Checking JH allocation 356: BSPLINE PARMS 356: max_its = 5 356: max_feval = 5 356: BSPLINE XFORM HEADER 356: vox_per_rgn = 11 11 11 356: roi_offset = 0 0 0 356: roi_dim = 19 19 19 356: img_dc = 1 0 0 0 1 0 0 0 1 356: BST METRICS 356: MET 110100 MSE 1.000000 356: Setting nmax, mmax = 375 21 356: >>> START 356: This problem is unconstrained. 356: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.044 s ] 356: CMIN 0.00 CAVG 0.00 CMAX 0.00 356: LSD 0.00 356: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.045 s ] 356: CMIN -0.07 CAVG 0.01 CMAX 0.68 356: LSD 1.00 356: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.052 s ] 356: CMIN -0.35 CAVG 0.05 CMAX 3.40 356: LSD 5.00 356: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.031 s ] 356: CMIN -1.48 CAVG 0.20 CMAX 14.26 356: LSD 21.00 356: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.037 s ] 356: CMIN -1.74 CAVG 0.44 CMAX 32.50 356: LSD 27.95 356: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.026 s ] 356: CMIN -1.73 CAVG 0.34 CMAX 23.99 356: LSD 13.11 356: [2] xf_out->m_type = 9, xf_in->m_type = 0 356: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 356: bspline_xform_initialize 356: rdims = (2,2,2) 356: vox_per_rgn = (22,22,22) 356: cdims = (5 5 5) 356: ** Registration worker thread finished. 356: Writing transformation ... 356: Warping... 356: Running: plm_warp_native 356: Converting input image... 356: Converting xform... 356: bspline_xform_initialize 356: rdims = (2,2,2) 356: vox_per_rgn = (22,22,22) 356: cdims = (5 5 5) 356: Creating output vf... 356: Creating output volume... 356: Running native warper... 356: bspline_warp complete. 356: Back convert to original type... 356: > Convert vf to itk 356: > Conversion complete. 356: plm_warp_native is complete. 356: Saving image... 356: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile-img.nrrd 356: Saving vf... 356: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile-vf.nrrd 356: Plastimatch 1.9.4 356: Load: 0.063647 356: Run: 0.251556 356: Save: 0.140571 356: Total: 0.455774 356: Finished! 356: 356: STDERR: 356: Not an error 413: RETVAL: 0 413: STDOUT: MIN -1000.000183 AVE -985.762146 MAX 0.000000 NONZERO 54224 NUMVOX 54872 413: 413: STDERR: 413: Not an error 285/578 Test #404: plm-bsp-dcos-e-stats .................. Passed 0.51 sec 425: RETVAL: 0 425: STDOUT: MIN -500.000000 AVE -490.647552 MAX 0.000000 NONZERO 54871 NUMVOX 54872 425: 425: STDERR: test 496 Start 496: plm-threshold-c-stats 496: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-threshold-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 496: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 496: Test timeout computed to be: 1500 425: Not an error 392: RETVAL: 0 392: STDOUT: MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872 392: 392: STDERR: 286/578 Test #356: plm-bsp-logfile ....................... Passed 0.75 sec 287/578 Test #413: plm-reg-multi-b-stats ................. Passed 0.46 sec 288/578 Test #425: plm-reg-process-a-stats ............... Passed 0.43 sec 392: Not an error 289/578 Test #392: plm-bsp-dcos-a-stats .................. Passed 0.62 sec test 502 Start 502: plm-warp-a-stats 502: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 502: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 502: Test timeout computed to be: 1500 test 505 Start 505: plm-warp-b-stats-1 505: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-b-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 505: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 505: Test timeout computed to be: 1500 test 507 Start 507: plm-warp-b-stats-2 507: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-b-stats-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 507: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 507: Test timeout computed to be: 1500 410: RETVAL: 0 410: STDOUT: Min: -20.189 -0.190 -0.190 410: Mean: -20.000 -0.000 -0.000 410: Max: -19.810 0.190 0.190 410: Mean abs: 20.000 0.000 0.000 410: Ave len: 20.000 410: Jacobian: MINJAC 0.978516 MAXJAC 1.02157 410: Energy: MINDIL -0.0216 MAXDIL 0.0215666 410: MAXSTRAIN 0.0221 TOTSTRAIN 0.0501571 410: Second derivatives: MINSECDER 0 MAXSECDER 0.00749 410: AVESECDER 1.12e-05 INTSECDER 1.4e+03 410: Max second derivative at: (18 20 16) 410: 410: STDERR: 410: Not an error 290/578 Test #410: plm-reg-multi-a-stats ................. Passed 0.53 sec test 510 Start 510: plm-warp-c-stats 510: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-c-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 510: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 510: Test timeout computed to be: 1500 test 513 Start 513: plm-warp-d-stats 513: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 513: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 513: Test timeout computed to be: 1500 493: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 493: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b.mha 493: EXPECTED_ERRNO is 490: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 490: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a.mha 490: EXPECTED_ERRNO is 440: RETVAL: 0 440: STDOUT: MIN -999.769348 AVE -597.450806 MAX 0.000000 NONZERO 38880 NUMVOX 54872 440: 440: STDERR: 440: Not an error 401: RETVAL: 0 401: STDOUT: MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872 401: 401: STDERR: 401: Not an error 349: RETVAL: 0 349: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 349: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 349: Loading fixed image [1]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 349: Loading moving image [1]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 349: Launching registration worker thread 349: Inside registration worker thread 349: Doing registration stage 349: [1] xf_in->m_type = 0, xf_out->m_type = 0 349: RESAMPLE 1 1: (2 2 2), (2 2 2) 349: RESAMPLE 1 1: (2 2 2), (2 2 2) 349: volume_calc_grad_mag complete. 349: volume_calc_grad_mag complete. 349: volume_calc_grad complete. 349: RESAMPLE 1 1: (2 2 2), (2 2 2) 349: RESAMPLE 1 1: (2 2 2), (2 2 2) 349: volume_calc_grad complete. 349: bspline_xform_initialize 349: rdims = (2,2,2) 349: vox_per_rgn = (11,11,11) 349: cdims = (5 5 5) 349: Algorithm flavor = c 349: Threading = 0 349: >> Checking JH allocation 349: >> Performing JH allocation 349: BSPLINE PARMS 349: max_its = 5 349: max_feval = 5 349: BSPLINE XFORM HEADER 349: vox_per_rgn = 11 11 11 349: roi_offset = 0 0 0 349: roi_dim = 19 19 19 349: img_dc = 1 0 0 0 1 0 0 0 1 349: BST METRICS 349: MET 110100 GM 0.100000 349: MET 110100 MI 100.000000 349: >> Performing JH initialization 349: Setting nmax, mmax = 375 21 349: >>> START 349: This problem is unconstrained. 349: [ 0, 0] SCORE -23.086 NV 6859 GM 11.933 GN 2.8 [ 0.050 s ] 349: GM 172.276 MI -0.4031359 CMIN 0.01 CAVG 0.01 CMAX 0.01 349: LSD 0.00 349: [ 0, 1] SCORE -21.366 NV 6859 GM -20.848 GN 4.05 [ 0.035 s ] 349: GM 172.158 MI -0.3858200 CMIN -0.49 CAVG -0.00 CMAX 0.08 349: LSD 1.00 349: [ 0, 2] SCORE -22.915 NV 6859 GM -12.881 GN 2.54 [ 0.023 s ] 349: GM 172.298 MI -0.4014443 CMIN -0.08 CAVG 0.01 CMAX 0.02 349: LSD 0.18 349: [ 0, 3] SCORE -23.222 NV 6859 GM -1.121 GN 1.07 [ 0.013 s ] 349: GM 172.313 MI -0.4045370 CMIN -0.01 CAVG 0.01 CMAX 0.01 349: LSD 0.05 349: [ 1, 4] SCORE -23.229 NV 6859 GM 16.621 GN 3.63 [ 0.035 s ] 349: GM 172.348 MI -0.4046354 CMIN -0.01 CAVG 0.01 CMAX 0.01 349: LSD 0.01 349: [ 2, 5] SCORE -22.889 NV 6859 GM -16.998 GN 4.96 [ 0.024 s ] 349: GM 172.750 MI -0.4016393 CMIN -0.14 CAVG 0.01 CMAX 0.04 349: LSD 0.20 349: [2] xf_out->m_type = 9, xf_in->m_type = 0 349: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 349: bspline_xform_initialize 349: rdims = (2,2,2) 349: vox_per_rgn = (22,22,22) 349: cdims = (5 5 5) 349: ** Registration worker thread finished. 349: Writing transformation ... 349: Warping... 349: Running: plm_warp_native 349: Converting input image... 349: Converting xform... 349: bspline_xform_initialize 349: rdims = (2,2,2) 349: vox_per_rgn = (22,22,22) 349: cdims = (5 5 5) 349: Creating output vf... 349: Creating output volume... 349: Running native warper... 349: bspline_warp complete. 349: Back convert to original type... 349: > Convert vf to itk 349: > Conversion complete. 349: plm_warp_native is complete. 349: Saving image... 349: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a-img.mha 349: Saving vf... 349: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a-vf.mha 349: Load: 0.106603 349: Run: 0.228315 349: Save: 0.0762899 349: Total: 0.411208 349: Finished! 349: 349: STDERR: 349: Not an error 428: RETVAL: 0 428: STDOUT: MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872 428: 428: STDERR: 428: Not an error 437: RETVAL: 0 437: STDOUT: MIN -999.770874 AVE -597.535889 MAX 0.000000 NONZERO 38880 NUMVOX 54872 437: 437: STDERR: 437: Not an error 502: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 502: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-vf.mha 502: EXPECTED_ERRNO is 416: RETVAL: 0 416: STDOUT: MIN -999.914246 AVE -467.031616 MAX 1000.000000 NONZERO 54872 NUMVOX 54872 416: 416: STDERR: 416: Not an error 505: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 505: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-vf.mha 505: EXPECTED_ERRNO is 496: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 496: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c.mha 496: EXPECTED_ERRNO is 507: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 507: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b.mha 507: EXPECTED_ERRNO is 291/578 Test #349: plm-bsp-sm-multi-a .................... Passed 0.92 sec 292/578 Test #401: plm-bsp-dcos-d-stats .................. Passed 0.62 sec 293/578 Test #416: plm-reg-dv-itk-translation-stats ...... Passed 0.53 sec 294/578 Test #428: plm-reg-trans-a-stats ................. Passed 0.49 sec 295/578 Test #437: plm-reg-autores-a-stats ............... Passed 0.46 sec 296/578 Test #440: plm-reg-autores-b-stats ............... Passed 0.46 sec test 516 Start 516: plm-warp-f-stats-1 516: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-f-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=header;plm-warp-f-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 516: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 516: Test timeout computed to be: 1500 test 519 Start 519: plm-warp-g-stats-1 519: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-g-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 519: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 519: Test timeout computed to be: 1500 test 522 Start 522: plm-warp-h-stats-1 522: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-h-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;plm-warp-h-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 522: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 522: Test timeout computed to be: 1500 test 525 Start 525: plm-warp-i-stats-1 525: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-i-stats-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;plm-warp-i-img.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 525: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 525: Test timeout computed to be: 1500 test 528 Start 528: plm-xf-convert-b 528: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-b.txt;--output-type;bspline;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125;--grid-spacing;10 10 10" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 528: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 528: Test timeout computed to be: 1500 test 532 Start 532: plm-xf-convert-d-warp-1-stats 532: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 532: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 532: Test timeout computed to be: 1500 407: RETVAL: 0 407: STDOUT: MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872 407: 407: STDERR: 407: Not an error 389: RETVAL: 0 389: STDOUT: MIN -1000.000183 AVE -991.396057 MAX 0.000000 NONZERO 54488 NUMVOX 54872 389: 389: STDERR: 389: Not an error 22: RETVAL: 0 22: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha 22: Doing extraction 22: Keyholizing structure 0. 22: Keyholizing structure 1. 22: Keyholizing structure 2. 22: Write: DoseGridScaling = 0.000000 22: 22: STDERR: 22: Not an error 510: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 510: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c.mha 510: EXPECTED_ERRNO is 513: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 513: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d.mha 513: EXPECTED_ERRNO is 516: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 516: PARMS is header;plm-warp-f-img.nrrd 516: EXPECTED_ERRNO is 519: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 519: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-img.nrrd 519: EXPECTED_ERRNO is 522: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 522: PARMS is stats;plm-warp-h-img.nrrd 522: EXPECTED_ERRNO is 297/578 Test #22: lung-2 ................................ Passed 5.08 sec 298/578 Test #389: plm-bsp-landmark-e-stats .............. Passed 0.77 sec 299/578 Test #407: plm-bsp-dcos-f-stats .................. Passed 0.65 sec test 471 Start 471: plm-sift-a 471: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-sift-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=sift;--output-ps-1;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-1.fcsv;--output-ps-2;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-2.fcsv;--output-match-1;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-1.fcsv;--output-match-2;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-2.fcsv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 471: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 471: Test timeout computed to be: 1500 test 535 Start 535: plm-xf-convert-d-warp-2-stats 535: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-d-warp-2-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 535: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 535: Test timeout computed to be: 1500 test 541 Start 541: plm-xf-convert-h-stats 541: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-h-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 541: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 541: Test timeout computed to be: 1500 368: RETVAL: 0 368: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 368: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 368: Launching registration worker thread 368: Inside registration worker thread 368: Doing registration stage 368: [1] xf_in->m_type = 0, xf_out->m_type = 0 368: RESAMPLE 1 1: (2 2 2), (2 2 2) 368: RESAMPLE 1 1: (2 2 2), (2 2 2) 368: volume_calc_grad complete. 368: bspline_xform_initialize 368: Warning: vox_per_rgn was less than 4. 368: Warning: vox_per_rgn was less than 4. 368: Warning: vox_per_rgn was less than 4. 368: rdims = (5,5,5) 368: vox_per_rgn = (4,4,4) 368: cdims = (8 8 8) 368: Algorithm flavor = g 368: Threading = 0 368: >> Checking JH allocation 368: BSPLINE PARMS 368: max_its = 5 368: max_feval = 5 368: BSPLINE XFORM HEADER 368: vox_per_rgn = 4 4 4 368: roi_offset = 0 0 0 368: roi_dim = 19 19 19 368: img_dc = 1 0 0 0 1 0 0 0 1 368: BST METRICS 368: MET 110100 MSE 1.000000 368: Setting nmax, mmax = 1536 41 368: >>> START 368: This problem is unconstrained. 368: [ 0, 0] MSE 1339.481 NV 6859 GM 84.834 GN 23.1 [ 0.075 s ] 368: CMIN 0.00 CAVG 0.00 CMAX 0.00 368: LSD 0.00 368: [ 0, 1] MSE 1311.345 NV 6859 GM 83.820 GN 22.8 [ 0.031 s ] 368: CMIN -0.60 CAVG -0.00 CMAX 0.08 368: LSD 1.00 368: [ 0, 2] MSE 1202.580 NV 6859 GM 79.773 GN 21.8 [ 0.051 s ] 368: CMIN -2.99 CAVG -0.01 CMAX 0.42 368: LSD 5.00 368: [ 0, 3] MSE 827.300 NV 6859 GM 63.686 GN 17.5 [ 0.030 s ] 368: CMIN -12.56 CAVG -0.05 CMAX 1.74 368: LSD 21.00 368: [ 1, 4] MSE 213.043 NV 6859 GM -16.873 GN 5.84 [ 0.046 s ] 368: CMIN -54.37 CAVG -0.20 CMAX 6.52 368: LSD 67.10 368: [ 2, 5] MSE 175.936 NV 6859 GM -0.450 GN 2.34 [ 0.025 s ] 368: CMIN -51.91 CAVG -0.18 CMAX 5.91 368: LSD 13.48 368: [2] xf_out->m_type = 9, xf_in->m_type = 0 368: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 368: bspline_xform_initialize 368: rdims = (5,5,5) 368: vox_per_rgn = (8,8,8) 368: cdims = (8 8 8) 368: ** Registration worker thread finished. 368: Writing transformation ... 368: Warping... 368: Running: plm_warp_native 368: Converting input image... 368: Converting xform... 368: bspline_xform_initialize 368: rdims = (5,5,5) 368: vox_per_rgn = (8,8,8) 368: cdims = (8 8 8) 368: Creating output vf... 368: Creating output volume... 368: Running native warper... 368: bspline_warp complete. 368: Back convert to original type... 368: > Convert vf to itk 368: > Conversion complete. 368: plm_warp_native is complete. 368: Saving image... 368: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-img.mha 368: Saving vf... 368: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-vf.nrrd 368: Load: 0.136385 368: Run: 0.275731 368: Save: 0.181088 368: Total: 0.593204 368: Finished! 368: 368: STDERR: 368: Not an error 446: RETVAL: 0 446: STDOUT: Min: 0.000 -1.573 -1.573 446: Mean: 13.794 -0.035 -0.034 446: Max: 20.615 1.329 1.329 446: Mean abs: 13.794 0.281 0.281 446: Ave len: 13.805 446: Jacobian: MINJAC -6.27693 MAXJAC 1.08247 446: Energy: MINDIL -6.41 MAXDIL 0.0798482 446: MAXSTRAIN 14.2 TOTSTRAIN 28436.8 446: Second derivatives: MINSECDER 0 MAXSECDER 165 446: AVESECDER 6.5 INTSECDER 8.13e+05 446: Max second derivative at: (30 18 18) 446: 446: STDERR: 446: Not an error 528: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 528: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-a-vf.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-b.txt;--output-type;bspline;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125;--grid-spacing;10 10 10 528: EXPECTED_ERRNO is 532: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 532: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1.nrrd 532: EXPECTED_ERRNO is 525: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 525: PARMS is stats;plm-warp-i-img.nrrd 525: EXPECTED_ERRNO is 309: RETVAL: 0 309: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 309: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 309: Launching registration worker thread 309: Inside registration worker thread 309: Doing registration stage 309: [1] xf_in->m_type = 0, xf_out->m_type = 0 309: Ready to start registration. 309: MSE [ 0] 18945.891 [ 0.076 secs] 309: MSE [ 1] 9778.825 [ 0.147 secs] 309: MSE [ 2] 3980.165 [ 0.185 secs] 309: MSE [ 3] 1233.515 [ 0.229 secs] 309: MSE [ 4] 374.936 [ 0.219 secs] 309: Done with registration. Writing output... 309: Deformation stats (out) 309: VF_MAX = 109.365 VF_AVG = 31.9237 309: [2] xf_out->m_type = 8, xf_in->m_type = 0 309: ** Registration worker thread finished. 309: Warping... 309: plm_warp_itk: xform_to_itk_vf 309: plm_warp_itk: convert_to_itk 309: plm_warp_itk: warping... 309: Saving image... 309: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd-img.mha 309: Saving vf... 309: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd-vf.mha 309: Load: 0.0779111 309: Run: 0.860561 309: Save: 0.017298 309: Total: 0.95577 309: Finished! 309: 309: STDERR: 309: Not an error 300/578 Test #446: plm-compose-a-stats ................... Passed 0.44 sec 301/578 Test #368: plm-bsp-rect .......................... Passed 0.88 sec 302/578 Test #309: plm-reg-itk-demons-sym-logd ........... Passed 1.26 sec 450: RETVAL: 0 450: STDOUT: Min: 0.000 -1.573 -1.573 450: Mean: 13.794 -0.035 -0.034 450: Max: 20.615 1.329 1.329 450: Mean abs: 13.794 0.281 0.281 450: Ave len: 13.805 450: Jacobian: MINJAC -6.27693 MAXJAC 1.08247 450: Energy: MINDIL -6.41 MAXDIL 0.0798482 450: MAXSTRAIN 14.2 TOTSTRAIN 28436.8 450: Second derivatives: MINSECDER 0 MAXSECDER 165 450: AVESECDER 6.5 INTSECDER 8.13e+05 450: Max second derivative at: (30 18 18) 450: 450: STDERR: 450: Not an error 303/578 Test #450: plm-compose-b-stats ................... Passed 0.42 sec test 544 Start 544: plm-xf-convert-i-stats 544: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-i-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 544: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 544: Test timeout computed to be: 1500 test 547 Start 547: xf-invert-vf-zero-1-stats 547: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vf-zero-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 547: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 547: Test timeout computed to be: 1500 test 550 Start 550: xf-invert-vf-trans-1-stats 550: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vf-trans-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 550: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 550: Test timeout computed to be: 1500 test 552 Start 552: xf-invert-vrs-a 552: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vrs-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-a.tfm" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 552: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 552: Test timeout computed to be: 1500 460: RETVAL: 0 460: STDOUT: MIN -999.915161 AVE -878.621277 MAX -0.000005 NONZERO 64000 NUMVOX 64000 460: 460: STDERR: 460: Not an error 535: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 535: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2.nrrd 535: EXPECTED_ERRNO is 431: RETVAL: 0 431: STDOUT: MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872 431: 431: STDERR: 431: Not an error 304/578 Test #460: plm-resample-b-stats .................. Passed 0.41 sec 471: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 471: PARMS is sift;--output-ps-1;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-1.fcsv;--output-ps-2;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-ps-2.fcsv;--output-match-1;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-1.fcsv;--output-match-2;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-2.fcsv;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-1.mha;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/lung-2.mha 471: EXPECTED_ERRNO is 541: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 541: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h.nrrd 541: EXPECTED_ERRNO is test 554 Start 554: xf-invert-vrs-b 554: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xf-invert-vrs-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-invert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-b.tfm;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-b.tfm" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 554: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 554: Test timeout computed to be: 1500 305/578 Test #431: plm-reg-trans-b-stats ................. Passed 0.65 sec test 557 Start 557: proton-dose-1-stats 557: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-1-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 557: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 557: Test timeout computed to be: 1500 552: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 552: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-a.tfm 552: EXPECTED_ERRNO is 433: RETVAL: 0 433: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-1.mha 433: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-2.mha 433: Launching registration worker thread 433: Inside registration worker thread 433: Doing registration stage 433: [1] xf_in->m_type = 0, xf_out->m_type = 0 433: RESAMPLE 1 1: (1 1 1), (1 1 1) 433: RESAMPLE 1 1: (1 1 1), (1 1 1) 433: volume_calc_grad complete. 433: Computing grid search extent. 433: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) 433: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) 433: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) 433: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) 433: [0 0 0] -0.366001 * 433: Global grid search 433: [-10 -10 -10] -0.0657023 433: [-6 -10 -10] -0.0463935 433: [-2 -10 -10] -0.0578569 433: [2 -10 -10] -0.104587 433: [6 -10 -10] -0.134745 433: [10 -10 -10] -0.132346 433: [-10 -6 -10] -0.0447641 433: [-6 -6 -10] -0.0444838 433: [-2 -6 -10] -0.0804107 433: [2 -6 -10] -0.157649 433: [6 -6 -10] -0.217923 433: [10 -6 -10] -0.228427 433: [-10 -2 -10] -0.0363824 433: [-6 -2 -10] -0.0510381 433: [-2 -2 -10] -0.105651 433: [2 -2 -10] -0.207715 433: [6 -2 -10] -0.301396 433: [10 -2 -10] -0.331995 433: [-10 2 -10] -0.0360564 433: [-6 2 -10] -0.0510835 433: [-2 2 -10] -0.105603 433: [2 2 -10] -0.207349 433: [6 2 -10] -0.301597 433: [10 2 -10] -0.333546 433: [-10 6 -10] -0.043624 433: [-6 6 -10] -0.0435673 433: [-2 6 -10] -0.0792328 433: [2 6 -10] -0.15537 433: [6 6 -10] -0.21609 433: [10 6 -10] -0.229483 433: [-10 10 -10] -0.0625422 433: [-6 10 -10] -0.044456 433: [-2 10 -10] -0.0566679 433: [2 10 -10] -0.102753 433: [6 10 -10] -0.133354 433: [10 10 -10] -0.133022 433: [-10 -10 -6] -0.0447641 433: [-6 -10 -6] -0.0444838 433: [-2 -10 -6] -0.0804107 433: [2 -10 -6] -0.157649 433: [6 -10 -6] -0.217923 433: [10 -10 -6] -0.228427 433: [-10 -6 -6] -0.0419245 433: [-6 -6 -6] -0.0616512 433: [-2 -6 -6] -0.125976 433: [2 -6 -6] -0.24928 433: [6 -6 -6] -0.370675 * 433: [10 -6 -6] -0.41107 * 433: [-10 -2 -6] -0.0458151 433: [-6 -2 -6] -0.0813895 433: [-2 -2 -6] -0.168343 433: [2 -2 -6] -0.331623 433: [6 -2 -6] -0.520659 * 433: [10 -2 -6] -0.60981 * 433: [-10 2 -6] -0.0460451 433: [-6 2 -6] -0.0818015 433: [-2 2 -6] -0.168558 433: [2 2 -6] -0.330972 433: [6 2 -6] -0.519715 433: [10 2 -6] -0.610965 * 433: [-10 6 -6] -0.0416946 433: [-6 6 -6] -0.0613956 433: [-2 6 -6] -0.125047 433: [2 6 -6] -0.246207 433: [6 6 -6] -0.366747 433: [10 6 -6] -0.41144 433: [-10 10 -6] -0.043562 433: [-6 10 -6] -0.0440007 433: [-2 10 -6] -0.0795809 433: [2 10 -6] -0.155169 433: [6 10 -6] -0.215936 433: [10 10 -6] -0.22921 433: [-10 -10 -2] -0.0363824 433: [-6 -10 -2] -0.0510381 433: [-2 -10 -2] -0.105651 433: [2 -10 -2] -0.207715 433: [6 -10 -2] -0.301396 433: [10 -10 -2] -0.331995 433: [-10 -6 -2] -0.0458151 433: [-6 -6 -2] -0.0813895 433: [-2 -6 -2] -0.168343 433: [2 -6 -2] -0.331623 433: [6 -6 -2] -0.520659 433: [10 -6 -2] -0.60981 433: [-10 -2 -2] -0.0623074 433: [-6 -2 -2] -0.114225 433: [-2 -2 -2] -0.227442 433: [2 -2 -2] -0.450611 433: [6 -2 -2] -0.79525 * 433: [10 -2 -2] -1.06281 * 433: [-10 2 -2] -0.0628058 433: [-6 2 -2] -0.114854 433: [-2 2 -2] -0.227853 433: [2 2 -2] -0.45011 433: [6 2 -2] -0.79301 433: [10 2 -2] -1.06302 * 433: [-10 6 -2] -0.0464919 433: [-6 6 -2] -0.0817851 433: [-2 6 -2] -0.167859 433: [2 6 -2] -0.328807 433: [6 6 -2] -0.516135 433: [10 6 -2] -0.60998 433: [-10 10 -2] -0.036042 433: [-6 10 -2] -0.0508055 433: [-2 10 -2] -0.104874 433: [2 10 -2] -0.205278 433: [6 10 -2] -0.299375 433: [10 10 -2] -0.332915 433: [-10 -10 2] -0.0360564 433: [-6 -10 2] -0.0510835 433: [-2 -10 2] -0.105603 433: [2 -10 2] -0.207349 433: [6 -10 2] -0.301597 433: [10 -10 2] -0.333546 433: [-10 -6 2] -0.0460451 433: [-6 -6 2] -0.0818015 433: [-2 -6 2] -0.168558 433: [2 -6 2] -0.330972 433: [6 -6 2] -0.519715 433: [10 -6 2] -0.610965 433: [-10 -2 2] -0.0628058 433: [-6 -2 2] -0.114854 433: [-2 -2 2] -0.227853 433: [2 -2 2] -0.45011 433: [6 -2 2] -0.79301 433: [10 -2 2] -1.06302 433: [-10 2 2] -0.0634055 433: [-6 2 2] -0.115563 433: [-2 2 2] -0.228352 433: [2 2 2] -0.449777 433: [6 2 2] -0.791187 433: [10 2 2] -1.06397 * 433: [-10 6 2] -0.0467633 433: [-6 6 2] -0.0822511 433: [-2 6 2] -0.168209 433: [2 6 2] -0.328525 433: [6 6 2] -0.515825 433: [10 6 2] -0.611858 433: [-10 10 2] -0.0358199 433: [-6 10 2] -0.0509452 433: [-2 10 2] -0.104965 433: [2 10 2] -0.205182 433: [6 10 2] -0.299823 433: [10 10 2] -0.334637 433: [-10 -10 6] -0.043624 433: [-6 -10 6] -0.0435673 433: [-2 -10 6] -0.0792328 433: [2 -10 6] -0.15537 433: [6 -10 6] -0.21609 433: [10 -10 6] -0.229483 433: [-10 -6 6] -0.0416946 433: [-6 -6 6] -0.0613956 433: [-2 -6 6] -0.125047 433: [2 -6 6] -0.246207 433: [6 -6 6] -0.366747 433: [10 -6 6] -0.41144 433: [-10 -2 6] -0.0464919 433: [-6 -2 6] -0.0817851 433: [-2 -2 6] -0.167859 433: [2 -2 6] -0.328807 433: [6 -2 6] -0.516135 433: [10 -2 6] -0.60998 433: [-10 2 6] -0.0467633 433: [-6 2 6] -0.0822511 433: [-2 2 6] -0.168209 433: [2 2 6] -0.328525 433: [6 2 6] -0.515825 433: [10 2 6] -0.611858 433: [-10 6 6] -0.0420716 433: [-6 6 6] -0.0616282 433: [-2 6 6] -0.124622 433: [2 6 6] -0.244167 433: [6 6 6] -0.364463 433: [10 6 6] -0.413552 433: [-10 10 6] -0.042919 433: [-6 10 6] -0.0432268 433: [-2 10 6] -0.078484 433: [2 10 6] -0.153286 433: [6 10 6] -0.214701 433: [10 10 6] -0.230766 433: [-10 -10 10] -0.0625422 433: [-6 -10 10] -0.044456 433: [-2 -10 10] -0.0566679 433: [2 -10 10] -0.102753 433: [6 -10 10] -0.133354 433: [10 -10 10] -0.133022 433: [-10 -6 10] -0.043562 433: [-6 -6 10] -0.0440007 433: [-2 -6 10] -0.0795809 433: [2 -6 10] -0.155169 433: [6 -6 10] -0.215936 433: [10 -6 10] -0.22921 433: [-10 -2 10] -0.036042 433: [-6 -2 10] -0.0508055 433: [-2 -2 10] -0.104874 433: [2 -2 10] -0.205278 433: [6 -2 10] -0.299375 433: [10 -2 10] -0.332915 433: [-10 2 10] -0.0358199 433: [-6 2 10] -0.0509452 433: [-2 2 10] -0.104965 433: [2 2 10] -0.205182 433: [6 2 10] -0.299823 433: [10 2 10] -0.334637 433: [-10 6 10] -0.042919 433: [-6 6 10] -0.0432268 433: [-2 6 10] -0.078484 433: [2 6 10] -0.153286 433: [6 6 10] -0.214701 433: [10 6 10] -0.230766 433: [-10 10 10] -0.0609081 433: [-6 10 10] -0.0434493 433: [-2 10 10] -0.0559197 433: [2 10 10] -0.101407 433: [6 10 10] -0.132652 433: [10 10 10] -0.134325 433: [2] xf_out->m_type = 1, xf_in->m_type = 0 433: Doing registration stage 433: [1] xf_in->m_type = 1, xf_out->m_type = 0 433: RESAMPLE 1 1: (1 1 1), (1 1 1) 433: RESAMPLE 1 1: (1 1 1), (1 1 1) 433: volume_calc_grad complete. 433: Computing grid search extent. 433: Dimension 0, mo=0.8 F=(-25, 50) M=(-25, 50) 433: Dimension 1, mo=0.8 F=(-25, 50) M=(-25, 50) 433: Dimension 2, mo=0.8 F=(-25, 50) M=(-25, 50) 433: Native grid search extent: (-10, 10), (-10, 10), (-10, 10) 433: [10 2 2] -1.06397 * 433: Local grid search 433: [6.4 -1.6 -1.6] -0.883407 433: [8.8 -1.6 -1.6] -1.12376 * 433: [11.2 -1.6 -1.6] -1.12967 * 433: [13.6 -1.6 -1.6] -0.914496 433: [6.4 0.8 -1.6] -0.913773 433: [8.8 0.8 -1.6] -1.19876 * 433: [11.2 0.8 -1.6] -1.20812 * 433: [13.6 0.8 -1.6] -0.955547 433: [6.4 3.2 -1.6] -0.766583 433: [8.8 3.2 -1.6] -0.916579 433: [11.2 3.2 -1.6] -0.920988 433: [13.6 3.2 -1.6] -0.784372 433: [6.4 5.6 -1.6] -0.576245 433: [8.8 5.6 -1.6] -0.655686 433: [11.2 5.6 -1.6] -0.653953 433: [13.6 5.6 -1.6] -0.574785 433: [6.4 -1.6 0.8] -0.913773 433: [8.8 -1.6 0.8] -1.19876 433: [11.2 -1.6 0.8] -1.20812 433: [13.6 -1.6 0.8] -0.955547 433: [6.4 0.8 0.8] -0.948114 433: [8.8 0.8 0.8] -1.30327 * 433: [11.2 0.8 0.8] -1.3196 * 433: [13.6 0.8 0.8] -1.00372 433: [6.4 3.2 0.8] -0.788348 433: [8.8 3.2 0.8] -0.951558 433: [11.2 3.2 0.8] -0.958168 433: [13.6 3.2 0.8] -0.812303 433: [6.4 5.6 0.8] -0.588765 433: [8.8 5.6 0.8] -0.673812 433: [11.2 5.6 0.8] -0.67344 433: [13.6 5.6 0.8] -0.591068 433: [6.4 -1.6 3.2] -0.766583 433: [8.8 -1.6 3.2] -0.916579 433: [11.2 -1.6 3.2] -0.920988 433: [13.6 -1.6 3.2] -0.784372 433: [6.4 0.8 3.2] -0.788348 433: [8.8 0.8 3.2] -0.951558 433: [11.2 0.8 3.2] -0.958168 433: [13.6 0.8 3.2] -0.812303 433: [6.4 3.2 3.2] -0.677918 433: [8.8 3.2 3.2] -0.791729 433: [11.2 3.2 3.2] -0.794915 433: [13.6 3.2 3.2] -0.688998 433: [6.4 5.6 3.2] -0.520489 433: [8.8 5.6 3.2] -0.585515 433: [11.2 5.6 3.2] -0.583462 433: [13.6 5.6 3.2] -0.515484 433: [6.4 -1.6 5.6] -0.576245 433: [8.8 -1.6 5.6] -0.655686 433: [11.2 -1.6 5.6] -0.653953 433: [13.6 -1.6 5.6] -0.574785 433: [6.4 0.8 5.6] -0.588765 433: [8.8 0.8 5.6] -0.673812 433: [11.2 0.8 5.6] -0.67344 433: [13.6 0.8 5.6] -0.591068 433: [6.4 3.2 5.6] -0.520489 433: [8.8 3.2 5.6] -0.585515 433: [11.2 3.2 5.6] -0.583462 433: [13.6 3.2 5.6] -0.515484 433: [6.4 5.6 5.6] -0.412801 433: [8.8 5.6 5.6] -0.455339 433: [11.2 5.6 5.6] -0.451028 433: [13.6 5.6 5.6] -0.399458 433: [2] xf_out->m_type = 1, xf_in->m_type = 1 433: ** Registration worker thread finished. 433: Warping... 433: plm_warp_itk: xform_to_itk_vf 433: plm_warp_itk: convert_to_itk 433: plm_warp_itk: warping... 433: Saving image... 433: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.mha 433: Load: 0.0924389 433: Run: 3.766 433: Save: 0.012229 433: Total: 3.87067 433: Finished! 433: 433: STDERR: 433: Not an error 550: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 550: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1.mha 550: EXPECTED_ERRNO is 544: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 544: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-vf.nrrd 544: EXPECTED_ERRNO is 306/578 Test #433: plm-reg-trans-mi-a .................... Passed 4.24 sec 547: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 547: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1.mha 547: EXPECTED_ERRNO is 469: RETVAL: 0 469: STDOUT: Min: 4.000 0.000 0.000 469: Mean: 4.000 0.000 0.000 469: Max: 4.000 0.000 0.000 469: Mean abs: 4.000 0.000 0.000 469: Ave len: 4.000 469: Jacobian: MINJAC 1 MAXJAC 1 469: Energy: MINDIL 0 MAXDIL 0 469: MAXSTRAIN 0 TOTSTRAIN 0 469: Second derivatives: MINSECDER 0 MAXSECDER 0 469: AVESECDER 0 INTSECDER 0 469: Max second derivative at: (1 1 1) 469: 469: STDERR: test 434 Start 434: plm-reg-trans-mi-a-stats 434: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-trans-mi-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 434: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 434: Test timeout computed to be: 1500 469: Not an error 307/578 Test #469: plm-scale-vf-a-stats .................. Passed 0.42 sec test 576 Start 576: wed-a 576: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=wed-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=wed;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 576: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 576: Test timeout computed to be: 1500 478: RETVAL: 0 478: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 256 478: 478: STDERR: 478: Not an error 554: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 554: PARMS is xf-invert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-b.tfm;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-b.tfm 554: EXPECTED_ERRNO is 308/578 Test #478: plm-thumbnail-b-stats ................. Passed 0.41 sec test 16 Start 16: gauss-7 16: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gauss-7" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-7.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;20 20 20" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 16: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 16: Test timeout computed to be: 1500 557: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 557: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1.mha 557: EXPECTED_ERRNO is 454: RETVAL: 0 454: STDOUT: Min: 0.000 -2.171 -2.171 454: Mean: 12.523 -0.008 -0.008 454: Max: 21.615 1.811 1.811 454: Mean abs: 12.523 0.418 0.418 454: Ave len: 12.552 454: Jacobian: MINJAC -6.97561 MAXJAC 1.2529 454: Energy: MINDIL -6.7 MAXDIL 0.315048 454: MAXSTRAIN 47 TOTSTRAIN 30590.5 454: Second derivatives: MINSECDER 0 MAXSECDER 1.27e+03 454: AVESECDER 7.37 INTSECDER 9.21e+05 454: Max second derivative at: (30 20 27) 454: 454: STDERR: 454: Not an error 457: RETVAL: 0 457: STDOUT: MIN -999.857544 AVE -878.686035 MAX -12.873093 NONZERO 6859 NUMVOX 6859 457: 457: STDERR: 457: Not an error 194: RETVAL: 0 194: STDOUT: MIN 0.000000 AVE 0.000280 MAX 1.000000 NONZERO 280 NUMVOX 1000000 194: 194: STDERR: 194: Not an error 309/578 Test #454: plm-compose-c-stats ................... Passed 0.52 sec 310/578 Test #457: plm-resample-a-stats .................. Passed 0.49 sec test 23 Start 23: gw-lung-a 23: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gw-lung-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-a.mha;--pattern;lung;--lung-tumor-pos;-5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 23: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 23: Test timeout computed to be: 1500 test 24 Start 24: gw-lung-b 24: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gw-lung-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-b.mha;--pattern;lung;--lung-tumor-pos;0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 24: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 24: Test timeout computed to be: 1500 434: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 434: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a.mha 434: EXPECTED_ERRNO is 311/578 Test #194: plm-convert-dicom-c-stats ............. Passed 0.41 sec test 25 Start 25: gw-lung-c 25: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=gw-lung-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-c.mha;--pattern;lung;--lung-tumor-pos;5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 25: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 25: Test timeout computed to be: 1500 562: RETVAL: 0 562: STDOUT: 562: [PLAN] 562: patient : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha 562: target : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha 562: dose_out : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.mha 562: debug : 0 562: dose norm : 100 562: 562: [SETTINGS] 562: flavor: d ** 562: homo_approx: n ** 562: ray_step: 1 ** 562: aperture_out: ** 562: proj_dose_out: ** 562: proj_img_out: ** 562: range_comp_out: ** 562: sigma_out: ** 562: wed_out: ** 562: beam_weight: 1 ** 562: 562: [GEOMETRY & APERTURE] 562: source: 0 -2000 0 ** 562: isocenter: 0 0 0 ** 562: vup: 0 0 1 ** 562: offset: 1500 ** 562: ap_center in pixels: 20 20 ** 562: i_res: 41 41 ** 562: spacing: 3.75 3.75 ** 562: source_size: 0 ** 562: ap_file_in: ** 562: rc_file_in: ** 562: smearing: 5 ** 562: 562: [PEAK] 562: E0: P0 562: spread: P0 562: weight: P0 562: 562: Start dose calculation Beam 1 562: Plan_calc::compute_beam_dose(beam) entry -- 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: Priority 5. Target detected. 562: Computing beam modifiers for passive target 562: Compute target wepl_min_max... 562: Apply lateral smearing to the target... 562: Smearing = 5.000000, Smearing_ap = 3.750000 562: Strel size = (1,1), (3,3) 562: 0 1 0 562: 1 1 1 562: 0 1 0 562: Apply proximal and distal ... 562: Compute max wed... 562: Compute the aperture... 562: Compute range compensator... 562: Max wed in the target is 117.554 mm. 562: Min wed in the target is 88.5526 mm. 562: ires = 41 41 562: proj_vol dim = 41 41 302 562: prescription min/max: 88.5526 mm, 117.554 mm. 562: 562: 22 Mono-energetic BP used: 562: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 562: Adding peak to sobp (130.000000, 1.000000, 0.895612) [0.010000, 140.000000] 562: Adding peak to sobp (129.000000, 1.000000, 0.143334) [0.010000, 140.000000] 562: Adding peak to sobp (128.000000, 1.000000, 0.216499) [0.010000, 140.000000] 562: Adding peak to sobp (127.000000, 1.000000, 0.160917) [0.010000, 140.000000] 562: Adding peak to sobp (126.000000, 1.000000, 0.140926) [0.010000, 140.000000] 562: Adding peak to sobp (125.000000, 1.000000, 0.124814) [0.010000, 140.000000] 562: Adding peak to sobp (124.000000, 1.000000, 0.113261) [0.010000, 140.000000] 562: Adding peak to sobp (123.000000, 1.000000, 0.102876) [0.010000, 140.000000] 562: Adding peak to sobp (122.000000, 1.000000, 0.096644) [0.010000, 140.000000] 562: Adding peak to sobp (121.000000, 1.000000, 0.089393) [0.010000, 140.000000] 562: Adding peak to sobp (120.000000, 1.000000, 0.083935) [0.010000, 140.000000] 562: Adding peak to sobp (119.000000, 1.000000, 0.078956) [0.010000, 140.000000] 562: Adding peak to sobp (118.000000, 1.000000, 0.074957) [0.010000, 140.000000] 562: Adding peak to sobp (117.000000, 1.000000, 0.071067) [0.010000, 140.000000] 562: Adding peak to sobp (116.000000, 1.000000, 0.067803) [0.010000, 140.000000] 562: Adding peak to sobp (115.000000, 1.000000, 0.064859) [0.010000, 140.000000] 562: Adding peak to sobp (114.000000, 1.000000, 0.062045) [0.010000, 140.000000] 562: Adding peak to sobp (113.000000, 1.000000, 0.059730) [0.010000, 140.000000] 562: Adding peak to sobp (112.000000, 1.000000, 0.057228) [0.010000, 140.000000] 562: Adding peak to sobp (111.000000, 1.000000, 0.056709) [0.010000, 140.000000] 562: Adding peak to sobp (110.000000, 1.000000, 0.045556) [0.010000, 140.000000] 562: Adding peak to sobp (109.000000, 1.000000, 0.079095) [0.010000, 140.000000] 562: **** (1) 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.87445 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000474397 mm. 562: Global sigma computed - Global sigma_max = 2.87445 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.86823 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000479245 mm. 562: Global sigma computed - Global sigma_max = 2.86823 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.81247 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000485151 mm. 562: Global sigma computed - Global sigma_max = 2.81247 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.80639 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000490292 mm. 562: Global sigma computed - Global sigma_max = 2.80639 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.74919 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000495583 mm. 562: Global sigma computed - Global sigma_max = 2.74919 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.69289 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000501994 mm. 562: Global sigma computed - Global sigma_max = 2.69289 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.68596 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000506613 mm. 562: Global sigma computed - Global sigma_max = 2.68596 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.62886 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000512341 mm. 562: Global sigma computed - Global sigma_max = 2.62886 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.57127 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000517222 mm. 562: Global sigma computed - Global sigma_max = 2.57127 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.56307 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000523251 mm. 562: Global sigma computed - Global sigma_max = 2.56307 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.50537 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000528418 mm. 562: Global sigma computed - Global sigma_max = 2.50537 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.49685 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000534772 mm. 562: Global sigma computed - Global sigma_max = 2.49685 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.4384 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000540249 mm. 562: Global sigma computed - Global sigma_max = 2.4384 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.42949 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000546957 mm. 562: Global sigma computed - Global sigma_max = 2.42949 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.37035 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000552773 mm. 562: Global sigma computed - Global sigma_max = 2.37035 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.36098 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000559867 mm. 562: Global sigma computed - Global sigma_max = 2.36098 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.30119 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000566053 mm. 562: Global sigma computed - Global sigma_max = 2.30119 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.29132 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000573569 mm. 562: Global sigma computed - Global sigma_max = 2.29132 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.23096 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000580162 mm. 562: Global sigma computed - Global sigma_max = 2.23096 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.22053 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000588138 mm. 562: Global sigma computed - Global sigma_max = 2.22053 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.15969 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000595178 mm. 562: Global sigma computed - Global sigma_max = 2.15969 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: sigma_img: 41 41 302 562: dim: 41 41 302 562: Sigma patient computed - sigma_pt_max = 2.14863 mm. 562: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 562: Sigma range compensator computed - sigma_rc_max = 0.000603663 mm. 562: Global sigma computed - Global sigma_max = 2.14863 mm. 562: Setting RVRTS = 1 562: FPD = 347.500001, BPD = 649.116731 562: 41 41 302 562: Raw dose at the maximum (0, 5, 0) : 10.689 A.U. 562: Dose normalized at the maximum to 1 x 100%. 562: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm 562: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.mha 562: Sigma: 0.229969 seconds 562: Calc: 2.485826 seconds 562: IO: 0.175139 seconds 562: Reformat: 0.019027 seconds 562: Misc: 0.050086 seconds 562: done. 562: 562: Total execution time : 2.960356 seconds. 562: 562: STDERR: 562: Not an error 312/578 Test #562: proton-dose-4d ........................ Passed 3.38 sec 559: RETVAL: 0 559: STDOUT: 559: [PLAN] 559: patient : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha 559: target : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha 559: dose_out : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha 559: debug : 0 559: dose norm : 100 559: 559: [SETTINGS] 559: flavor: a ** 559: homo_approx: n ** 559: ray_step: 1 ** 559: aperture_out: ** 559: proj_dose_out: ** 559: proj_img_out: ** 559: range_comp_out: ** 559: sigma_out: ** 559: wed_out: ** 559: beam_weight: 1 ** 559: 559: [GEOMETRY & APERTURE] 559: source: 0 -2000 0 ** 559: isocenter: 0 0 0 ** 559: vup: 0 0 1 ** 559: offset: 1500 ** 559: ap_center in pixels: 20 20 ** 559: i_res: 41 41 ** 559: spacing: 3.75 3.75 ** 559: source_size: 0 ** 559: ap_file_in: ** 559: rc_file_in: ** 559: smearing: 5 ** 559: 559: [PEAK] 559: E0: P0 559: spread: P0 559: weight: P0 559: 559: Start dose calculation Beam 1 559: Plan_calc::compute_beam_dose(beam) entry -- 559: Setting RVRTS = 1 559: FPD = 347.500001, BPD = 649.116731 559: 41 41 302 559: Setting RVRTS = 1 559: FPD = 347.500001, BPD = 649.116731 559: 41 41 302 559: Setting RVRTS = 1 559: FPD = 347.500001, BPD = 649.116731 559: 41 41 302 559: Priority 5. Target detected. 559: Computing beam modifiers for passive target 559: Compute target wepl_min_max... 559: Apply lateral smearing to the target... 559: Smearing = 5.000000, Smearing_ap = 3.750000 559: Strel size = (1,1), (3,3) 559: 0 1 0 559: 1 1 1 559: 0 1 0 559: Apply proximal and distal ... 559: Compute max wed... 559: Compute the aperture... 559: Compute range compensator... 559: Max wed in the target is 117.554 mm. 559: Min wed in the target is 88.5526 mm. 559: ires = 41 41 559: proj_vol dim = 41 41 302 559: prescription min/max: 88.5526 mm, 117.554 mm. 559: 559: 22 Mono-energetic BP used: 559: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 559: Adding peak to sobp (130.000000, 1.000000, 0.895612) [0.010000, 140.000000] 559: Adding peak to sobp (129.000000, 1.000000, 0.143334) [0.010000, 140.000000] 559: Adding peak to sobp (128.000000, 1.000000, 0.216499) [0.010000, 140.000000] 559: Adding peak to sobp (127.000000, 1.000000, 0.160917) [0.010000, 140.000000] 559: Adding peak to sobp (126.000000, 1.000000, 0.140926) [0.010000, 140.000000] 559: Adding peak to sobp (125.000000, 1.000000, 0.124814) [0.010000, 140.000000] 559: Adding peak to sobp (124.000000, 1.000000, 0.113261) [0.010000, 140.000000] 559: Adding peak to sobp (123.000000, 1.000000, 0.102876) [0.010000, 140.000000] 559: Adding peak to sobp (122.000000, 1.000000, 0.096644) [0.010000, 140.000000] 559: Adding peak to sobp (121.000000, 1.000000, 0.089393) [0.010000, 140.000000] 559: Adding peak to sobp (120.000000, 1.000000, 0.083935) [0.010000, 140.000000] 559: Adding peak to sobp (119.000000, 1.000000, 0.078956) [0.010000, 140.000000] 559: Adding peak to sobp (118.000000, 1.000000, 0.074957) [0.010000, 140.000000] 559: Adding peak to sobp (117.000000, 1.000000, 0.071067) [0.010000, 140.000000] 559: Adding peak to sobp (116.000000, 1.000000, 0.067803) [0.010000, 140.000000] 559: Adding peak to sobp (115.000000, 1.000000, 0.064859) [0.010000, 140.000000] 559: Adding peak to sobp (114.000000, 1.000000, 0.062045) [0.010000, 140.000000] 559: Adding peak to sobp (113.000000, 1.000000, 0.059730) [0.010000, 140.000000] 559: Adding peak to sobp (112.000000, 1.000000, 0.057228) [0.010000, 140.000000] 559: Adding peak to sobp (111.000000, 1.000000, 0.056709) [0.010000, 140.000000] 559: Adding peak to sobp (110.000000, 1.000000, 0.045556) [0.010000, 140.000000] 559: Adding peak to sobp (109.000000, 1.000000, 0.079095) [0.010000, 140.000000] 559: **** (1) 559: Raw dose at the maximum (15, 15, 10) : 1.016 A.U. 559: Dose normalized at the maximum to 1 x 100%. 559: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm 559: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha 559: Sigma: 0.000000 seconds 559: Calc: 2.867783 seconds 559: IO: 0.153646 seconds 559: Reformat: 0.000000 seconds 559: Misc: 0.046839 seconds 559: done. 559: 559: Total execution time : 3.126307 seconds. 559: 559: STDERR: 487: RETVAL: 0 487: STDOUT: MIN 0.000000 AVE 0.023163 MAX 1.000000 NONZERO 1271 NUMVOX 54872 487: 487: STDERR: 487: Not an error test 563 Start 563: proton-dose-4d-stats 563: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 563: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 563: Test timeout computed to be: 1500 559: Not an error 16: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 16: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-7.mha;--output-type;float;--pattern;gauss;--origin;-25 -25 -25;--dim;38 38 38;--volume-size;50 50 50;--background;-1000;--foreground;0;--gauss-center;10 0 0;--gauss-std;20 20 20 16: EXPECTED_ERRNO is 313/578 Test #559: proton-dose-4a ........................ Passed 3.41 sec 314/578 Test #487: plm-union-stats ....................... Passed 0.45 sec test 560 Start 560: proton-dose-4a-stats 560: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-4a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 560: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 560: Test timeout computed to be: 1500 test 26 Start 26: pat-1 26: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=pat-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--pattern;rect;--dim;30 30 30;--background;-1000;--foreground;0;--rect-size;20 20 20;--origin;-150 -150 -150;--spacing;10 10 10;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/pat-1-dicom;--filenames-without-uids;--patient-id;PATIENT-ID;--patient-name;NAME^PATIENT;--series-description;Series Description Here" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 26: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 26: Test timeout computed to be: 1500 576: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 576: PARMS is wed;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a.txt 576: EXPECTED_ERRNO is 23: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 23: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-a.mha;--pattern;lung;--lung-tumor-pos;-5 23: EXPECTED_ERRNO is 24: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 24: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-b.mha;--pattern;lung;--lung-tumor-pos;0 24: EXPECTED_ERRNO is 563: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 563: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d.mha 563: EXPECTED_ERRNO is 25: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 25: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-c.mha;--pattern;lung;--lung-tumor-pos;5 25: EXPECTED_ERRNO is 463: RETVAL: 0 463: STDOUT: Min: 1.219 -2.075 -2.075 463: Mean: 6.707 -0.405 -0.405 463: Max: 13.751 1.148 1.148 463: Mean abs: 6.707 0.706 0.706 463: Ave len: 6.825 463: Jacobian: MINJAC 0.718591 MAXJAC 1.16208 463: Energy: MINDIL -0.304 MAXDIL 0.195159 463: MAXSTRAIN 0.277 TOTSTRAIN -132.025 463: Second derivatives: MINSECDER 0.000246 MAXSECDER 0.00708 463: AVESECDER 0.00129 INTSECDER 161 463: Max second derivative at: (16 16 16) 463: 463: STDERR: 463: Not an error 560: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 560: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a.mha 560: EXPECTED_ERRNO is 481: RETVAL: 0 481: STDOUT: MIN 0.000000 AVE 8.203125 MAX 119.000000 NONZERO 32 NUMVOX 256 481: 481: STDERR: 481: Not an error 502: RETVAL: 0 502: STDOUT: Min: 0.875 -1.519 -1.519 502: Mean: 5.773 0.002 0.002 502: Max: 12.239 1.255 1.255 502: Mean abs: 5.773 0.518 0.518 502: Ave len: 5.853 502: Jacobian: MINJAC 0.815198 MAXJAC 1.18104 502: Energy: MINDIL -0.184 MAXDIL 0.216011 502: MAXSTRAIN 0.267 TOTSTRAIN 1114.81 502: Second derivatives: MINSECDER 0.00025 MAXSECDER 0.00723 502: AVESECDER 0.00122 INTSECDER 152 502: Max second derivative at: (15 15 15) 502: 502: STDERR: 502: Not an error 315/578 Test #463: plm-resample-c-stats .................. Passed 0.56 sec 466: RETVAL: 0 466: STDOUT: MIN -400.000000 AVE -3.732322 MAX 0.000000 NONZERO 512 NUMVOX 54872 466: 466: STDERR: test 35 Start 35: rect-6 35: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-6" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-6.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;0 -300 -200;--direction-cosines;rotated-2" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 35: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 35: Test timeout computed to be: 1500 466: Not an error 316/578 Test #466: plm-scale-a-stats ..................... Passed 0.56 sec 317/578 Test #481: plm-thumbnail-c-stats ................. Passed 0.52 sec 318/578 Test #502: plm-warp-a-stats ...................... Passed 0.41 sec test 36 Start 36: rect-7 36: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-7" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-7.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;100 300 -100;--direction-cosines;rotated-3" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 36: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 36: Test timeout computed to be: 1500 test 41 Start 41: rect-10-roi-2 41: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-10-roi-2" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-2.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-220 60 -60 60 -60 60" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 41: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 41: Test timeout computed to be: 1500 test 50 Start 50: rect-18 50: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rect-18" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-18.mha;--pattern;rect;--dim;15 15 15;--background;-1000;--foreground;0;--rect-size;-100 100 -100 100 -100 100;--origin;-150 -150 -150;--spacing;20 20 20" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 50: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 50: Test timeout computed to be: 1500 26: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 26: PARMS is synth;--pattern;rect;--dim;30 30 30;--background;-1000;--foreground;0;--rect-size;20 20 20;--origin;-150 -150 -150;--spacing;10 10 10;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/pat-1-dicom;--filenames-without-uids;--patient-id;PATIENT-ID;--patient-name;NAME^PATIENT;--series-description;Series Description Here 26: EXPECTED_ERRNO is 484: RETVAL: 0 484: STDOUT: MIN 0.000000 AVE 0.013285 MAX 1.000000 NONZERO 729 NUMVOX 54872 484: 484: STDERR: 484: Not an error 475: RETVAL: 0 475: STDOUT: MIN 0.000000 AVE 76.906250 MAX 255.000000 NONZERO 88 NUMVOX 256 475: 475: STDERR: 475: Not an error 490: RETVAL: 0 490: STDOUT: MIN 0.000000 AVE 0.306732 MAX 1.000000 NONZERO 16831 NUMVOX 54872 490: 490: STDERR: 490: Not an error 513: RETVAL: 0 513: STDOUT: MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872 513: 513: STDERR: 513: Not an error 319/578 Test #475: plm-thumbnail-a-stats ................. Passed 0.57 sec 320/578 Test #484: plm-intersect-stats ................... Passed 0.55 sec 321/578 Test #490: plm-threshold-a-stats ................. Passed 0.51 sec 322/578 Test #513: plm-warp-d-stats ...................... Passed 0.39 sec test 60 Start 60: rgc-1 60: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=rgc-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rgc-1.mha;--output-type;float;--pattern;rect;--dim;10 10 1;--background;0;--foreground;30;--rect-size;0 10 0 5 0 0;--origin;0 0 0;--spacing;1 1 1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 60: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 60: Test timeout computed to be: 1500 test 69 Start 69: xramp-1 69: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=xramp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xramp-1.mha;--output-type;float;--pattern;xramp;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 69: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 69: Test timeout computed to be: 1500 test 70 Start 70: yramp-1 70: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=yramp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/yramp-1.mha;--output-type;float;--pattern;yramp;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 70: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 70: Test timeout computed to be: 1500 test 71 Start 71: zramp-1 71: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=zramp-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/zramp-1.mha;--output-type;float;--pattern;zramp;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 71: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 71: Test timeout computed to be: 1500 41: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 41: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-2.mha;--output-type;uchar;--pattern;rect;--dim;38 38 38;--background;0;--foreground;1;--rect-size;-220 60 -60 60 -60 60 41: EXPECTED_ERRNO is 36: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 36: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-7.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;100 300 -100;--direction-cosines;rotated-3 36: EXPECTED_ERRNO is 35: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 35: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-6.mha;--output-type;float;--pattern;rect;--dim;38 38 38;--background;-1000;--foreground;0;--rect-size;-50 50 -50 50 -50 50;--origin;0 -300 -200;--direction-cosines;rotated-2 35: EXPECTED_ERRNO is 519: RETVAL: 0 519: STDOUT: MIN -1000.000000 AVE -763.820862 MAX 0.000000 NONZERO 42085 NUMVOX 54872 519: 519: STDERR: 519: Not an error 525: RETVAL: 0 525: STDOUT: MIN 0.000000 AVE 114.545189 MAX 996.552368 NONZERO 43320 NUMVOX 54872 525: 525: STDERR: 525: Not an error 50: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 50: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-18.mha;--pattern;rect;--dim;15 15 15;--background;-1000;--foreground;0;--rect-size;-100 100 -100 100 -100 100;--origin;-150 -150 -150;--spacing;20 20 20 50: EXPECTED_ERRNO is 60: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 60: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rgc-1.mha;--output-type;float;--pattern;rect;--dim;10 10 1;--background;0;--foreground;30;--rect-size;0 10 0 5 0 0;--origin;0 0 0;--spacing;1 1 1 60: EXPECTED_ERRNO is 323/578 Test #519: plm-warp-g-stats-1 .................... Passed 0.39 sec 324/578 Test #525: plm-warp-i-stats-1 .................... Passed 0.38 sec test 76 Start 76: vf-gaussian-1 76: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=vf-gaussian-1" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-gaussian-1.mha;--xf-gauss;--gauss-center;0 0 0;--gauss-mag;10 20 0;--gauss-std;100 100 100;--dim;38 38 38" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 76: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 76: Test timeout computed to be: 1500 test 78 Start 78: vf-zero-check 78: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero-stats.stdout.txt" "-DREGEX=Mean abs: *([-0-9.]*)" "-DLOWER_THRESH=0.000" "-DUPPER_THRESH=0.000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 78: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 78: Test timeout computed to be: 1500 69: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 69: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xramp-1.mha;--output-type;float;--pattern;xramp;--dim;38 38 38 69: EXPECTED_ERRNO is 507: RETVAL: 0 507: STDOUT: MIN -999.876892 AVE -775.668274 MAX 0.000000 NONZERO 49099 NUMVOX 54872 507: 507: STDERR: 507: Not an error 493: RETVAL: 0 493: STDOUT: MIN 0.000000 AVE 0.671290 MAX 1.000000 NONZERO 36835 NUMVOX 54872 493: 493: STDERR: 493: Not an error 71: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 71: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/zramp-1.mha;--output-type;float;--pattern;zramp;--dim;38 38 38 71: EXPECTED_ERRNO is 505: RETVAL: 0 505: STDOUT: Min: 0.875 -1.519 -1.519 505: Mean: 5.773 0.002 0.002 505: Max: 12.239 1.255 1.255 505: Mean abs: 5.773 0.518 0.518 505: Ave len: 5.853 505: Jacobian: MINJAC 0.815198 MAXJAC 1.18104 505: Energy: MINDIL -0.184 MAXDIL 0.216011 505: MAXSTRAIN 0.267 TOTSTRAIN 1114.81 505: Second derivatives: MINSECDER 0.00025 MAXSECDER 0.00723 505: AVESECDER 0.00122 INTSECDER 152 505: Max second derivative at: (15 15 15) 505: 505: STDERR: 70: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 70: PARMS is synth;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/yramp-1.mha;--output-type;float;--pattern;yramp;--dim;38 38 38 70: EXPECTED_ERRNO is 505: Not an error 325/578 Test #493: plm-threshold-b-stats ................. Passed 0.54 sec test 80 Start 80: vf-trans-1-check 80: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=10.000" "-DUPPER_THRESH=10.000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 80: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 80: Test timeout computed to be: 1500 326/578 Test #505: plm-warp-b-stats-1 .................... Passed 0.51 sec 327/578 Test #507: plm-warp-b-stats-2 .................... Passed 0.50 sec test 82 Start 82: vf-trans-2-check 82: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2-stats.stdout.txt" "-DREGEX=Mean: *[-0-9.]* *([-0-9.]*)" "-DLOWER_THRESH=10.000" "-DUPPER_THRESH=10.000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 82: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 82: Test timeout computed to be: 1500 test 84 Start 84: vf-radial-1-check 84: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1-stats.stdout.txt" "-DREGEX=Mean abs: *([-0-9.]*)" "-DLOWER_THRESH=5.15" "-DUPPER_THRESH=5.16" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 84: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 84: Test timeout computed to be: 1500 496: RETVAL: 0 496: STDOUT: MIN 0.000000 AVE 0.021978 MAX 1.000000 NONZERO 1206 NUMVOX 54872 496: 496: STDERR: 496: Not an error 76: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 76: PARMS is synth-vf;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-gaussian-1.mha;--xf-gauss;--gauss-center;0 0 0;--gauss-mag;10 20 0;--gauss-std;100 100 100;--dim;38 38 38 76: EXPECTED_ERRNO is 510: RETVAL: 0 510: STDOUT: MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872 510: 510: STDERR: 510: Not an error 78: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-zero-stats.stdout.txt 78: -- REGEX is Mean abs: *([-0-9.]*) 78: -- LOWER_THRESH is 0.000 78: -- UPPER_THRESH is 0.000 78: -- PARSED VALUE=|Mean abs: 0.000 0.000 0.000| 78: -- PARSED_VALUE=|0.000| 78: Not an error 528: RETVAL: 0 528: STDOUT: about to xform_convert 528: bspline_xform_initialize 528: Warning: vox_per_rgn was less than 4. 528: Warning: vox_per_rgn was less than 4. 528: Warning: vox_per_rgn was less than 4. 528: rdims = (1,1,1) 528: vox_per_rgn = (4,4,4) 528: cdims = (4 4 4) 528: did xform_convert 528: 528: STDERR: 528: Not an error 328/578 Test #496: plm-threshold-c-stats ................. Passed 0.57 sec 329/578 Test #510: plm-warp-c-stats ...................... Passed 0.52 sec test 86 Start 86: plm-compare-a-check 86: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-a.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=7.76" "-DUPPER_THRESH=7.78" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 86: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 86: Test timeout computed to be: 1500 test 88 Start 88: plm-compare-b-check 88: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-b.stdout.txt" "-DREGEX=Ave len: *([-0-9.]*)" "-DLOWER_THRESH=14.141" "-DUPPER_THRESH=14.143" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 88: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 88: Test timeout computed to be: 1500 80: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-1-stats.stdout.txt 80: -- REGEX is Mean: *([-0-9.]*) 80: -- LOWER_THRESH is 10.000 80: -- UPPER_THRESH is 10.000 80: -- PARSED VALUE=|Mean: 10.000 0.000 0.000| 80: -- PARSED_VALUE=|10.000| 80: Not an error 82: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-trans-2-stats.stdout.txt 82: -- REGEX is Mean: *[-0-9.]* *([-0-9.]*) 82: -- LOWER_THRESH is 10.000 82: -- UPPER_THRESH is 10.000 82: -- PARSED VALUE=|Mean: 0.000 10.000 0.000| 82: -- PARSED_VALUE=|10.000| 82: Not an error 330/578 Test #528: plm-xf-convert-b ...................... Passed 0.45 sec 331/578 Test #78: vf-zero-check ......................... Passed 0.07 sec 332/578 Test #80: vf-trans-1-check ...................... Passed 0.06 sec test 90 Start 90: plm-compare-c-check 90: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-c.stdout.txt" "-DREGEX=Ave len: *([-0-9.]*)" "-DLOWER_THRESH=14.141" "-DUPPER_THRESH=14.143" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 90: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 90: Test timeout computed to be: 1500 test 93 Start 93: plm-diff-a-check 93: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=7.76" "-DUPPER_THRESH=7.78" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 93: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 93: Test timeout computed to be: 1500 test 96 Start 96: plm-diff-b-check 96: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-stats.stdout.txt" "-DREGEX=Ave len: *([-0-9.]*)" "-DLOWER_THRESH=14.141" "-DUPPER_THRESH=14.143" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 96: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 96: Test timeout computed to be: 1500 544: RETVAL: 0 544: STDOUT: Min: 7.161 -0.245 -0.245 544: Mean: 8.546 0.041 0.041 544: Max: 9.698 0.313 0.313 544: Mean abs: 8.546 0.144 0.144 544: Ave len: 8.549 544: Jacobian: MINJAC 0.996419 MAXJAC 1.00089 544: Energy: MINDIL -0.00359 MAXDIL 0.00089729 544: MAXSTRAIN 0.000899 TOTSTRAIN -0.0111365 544: Second derivatives: MINSECDER 6.15e-05 MAXSECDER 8.87e-05 544: AVESECDER 9.37e-06 INTSECDER 1.17e+03 544: Max second derivative at: (1 1 1) 544: 544: STDERR: 544: Not an error 522: RETVAL: 0 522: STDOUT: MIN 0.000000 AVE 113.750511 MAX 996.000000 NONZERO 42867 NUMVOX 54872 522: 522: STDERR: 522: Not an error 333/578 Test #82: vf-trans-2-check ...................... Passed 0.07 sec test 98 Start 98: demons-a-check 98: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.stdout.txt" "-DREGEX=^Mean: *([0-9.]*)" "-DLOWER_THRESH=3.4" "-DUPPER_THRESH=3.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 98: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 98: Test timeout computed to be: 1500 552: RETVAL: 0 552: STDOUT: 552: STDERR: 552: Not an error 334/578 Test #544: plm-xf-convert-i-stats ................ Passed 0.40 sec test 101 Start 101: drr-a-check 101: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=0.045" "-DUPPER_THRESH=0.055" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 101: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 101: Test timeout computed to be: 1500 88: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-b.stdout.txt 88: -- REGEX is Ave len: *([-0-9.]*) 88: -- LOWER_THRESH is 14.141 88: -- UPPER_THRESH is 14.143 88: -- PARSED VALUE=|Ave len: 14.142| 88: -- PARSED_VALUE=|14.142| 88: Not an error 86: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-a.stdout.txt 86: -- REGEX is AVE *([-0-9.]*) 86: -- LOWER_THRESH is 7.76 86: -- UPPER_THRESH is 7.78 86: -- PARSED VALUE=|MIN -558.201904 AVE 7.769665 MAX 558.680786| 86: -- PARSED_VALUE=|7.769665| 86: Not an error 93: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-a-stats.stdout.txt 93: -- REGEX is AVE *([-0-9.]*) 93: -- LOWER_THRESH is 7.76 93: -- UPPER_THRESH is 7.78 93: -- PARSED VALUE=|MIN -558.201904 AVE 7.769665 MAX 558.680786 NONZERO 54872 NUMVOX 54872| 93: -- PARSED_VALUE=|7.769665| 93: Not an error 335/578 Test #522: plm-warp-h-stats-1 .................... Passed 0.52 sec 336/578 Test #552: xf-invert-vrs-a ....................... Passed 0.39 sec 337/578 Test #88: plm-compare-b-check ................... Passed 0.05 sec 338/578 Test #93: plm-diff-a-check ...................... Passed 0.03 sec 84: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-radial-1-stats.stdout.txt 84: -- REGEX is Mean abs: *([-0-9.]*) 84: -- LOWER_THRESH is 5.15 84: -- UPPER_THRESH is 5.16 84: -- PARSED VALUE=|Mean abs: 5.157 5.157 5.157| 84: -- PARSED_VALUE=|5.157| 84: Not an error 554: RETVAL: 0 554: STDOUT: 554: STDERR: 554: Not an error test 104 Start 104: drr-b-check 104: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=0.045" "-DUPPER_THRESH=0.055" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 104: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 104: Test timeout computed to be: 1500 test 107 Start 107: drr-c-check 107: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-c-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=0.045" "-DUPPER_THRESH=0.055" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 107: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 107: Test timeout computed to be: 1500 test 110 Start 110: fdk-cpu-a-check 110: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=-987.5" "-DUPPER_THRESH=-986.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 110: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 110: Test timeout computed to be: 1500 test 116 Start 116: landmark-warp-a-check-1 116: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-992.0" "-DUPPER_THRESH=-991.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 116: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 116: Test timeout computed to be: 1500 550: RETVAL: 0 550: STDOUT: Min: -10.000 0.000 0.000 550: Mean: -9.999 0.000 0.000 550: Max: -9.963 0.000 0.000 550: Mean abs: 9.999 0.000 0.000 550: Ave len: 9.999 550: Jacobian: MINJAC 0.998589 MAXJAC 1 550: Energy: MINDIL -0.00141 MAXDIL 3.62396e-08 550: MAXSTRAIN 3.62e-08 TOTSTRAIN -2.78625 550: Second derivatives: MINSECDER 0 MAXSECDER 2.19e-06 550: AVESECDER 5.23e-08 INTSECDER 6.54 550: Max second derivative at: (2 1 1) 550: 550: STDERR: 550: Not an error 16: RETVAL: 0 16: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-7.mha 16: 16: STDERR: 16: Not an error 90: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compare-c.stdout.txt 90: -- REGEX is Ave len: *([-0-9.]*) 90: -- LOWER_THRESH is 14.141 90: -- UPPER_THRESH is 14.143 90: -- PARSED VALUE=|Ave len: 14.142| 90: -- PARSED_VALUE=|14.142| 90: Not an error 516: RETVAL: 0 516: STDOUT: Type = float 516: Planes = 1 516: Origin = -147.5140 -381.8964 -136.9799 516: Size = 38 38 38 516: Spacing = 13.1579 13.1579 13.1579 516: Direction = 0.9254 0.0180 -0.3785 0.1632 0.8826 0.4410 0.3420 -0.4698 0.8138 516: 516: STDERR: 516: Not an error 98: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/demons-a.stdout.txt 98: -- REGEX is ^Mean: *([0-9.]*) 98: -- LOWER_THRESH is 3.4 98: -- UPPER_THRESH is 3.5 98: -- PARSED VALUE=|Mean: 3.443 0.016 0.016| 98: -- PARSED_VALUE=|3.443| 98: Not an error 339/578 Test #516: plm-warp-f-stats-1 .................... Passed 0.56 sec 340/578 Test #550: xf-invert-vf-trans-1-stats ............ Passed 0.43 sec 341/578 Test #554: xf-invert-vrs-b ....................... Passed 0.40 sec 342/578 Test #16: gauss-7 ............................... Passed 0.35 sec 343/578 Test #84: vf-radial-1-check ..................... Passed 0.11 sec 344/578 Test #86: plm-compare-a-check ................... Passed 0.09 sec 345/578 Test #98: demons-a-check ........................ Passed 0.05 sec test 118 Start 118: landmark-warp-a-check-2 118: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-stats-2.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-23.2" "-DUPPER_THRESH=-22.7" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 118: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 118: Test timeout computed to be: 1500 test 121 Start 121: landmark-warp-b-check-1 121: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-992.2" "-DUPPER_THRESH=-991.8" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 121: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 121: Test timeout computed to be: 1500 test 123 Start 123: landmark-warp-b-check-2 123: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-stats-2.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-1.55" "-DUPPER_THRESH=-1.4" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 123: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 123: Test timeout computed to be: 1500 test 126 Start 126: landmark-warp-c-check-1 126: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-992.0" "-DUPPER_THRESH=-991.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 126: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 126: Test timeout computed to be: 1500 test 128 Start 128: landmark-warp-c-check-2 128: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-stats-2.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-1.6" "-DUPPER_THRESH=-1.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 128: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 128: Test timeout computed to be: 1500 test 129 Start 129: landmark-warp-d 129: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=landmark-warp-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=lm-warp;-a;tps;-f;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-img.mha;-V;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-vf.mha;-L;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d.fcsv" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 129: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 129: Test timeout computed to be: 1500 test 132 Start 132: plm-add-a-check 132: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-1000.1" "-DUPPER_THRESH=-999.9" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 132: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 132: Test timeout computed to be: 1500 346/578 Test #90: plm-compare-c-check ................... Passed 0.12 sec 541: RETVAL: 0 541: STDOUT: Min: 20.000 0.000 0.000 541: Mean: 20.000 0.000 0.000 541: Max: 20.000 0.000 0.000 541: Mean abs: 20.000 0.000 0.000 541: Ave len: 20.000 541: Jacobian: MINJAC 1 MAXJAC 1 541: Energy: MINDIL 0 MAXDIL 0 541: MAXSTRAIN 0 TOTSTRAIN 0 541: Second derivatives: MINSECDER 0 MAXSECDER 0 541: AVESECDER 0 INTSECDER 0 541: Max second derivative at: (1 1 1) 541: 541: STDERR: 541: Not an error 347/578 Test #541: plm-xf-convert-h-stats ................ Passed 0.52 sec 96: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-diff-b-stats.stdout.txt 96: -- REGEX is Ave len: *([-0-9.]*) 96: -- LOWER_THRESH is 14.141 96: -- UPPER_THRESH is 14.143 96: -- PARSED VALUE=|Ave len: 14.142| 96: -- PARSED_VALUE=|14.142| 96: Not an error 348/578 Test #96: plm-diff-b-check ...................... Passed 0.11 sec 101: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-a-stats.stdout.txt 101: -- REGEX is MAX *([-0-9.]*) 101: -- LOWER_THRESH is 0.045 101: -- UPPER_THRESH is 0.055 101: -- PARSED VALUE=|MIN 0.000000 AVE 0.000135 MAX 0.050109 NUM 16384| 101: -- PARSED_VALUE=|0.050109| 101: Not an error 349/578 Test #101: drr-a-check ........................... Passed 0.09 sec 104: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-b-stats.stdout.txt 104: -- REGEX is MAX *([-0-9.]*) 104: -- LOWER_THRESH is 0.045 104: -- UPPER_THRESH is 0.055 104: -- PARSED VALUE=|MIN 0.000000 AVE 0.000138 MAX 0.049634 NUM 16384| 104: -- PARSED_VALUE=|0.049634| 104: Not an error 350/578 Test #104: drr-b-check ........................... Passed 0.08 sec 107: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/drr-c-stats.stdout.txt 107: -- REGEX is MAX *([-0-9.]*) 107: -- LOWER_THRESH is 0.045 107: -- UPPER_THRESH is 0.055 107: -- PARSED VALUE=|MIN 0.000000 AVE 0.000125 MAX 0.050494 NUM 16384| 107: -- PARSED_VALUE=|0.050494| 107: Not an error 351/578 Test #107: drr-c-check ........................... Passed 0.07 sec test 135 Start 135: plm-add-b-check 135: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-500.1" "-DUPPER_THRESH=-499.9" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 135: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 135: Test timeout computed to be: 1500 test 138 Start 138: plm-add-vf-a-check 138: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=20.000" "-DUPPER_THRESH=20.000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 138: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 138: Test timeout computed to be: 1500 test 141 Start 141: plm-add-vf-b-check 141: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=5.000" "-DUPPER_THRESH=5.000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 141: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 141: Test timeout computed to be: 1500 test 144 Start 144: plm-adjust-a-check 144: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-819.55" "-DUPPER_THRESH=-819.54" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 144: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 144: Test timeout computed to be: 1500 test 147 Start 147: plm-adjust-b-check 147: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-819.55" "-DUPPER_THRESH=-819.54" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 147: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 147: Test timeout computed to be: 1500 test 150 Start 150: plm-adjust-c-check 150: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-819.55" "-DUPPER_THRESH=-819.54" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 150: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 150: Test timeout computed to be: 1500 547: RETVAL: 0 547: STDOUT: Min: 0.000 0.000 0.000 547: Mean: 0.000 0.000 0.000 547: Max: 0.000 0.000 0.000 547: Mean abs: 0.000 0.000 0.000 547: Ave len: 0.000 547: Jacobian: MINJAC 1 MAXJAC 1 547: Energy: MINDIL 0 MAXDIL 0 547: MAXSTRAIN 0 TOTSTRAIN 0 547: Second derivatives: MINSECDER 0 MAXSECDER 0 547: AVESECDER 0 INTSECDER 0 547: Max second derivative at: (1 1 1) 547: 547: STDERR: 547: Not an error 352/578 Test #547: xf-invert-vf-zero-1-stats ............. Passed 0.55 sec 23: RETVAL: 0 23: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-a.mha 23: 23: STDERR: 23: Not an error 353/578 Test #23: gw-lung-a ............................. Passed 0.44 sec 110: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-a-stats.stdout.txt 110: -- REGEX is MAX *([-0-9.]*) 110: -- LOWER_THRESH is -987.5 110: -- UPPER_THRESH is -986.5 110: -- PARSED VALUE=|MIN -1000.000000 AVE -999.859619 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600| 110: -- PARSED_VALUE=|-987.021973| 110: Not an error 354/578 Test #110: fdk-cpu-a-check ....................... Passed 0.12 sec 563: RETVAL: 0 563: STDOUT: MIN 0.000000 AVE 0.386816 MAX 100.000000 NONZERO 3614 NUMVOX 216000 563: 563: STDERR: 563: Not an error 355/578 Test #563: proton-dose-4d-stats .................. Passed 0.40 sec 116: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-stats-1.stdout.txt 116: -- REGEX is AVE *([-0-9.]*) 116: -- LOWER_THRESH is -992.0 116: -- UPPER_THRESH is -991.5 116: -- PARSED VALUE=|MIN -1000.000000 AVE -991.799744 MAX 0.000000 NONZERO 54494 NUMVOX 54872| 116: -- PARSED_VALUE=|-991.799744| 116: Not an error 356/578 Test #116: landmark-warp-a-check-1 ............... Passed 0.11 sec 24: RETVAL: 0 24: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-b.mha 24: 24: STDERR: 24: Not an error 357/578 Test #24: gw-lung-b ............................. Passed 0.43 sec 532: RETVAL: 0 532: STDOUT: MIN -999.979248 AVE -745.231567 MAX 0.000000 NONZERO 5851 NUMVOX 6859 532: 532: STDERR: 532: Not an error 358/578 Test #532: plm-xf-convert-d-warp-1-stats ......... Passed 0.62 sec 60: RETVAL: 0 60: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rgc-1.mha 60: 60: STDERR: 60: Not an error 359/578 Test #60: rgc-1 ................................. Passed 0.30 sec 36: RETVAL: 0 36: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-7.mha 36: 36: STDERR: 36: Not an error 360/578 Test #36: rect-7 ................................ Passed 0.34 sec 118: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-a-stats-2.stdout.txt 118: -- REGEX is Mean: *([-0-9.]*) 118: -- LOWER_THRESH is -23.2 118: -- UPPER_THRESH is -22.7 118: -- PARSED VALUE=|Mean: -22.960 0.011 0.000| 118: -- PARSED_VALUE=|-22.960| 118: Not an error 361/578 Test #118: landmark-warp-a-check-2 ............... Passed 0.11 sec 123: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-stats-2.stdout.txt 123: -- REGEX is Mean: *([-0-9.]*) 123: -- LOWER_THRESH is -1.55 123: -- UPPER_THRESH is -1.4 123: -- PARSED VALUE=|Mean: -1.500 0.018 0.000| 123: -- PARSED_VALUE=|-1.500| 123: Not an error 362/578 Test #123: landmark-warp-b-check-2 ............... Passed 0.09 sec 126: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-stats-1.stdout.txt 126: -- REGEX is AVE *([-0-9.]*) 126: -- LOWER_THRESH is -992.0 126: -- UPPER_THRESH is -991.5 126: -- PARSED VALUE=|MIN -1000.000122 AVE -991.665894 MAX 0.000000 NONZERO 54484 NUMVOX 54872| 126: -- PARSED_VALUE=|-991.665894| 126: Not an error 363/578 Test #126: landmark-warp-c-check-1 ............... Passed 0.09 sec test 153 Start 153: plm-adjust-d-check 153: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-782.97" "-DUPPER_THRESH=-782.96" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 153: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 153: Test timeout computed to be: 1500 test 156 Start 156: plm-adjust-e-check 156: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-1298.87" "-DUPPER_THRESH=-1298.86" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 156: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 156: Test timeout computed to be: 1500 test 159 Start 159: plm-adjust-f-check 159: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-0.0196" "-DUPPER_THRESH=-0.0195" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 159: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 159: Test timeout computed to be: 1500 test 162 Start 162: plm-adjust-g-check 162: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-0.0001" "-DUPPER_THRESH=0.0001" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 162: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 162: Test timeout computed to be: 1500 test 165 Start 165: plm-adjust-h-check 165: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-0.2481" "-DUPPER_THRESH=-0.248" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 165: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 165: Test timeout computed to be: 1500 test 168 Start 168: plm-adjust-i-check 168: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-921.5941" "-DUPPER_THRESH=-921.5940" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 168: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 168: Test timeout computed to be: 1500 test 171 Start 171: plm-adjust-j-check 171: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-921.6276" "-DUPPER_THRESH=-921.6274" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 171: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 171: Test timeout computed to be: 1500 test 174 Start 174: plm-boundary-a-check 174: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=1056" "-DUPPER_THRESH=1056" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 174: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 174: Test timeout computed to be: 1500 test 177 Start 177: plm-boundary-b-check 177: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=1056" "-DUPPER_THRESH=1056" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 177: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 177: Test timeout computed to be: 1500 test 180 Start 180: plm-boundary-c-check 180: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=840" "-DUPPER_THRESH=840" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 180: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 180: Test timeout computed to be: 1500 test 183 Start 183: plm-boundary-d-check 183: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=2.614" "-DUPPER_THRESH=2.615" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 183: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 183: Test timeout computed to be: 1500 test 186 Start 186: plm-boundary-e-check 186: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=2.141" "-DUPPER_THRESH=2.143" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 186: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 186: Test timeout computed to be: 1500 128: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-stats-2.stdout.txt 128: -- REGEX is Mean: *([-0-9.]*) 128: -- LOWER_THRESH is -1.6 128: -- UPPER_THRESH is -1.5 128: -- PARSED VALUE=|Mean: -1.562 0.019 0.000| 128: -- PARSED_VALUE=|-1.562| 128: Not an error 121: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-b-stats-1.stdout.txt 121: -- REGEX is AVE *([-0-9.]*) 121: -- LOWER_THRESH is -992.2 121: -- UPPER_THRESH is -991.8 121: -- PARSED VALUE=|MIN -1000.000122 AVE -992.005493 MAX 0.000000 NONZERO 54512 NUMVOX 54872| 121: -- PARSED_VALUE=|-992.005493| 121: Not an error 129: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 129: PARMS is lm-warp;-a;tps;-f;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;-m;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv;-I;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;-O;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-img.mha;-V;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-vf.mha;-L;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d.fcsv 129: EXPECTED_ERRNO is 132: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-a-stats.stdout.txt 132: -- REGEX is AVE *([-0-9.]*) 132: -- LOWER_THRESH is -1000.1 132: -- UPPER_THRESH is -999.9 132: -- PARSED VALUE=|MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872| 132: -- PARSED_VALUE=|-1000.000000| 132: Not an error 50: RETVAL: 0 50: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-18.mha 50: 50: STDERR: 50: Not an error 571: RETVAL: 0 571: STDOUT: 571: [PLAN] 571: patient : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha 571: target : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-2.mha 571: dose_out : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha 571: debug : 0 571: dose norm : 100 571: 571: [SETTINGS] 571: flavor: a ** 571: homo_approx: n ** 571: ray_step: 1 ** 571: aperture_out: ** 571: proj_dose_out: ** 571: proj_img_out: ** 571: range_comp_out: ** 571: sigma_out: ** 571: wed_out: ** 571: beam_weight: 1 ** 571: 571: [GEOMETRY & APERTURE] 571: source: 0 -2000 0 ** 571: isocenter: 0 0 0 ** 571: vup: 0 0 1 ** 571: offset: 1500 ** 571: ap_center in pixels: 20 20 ** 571: i_res: 41 41 ** 571: spacing: 3.75 3.75 ** 571: source_size: 0 ** 571: ap_file_in: ** 571: rc_file_in: ** 571: smearing: 5 ** 571: 571: [PEAK] 571: E0: P0 571: spread: P0 571: weight: P0 571: 571: Start dose calculation Beam 1 571: Plan_calc::compute_beam_dose(beam) entry -- 571: Setting RVRTS = 1 571: FPD = 347.500001, BPD = 649.116731 571: 41 41 302 571: Setting RVRTS = 1 571: FPD = 347.500001, BPD = 649.116731 571: 41 41 302 571: Setting RVRTS = 1 571: FPD = 347.500001, BPD = 649.116731 571: 41 41 302 571: Priority 5. Target detected. 571: Compute target wepl_min_max... 571: Apply lateral smearing to the target... 571: Smearing = 5.000000, Smearing_ap = 3.750000 571: Strel size = (1,1), (3,3) 571: 0 1 0 571: 1 1 1 571: 0 1 0 571: Apply proximal and distal ... 571: Compute max wed... 571: Compute the aperture... 571: Max wed in the target is 117.554 mm. 571: Min wed in the target is 88.5523 mm. 571: Min and max depths in the PTV (target + margins): 88.5523 mm and 117.554 mm. 571: Min and max energies for treating the PTV: 109 MeV and 130 MeV. 571: 571: 22 Mono-energetic BP used: 571: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 571: Optimization of the particle number map for any mono-energetic slice in progress... 571: Adding peak to sobp (130.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (129.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (128.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (127.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (126.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (125.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (124.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (123.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (122.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (121.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (120.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (119.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (118.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (117.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (116.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (115.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (114.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (113.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (112.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (111.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (110.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Adding peak to sobp (109.000000, 1.000000, 1.000000) [0.010000, 140.000000] 571: Raw dose at the maximum (-15, 15, -10) : 1.01597 A.U. 571: Dose normalized at the maximum to 1 x 100%. 571: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm 571: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha 571: Sigma: 0.000000 seconds 571: Calc: 2.987024 seconds 571: IO: 0.146675 seconds 571: Reformat: 0.000000 seconds 571: Misc: 0.018644 seconds 571: done. 571: 571: Total execution time : 3.193918 seconds. 571: 571: STDERR: 571: Not an error 25: RETVAL: 0 25: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gw/lung-c.mha 25: 25: STDERR: 25: Not an error 71: RETVAL: 0 71: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/zramp-1.mha 71: 71: STDERR: 71: Not an error 135: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-b-stats.stdout.txt 135: -- REGEX is AVE *([-0-9.]*) 135: -- LOWER_THRESH is -500.1 135: -- UPPER_THRESH is -499.9 135: -- PARSED VALUE=|MIN -500.000000 AVE -500.000000 MAX -500.000000 NONZERO 54872 NUMVOX 54872| 135: -- PARSED_VALUE=|-500.000000| 135: Not an error 138: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-a-stats.stdout.txt 138: -- REGEX is Mean: *([-0-9.]*) 138: -- LOWER_THRESH is 20.000 138: -- UPPER_THRESH is 20.000 138: -- PARSED VALUE=|Mean: 20.000 0.000 0.000| 138: -- PARSED_VALUE=|20.000| 138: Not an error 141: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-add-vf-b-stats.stdout.txt 141: -- REGEX is Mean: *([-0-9.]*) 141: -- LOWER_THRESH is 5.000 141: -- UPPER_THRESH is 5.000 141: -- PARSED VALUE=|Mean: 5.000 5.000 0.000| 141: -- PARSED_VALUE=|5.000| 141: Not an error 144: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-a-stats.stdout.txt 144: -- REGEX is AVE *([-0-9.]*) 144: -- LOWER_THRESH is -819.55 144: -- UPPER_THRESH is -819.54 144: -- PARSED VALUE=|MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872| 144: -- PARSED_VALUE=|-819.546265| 144: Not an error 364/578 Test #571: proton-dose-6a ........................ Passed 3.71 sec 365/578 Test #50: rect-18 ............................... Passed 0.39 sec 366/578 Test #121: landmark-warp-b-check-1 ............... Passed 0.17 sec 367/578 Test #128: landmark-warp-c-check-2 ............... Passed 0.16 sec 368/578 Test #132: plm-add-a-check ....................... Passed 0.15 sec 369/578 Test #135: plm-add-b-check ....................... Passed 0.13 sec 370/578 Test #138: plm-add-vf-a-check .................... Passed 0.12 sec 371/578 Test #144: plm-adjust-a-check .................... Passed 0.11 sec test 572 Start 572: proton-dose-6a-stats 572: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-6a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 572: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 572: Test timeout computed to be: 1500 test 189 Start 189: plm-convert-dicom-a-check 189: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-stats.stdout.txt" "-DREGEX= 0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=1648003" "-DUPPER_THRESH=1648003" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 189: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 189: Test timeout computed to be: 1500 test 192 Start 192: plm-convert-dicom-b-check 192: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-stats.stdout.txt" "-DREGEX=Patient Position . (.*[^ ]) *$" "-DMATCH_STRING=FFS" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckString.cmake" 192: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 192: Test timeout computed to be: 1500 test 195 Start 195: plm-convert-dicom-c-check 195: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=280" "-DUPPER_THRESH=280" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 195: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 195: Test timeout computed to be: 1500 test 196 Start 196: plm-convert-dicom-d 196: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/non-existant-directory/;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-d.nrrd" "-DEXPECTED_ERRNO=1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 196: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 196: Test timeout computed to be: 1500 test 197 Start 197: plm-convert-dicom-e 197: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/tmp/;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-e.nrrd" "-DEXPECTED_ERRNO=1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 197: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 197: Test timeout computed to be: 1500 test 198 Start 198: plm-convert-dicom-f 198: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom/rtss.dcm;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-f-dicom;--referenced-ct;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 198: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 198: Test timeout computed to be: 1500 test 201 Start 201: plm-convert-dicom-donut-a-check 201: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-stats.stdout.txt" "-DREGEX=S *0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=2623" "-DUPPER_THRESH=2623" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 201: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 201: Test timeout computed to be: 1500 372/578 Test #25: gw-lung-c ............................. Passed 0.54 sec 373/578 Test #71: zramp-1 ............................... Passed 0.39 sec 374/578 Test #141: plm-add-vf-b-check .................... Passed 0.15 sec 557: RETVAL: 0 557: STDOUT: MIN 0.000000 AVE 0.143515 MAX 70.000000 NONZERO 775 NUMVOX 216000 557: 557: STDERR: 557: Not an error 375/578 Test #557: proton-dose-1-stats ................... Passed 0.61 sec 147: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-b-stats.stdout.txt 147: -- REGEX is AVE *([-0-9.]*) 147: -- LOWER_THRESH is -819.55 147: -- UPPER_THRESH is -819.54 147: -- PARSED VALUE=|MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872| 147: -- PARSED_VALUE=|-819.546265| 147: Not an error 376/578 Test #147: plm-adjust-b-check .................... Passed 0.13 sec 535: RETVAL: 0 535: STDOUT: MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872 535: 535: STDERR: 535: Not an error 377/578 Test #535: plm-xf-convert-d-warp-2-stats ......... Passed 0.71 sec 150: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-c-stats.stdout.txt 150: -- REGEX is AVE *([-0-9.]*) 150: -- LOWER_THRESH is -819.55 150: -- UPPER_THRESH is -819.54 150: -- PARSED VALUE=|MIN -900.000000 AVE -819.546265 MAX 95.012482 NONZERO 54872 NUMVOX 54872| 150: -- PARSED_VALUE=|-819.546265| 150: Not an error 378/578 Test #150: plm-adjust-c-check .................... Passed 0.13 sec 76: RETVAL: 0 76: STDOUT: Setting header 76: Origin = -243.4211 -243.4211 -243.4211 76: Size = 38 38 38 76: Spacing = 13.1579 13.1579 13.1579 76: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 76: Header was set 76: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/vf-gaussian-1.mha 76: 76: STDERR: 76: Not an error 379/578 Test #76: vf-gaussian-1 ......................... Passed 0.38 sec 434: RETVAL: 0 434: STDOUT: MIN -999.826416 AVE -612.681030 MAX 0.000000 NONZERO 39701 NUMVOX 54872 434: 434: STDERR: 434: Not an error 380/578 Test #434: plm-reg-trans-mi-a-stats .............. Passed 0.60 sec 35: RETVAL: 0 35: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-6.mha 35: 35: STDERR: 35: Not an error 381/578 Test #35: rect-6 ................................ Passed 0.47 sec 560: RETVAL: 0 560: STDOUT: MIN 0.000000 AVE 0.266114 MAX 100.000000 NONZERO 932 NUMVOX 216000 560: 560: STDERR: 560: Not an error 382/578 Test #560: proton-dose-4a-stats .................. Passed 0.51 sec 70: RETVAL: 0 70: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/yramp-1.mha 70: 70: STDERR: 70: Not an error 383/578 Test #70: yramp-1 ............................... Passed 0.40 sec 41: RETVAL: 0 41: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-2.mha 41: 41: STDERR: 41: Not an error 384/578 Test #41: rect-10-roi-2 ......................... Passed 0.45 sec 69: RETVAL: 0 69: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xramp-1.mha 69: 69: STDERR: 69: Not an error 385/578 Test #69: xramp-1 ............................... Passed 0.41 sec 153: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-d-stats.stdout.txt 153: -- REGEX is AVE *([-0-9.]*) 153: -- LOWER_THRESH is -782.97 153: -- UPPER_THRESH is -782.96 153: -- PARSED VALUE=|MIN -800.000000 AVE -782.961060 MAX -600.000000 NONZERO 54872 NUMVOX 54872| 153: -- PARSED_VALUE=|-782.961060| 153: Not an error 386/578 Test #153: plm-adjust-d-check .................... Passed 0.11 sec 156: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-e-stats.stdout.txt 156: -- REGEX is AVE *([-0-9.]*) 156: -- LOWER_THRESH is -1298.87 156: -- UPPER_THRESH is -1298.86 156: -- PARSED VALUE=|MIN -1500.000000 AVE -1298.865601 MAX 987.531189 NONZERO 54872 NUMVOX 54872| 156: -- PARSED_VALUE=|-1298.865601| 156: Not an error 387/578 Test #156: plm-adjust-e-check .................... Passed 0.11 sec 159: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-f-stats.stdout.txt 159: -- REGEX is AVE *([-0-9.]*) 159: -- LOWER_THRESH is -0.0196 159: -- UPPER_THRESH is -0.0195 159: -- PARSED VALUE=|MIN -0.107574 AVE -0.019504 MAX 0.207060 NONZERO 54872 NUMVOX 54872| 159: -- PARSED_VALUE=|-0.019504| 159: Not an error 388/578 Test #159: plm-adjust-f-check .................... Passed 0.10 sec 162: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-g-stats.stdout.txt 162: -- REGEX is AVE *([-0-9.]*) 162: -- LOWER_THRESH is -0.0001 162: -- UPPER_THRESH is 0.0001 162: -- PARSED VALUE=|MIN -0.025301 AVE -0.000000 MAX 0.287606 NONZERO 54872 NUMVOX 54872| 162: -- PARSED_VALUE=|-0.000000| 162: Not an error 389/578 Test #162: plm-adjust-g-check .................... Passed 0.10 sec 165: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-h-stats.stdout.txt 165: -- REGEX is AVE *([-0-9.]*) 165: -- LOWER_THRESH is -0.2481 165: -- UPPER_THRESH is -0.248 165: -- PARSED VALUE=|MIN -0.283680 AVE -0.248078 MAX 0.156631 NONZERO 54872 NUMVOX 54872| 165: -- PARSED_VALUE=|-0.248078| 165: Not an error 390/578 Test #165: plm-adjust-h-check .................... Passed 0.09 sec 168: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-i-stats.stdout.txt 168: -- REGEX is AVE *([-0-9.]*) 168: -- LOWER_THRESH is -921.5941 168: -- UPPER_THRESH is -921.5940 168: -- PARSED VALUE=|MIN -1000.000000 AVE -921.594055 MAX -4.987521 NONZERO 54872 NUMVOX 54872| 168: -- PARSED_VALUE=|-921.594055| 168: Not an error 391/578 Test #168: plm-adjust-i-check .................... Passed 0.09 sec 171: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-adjust-j-stats.stdout.txt 171: -- REGEX is AVE *([-0-9.]*) 171: -- LOWER_THRESH is -921.6276 171: -- UPPER_THRESH is -921.6274 171: -- PARSED VALUE=|MIN -1000.000000 AVE -921.627502 MAX -4.987521 NONZERO 54872 NUMVOX 54872| 171: -- PARSED_VALUE=|-921.627502| 171: Not an error 392/578 Test #171: plm-adjust-j-check .................... Passed 0.08 sec 174: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-a-stats.stdout.txt 174: -- REGEX is NONZERO *([-0-9.]*) 174: -- LOWER_THRESH is 1056 174: -- UPPER_THRESH is 1056 174: -- PARSED VALUE=|MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000| 174: -- PARSED_VALUE=|1056| 174: Not an error 393/578 Test #174: plm-boundary-a-check .................. Passed 0.07 sec 177: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-b-stats.stdout.txt 177: -- REGEX is NONZERO *([-0-9.]*) 177: -- LOWER_THRESH is 1056 177: -- UPPER_THRESH is 1056 177: -- PARSED VALUE=|MIN 0.000000 AVE 0.132000 MAX 1.000000 NONZERO 1056 NUMVOX 8000| 177: -- PARSED_VALUE=|1056| 177: Not an error test 204 Start 204: plm-convert-dicom-donut-b-check 204: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-stats.stdout.txt" "-DREGEX=S *0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=1924" "-DUPPER_THRESH=1924" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 204: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 204: Test timeout computed to be: 1500 test 205 Start 205: plm-convert-dicom-donut-c 205: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-convert-dicom-donut-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha;--input-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt;--filenames-without-uids;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-c" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 205: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 205: Test timeout computed to be: 1500 test 208 Start 208: plm-convert-cxt-check 208: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt-stats.stdout.txt" "-DREGEX=S *0 *NVOX *([-0-9.]*)" "-DLOWER_THRESH=1648003" "-DUPPER_THRESH=1648003" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 208: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 208: Test timeout computed to be: 1500 test 212 Start 212: plm-convert-dose-scale-check 212: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=77.699" "-DUPPER_THRESH=77.7" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 212: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 212: Test timeout computed to be: 1500 test 215 Start 215: plm-crop-a-check-1 215: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a-stats.stdout.txt" "-DREGEX=^Size = (.*)$" "-DMATCH_STRING=11 16 3" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckString.cmake" 215: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 215: Test timeout computed to be: 1500 test 218 Start 218: plm-crop-b-check-1 218: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b-stats.stdout.txt" "-DREGEX=^Size = (.*)$" "-DMATCH_STRING=19 11 4" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckString.cmake" 218: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 218: Test timeout computed to be: 1500 test 221 Start 221: plm-crop-c-check-1 221: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c-stats.stdout.txt" "-DREGEX=^Size = (.*)$" "-DMATCH_STRING=15 15 15" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckString.cmake" 221: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 221: Test timeout computed to be: 1500 test 223 Start 223: plm-dice-a-check-1 223: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-a.stdout.txt" "-DREGEX=^DICE: *([-0-9.]*)" "-DLOWER_THRESH=0.799" "-DUPPER_THRESH=0.801" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 223: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 223: Test timeout computed to be: 1500 test 225 Start 225: plm-dice-b-check-1 225: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-b.stdout.txt" "-DREGEX=^DICE: *([-0-9.]*)" "-DLOWER_THRESH=0.999" "-DUPPER_THRESH=1.000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 225: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 225: Test timeout computed to be: 1500 test 227 Start 227: plm-dice-c-check-1 227: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=26.31" "-DUPPER_THRESH=26.32" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 227: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 227: Test timeout computed to be: 1500 test 228 Start 228: plm-dice-c-check-2 228: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Avg average Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=3.40" "-DUPPER_THRESH=3.41" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 228: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 228: Test timeout computed to be: 1500 test 229 Start 229: plm-dice-c-check-3 229: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=7.11" "-DUPPER_THRESH=7.12" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 229: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 229: Test timeout computed to be: 1500 test 230 Start 230: plm-dice-c-check-4 230: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Max average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=8.53" "-DUPPER_THRESH=8.54" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 230: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 230: Test timeout computed to be: 1500 test 231 Start 231: plm-dice-c-check-5 231: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt" "-DREGEX=^Percent .* \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=26.31" "-DUPPER_THRESH=26.32" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 231: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 231: Test timeout computed to be: 1500 test 233 Start 233: plm-dice-d-check-1 233: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=45.575" "-DUPPER_THRESH=45.585" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 233: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 233: Test timeout computed to be: 1500 test 234 Start 234: plm-dice-d-check-2 234: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Avg average Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=7.07" "-DUPPER_THRESH=7.08" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 234: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 234: Test timeout computed to be: 1500 test 235 Start 235: plm-dice-d-check-3 235: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=14.89" "-DUPPER_THRESH=14.90" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 235: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 235: Test timeout computed to be: 1500 test 236 Start 236: plm-dice-d-check-4 236: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Max average Hausdorff distance \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=18.38" "-DUPPER_THRESH=18.39" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 236: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 236: Test timeout computed to be: 1500 test 237 Start 237: plm-dice-d-check-5 237: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt" "-DREGEX=^Percent .* \(boundary\) = *([-0-9.]*)" "-DLOWER_THRESH=32.89" "-DUPPER_THRESH=32.90" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 237: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 237: Test timeout computed to be: 1500 test 239 Start 239: plm-dice-e-check-1 239: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-e.stdout.txt" "-DREGEX=^DICE: *([-0-9.]*)" "-DLOWER_THRESH=0.96550" "-DUPPER_THRESH=0.96554" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 239: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 239: Test timeout computed to be: 1500 test 240 Start 240: plm-dice-e-check-2 240: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-e.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=4" "-DUPPER_THRESH=4" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 240: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 240: Test timeout computed to be: 1500 test 242 Start 242: plm-dice-f-check-1 242: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt" "-DREGEX=^DICE: *([-0-9.]*)" "-DLOWER_THRESH=1" "-DUPPER_THRESH=1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 242: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 242: Test timeout computed to be: 1500 394/578 Test #177: plm-boundary-b-check .................. Passed 0.19 sec 180: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-c-stats.stdout.txt 180: -- REGEX is NONZERO *([-0-9.]*) 180: -- LOWER_THRESH is 840 180: -- UPPER_THRESH is 840 180: -- PARSED VALUE=|MIN 0.000000 AVE 0.105000 MAX 1.000000 NONZERO 840 NUMVOX 8000| 180: -- PARSED_VALUE=|840| 180: Not an error 395/578 Test #180: plm-boundary-c-check .................. Passed 0.18 sec 186: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-e-stats.stdout.txt 186: -- REGEX is AVE *([-0-9.]*) 186: -- LOWER_THRESH is 2.141 186: -- UPPER_THRESH is 2.143 186: -- PARSED VALUE=|MIN 0.000000 AVE 2.142000 MAX 56.000000 NONZERO 840 NUMVOX 8000| 186: -- PARSED_VALUE=|2.142000| 186: Not an error 396/578 Test #186: plm-boundary-e-check .................. Passed 0.18 sec 183: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-boundary-d-stats.stdout.txt 183: -- REGEX is AVE *([-0-9.]*) 183: -- LOWER_THRESH is 2.614 183: -- UPPER_THRESH is 2.615 183: -- PARSED VALUE=|MIN 0.000000 AVE 2.614500 MAX 56.000000 NONZERO 1056 NUMVOX 8000| 183: -- PARSED_VALUE=|2.614500| 183: Not an error 397/578 Test #183: plm-boundary-d-check .................. Passed 0.18 sec 26: RETVAL: 0 26: STDOUT: Doing extraction 26: Keyholizing structure 0. 26: Write: DoseGridScaling = 0.000000 26: 26: STDERR: 26: Not an error 398/578 Test #26: pat-1 ................................. Passed 0.63 sec 572: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 572: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a.mha 572: EXPECTED_ERRNO is 189: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-a-stats.stdout.txt 189: -- REGEX is 0 *NVOX *([-0-9.]*) 189: -- LOWER_THRESH is 1648003 189: -- UPPER_THRESH is 1648003 189: -- PARSED VALUE=|S 0 NVOX 1648003| 189: -- PARSED_VALUE=|1648003| 189: Not an error 399/578 Test #189: plm-convert-dicom-a-check ............. Passed 0.16 sec 192: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-b-stats.stdout.txt 192: -- REGEX is Patient Position . (.*[^ ]) *$ 192: -- MATCH_STRING is FFS 192: -- PARSED VALUE=|Patient Position = FFS | 192: -- PARSED_VALUE=|FFS| 192: -- LENGTH=3 192: -- |FFS|FFS| 192: Not an error 400/578 Test #192: plm-convert-dicom-b-check ............. Passed 0.16 sec 195: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-c-stats.stdout.txt 195: -- REGEX is NONZERO *([-0-9.]*) 195: -- LOWER_THRESH is 280 195: -- UPPER_THRESH is 280 195: -- PARSED VALUE=|MIN 0.000000 AVE 0.000280 MAX 1.000000 NONZERO 280 NUMVOX 1000000| 195: -- PARSED_VALUE=|280| 195: Not an error 401/578 Test #195: plm-convert-dicom-c-check ............. Passed 0.16 sec 196: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 196: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/non-existant-directory/;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-d.nrrd 196: EXPECTED_ERRNO is 1 197: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 197: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/tmp/;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-e.nrrd 197: EXPECTED_ERRNO is 1 test 243 Start 243: plm-dice-f-check-2 243: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt" "-DREGEX=^Hausdorff distance = *([-0-9.]*)" "-DLOWER_THRESH=0" "-DUPPER_THRESH=0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 243: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 243: Test timeout computed to be: 1500 test 244 Start 244: plm-dmap-a 244: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dmap-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dmap;--algorithm;maurer;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 244: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 244: Test timeout computed to be: 1500 test 246 Start 246: plm-dmap-c 246: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-dmap-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dmap;--algorithm;song_maurer;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-c.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 246: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 246: Test timeout computed to be: 1500 test 248 Start 248: plm-dvh-a-check-1 248: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv" "-DREGEX=^15,([-0-9.]*)," "-DLOWER_THRESH=0.999" "-DUPPER_THRESH=1.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 248: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 248: Test timeout computed to be: 1500 test 249 Start 249: plm-dvh-a-check-2 249: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv" "-DREGEX=^15.5,([-0-9.]*)," "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.001" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 249: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 249: Test timeout computed to be: 1500 test 251 Start 251: plm-dvh-b-check-1 251: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv" "-DREGEX=^15,([-0-9.]*)" "-DLOWER_THRESH=0.999" "-DUPPER_THRESH=1.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 251: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 251: Test timeout computed to be: 1500 test 252 Start 252: plm-dvh-b-check-2 252: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv" "-DREGEX=^15.5,([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.001" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 252: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 252: Test timeout computed to be: 1500 test 254 Start 254: plm-dvh-c-check-1 254: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv" "-DREGEX=^15,([-0-9.]*)" "-DLOWER_THRESH=0.780" "-DUPPER_THRESH=0.783" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 254: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 254: Test timeout computed to be: 1500 201: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-a-stats.stdout.txt 201: -- REGEX is S *0 *NVOX *([-0-9.]*) 201: -- LOWER_THRESH is 2623 201: -- UPPER_THRESH is 2623 201: -- PARSED VALUE=|S 0 NVOX 2623| 201: -- PARSED_VALUE=|2623| 201: Not an error 198: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 198: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-1-dicom/rtss.dcm;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-f-dicom;--referenced-ct;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom 198: EXPECTED_ERRNO is 129: RETVAL: 0 129: STDOUT: Hello world 129: Gonna convert pointsets 129: Pointset: 129: rect-2-0 -26.271700 -52.162899 46.052799 129: rect-2-1 65.870201 -52.543598 46.053001 129: rect-2-2 65.870201 52.543900 46.053001 129: rect-2-3 -25.510201 53.686199 46.053001 129: rect-2-4 -25.891001 -52.162899 -46.052502 129: rect-2-5 66.631699 -53.305099 -46.053001 129: rect-2-6 65.870201 53.305401 -46.053001 129: rect-2-7 -25.129499 53.686199 -46.053001 129: Conversion complete. 129: -26.2717 -52.1629 46.0528 129: 65.8702 -52.5436 46.053 129: 65.8702 52.5439 46.053 129: -25.5102 53.6862 46.053 129: -25.891 -52.1629 -46.0525 129: 66.6317 -53.3051 -46.053 129: 65.8702 53.3054 -46.053 129: -25.1295 53.6862 -46.053 129: Setting landmarks to TPS 129: Computing matrix 129: Setting xform 129: Converting to VF 129: Warping... 129: landmark 0 err 0.796775 mm 129: landmark 1 err 0.857190 mm 129: landmark 2 err 0.875645 mm 129: landmark 3 err 0.888102 mm 129: landmark 4 err 0.831617 mm 129: landmark 5 err 0.807000 mm 129: landmark 6 err 1.057389 mm 129: landmark 7 err 1.167740 mm 129: landmark RMS err 0.918533 mm 129: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-img.mha 129: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d-vf.mha 129: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-d.fcsv 129: 129: STDERR: 129: Not an error 204: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-b-stats.stdout.txt 204: -- REGEX is S *0 *NVOX *([-0-9.]*) 204: -- LOWER_THRESH is 1924 204: -- UPPER_THRESH is 1924 204: -- PARSED VALUE=|S 0 NVOX 1924| 204: -- PARSED_VALUE=|1924| 204: Not an error 205: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 205: PARMS is convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1.mha;--input-ss-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss.mha;--input-ss-list;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt;--filenames-without-uids;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dicom-donut-c 205: EXPECTED_ERRNO is 208: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-cxt-stats.stdout.txt 208: -- REGEX is S *0 *NVOX *([-0-9.]*) 208: -- LOWER_THRESH is 1648003 208: -- UPPER_THRESH is 1648003 208: -- PARSED VALUE=|S 0 NVOX 1648003| 208: -- PARSED_VALUE=|1648003| 208: Not an error 212: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-dose-scale-stats.stdout.txt 212: -- REGEX is MAX *([-0-9.]*) 212: -- LOWER_THRESH is 77.699 212: -- UPPER_THRESH is 77.7 212: -- PARSED VALUE=|MIN 0.000000 AVE 0.294533 MAX 77.699997 NONZERO 208 NUMVOX 54872| 212: -- PARSED_VALUE=|77.699997| 212: Not an error 215: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-a-stats.stdout.txt 215: -- REGEX is ^Size = (.*)$ 215: -- MATCH_STRING is 11 16 3 215: -- PARSED VALUE=|Size = 11 16 3| 215: -- PARSED_VALUE=|11 16 3| 215: -- LENGTH=7 215: -- |11 16 3|11 16 3| 215: Not an error 218: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-b-stats.stdout.txt 218: -- REGEX is ^Size = (.*)$ 218: -- MATCH_STRING is 19 11 4 218: -- PARSED VALUE=|Size = 19 11 4| 218: -- PARSED_VALUE=|19 11 4| 218: -- LENGTH=7 218: -- |19 11 4|19 11 4| 218: Not an error 221: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-crop-c-stats.stdout.txt 221: -- REGEX is ^Size = (.*)$ 221: -- MATCH_STRING is 15 15 15 221: -- PARSED VALUE=|Size = 15 15 15| 221: -- PARSED_VALUE=|15 15 15| 221: -- LENGTH=8 221: -- |15 15 15|15 15 15| 221: Not an error 223: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-a.stdout.txt 223: -- REGEX is ^DICE: *([-0-9.]*) 223: -- LOWER_THRESH is 0.799 223: -- UPPER_THRESH is 0.801 223: -- PARSED VALUE=|DICE: 0.800000| 223: -- PARSED_VALUE=|0.800000| 223: Not an error 225: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-b.stdout.txt 225: -- REGEX is ^DICE: *([-0-9.]*) 225: -- LOWER_THRESH is 0.999 225: -- UPPER_THRESH is 1.000 225: -- PARSED VALUE=|DICE: 1.000000| 225: -- PARSED_VALUE=|1.000000| 225: Not an error 227: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt 227: -- REGEX is ^Hausdorff distance = *([-0-9.]*) 227: -- LOWER_THRESH is 26.31 227: -- UPPER_THRESH is 26.32 227: -- PARSED VALUE=|Hausdorff distance = 26.315790| 227: -- PARSED_VALUE=|26.315790| 227: Not an error 228: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt 228: -- REGEX is ^Avg average Hausdorff distance = *([-0-9.]*) 228: -- LOWER_THRESH is 3.40 228: -- UPPER_THRESH is 3.41 228: -- PARSED VALUE=|Avg average Hausdorff distance = 3.406955| 228: -- PARSED_VALUE=|3.406955| 228: Not an error 229: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt 229: -- REGEX is ^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*) 229: -- LOWER_THRESH is 7.11 229: -- UPPER_THRESH is 7.12 229: -- PARSED VALUE=|Avg average Hausdorff distance (boundary) = 7.115030| 229: -- PARSED_VALUE=|7.115030| 229: Not an error 230: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt 230: -- REGEX is ^Max average Hausdorff distance \(boundary\) = *([-0-9.]*) 230: -- LOWER_THRESH is 8.53 230: -- UPPER_THRESH is 8.54 230: -- PARSED VALUE=|Max average Hausdorff distance (boundary) = 8.534851| 230: -- PARSED_VALUE=|8.534851| 230: Not an error 231: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-c.stdout.txt 231: -- REGEX is ^Percent .* \(boundary\) = *([-0-9.]*) 231: -- LOWER_THRESH is 26.31 231: -- UPPER_THRESH is 26.32 231: -- PARSED VALUE=|Percent (0.95) Hausdorff distance (boundary) = 26.315790| 231: -- PARSED_VALUE=|26.315790| 231: Not an error 233: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt 233: -- REGEX is ^Hausdorff distance = *([-0-9.]*) 233: -- LOWER_THRESH is 45.575 233: -- UPPER_THRESH is 45.585 233: -- PARSED VALUE=|Hausdorff distance = 45.580288| 233: -- PARSED_VALUE=|45.580288| 233: Not an error 234: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt 234: -- REGEX is ^Avg average Hausdorff distance = *([-0-9.]*) 234: -- LOWER_THRESH is 7.07 234: -- UPPER_THRESH is 7.08 234: -- PARSED VALUE=|Avg average Hausdorff distance = 7.072703| 234: -- PARSED_VALUE=|7.072703| 234: Not an error 235: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt 235: -- REGEX is ^Avg average Hausdorff distance \(boundary\) = *([-0-9.]*) 235: -- LOWER_THRESH is 14.89 235: -- UPPER_THRESH is 14.90 235: -- PARSED VALUE=|Avg average Hausdorff distance (boundary) = 14.894061| 235: -- PARSED_VALUE=|14.894061| 235: Not an error 402/578 Test #201: plm-convert-dicom-donut-a-check ....... Passed 0.18 sec 403/578 Test #204: plm-convert-dicom-donut-b-check ....... Passed 0.16 sec 404/578 Test #208: plm-convert-cxt-check ................. Passed 0.14 sec 405/578 Test #212: plm-convert-dose-scale-check .......... Passed 0.14 sec 406/578 Test #215: plm-crop-a-check-1 .................... Passed 0.14 sec 407/578 Test #218: plm-crop-b-check-1 .................... Passed 0.13 sec 408/578 Test #221: plm-crop-c-check-1 .................... Passed 0.13 sec 409/578 Test #223: plm-dice-a-check-1 .................... Passed 0.12 sec 410/578 Test #225: plm-dice-b-check-1 .................... Passed 0.12 sec 411/578 Test #227: plm-dice-c-check-1 .................... Passed 0.12 sec 412/578 Test #228: plm-dice-c-check-2 .................... Passed 0.11 sec 413/578 Test #229: plm-dice-c-check-3 .................... Passed 0.11 sec 414/578 Test #230: plm-dice-c-check-4 .................... Passed 0.10 sec 415/578 Test #231: plm-dice-c-check-5 .................... Passed 0.09 sec 416/578 Test #233: plm-dice-d-check-1 .................... Passed 0.08 sec 417/578 Test #234: plm-dice-d-check-2 .................... Passed 0.07 sec 418/578 Test #235: plm-dice-d-check-3 .................... Passed 0.07 sec test 255 Start 255: plm-dvh-c-check-2 255: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv" "-DREGEX=^15.5,([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.001" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 255: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 255: Test timeout computed to be: 1500 test 258 Start 258: plm-fill-a-check 258: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-0.1" "-DUPPER_THRESH=+0.1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 258: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 258: Test timeout computed to be: 1500 test 261 Start 261: plm-mask-a-check 261: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-1000.1" "-DUPPER_THRESH=-999.9" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 261: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 261: Test timeout computed to be: 1500 test 264 Start 264: plm-gamma-a-check 264: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.023" "-DUPPER_THRESH=0.024" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 264: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 264: Test timeout computed to be: 1500 test 267 Start 267: plm-gamma-b-check 267: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.245" "-DUPPER_THRESH=0.255" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 267: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 267: Test timeout computed to be: 1500 test 269 Start 269: plm-gamma-c-check 269: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.stdout.txt" "-DREGEX=Pass rate = *([-0-9.]*)" "-DLOWER_THRESH=90.6" "-DUPPER_THRESH=90.8" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 269: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 269: Test timeout computed to be: 1500 test 271 Start 271: plm-gamma-d-check 271: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.stdout.txt" "-DREGEX=Pass rate = *([-0-9.]*)" "-DLOWER_THRESH=89.9" "-DUPPER_THRESH=90.1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 271: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 271: Test timeout computed to be: 1500 test 274 Start 274: plm-maximum-a-check 274: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 274: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 274: Test timeout computed to be: 1500 test 277 Start 277: plm-multiply-a-check 277: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 277: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 277: Test timeout computed to be: 1500 test 280 Start 280: plm-multiply-vf-a-check 280: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=100.000" "-DUPPER_THRESH=100.000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 280: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 280: Test timeout computed to be: 1500 test 281 Start 281: plm-usage 281: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-usage" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 281: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 281: Test timeout computed to be: 1500 test 284 Start 284: plm-reg-align-center-check 284: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-stats.stdout.txt" "-DREGEX=MAE *([-0-9.]*)" "-DLOWER_THRESH=-0.005" "-DUPPER_THRESH=0.005" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 284: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 284: Test timeout computed to be: 1500 test 287 Start 287: plm-reg-itk-translation-check 287: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-677.6" "-DUPPER_THRESH=-677.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 287: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 287: Test timeout computed to be: 1500 test 290 Start 290: plm-reg-itk-rigid-a-check-1 290: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-939.3" "-DUPPER_THRESH=-939.1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 290: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 290: Test timeout computed to be: 1500 test 292 Start 292: plm-reg-itk-rigid-a-check-2 292: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-939.3" "-DUPPER_THRESH=-939.1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 292: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 292: Test timeout computed to be: 1500 test 295 Start 295: plm-reg-itk-similarity-check-1 295: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-981.3" "-DUPPER_THRESH=-981.1" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 295: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 295: Test timeout computed to be: 1500 test 297 Start 297: plm-reg-itk-similarity-check-2 297: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-940.8" "-DUPPER_THRESH=-940.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 297: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 297: Test timeout computed to be: 1500 419/578 Test #129: landmark-warp-d ....................... Passed 0.44 sec 375: RETVAL: 0 375: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 375: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha 375: Launching registration worker thread 375: Inside registration worker thread 375: Doing registration stage 375: [1] xf_in->m_type = 0, xf_out->m_type = 0 375: RESAMPLE 1 1: (1 1 1), (1 1 1) 375: RESAMPLE 1 1: (1 1 1), (1 1 1) 375: volume_calc_grad complete. 375: bspline_xform_initialize 375: Warning: vox_per_rgn was less than 4. 375: Warning: vox_per_rgn was less than 4. 375: Warning: vox_per_rgn was less than 4. 375: rdims = (10,10,10) 375: vox_per_rgn = (4,4,4) 375: cdims = (13 13 13) 375: Algorithm flavor = g 375: Threading = 0 375: Regularization: flavor = a lambda = 1.000000 375: >> Checking JH allocation 375: BSPLINE PARMS 375: max_its = 5 375: max_feval = 5 375: BSPLINE XFORM HEADER 375: vox_per_rgn = 4 4 4 375: roi_offset = 0 0 0 375: roi_dim = 38 38 38 375: img_dc = 1 0 0 0 1 0 0 0 1 375: BST METRICS 375: MET 110100 MSE 1.000000 375: Setting nmax, mmax = 6591 83 375: >>> START 375: This problem is unconstrained. 375: [ 0, 0] SCORE 5540.166 NV 54872 GM 0.000 GN 28.2 [ 1.080 s ] 375: MSE 5540.166 RM 0.000 [ 0.068 | 1.012 ] 375: CMIN 0.00 CAVG 0.00 CMAX 0.00 375: LSD 0.00 375: [ 0, 1] SCORE 5484.185 NV 54872 GM 0.045 GN 27.7 [ 0.720 s ] 375: MSE 5484.124 RM 0.061 [ 0.048 | 0.672 ] 375: CMIN -0.16 CAVG -0.00 CMAX 0.22 375: LSD 1.00 375: [ 0, 2] SCORE 5267.761 NV 54872 GM 0.224 GN 25.8 [ 0.877 s ] 375: MSE 5266.236 RM 1.525 [ 0.043 | 0.833 ] 375: CMIN -0.81 CAVG 0.00 CMAX 1.12 375: LSD 5.00 375: [ 0, 3] SCORE 4511.430 NV 54872 GM 0.928 GN 18.4 [ 0.423 s ] 375: MSE 4484.536 RM 26.894 [ 0.051 | 0.372 ] 375: CMIN -3.39 CAVG 0.00 CMAX 4.70 375: LSD 21.00 375: [ 1, 4] SCORE 3229.400 NV 54872 GM 1.898 GN 2.39 [ 0.809 s ] 375: MSE 3018.981 RM 210.419 [ 0.056 | 0.753 ] 375: CMIN -9.73 CAVG -0.00 CMAX 13.18 375: LSD 40.25 375: [ 2, 5] SCORE 3185.099 NV 54872 GM 4.098 GN 2.08 [ 0.716 s ] 375: MSE 2976.101 RM 208.998 [ 0.040 | 0.676 ] 375: CMIN -9.60 CAVG -0.00 CMAX 13.44 375: LSD 5.50 375: [2] xf_out->m_type = 9, xf_in->m_type = 0 375: ** Registration worker thread finished. 375: Writing transformation ... 375: Warping... 375: Running: plm_warp_native 375: Converting input image... 375: Converting xform... 375: bspline_xform_initialize 375: rdims = (10,10,10) 375: vox_per_rgn = (4,4,4) 375: cdims = (13 13 13) 375: Creating output vf... 375: Creating output volume... 375: Running native warper... 375: bspline_warp complete. 375: Back convert to original type... 375: > Convert vf to itk 375: > Conversion complete. 375: plm_warp_native is complete. 375: Saving image... 375: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-img.mha 375: Saving vf... 375: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-vf.mha 375: Load: 0.084064 375: Run: 4.85569 375: Save: 0.04706 375: Total: 4.98681 375: Finished! 375: 375: STDERR: 375: Not an error 420/578 Test #375: plm-bsp-regularize-numeric ............ Passed 5.40 sec 236: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt 236: -- REGEX is ^Max average Hausdorff distance \(boundary\) = *([-0-9.]*) 236: -- LOWER_THRESH is 18.38 236: -- UPPER_THRESH is 18.39 236: -- PARSED VALUE=|Max average Hausdorff distance (boundary) = 18.384613| 236: -- PARSED_VALUE=|18.384613| 236: Not an error 421/578 Test #236: plm-dice-d-check-4 .................... Passed 0.14 sec 237: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-d.stdout.txt 237: -- REGEX is ^Percent .* \(boundary\) = *([-0-9.]*) 237: -- LOWER_THRESH is 32.89 237: -- UPPER_THRESH is 32.90 237: -- PARSED VALUE=|Percent (0.95) Hausdorff distance (boundary) = 32.894737| 237: -- PARSED_VALUE=|32.894737| 237: Not an error 422/578 Test #237: plm-dice-d-check-5 .................... Passed 0.13 sec 240: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-e.stdout.txt 240: -- REGEX is ^Hausdorff distance = *([-0-9.]*) 240: -- LOWER_THRESH is 4 240: -- UPPER_THRESH is 4 240: -- PARSED VALUE=|Hausdorff distance = 4.000000| 240: -- PARSED_VALUE=|4.000000| 240: Not an error 423/578 Test #240: plm-dice-e-check-2 .................... Passed 0.12 sec 239: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-e.stdout.txt 239: -- REGEX is ^DICE: *([-0-9.]*) 239: -- LOWER_THRESH is 0.96550 239: -- UPPER_THRESH is 0.96554 239: -- PARSED VALUE=|DICE: 0.965517| 239: -- PARSED_VALUE=|0.965517| 239: Not an error 424/578 Test #239: plm-dice-e-check-1 .................... Passed 0.13 sec 196: RETVAL: 1 196: STDOUT: Could not open input file /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/non-existant-directory/ for read 196: 196: STDERR: 196: Not an error 425/578 Test #196: plm-convert-dicom-d ................... Passed 0.27 sec 242: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt 242: -- REGEX is ^DICE: *([-0-9.]*) 242: -- LOWER_THRESH is 1 242: -- UPPER_THRESH is 1 242: -- PARSED VALUE=|DICE: 1.000000| 242: -- PARSED_VALUE=|1.000000| 242: Not an error 426/578 Test #242: plm-dice-f-check-1 .................... Passed 0.12 sec 243: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dice-f.stdout.txt 243: -- REGEX is ^Hausdorff distance = *([-0-9.]*) 243: -- LOWER_THRESH is 0 243: -- UPPER_THRESH is 0 243: -- PARSED VALUE=|Hausdorff distance = 0.000000| 243: -- PARSED_VALUE=|0.000000| 243: Not an error 427/578 Test #243: plm-dice-f-check-2 .................... Passed 0.12 sec 244: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 244: PARMS is dmap;--algorithm;maurer;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-a.mha 244: EXPECTED_ERRNO is 246: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 246: PARMS is dmap;--algorithm;song_maurer;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-4.mha;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-c.mha 246: EXPECTED_ERRNO is 248: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv 248: -- REGEX is ^15,([-0-9.]*), 248: -- LOWER_THRESH is 0.999 248: -- UPPER_THRESH is 1.0 248: -- PARSED VALUE=|15,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0| 248: -- PARSED_VALUE=|1| 248: Not an error 428/578 Test #248: plm-dvh-a-check-1 ..................... Passed 0.10 sec 249: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-a.csv 249: -- REGEX is ^15.5,([-0-9.]*), 249: -- LOWER_THRESH is 0.0 249: -- UPPER_THRESH is 0.001 249: -- PARSED VALUE=|15.5,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0| 249: -- PARSED_VALUE=|0| 249: Not an error test 376 Start 376: plm-bsp-regularize-numeric-stats 376: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-regularize-numeric-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-vf.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 376: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 376: Test timeout computed to be: 1500 test 300 Start 300: plm-reg-itk-bspline-check-1 300: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-764.0" "-DUPPER_THRESH=-763.6" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 300: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 300: Test timeout computed to be: 1500 test 302 Start 302: plm-reg-itk-demons-check-1 302: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.stdout.txt" "-DREGEX=VF_AVG +[^ ] +([-0-9.]*)" "-DLOWER_THRESH=31.85" "-DUPPER_THRESH=34.95" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 302: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 302: Test timeout computed to be: 1500 test 304 Start 304: plm-reg-itk-demons-check-2 304: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-755.3" "-DUPPER_THRESH=-754.6" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 304: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 304: Test timeout computed to be: 1500 test 306 Start 306: plm-reg-itk-demons-diff-check-1 306: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff.stdout.txt" "-DREGEX=VF_AVG +[^ ] +([-0-9.]*)" "-DLOWER_THRESH=31.2" "-DUPPER_THRESH=31.3" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 306: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 306: Test timeout computed to be: 1500 test 308 Start 308: plm-reg-itk-demons-logd-check-1 308: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.stdout.txt" "-DREGEX=VF_AVG +[^ ] +([-0-9.]*)" "-DLOWER_THRESH=32.65" "-DUPPER_THRESH=32.75" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 308: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 308: Test timeout computed to be: 1500 test 310 Start 310: plm-reg-itk-demons-sym-logd-check-1 310: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.stdout.txt" "-DREGEX=VF_AVG +[^ ] +([-0-9.]*)" "-DLOWER_THRESH=31.85" "-DUPPER_THRESH=35.95" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 310: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 310: Test timeout computed to be: 1500 test 313 Start 313: plm-bsp-mse-c-check 313: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 313: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 313: Test timeout computed to be: 1500 test 316 Start 316: plm-bsp-mse-g-check 316: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 316: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 316: Test timeout computed to be: 1500 test 319 Start 319: plm-bsp-mse-h-check 319: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 319: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 319: Test timeout computed to be: 1500 251: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv 251: -- REGEX is ^15,([-0-9.]*) 251: -- LOWER_THRESH is 0.999 251: -- UPPER_THRESH is 1.0 251: -- PARSED VALUE=|15,1| 251: -- PARSED_VALUE=|1| 251: Not an error 252: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-b.csv 252: -- REGEX is ^15.5,([-0-9.]*) 252: -- LOWER_THRESH is 0.0 252: -- UPPER_THRESH is 0.001 252: -- PARSED VALUE=|15.5,0| 252: -- PARSED_VALUE=|0| 252: Not an error 254: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv 254: -- REGEX is ^15,([-0-9.]*) 254: -- LOWER_THRESH is 0.780 254: -- UPPER_THRESH is 0.783 254: -- PARSED VALUE=|15,0.781709| 254: -- PARSED_VALUE=|0.781709| 254: Not an error 198: RETVAL: 0 198: STDOUT: Loading RDD 198: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916104RTDOSE 198: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916105RTSTRUCT 198: Found DCM_ReferencedFrameOfReferenceSequence! 198: Found DCM_RTReferencedStudySequence! 198: Trying to load rt dose. 198: Load: DoseGridScaling = 0.000000 198: RTDOSE: dim = 38 38 38 198: ipp = -243.421005 -243.421005 -243.421005 198: spc = 13.157900 13.157900 13.157900 198: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 198: Bits_alloc: 32 198: Bits_stored: 32 198: High_bit: 31 198: Pixel_rep: 0 198: rc = 1, length = 109744, npix = 54872 198: Trying to load rt structure set. 198: Adding structure (1), Foreground 198: Structure 1 has color 255\0\0 198: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916104RTDOSE 198: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916105RTSTRUCT 198: Found DCM_ReferencedFrameOfReferenceSequence! 198: Found DCM_RTReferencedStudySequence! 198: Trying to load rt dose. 198: Load: DoseGridScaling = 0.000000 198: RTDOSE: dim = 38 38 38 198: ipp = -243.421005 -243.421005 -243.421005 198: spc = 13.157900 13.157900 13.157900 198: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 198: Bits_alloc: 32 198: Bits_stored: 32 198: High_bit: 31 198: Pixel_rep: 0 198: rc = 1, length = 109744, npix = 54872 198: Trying to load rt structure set. 198: Adding structure (1), Foreground 198: Structure 1 has color 255\0\0 198: Loading RDD complete 198: date_string: 20260215 198: description_string: 198: referring_physician_name_string: 198: accession_number_string: 198: time_string: 221810 198: study_id_string: 198: position_reference_indicator_string: 198: ct_series_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916103 198: dose_instance_uid: 198: dose_series_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.1167576.1771237096.884818 198: plan_instance_uid: 198: rtstruct_instance_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916101 198: rtstruct_series_uid: 1.2.826.0.1.3680043.8.274.1.1.8323329.1167576.1771237096.884819 198: study_metadata: 198: Metadata 198: 0008,0052 | 1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237090.916084 198: 0010,0010 | RECT^SYNTH 198: 0010,0020 | RECT-SYNTH 198: 0010,0040 | O 198: 0018,5100 | HFS 198: 0020,000d | 1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237090.916083 198: 0020,0010 | 10001 198: image_metadata: 198: Metadata 198: 0008,0012 | 20260215 198: 0008,0013 | 221810 198: 0008,0060 | CT 198: 0008,103e | rect-2 198: rtstruct_metadata: 198: Metadata 198: dose_metadata: 198: Metadata 198: rtplan_metadata: 198: Metadata 198: sro_metadata: 198: Metadata 198: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146089.1771237091.866239RTSTRUCT 198: Found DCM_ReferencedFrameOfReferenceSequence! 198: Found DCM_RTReferencedStudySequence! 198: Trying to load rt structure set. 198: Adding structure (1), Foreground 198: Structure 1 has color 255\0\0 198: Setting PIH from RDD 198: PIH is: 198: Origin = -243.4211 -243.4211 -243.4211 198: Size = 38 38 38 198: Spacing = 13.1579 13.1579 13.1579 198: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 198: Rt_study_warp: Convert ss_img to cxt. 198: Rt_study_warp: Apply dicom_dir. 198: Rt_study_warp: Set geometry from PIH. 198: Rt_study_warp: Set rasterization geometry. 198: rast_dim = 512 512 7 198: rast_offset = -55.2632 -55.2632 -46.0526 198: rast_spacing = 0.215872 0.215872 13.1579 198: Rt_study_warp: warp and save ss. 198: Warp_and_save_ss: save_ss_img 198: Rt_study_warp: Save dicom. 198: Keyholizing structure 0. 198: Finished! 198: 198: STDERR: 198: Not an error 197: RETVAL: 1 197: STDOUT: Sorry, could not load input as any known type. 197: 197: STDERR: 197: Not an error 572: RETVAL: 0 572: STDOUT: MIN 0.000000 AVE 0.266122 MAX 100.000000 NONZERO 932 NUMVOX 216000 572: 572: STDERR: 572: Not an error 255: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dvh-c.csv 255: -- REGEX is ^15.5,([-0-9.]*) 255: -- LOWER_THRESH is 0.0 255: -- UPPER_THRESH is 0.001 255: -- PARSED VALUE=|15.5,0| 255: -- PARSED_VALUE=|0| 255: Not an error 258: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-fill-a-stats.stdout.txt 258: -- REGEX is AVE *([-0-9.]*) 258: -- LOWER_THRESH is -0.1 258: -- UPPER_THRESH is +0.1 258: -- PARSED VALUE=|MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872| 258: -- PARSED_VALUE=|0.000000| 258: Not an error 261: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-mask-a-stats.stdout.txt 261: -- REGEX is AVE *([-0-9.]*) 261: -- LOWER_THRESH is -1000.1 261: -- UPPER_THRESH is -999.9 261: -- PARSED VALUE=|MIN -1000.000000 AVE -1000.000000 MAX -1000.000000 NONZERO 54872 NUMVOX 54872| 261: -- PARSED_VALUE=|-1000.000000| 261: Not an error 264: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-a-stats.stdout.txt 264: -- REGEX is AVE *([-0-9.]*) 264: -- LOWER_THRESH is 0.023 264: -- UPPER_THRESH is 0.024 264: -- PARSED VALUE=|MIN 0.000000 AVE 0.023500 MAX 0.666667 NONZERO 400 NUMVOX 8000| 264: -- PARSED_VALUE=|0.023500| 264: Not an error 267: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-b-stats.stdout.txt 267: -- REGEX is AVE *([-0-9.]*) 267: -- LOWER_THRESH is 0.245 267: -- UPPER_THRESH is 0.255 267: -- PARSED VALUE=|MIN 0.000000 AVE 0.250000 MAX 2.000000 NONZERO 1000 NUMVOX 8000| 267: -- PARSED_VALUE=|0.250000| 267: Not an error 269: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-c.stdout.txt 269: -- REGEX is Pass rate = *([-0-9.]*) 269: -- LOWER_THRESH is 90.6 269: -- UPPER_THRESH is 90.8 269: -- PARSED VALUE=|Pass rate = 90.719998 %| 269: -- PARSED_VALUE=|90.719998| 269: Not an error 271: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-gamma-d.stdout.txt 271: -- REGEX is Pass rate = *([-0-9.]*) 271: -- LOWER_THRESH is 89.9 271: -- UPPER_THRESH is 90.1 271: -- PARSED VALUE=|Pass rate = 89.999998 %| 271: -- PARSED_VALUE=|89.999998| 271: Not an error 274: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-maximum-a-stats.stdout.txt 274: -- REGEX is AVE *([-0-9.]*) 274: -- LOWER_THRESH is 0.0 274: -- UPPER_THRESH is 0.0 274: -- PARSED VALUE=|MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 54872| 274: -- PARSED_VALUE=|0.000000| 274: Not an error 277: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-a-stats.stdout.txt 277: -- REGEX is AVE *([-0-9.]*) 277: -- LOWER_THRESH is 0.0 277: -- UPPER_THRESH is 0.0 277: -- PARSED VALUE=|MIN -0.000000 AVE 0.000000 MAX -0.000000 NONZERO 0 NUMVOX 54872| 277: -- PARSED_VALUE=|0.000000| 277: Not an error 280: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-multiply-vf-a-stats.stdout.txt 280: -- REGEX is Mean: *([-0-9.]*) 280: -- LOWER_THRESH is 100.000 280: -- UPPER_THRESH is 100.000 280: -- PARSED VALUE=|Mean: 100.000 100.000 100.000| 280: -- PARSED_VALUE=|100.000| 280: Not an error 281: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 281: PARMS is 281: EXPECTED_ERRNO is 284: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-align-center-stats.stdout.txt 284: -- REGEX is MAE *([-0-9.]*) 284: -- LOWER_THRESH is -0.005 284: -- UPPER_THRESH is 0.005 284: -- PARSED VALUE=|MAE 0.000002 MSE 0.000000| 284: -- PARSED_VALUE=|0.000002| 284: Not an error 287: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-translation-stats.stdout.txt 287: -- REGEX is AVE *([-0-9.]*) 287: -- LOWER_THRESH is -677.6 287: -- UPPER_THRESH is -677.5 287: -- PARSED VALUE=|MIN -999.914246 AVE -677.557922 MAX 0.000000 NONZERO 43320 NUMVOX 54872| 287: -- PARSED_VALUE=|-677.557922| 287: Not an error 290: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-1.stdout.txt 290: -- REGEX is AVE *([-0-9.]*) 290: -- LOWER_THRESH is -939.3 290: -- UPPER_THRESH is -939.1 290: -- PARSED VALUE=|MIN -1000.000000 AVE -939.203979 MAX 0.000000 NONZERO 51690 NUMVOX 54872| 290: -- PARSED_VALUE=|-939.203979| 290: Not an error 429/578 Test #197: plm-convert-dicom-e ................... Passed 0.31 sec 430/578 Test #198: plm-convert-dicom-f ................... Passed 0.30 sec 431/578 Test #249: plm-dvh-a-check-2 ..................... Passed 0.14 sec 432/578 Test #251: plm-dvh-b-check-1 ..................... Passed 0.14 sec 433/578 Test #252: plm-dvh-b-check-2 ..................... Passed 0.13 sec 434/578 Test #254: plm-dvh-c-check-1 ..................... Passed 0.13 sec 435/578 Test #255: plm-dvh-c-check-2 ..................... Passed 0.12 sec 436/578 Test #258: plm-fill-a-check ...................... Passed 0.11 sec 437/578 Test #261: plm-mask-a-check ...................... Passed 0.11 sec 438/578 Test #264: plm-gamma-a-check ..................... Passed 0.10 sec 439/578 Test #267: plm-gamma-b-check ..................... Passed 0.10 sec 440/578 Test #269: plm-gamma-c-check ..................... Passed 0.10 sec 441/578 Test #271: plm-gamma-d-check ..................... Passed 0.10 sec 442/578 Test #274: plm-maximum-a-check ................... Passed 0.09 sec 443/578 Test #277: plm-multiply-a-check .................. Passed 0.08 sec 444/578 Test #280: plm-multiply-vf-a-check ............... Passed 0.08 sec 445/578 Test #284: plm-reg-align-center-check ............ Passed 0.07 sec 446/578 Test #287: plm-reg-itk-translation-check ......... Passed 0.07 sec 447/578 Test #290: plm-reg-itk-rigid-a-check-1 ........... Passed 0.07 sec test 322 Start 322: plm-bsp-mse-i-check 322: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 322: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 322: Test timeout computed to be: 1500 test 325 Start 325: plm-bsp-mse-k-check 325: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 325: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 325: Test timeout computed to be: 1500 test 328 Start 328: plm-bsp-mse-l-check 328: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 328: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 328: Test timeout computed to be: 1500 test 330 Start 330: plm-bsp-mse-o-stats 330: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-o-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 330: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 330: Test timeout computed to be: 1500 test 332 Start 332: plm-bsp-mse-p-stats 332: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-p-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 332: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 332: Test timeout computed to be: 1500 test 334 Start 334: plm-bsp-mse-q-stats 334: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-q-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 334: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 334: Test timeout computed to be: 1500 test 336 Start 336: plm-bsp-mse-r-stats 336: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-mse-r-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 336: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 336: Test timeout computed to be: 1500 test 339 Start 339: plm-bsp-mi-c-check 339: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-114.0" "-DUPPER_THRESH=-113.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 339: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 339: Test timeout computed to be: 1500 test 342 Start 342: plm-bsp-mi-c-2-check 342: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-129.5" "-DUPPER_THRESH=-128.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 342: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 342: Test timeout computed to be: 1500 test 345 Start 345: plm-bsp-mi-k-check 345: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-114.0" "-DUPPER_THRESH=-113.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 345: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 345: Test timeout computed to be: 1500 test 348 Start 348: plm-bsp-gm-k-check 348: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-122.5" "-DUPPER_THRESH=-121.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 348: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 348: Test timeout computed to be: 1500 test 350 Start 350: plm-bsp-sm-multi-a-stats 350: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-sm-multi-a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 350: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 350: Test timeout computed to be: 1500 test 353 Start 353: plm-bsp-openmp-check 353: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-746.0" "-DUPPER_THRESH=-744.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 353: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 353: Test timeout computed to be: 1500 test 355 Start 355: plm-bsp-resume-stats 355: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-resume-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume-img.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 355: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 355: Test timeout computed to be: 1500 test 357 Start 357: plm-bsp-logfile-check 357: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile-logfile.txt" "-DREGEX=\[.*, 5] MSE *([-0-9.]*)" "-DLOWER_THRESH=281.5" "-DUPPER_THRESH=282.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 357: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 357: Test timeout computed to be: 1500 test 360 Start 360: plm-bsp-ushort-check 360: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=106.6" "-DUPPER_THRESH=107.6" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 360: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 360: Test timeout computed to be: 1500 test 363 Start 363: plm-bsp-double-check 363: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=107.6" "-DUPPER_THRESH=108.6" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 363: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 363: Test timeout computed to be: 1500 test 364 Start 364: plm-bsp-itk-output 364: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-itk-output" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-bsp-itk-output.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 364: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 364: Test timeout computed to be: 1500 test 367 Start 367: plm-bsp-char-output-check 367: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output-stats.stdout.txt" "-DREGEX=MIN *([-0-9.]*)" "-DLOWER_THRESH=-128.1" "-DUPPER_THRESH=-127.9" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 367: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 367: Test timeout computed to be: 1500 448/578 Test #572: proton-dose-6a-stats .................. Passed 0.41 sec 292: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-rigid-a-stats-2.stdout.txt 292: -- REGEX is AVE *([-0-9.]*) 292: -- LOWER_THRESH is -939.3 292: -- UPPER_THRESH is -939.1 292: -- PARSED VALUE=|MIN -1000.000000 AVE -939.203979 MAX 0.000000 NONZERO 51690 NUMVOX 54872| 292: -- PARSED_VALUE=|-939.203979| 292: Not an error 449/578 Test #292: plm-reg-itk-rigid-a-check-2 ........... Passed 0.14 sec 295: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-1.stdout.txt 295: -- REGEX is AVE *([-0-9.]*) 295: -- LOWER_THRESH is -981.3 295: -- UPPER_THRESH is -981.1 295: -- PARSED VALUE=|MIN -1000.000000 AVE -981.187012 MAX 0.000000 NONZERO 54152 NUMVOX 54872| 295: -- PARSED_VALUE=|-981.187012| 295: Not an error 450/578 Test #295: plm-reg-itk-similarity-check-1 ........ Passed 0.14 sec 297: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-similarity-stats-2.stdout.txt 297: -- REGEX is AVE *([-0-9.]*) 297: -- LOWER_THRESH is -940.8 297: -- UPPER_THRESH is -940.5 297: -- PARSED VALUE=|MIN -1000.000000 AVE -940.684265 MAX 0.000000 NONZERO 52716 NUMVOX 54872| 297: -- PARSED_VALUE=|-940.684265| 297: Not an error 451/578 Test #297: plm-reg-itk-similarity-check-2 ........ Passed 0.13 sec 376: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 376: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-vf.mha 376: EXPECTED_ERRNO is 300: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-bspline-stats-1.stdout.txt 300: -- REGEX is AVE *([-0-9.]*) 300: -- LOWER_THRESH is -764.0 300: -- UPPER_THRESH is -763.6 300: -- PARSED VALUE=|MIN -999.992249 AVE -763.817810 MAX 0.000000 NONZERO 48346 NUMVOX 54872| 300: -- PARSED_VALUE=|-763.817810| 300: Not an error 452/578 Test #300: plm-reg-itk-bspline-check-1 ........... Passed 0.12 sec 302: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons.stdout.txt 302: -- REGEX is VF_AVG +[^ ] +([-0-9.]*) 302: -- LOWER_THRESH is 31.85 302: -- UPPER_THRESH is 34.95 302: -- PARSED VALUE=|VF_MAX = 97.6986 VF_AVG = 31.9237| 302: -- PARSED_VALUE=|31.9237| 302: Not an error 453/578 Test #302: plm-reg-itk-demons-check-1 ............ Passed 0.12 sec 304: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-stats-2.stdout.txt 304: -- REGEX is AVE *([-0-9.]*) 304: -- LOWER_THRESH is -755.3 304: -- UPPER_THRESH is -754.6 304: -- PARSED VALUE=|MIN -999.914856 AVE -754.915161 MAX 0.000000 NONZERO 47950 NUMVOX 54872| 304: -- PARSED_VALUE=|-754.915161| 304: Not an error 454/578 Test #304: plm-reg-itk-demons-check-2 ............ Passed 0.11 sec 306: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-diff.stdout.txt 306: -- REGEX is VF_AVG +[^ ] +([-0-9.]*) 306: -- LOWER_THRESH is 31.2 306: -- UPPER_THRESH is 31.3 306: -- PARSED VALUE=|VF_MAX = 102.433 VF_AVG = 31.2783| 306: -- PARSED_VALUE=|31.2783| 306: Not an error 455/578 Test #306: plm-reg-itk-demons-diff-check-1 ....... Passed 0.11 sec 308: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-logd.stdout.txt 308: -- REGEX is VF_AVG +[^ ] +([-0-9.]*) 308: -- LOWER_THRESH is 32.65 308: -- UPPER_THRESH is 32.75 308: -- PARSED VALUE=|VF_MAX = 112.668 VF_AVG = 32.7138| 308: -- PARSED_VALUE=|32.7138| 308: Not an error 456/578 Test #308: plm-reg-itk-demons-logd-check-1 ....... Passed 0.11 sec 310: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-itk-demons-sym-logd.stdout.txt 310: -- REGEX is VF_AVG +[^ ] +([-0-9.]*) 310: -- LOWER_THRESH is 31.85 310: -- UPPER_THRESH is 35.95 310: -- PARSED VALUE=|VF_MAX = 109.365 VF_AVG = 31.9237| 310: -- PARSED_VALUE=|31.9237| 310: Not an error 457/578 Test #310: plm-reg-itk-demons-sym-logd-check-1 ... Passed 0.10 sec 313: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-c-stats.stdout.txt 313: -- REGEX is AVE *([-0-9.]*) 313: -- LOWER_THRESH is -746.0 313: -- UPPER_THRESH is -744.5 313: -- PARSED VALUE=|MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 313: -- PARSED_VALUE=|-745.347717| 313: Not an error 316: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-g-stats.stdout.txt 316: -- REGEX is AVE *([-0-9.]*) 316: -- LOWER_THRESH is -746.0 316: -- UPPER_THRESH is -744.5 316: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 316: -- PARSED_VALUE=|-745.347717| 316: Not an error test 371 Start 371: plm-bsp-regularize-none-check 371: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-stats.stdout.txt" "-DREGEX=MINJAC *([-0-9.]*)" "-DLOWER_THRESH=0.31" "-DUPPER_THRESH=0.32" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 371: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 371: Test timeout computed to be: 1500 test 374 Start 374: plm-bsp-regularize-analytic-check 374: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-stats.stdout.txt" "-DREGEX=MINJAC *([-0-9.]*)" "-DLOWER_THRESH=0.415" "-DUPPER_THRESH=0.425" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 374: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 374: Test timeout computed to be: 1500 test 378 Start 378: plm-bsp-landmark-a 378: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-bsp-landmark-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 378: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 378: Test timeout computed to be: 1500 test 381 Start 381: plm-bsp-landmark-b-check 381: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-991.5" "-DUPPER_THRESH=-991.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 381: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 381: Test timeout computed to be: 1500 test 384 Start 384: plm-bsp-landmark-c-check 384: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-991.5" "-DUPPER_THRESH=-991.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 384: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 384: Test timeout computed to be: 1500 test 387 Start 387: plm-bsp-landmark-d-check 387: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-991.5" "-DUPPER_THRESH=-991.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 387: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 387: Test timeout computed to be: 1500 test 390 Start 390: plm-bsp-landmark-e-check 390: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-991.5" "-DUPPER_THRESH=-991.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 390: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 390: Test timeout computed to be: 1500 test 393 Start 393: plm-bsp-dcos-a-check 393: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-816" "-DUPPER_THRESH=-815" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 393: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 393: Test timeout computed to be: 1500 test 396 Start 396: plm-bsp-dcos-b-check 396: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-796.8" "-DUPPER_THRESH=-795.8" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 396: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 396: Test timeout computed to be: 1500 test 399 Start 399: plm-bsp-dcos-c-check 399: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-816" "-DUPPER_THRESH=-815" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 399: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 399: Test timeout computed to be: 1500 458/578 Test #313: plm-bsp-mse-c-check ................... Passed 0.14 sec 459/578 Test #316: plm-bsp-mse-g-check ................... Passed 0.14 sec 319: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-h-stats.stdout.txt 319: -- REGEX is AVE *([-0-9.]*) 319: -- LOWER_THRESH is -746.0 319: -- UPPER_THRESH is -744.5 319: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 319: -- PARSED_VALUE=|-745.347717| 319: Not an error 460/578 Test #319: plm-bsp-mse-h-check ................... Passed 0.14 sec 565: RETVAL: 0 565: STDOUT: 565: [PLAN] 565: patient : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha 565: target : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha 565: dose_out : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha 565: debug : 0 565: dose norm : 100 565: 565: [SETTINGS] 565: flavor: a ** 565: homo_approx: n ** 565: ray_step: 1 ** 565: aperture_out: ** 565: proj_dose_out: ** 565: proj_img_out: ** 565: range_comp_out: ** 565: sigma_out: ** 565: wed_out: ** 565: beam_weight: 1 ** 565: 565: [GEOMETRY & APERTURE] 565: source: 0 -2000 0 ** 565: isocenter: 0 0 0 ** 565: vup: 0 0 1 ** 565: offset: 1500 ** 565: ap_center in pixels: 20 20 ** 565: i_res: 41 41 ** 565: spacing: 3.75 3.75 ** 565: source_size: 0 ** 565: ap_file_in: ** 565: rc_file_in: ** 565: smearing: 5 ** 565: 565: [PEAK] 565: E0: P0 565: spread: P0 565: weight: P0 565: 565: Start dose calculation Beam 1 565: Plan_calc::compute_beam_dose(beam) entry -- 565: Setting RVRTS = 1 565: FPD = 347.500001, BPD = 649.116731 565: 41 41 302 565: Setting RVRTS = 1 565: FPD = 347.500001, BPD = 649.116731 565: 41 41 302 565: Setting RVRTS = 1 565: FPD = 347.500001, BPD = 649.116731 565: 41 41 302 565: Priority 5. Target detected. 565: Compute target wepl_min_max... 565: Apply lateral smearing to the target... 565: Smearing = 5.000000, Smearing_ap = 3.750000 565: Strel size = (1,1), (3,3) 565: 0 1 0 565: 1 1 1 565: 0 1 0 565: Apply proximal and distal ... 565: Compute max wed... 565: Compute the aperture... 565: Max wed in the target is 117.554 mm. 565: Min wed in the target is 88.5523 mm. 565: Min and max depths in the PTV (target + margins): 88.5523 mm and 117.554 mm. 565: Min and max energies for treating the PTV: 109 MeV and 130 MeV. 565: 565: 22 Mono-energetic BP used: 565: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 565: Optimization of the particle number map for any mono-energetic slice in progress... 565: Adding peak to sobp (130.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (129.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (128.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (127.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (126.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (125.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (124.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (123.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (122.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (121.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (120.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (119.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (118.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (117.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (116.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (115.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (114.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (113.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (112.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (111.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (110.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Adding peak to sobp (109.000000, 1.000000, 1.000000) [0.010000, 140.000000] 565: Raw dose at the maximum (-15, 15, -10) : 1.01597 A.U. 565: Dose normalized at the maximum to 1 x 100%. 565: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm 565: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha 565: Sigma: 0.000000 seconds 565: Calc: 3.088228 seconds 565: IO: 0.235100 seconds 565: Reformat: 0.000000 seconds 565: Misc: 0.104502 seconds 565: done. 565: 565: Total execution time : 3.464925 seconds. 565: 565: STDERR: 565: Not an error 461/578 Test #565: proton-dose-5a ........................ Passed 4.26 sec 205: RETVAL: 0 205: STDOUT: Trying to load ss_list: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/donut-1-ss-list.txt 205: Setting PIH from M_IMG 205: PIH is: 205: Origin = -25.0000 -25.0000 -25.0000 205: Size = 38 38 38 205: Spacing = 1.3158 1.3158 1.3158 205: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 205: Rt_study_warp: Convert ss_img to cxt. 205: Doing extraction 205: Rt_study_warp: Apply dicom_dir. 205: Rt_study_warp: Set geometry from PIH. 205: Rt_study_warp: Set rasterization geometry. 205: rast_dim = 512 512 14 205: rast_offset = -10.3618 -10.3618 -9.21053 205: rast_spacing = 0.0404759 0.0404759 1.31579 205: Rt_study_warp: warp and save ss. 205: Warp_and_save_ss: save_ss_img 205: Rt_study_warp: Save dicom. 205: Keyholizing structure 0. 205: Finished! 205: 205: STDERR: 205: Not an error 462/578 Test #205: plm-convert-dicom-donut-c ............. Passed 0.40 sec 322: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-i-stats.stdout.txt 322: -- REGEX is AVE *([-0-9.]*) 322: -- LOWER_THRESH is -746.0 322: -- UPPER_THRESH is -744.5 322: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 322: -- PARSED_VALUE=|-745.347717| 322: Not an error 463/578 Test #322: plm-bsp-mse-i-check ................... Passed 0.12 sec 325: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-k-stats.stdout.txt 325: -- REGEX is AVE *([-0-9.]*) 325: -- LOWER_THRESH is -746.0 325: -- UPPER_THRESH is -744.5 325: -- PARSED VALUE=|MIN -999.988647 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 325: -- PARSED_VALUE=|-745.347717| 325: Not an error 464/578 Test #325: plm-bsp-mse-k-check ................... Passed 0.12 sec 328: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-l-stats.stdout.txt 328: -- REGEX is AVE *([-0-9.]*) 328: -- LOWER_THRESH is -746.0 328: -- UPPER_THRESH is -744.5 328: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 328: -- PARSED_VALUE=|-745.347717| 328: Not an error 465/578 Test #328: plm-bsp-mse-l-check ................... Passed 0.12 sec 330: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 330: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-o-img.mha 330: EXPECTED_ERRNO is 332: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 332: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-p-img.mha 332: EXPECTED_ERRNO is 334: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 334: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-q-img.mha 334: EXPECTED_ERRNO is 336: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 336: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mse-r-img.mha 336: EXPECTED_ERRNO is 339: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-stats.stdout.txt 339: -- REGEX is AVE *([-0-9.]*) 339: -- LOWER_THRESH is -114.0 339: -- UPPER_THRESH is -113.0 339: -- PARSED VALUE=|MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872| 339: -- PARSED_VALUE=|-113.473007| 339: Not an error 466/578 Test #339: plm-bsp-mi-c-check .................... Passed 0.10 sec 342: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-c-2-stats.stdout.txt 342: -- REGEX is AVE *([-0-9.]*) 342: -- LOWER_THRESH is -129.5 342: -- UPPER_THRESH is -128.5 342: -- PARSED VALUE=|MIN -991.894104 AVE -128.919357 MAX 0.000000 NONZERO 48385 NUMVOX 54872| 342: -- PARSED_VALUE=|-128.919357| 342: Not an error 467/578 Test #342: plm-bsp-mi-c-2-check .................. Passed 0.10 sec 345: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-mi-k-stats.stdout.txt 345: -- REGEX is AVE *([-0-9.]*) 345: -- LOWER_THRESH is -114.0 345: -- UPPER_THRESH is -113.0 345: -- PARSED VALUE=|MIN -998.614563 AVE -113.473007 MAX -0.004266 NONZERO 54872 NUMVOX 54872| 345: -- PARSED_VALUE=|-113.473007| 345: Not an error 468/578 Test #345: plm-bsp-mi-k-check .................... Passed 0.09 sec 348: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-gm-k-stats.stdout.txt 348: -- REGEX is AVE *([-0-9.]*) 348: -- LOWER_THRESH is -122.5 348: -- UPPER_THRESH is -121.5 348: -- PARSED VALUE=|MIN -997.631409 AVE -121.961853 MAX 0.000000 NONZERO 49452 NUMVOX 54872| 348: -- PARSED_VALUE=|-121.961853| 348: Not an error 469/578 Test #348: plm-bsp-gm-k-check .................... Passed 0.08 sec 350: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 350: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-sm-multi-a-img.mha 350: EXPECTED_ERRNO is 353: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-openmp-stats.stdout.txt 353: -- REGEX is AVE *([-0-9.]*) 353: -- LOWER_THRESH is -746.0 353: -- UPPER_THRESH is -744.5 353: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 353: -- PARSED_VALUE=|-745.347717| 353: Not an error 470/578 Test #353: plm-bsp-openmp-check .................. Passed 0.08 sec 355: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 355: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-resume-img.mha 355: EXPECTED_ERRNO is 357: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-logfile-logfile.txt 357: -- REGEX is \[.*, 5] MSE *([-0-9.]*) 357: -- LOWER_THRESH is 281.5 357: -- UPPER_THRESH is 282.5 357: -- PARSED VALUE=|[ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.026 s ]| 357: -- PARSED_VALUE=|282.038| 357: Not an error 471/578 Test #357: plm-bsp-logfile-check ................. Passed 0.07 sec test 566 Start 566: proton-dose-5a-stats 566: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5a-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 566: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 566: Test timeout computed to be: 1500 test 402 Start 402: plm-bsp-dcos-d-check 402: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-796.8" "-DUPPER_THRESH=-795.8" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 402: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 402: Test timeout computed to be: 1500 test 405 Start 405: plm-bsp-dcos-e-check 405: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-816" "-DUPPER_THRESH=-815" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 405: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 405: Test timeout computed to be: 1500 test 408 Start 408: plm-bsp-dcos-f-check 408: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-796.8" "-DUPPER_THRESH=-795.8" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 408: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 408: Test timeout computed to be: 1500 test 411 Start 411: plm-reg-multi-a-check 411: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-22" "-DUPPER_THRESH=-18" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 411: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 411: Test timeout computed to be: 1500 test 414 Start 414: plm-reg-multi-b-check 414: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-987" "-DUPPER_THRESH=-984" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 414: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 414: Test timeout computed to be: 1500 test 417 Start 417: plm-reg-dv-itk-translation-check 417: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-467.1" "-DUPPER_THRESH=-366.9" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 417: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 417: Test timeout computed to be: 1500 test 418 Start 418: plm-reg-roi-a 418: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-roi-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 418: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 418: Test timeout computed to be: 1500 test 419 Start 419: plm-reg-roi-b 419: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-roi-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 419: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 419: Test timeout computed to be: 1500 test 420 Start 420: plm-reg-roi-c 420: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-roi-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 420: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 420: Test timeout computed to be: 1500 test 421 Start 421: plm-reg-roi-d 421: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-roi-d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-d.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 421: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 421: Test timeout computed to be: 1500 test 422 Start 422: plm-reg-roi-e 422: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-roi-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-e.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 422: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 422: Test timeout computed to be: 1500 test 423 Start 423: plm-reg-stiffness-a 423: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-stiffness-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=register;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 423: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 423: Test timeout computed to be: 1500 test 426 Start 426: plm-reg-process-a-check 426: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-491.0" "-DUPPER_THRESH=-490.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 426: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 426: Test timeout computed to be: 1500 360: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-ushort-stats.stdout.txt 360: -- REGEX is AVE *([-0-9.]*) 360: -- LOWER_THRESH is 106.6 360: -- UPPER_THRESH is 107.6 360: -- PARSED VALUE=|MIN 0.000000 AVE 107.313034 MAX 997.000000 NONZERO 44294 NUMVOX 54872| 360: -- PARSED_VALUE=|107.313034| 360: Not an error 363: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-double-stats.stdout.txt 363: -- REGEX is AVE *([-0-9.]*) 363: -- LOWER_THRESH is 107.6 363: -- UPPER_THRESH is 108.6 363: -- PARSED VALUE=|MIN 0.000000 AVE 108.147682 MAX 998.045227 NONZERO 46833 NUMVOX 54872| 363: -- PARSED_VALUE=|108.147682| 363: Not an error 281: RETVAL: 0 281: STDOUT: plastimatch version 1.9.4 281: Usage: plastimatch command [options] 281: Commands: 281: add adjust average bbox boundary 281: crop compare compose convert dice 281: diff dmap dose drr dvh 281: fdk fill filter gamma header 281: intersect jacobian lm-warp mabs mask 281: maximum ml-convert multiply probe register 281: resample scale segment sift stats 281: synth synth-vf threshold thumbnail union 281: warp wed xf-convert xf-invert 281: 281: For detailed usage of a specific command, type: 281: plastimatch command 281: 281: STDERR: 281: Not an error 364: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 364: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/plm-bsp-itk-output.txt 364: EXPECTED_ERRNO is 367: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-char-output-stats.stdout.txt 367: -- REGEX is MIN *([-0-9.]*) 367: -- LOWER_THRESH is -128.1 367: -- UPPER_THRESH is -127.9 367: -- PARSED VALUE=|MIN -128.000000 AVE -127.132690 MAX 0.000000 NONZERO 54608 NUMVOX 54872| 367: -- PARSED_VALUE=|-128.000000| 367: Not an error 371: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-none-stats.stdout.txt 371: -- REGEX is MINJAC *([-0-9.]*) 371: -- LOWER_THRESH is 0.31 371: -- UPPER_THRESH is 0.32 371: -- PARSED VALUE=|Jacobian: MINJAC 0.315393 MAXJAC 1.06557| 371: -- PARSED_VALUE=|0.315393| 371: Not an error 374: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-analytic-stats.stdout.txt 374: -- REGEX is MINJAC *([-0-9.]*) 374: -- LOWER_THRESH is 0.415 374: -- UPPER_THRESH is 0.425 374: -- PARSED VALUE=|Jacobian: MINJAC 0.419027 MAXJAC 1.04996| 374: -- PARSED_VALUE=|0.419027| 374: Not an error 378: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 378: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a.txt 378: EXPECTED_ERRNO is 381: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-b-stats.stdout.txt 381: -- REGEX is AVE *([-0-9.]*) 381: -- LOWER_THRESH is -991.5 381: -- UPPER_THRESH is -991.0 381: -- PARSED VALUE=|MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872| 381: -- PARSED_VALUE=|-991.355164| 381: Not an error 384: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-c-stats.stdout.txt 384: -- REGEX is AVE *([-0-9.]*) 384: -- LOWER_THRESH is -991.5 384: -- UPPER_THRESH is -991.0 384: -- PARSED VALUE=|MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872| 384: -- PARSED_VALUE=|-991.355164| 384: Not an error 390: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-e-stats.stdout.txt 390: -- REGEX is AVE *([-0-9.]*) 390: -- LOWER_THRESH is -991.5 390: -- UPPER_THRESH is -991.0 390: -- PARSED VALUE=|MIN -1000.000183 AVE -991.396057 MAX 0.000000 NONZERO 54488 NUMVOX 54872| 390: -- PARSED_VALUE=|-991.396057| 390: Not an error 472/578 Test #281: plm-usage ............................. Passed 0.28 sec 473/578 Test #360: plm-bsp-ushort-check .................. Passed 0.14 sec 474/578 Test #363: plm-bsp-double-check .................. Passed 0.14 sec 475/578 Test #367: plm-bsp-char-output-check ............. Passed 0.13 sec 476/578 Test #371: plm-bsp-regularize-none-check ......... Passed 0.12 sec 477/578 Test #374: plm-bsp-regularize-analytic-check ..... Passed 0.11 sec 478/578 Test #381: plm-bsp-landmark-b-check .............. Passed 0.10 sec 479/578 Test #384: plm-bsp-landmark-c-check .............. Passed 0.10 sec test 429 Start 429: plm-reg-trans-a-check 429: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-661.75" "-DUPPER_THRESH=-661.65" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 429: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 429: Test timeout computed to be: 1500 test 432 Start 432: plm-reg-trans-b-check 432: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-661.75" "-DUPPER_THRESH=-661.65" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 432: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 432: Test timeout computed to be: 1500 test 435 Start 435: plm-reg-trans-mi-a-check 435: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-612.75" "-DUPPER_THRESH=-612.60" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 435: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 435: Test timeout computed to be: 1500 test 438 Start 438: plm-reg-autores-a-check 438: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-597.6" "-DUPPER_THRESH=-597.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 438: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 438: Test timeout computed to be: 1500 test 441 Start 441: plm-reg-autores-b-check 441: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-597.5" "-DUPPER_THRESH=-597.4" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 441: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 441: Test timeout computed to be: 1500 test 442 Start 442: plm-reg-point-dmap-a 442: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-reg-point-dmap-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 442: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 442: Test timeout computed to be: 1500 test 445 Start 445: plm-compose-a-warp 445: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-a-warp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 445: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 445: Test timeout computed to be: 1500 test 447 Start 447: plm-compose-a-check 447: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=13.75" "-DUPPER_THRESH=13.85" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 447: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 447: Test timeout computed to be: 1500 480/578 Test #390: plm-bsp-landmark-e-check .............. Passed 0.13 sec 387: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-d-stats.stdout.txt 387: -- REGEX is AVE *([-0-9.]*) 387: -- LOWER_THRESH is -991.5 387: -- UPPER_THRESH is -991.0 387: -- PARSED VALUE=|MIN -1000.000183 AVE -991.355164 MAX 0.000000 NONZERO 54488 NUMVOX 54872| 387: -- PARSED_VALUE=|-991.355164| 387: Not an error 481/578 Test #387: plm-bsp-landmark-d-check .............. Passed 0.13 sec 393: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-a-stats.stdout.txt 393: -- REGEX is AVE *([-0-9.]*) 393: -- LOWER_THRESH is -816 393: -- UPPER_THRESH is -815 393: -- PARSED VALUE=|MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872| 393: -- PARSED_VALUE=|-815.591492| 393: Not an error 482/578 Test #393: plm-bsp-dcos-a-check .................. Passed 0.12 sec 396: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-b-stats.stdout.txt 396: -- REGEX is AVE *([-0-9.]*) 396: -- LOWER_THRESH is -796.8 396: -- UPPER_THRESH is -795.8 396: -- PARSED VALUE=|MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872| 396: -- PARSED_VALUE=|-796.376221| 396: Not an error 483/578 Test #396: plm-bsp-dcos-b-check .................. Passed 0.12 sec 399: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-c-stats.stdout.txt 399: -- REGEX is AVE *([-0-9.]*) 399: -- LOWER_THRESH is -816 399: -- UPPER_THRESH is -815 399: -- PARSED VALUE=|MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872| 399: -- PARSED_VALUE=|-815.591492| 399: Not an error 484/578 Test #399: plm-bsp-dcos-c-check .................. Passed 0.12 sec 244: RETVAL: 0 244: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-a.mha 244: 244: STDERR: 244: Not an error 485/578 Test #244: plm-dmap-a ............................ Passed 0.40 sec 566: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 566: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a.mha 566: EXPECTED_ERRNO is 402: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-d-stats.stdout.txt 402: -- REGEX is AVE *([-0-9.]*) 402: -- LOWER_THRESH is -796.8 402: -- UPPER_THRESH is -795.8 402: -- PARSED VALUE=|MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872| 402: -- PARSED_VALUE=|-796.376221| 402: Not an error 486/578 Test #402: plm-bsp-dcos-d-check .................. Passed 0.10 sec 405: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-e-stats.stdout.txt 405: -- REGEX is AVE *([-0-9.]*) 405: -- LOWER_THRESH is -816 405: -- UPPER_THRESH is -815 405: -- PARSED VALUE=|MIN -1000.000183 AVE -815.591492 MAX 0.000000 NONZERO 44935 NUMVOX 54872| 405: -- PARSED_VALUE=|-815.591492| 405: Not an error 487/578 Test #405: plm-bsp-dcos-e-check .................. Passed 0.10 sec 408: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-dcos-f-stats.stdout.txt 408: -- REGEX is AVE *([-0-9.]*) 408: -- LOWER_THRESH is -796.8 408: -- UPPER_THRESH is -795.8 408: -- PARSED VALUE=|MIN -1000.000183 AVE -796.376221 MAX 0.000000 NONZERO 43813 NUMVOX 54872| 408: -- PARSED_VALUE=|-796.376221| 408: Not an error 488/578 Test #408: plm-bsp-dcos-f-check .................. Passed 0.09 sec 411: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-a-stats.stdout.txt 411: -- REGEX is Mean: *([-0-9.]*) 411: -- LOWER_THRESH is -22 411: -- UPPER_THRESH is -18 411: -- PARSED VALUE=|Mean: -20.000 -0.000 -0.000| 411: -- PARSED_VALUE=|-20.000| 411: Not an error 489/578 Test #411: plm-reg-multi-a-check ................. Passed 0.09 sec 414: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-multi-b-stats.stdout.txt 414: -- REGEX is AVE *([-0-9.]*) 414: -- LOWER_THRESH is -987 414: -- UPPER_THRESH is -984 414: -- PARSED VALUE=|MIN -1000.000183 AVE -985.762146 MAX 0.000000 NONZERO 54224 NUMVOX 54872| 414: -- PARSED_VALUE=|-985.762146| 414: Not an error 490/578 Test #414: plm-reg-multi-b-check ................. Passed 0.08 sec 417: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-dv-itk-translation-stats.stdout.txt 417: -- REGEX is AVE *([-0-9.]*) 417: -- LOWER_THRESH is -467.1 417: -- UPPER_THRESH is -366.9 417: -- PARSED VALUE=|MIN -999.914246 AVE -467.031616 MAX 1000.000000 NONZERO 54872 NUMVOX 54872| 417: -- PARSED_VALUE=|-467.031616| 417: Not an error 491/578 Test #417: plm-reg-dv-itk-translation-check ...... Passed 0.08 sec 418: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 418: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a.txt 418: EXPECTED_ERRNO is 419: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 419: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b.txt 419: EXPECTED_ERRNO is 420: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 420: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c.txt 420: EXPECTED_ERRNO is 421: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 421: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-d.txt 421: EXPECTED_ERRNO is test 449 Start 449: plm-compose-b-warp 449: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-b-warp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 449: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 449: Test timeout computed to be: 1500 test 451 Start 451: plm-compose-b-check 451: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=13.75" "-DUPPER_THRESH=13.85" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 451: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 451: Test timeout computed to be: 1500 test 453 Start 453: plm-compose-c-warp 453: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-compose-c-warp" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 453: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 453: Test timeout computed to be: 1500 test 455 Start 455: plm-compose-c-check 455: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=12.5" "-DUPPER_THRESH=12.6" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 455: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 455: Test timeout computed to be: 1500 test 458 Start 458: plm-resample-a-check 458: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-879.0" "-DUPPER_THRESH=-878.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 458: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 458: Test timeout computed to be: 1500 test 461 Start 461: plm-resample-b-check 461: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-879.0" "-DUPPER_THRESH=-878.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 461: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 461: Test timeout computed to be: 1500 test 464 Start 464: plm-resample-c-check 464: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=6.67" "-DUPPER_THRESH=6.74" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 464: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 464: Test timeout computed to be: 1500 test 467 Start 467: plm-scale-a-check 467: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-3.735" "-DUPPER_THRESH=-3.730" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 467: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 467: Test timeout computed to be: 1500 test 470 Start 470: plm-scale-vf-a-check 470: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=4.000" "-DUPPER_THRESH=4.000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 470: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 470: Test timeout computed to be: 1500 test 476 Start 476: plm-thumbnail-a-check 476: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=76.85" "-DUPPER_THRESH=76.95" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 476: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 476: Test timeout computed to be: 1500 test 479 Start 479: plm-thumbnail-b-check 479: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.0" "-DUPPER_THRESH=0.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 479: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 479: Test timeout computed to be: 1500 test 482 Start 482: plm-thumbnail-c-check 482: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=8.1" "-DUPPER_THRESH=8.3" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 482: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 482: Test timeout computed to be: 1500 376: RETVAL: 0 376: STDOUT: Min: -7.243 -7.243 -7.243 376: Mean: -0.004 -0.004 -0.004 376: Max: 7.465 7.465 7.465 376: Mean abs: 0.231 0.231 0.231 376: Ave len: 0.460 376: Jacobian: MINJAC 0.443734 MAXJAC 1.03502 376: Energy: MINDIL -0.712 MAXDIL 0.0370853 376: MAXSTRAIN 0.0397 TOTSTRAIN 73.6175 376: Second derivatives: MINSECDER 9.85e-12 MAXSECDER 0.0182 376: AVESECDER 0.00018 INTSECDER 2.24e+04 376: Max second derivative at: (20 20 16) 376: 376: STDERR: 376: Not an error 422: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 422: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-e.txt 422: EXPECTED_ERRNO is 246: RETVAL: 0 246: STDOUT: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-c.mha 246: 246: STDERR: 246: Not an error 423: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 423: PARMS is register;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a.txt 423: EXPECTED_ERRNO is 426: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-process-a-stats.stdout.txt 426: -- REGEX is AVE *([-0-9.]*) 426: -- LOWER_THRESH is -491.0 426: -- UPPER_THRESH is -490.0 426: -- PARSED VALUE=|MIN -500.000000 AVE -490.647552 MAX 0.000000 NONZERO 54871 NUMVOX 54872| 426: -- PARSED_VALUE=|-490.647552| 426: Not an error 429: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-a-stats.stdout.txt 429: -- REGEX is AVE *([-0-9.]*) 429: -- LOWER_THRESH is -661.75 429: -- UPPER_THRESH is -661.65 429: -- PARSED VALUE=|MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872| 429: -- PARSED_VALUE=|-661.690491| 429: Not an error 432: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-b-stats.stdout.txt 432: -- REGEX is AVE *([-0-9.]*) 432: -- LOWER_THRESH is -661.75 432: -- UPPER_THRESH is -661.65 432: -- PARSED VALUE=|MIN -999.904663 AVE -661.690491 MAX 0.000000 NONZERO 42439 NUMVOX 54872| 432: -- PARSED_VALUE=|-661.690491| 432: Not an error 435: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-trans-mi-a-stats.stdout.txt 435: -- REGEX is AVE *([-0-9.]*) 435: -- LOWER_THRESH is -612.75 435: -- UPPER_THRESH is -612.60 435: -- PARSED VALUE=|MIN -999.826416 AVE -612.681030 MAX 0.000000 NONZERO 39701 NUMVOX 54872| 435: -- PARSED_VALUE=|-612.681030| 435: Not an error 441: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-b-stats.stdout.txt 441: -- REGEX is AVE *([-0-9.]*) 441: -- LOWER_THRESH is -597.5 441: -- UPPER_THRESH is -597.4 441: -- PARSED VALUE=|MIN -999.769348 AVE -597.450806 MAX 0.000000 NONZERO 38880 NUMVOX 54872| 441: -- PARSED_VALUE=|-597.450806| 441: Not an error 442: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 442: PARMS is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a.txt 442: EXPECTED_ERRNO is 492/578 Test #246: plm-dmap-c ............................ Passed 0.45 sec 493/578 Test #376: plm-bsp-regularize-numeric-stats ...... Passed 0.34 sec 494/578 Test #426: plm-reg-process-a-check ............... Passed 0.10 sec 495/578 Test #429: plm-reg-trans-a-check ................. Passed 0.10 sec 496/578 Test #432: plm-reg-trans-b-check ................. Passed 0.09 sec test 377 Start 377: plm-bsp-regularize-numeric-check 377: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-stats.stdout.txt" "-DREGEX=MINJAC *([-0-9.]*)" "-DLOWER_THRESH=0.440" "-DUPPER_THRESH=0.445" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 377: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 377: Test timeout computed to be: 1500 test 485 Start 485: plm-intersect-check 485: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=729" "-DUPPER_THRESH=729" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 485: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 485: Test timeout computed to be: 1500 test 488 Start 488: plm-union-check 488: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=1271" "-DUPPER_THRESH=1271" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 488: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 488: Test timeout computed to be: 1500 test 491 Start 491: plm-threshold-a-check 491: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.306" "-DUPPER_THRESH=0.308" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 491: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 491: Test timeout computed to be: 1500 test 494 Start 494: plm-threshold-b-check 494: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.670" "-DUPPER_THRESH=0.672" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 494: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 494: Test timeout computed to be: 1500 497/578 Test #435: plm-reg-trans-mi-a-check .............. Passed 0.11 sec 498/578 Test #441: plm-reg-autores-b-check ............... Passed 0.10 sec 438: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-autores-a-stats.stdout.txt 438: -- REGEX is AVE *([-0-9.]*) 438: -- LOWER_THRESH is -597.6 438: -- UPPER_THRESH is -597.5 438: -- PARSED VALUE=|MIN -999.770874 AVE -597.535889 MAX 0.000000 NONZERO 38880 NUMVOX 54872| 438: -- PARSED_VALUE=|-597.535889| 438: Not an error 499/578 Test #438: plm-reg-autores-a-check ............... Passed 0.10 sec 445: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 445: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha 445: EXPECTED_ERRNO is 447: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-stats.stdout.txt 447: -- REGEX is Mean: *([-0-9.]*) 447: -- LOWER_THRESH is 13.75 447: -- UPPER_THRESH is 13.85 447: -- PARSED VALUE=|Mean: 13.794 -0.035 -0.034| 447: -- PARSED_VALUE=|13.794| 447: Not an error 500/578 Test #447: plm-compose-a-check ................... Passed 0.08 sec 332: RETVAL: 0 332: STDOUT: MIN -999.989136 AVE -739.933289 MAX 0.000000 NONZERO 46595 NUMVOX 54872 332: 332: STDERR: 332: Not an error 501/578 Test #332: plm-bsp-mse-p-stats ................... Passed 0.30 sec 330: RETVAL: 0 330: STDOUT: MIN -999.989990 AVE -743.121460 MAX 0.000000 NONZERO 46674 NUMVOX 54872 330: 330: STDERR: 330: Not an error 502/578 Test #330: plm-bsp-mse-o-stats ................... Passed 0.30 sec 334: RETVAL: 0 334: STDOUT: MIN -999.989136 AVE -739.933289 MAX 0.000000 NONZERO 46595 NUMVOX 54872 334: 334: STDERR: 334: Not an error 503/578 Test #334: plm-bsp-mse-q-stats ................... Passed 0.30 sec 449: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 449: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha 449: EXPECTED_ERRNO is 451: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-stats.stdout.txt 451: -- REGEX is Mean: *([-0-9.]*) 451: -- LOWER_THRESH is 13.75 451: -- UPPER_THRESH is 13.85 451: -- PARSED VALUE=|Mean: 13.794 -0.035 -0.034| 451: -- PARSED_VALUE=|13.794| 451: Not an error 504/578 Test #451: plm-compose-b-check ................... Passed 0.07 sec 453: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 453: PARMS is warp;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/gauss-5.mha;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha;--output-img;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha 453: EXPECTED_ERRNO is 455: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-stats.stdout.txt 455: -- REGEX is Mean: *([-0-9.]*) 455: -- LOWER_THRESH is 12.5 455: -- UPPER_THRESH is 12.6 455: -- PARSED VALUE=|Mean: 12.523 -0.008 -0.008| 455: -- PARSED_VALUE=|12.523| 455: Not an error 505/578 Test #455: plm-compose-c-check ................... Passed 0.06 sec 458: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-a-stats.stdout.txt 458: -- REGEX is AVE *([-0-9.]*) 458: -- LOWER_THRESH is -879.0 458: -- UPPER_THRESH is -878.0 458: -- PARSED VALUE=|MIN -999.857544 AVE -878.686035 MAX -12.873093 NONZERO 6859 NUMVOX 6859| 458: -- PARSED_VALUE=|-878.686035| 458: Not an error 506/578 Test #458: plm-resample-a-check .................. Passed 0.06 sec 461: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-b-stats.stdout.txt 461: -- REGEX is AVE *([-0-9.]*) 461: -- LOWER_THRESH is -879.0 461: -- UPPER_THRESH is -878.0 461: -- PARSED VALUE=|MIN -999.915161 AVE -878.621277 MAX -0.000005 NONZERO 64000 NUMVOX 64000| 461: -- PARSED_VALUE=|-878.621277| 461: Not an error 507/578 Test #461: plm-resample-b-check .................. Passed 0.05 sec 464: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-resample-c-stats.stdout.txt 464: -- REGEX is Mean: *([-0-9.]*) 464: -- LOWER_THRESH is 6.67 464: -- UPPER_THRESH is 6.74 464: -- PARSED VALUE=|Mean: 6.707 -0.405 -0.405| 464: -- PARSED_VALUE=|6.707| 464: Not an error 508/578 Test #464: plm-resample-c-check .................. Passed 0.05 sec test 497 Start 497: plm-threshold-c-check 497: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c-stats.stdout.txt" "-DREGEX=NONZERO *([-0-9.]*)" "-DLOWER_THRESH=1206" "-DUPPER_THRESH=1206" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 497: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 497: Test timeout computed to be: 1500 test 498 Start 498: plm-warp-pointset-a 498: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-pointset-a" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-a.fcsv" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 498: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 498: Test timeout computed to be: 1500 test 499 Start 499: plm-warp-pointset-b 499: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-pointset-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-b.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 499: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 499: Test timeout computed to be: 1500 test 500 Start 500: plm-warp-pointset-c 500: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-warp-pointset-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-landmark-c.fcsv" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 500: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 500: Test timeout computed to be: 1500 test 503 Start 503: plm-warp-a-check 503: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=5.77" "-DUPPER_THRESH=5.78" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 503: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 503: Test timeout computed to be: 1500 test 506 Start 506: plm-warp-b-check-1 506: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-stats-1.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=5.77" "-DUPPER_THRESH=5.78" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 506: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 506: Test timeout computed to be: 1500 test 508 Start 508: plm-warp-b-check-2 508: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-stats-2.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-775.7" "-DUPPER_THRESH=-775.6" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 508: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 508: Test timeout computed to be: 1500 test 511 Start 511: plm-warp-c-check 511: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=9.2" "-DUPPER_THRESH=9.3" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 511: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 511: Test timeout computed to be: 1500 test 514 Start 514: plm-warp-d-check 514: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=9.2" "-DUPPER_THRESH=9.3" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 514: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 514: Test timeout computed to be: 1500 test 517 Start 517: plm-warp-f-check-1 517: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-stats-1.stdout.txt" "-DREGEX=Direction = *[-0-9.]* *[-0-9.]* *([-0-9.]*)" "-DLOWER_THRESH=-0.379" "-DUPPER_THRESH=-0.378" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 517: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 517: Test timeout computed to be: 1500 test 520 Start 520: plm-warp-g-check-1 520: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-764.0" "-DUPPER_THRESH=-763.6" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 520: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 520: Test timeout computed to be: 1500 test 523 Start 523: plm-warp-h-check-1 523: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=113.5" "-DUPPER_THRESH=114.0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 523: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 523: Test timeout computed to be: 1500 476: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-a-stats.stdout.txt 476: -- REGEX is AVE *([-0-9.]*) 476: -- LOWER_THRESH is 76.85 476: -- UPPER_THRESH is 76.95 476: -- PARSED VALUE=|MIN 0.000000 AVE 76.906250 MAX 255.000000 NONZERO 88 NUMVOX 256| 476: -- PARSED_VALUE=|76.906250| 476: Not an error 467: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-a-stats.stdout.txt 467: -- REGEX is AVE *([-0-9.]*) 467: -- LOWER_THRESH is -3.735 467: -- UPPER_THRESH is -3.730 467: -- PARSED VALUE=|MIN -400.000000 AVE -3.732322 MAX 0.000000 NONZERO 512 NUMVOX 54872| 467: -- PARSED_VALUE=|-3.732322| 467: Not an error 470: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-scale-vf-a-stats.stdout.txt 470: -- REGEX is Mean: *([-0-9.]*) 470: -- LOWER_THRESH is 4.000 470: -- UPPER_THRESH is 4.000 470: -- PARSED VALUE=|Mean: 4.000 0.000 0.000| 470: -- PARSED_VALUE=|4.000| 470: Not an error 355: RETVAL: 0 355: STDOUT: MIN -999.977539 AVE -731.734009 MAX 0.000000 NONZERO 46415 NUMVOX 54872 355: 355: STDERR: 355: Not an error 336: RETVAL: 0 336: STDOUT: MIN -999.989136 AVE -739.933289 MAX 0.000000 NONZERO 46595 NUMVOX 54872 336: 336: STDERR: 336: Not an error 350: RETVAL: 0 350: STDOUT: MIN -999.995789 AVE -886.449097 MAX -1.453729 NONZERO 54872 NUMVOX 54872 350: 350: STDERR: 350: Not an error 482: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-c-stats.stdout.txt 482: -- REGEX is AVE *([-0-9.]*) 482: -- LOWER_THRESH is 8.1 482: -- UPPER_THRESH is 8.3 482: -- PARSED VALUE=|MIN 0.000000 AVE 8.203125 MAX 119.000000 NONZERO 32 NUMVOX 256| 482: -- PARSED_VALUE=|8.203125| 482: Not an error 479: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-thumbnail-b-stats.stdout.txt 479: -- REGEX is AVE *([-0-9.]*) 479: -- LOWER_THRESH is 0.0 479: -- UPPER_THRESH is 0.0 479: -- PARSED VALUE=|MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 256| 479: -- PARSED_VALUE=|0.000000| 479: Not an error 509/578 Test #336: plm-bsp-mse-r-stats ................... Passed 0.35 sec 510/578 Test #355: plm-bsp-resume-stats .................. Passed 0.32 sec 511/578 Test #467: plm-scale-a-check ..................... Passed 0.09 sec 512/578 Test #470: plm-scale-vf-a-check .................. Passed 0.09 sec 513/578 Test #476: plm-thumbnail-a-check ................. Passed 0.09 sec 514/578 Test #479: plm-thumbnail-b-check ................. Passed 0.09 sec test 526 Start 526: plm-warp-i-check-1 526: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-stats-1.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=114.4" "-DUPPER_THRESH=114.7" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 526: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 526: Test timeout computed to be: 1500 test 529 Start 529: plm-xf-convert-c 529: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-b.txt;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-c-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 529: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 529: Test timeout computed to be: 1500 test 533 Start 533: plm-xf-convert-d-warp-1-check 533: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-745.8" "-DUPPER_THRESH=-744.8" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 533: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 533: Test timeout computed to be: 1500 test 536 Start 536: plm-xf-convert-d-warp-2-check 536: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=-751.0" "-DUPPER_THRESH=-744.8" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 536: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 536: Test timeout computed to be: 1500 test 537 Start 537: plm-xf-convert-e 537: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-e" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-e;--fixed-rcs;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 537: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 537: Test timeout computed to be: 1500 test 538 Start 538: plm-xf-convert-f 538: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-f" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-f;--fixed-image;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--moving-image;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 538: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 538: Test timeout computed to be: 1500 515/578 Test #350: plm-bsp-sm-multi-a-stats .............. Passed 0.36 sec 516/578 Test #482: plm-thumbnail-c-check ................. Passed 0.11 sec 377: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-regularize-numeric-stats.stdout.txt 377: -- REGEX is MINJAC *([-0-9.]*) 377: -- LOWER_THRESH is 0.440 377: -- UPPER_THRESH is 0.445 377: -- PARSED VALUE=|Jacobian: MINJAC 0.443734 MAXJAC 1.03502| 377: -- PARSED_VALUE=|0.443734| 377: Not an error 517/578 Test #377: plm-bsp-regularize-numeric-check ...... Passed 0.10 sec 485: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-intersect-stats.stdout.txt 485: -- REGEX is NONZERO *([-0-9.]*) 485: -- LOWER_THRESH is 729 485: -- UPPER_THRESH is 729 485: -- PARSED VALUE=|MIN 0.000000 AVE 0.013285 MAX 1.000000 NONZERO 729 NUMVOX 54872| 485: -- PARSED_VALUE=|729| 485: Not an error 518/578 Test #485: plm-intersect-check ................... Passed 0.10 sec 488: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-union-stats.stdout.txt 488: -- REGEX is NONZERO *([-0-9.]*) 488: -- LOWER_THRESH is 1271 488: -- UPPER_THRESH is 1271 488: -- PARSED VALUE=|MIN 0.000000 AVE 0.023163 MAX 1.000000 NONZERO 1271 NUMVOX 54872| 488: -- PARSED_VALUE=|1271| 488: Not an error 519/578 Test #488: plm-union-check ....................... Passed 0.10 sec 494: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-b-stats.stdout.txt 494: -- REGEX is AVE *([-0-9.]*) 494: -- LOWER_THRESH is 0.670 494: -- UPPER_THRESH is 0.672 494: -- PARSED VALUE=|MIN 0.000000 AVE 0.671290 MAX 1.000000 NONZERO 36835 NUMVOX 54872| 494: -- PARSED_VALUE=|0.671290| 494: Not an error 520/578 Test #494: plm-threshold-b-check ................. Passed 0.09 sec 491: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-a-stats.stdout.txt 491: -- REGEX is AVE *([-0-9.]*) 491: -- LOWER_THRESH is 0.306 491: -- UPPER_THRESH is 0.308 491: -- PARSED VALUE=|MIN 0.000000 AVE 0.306732 MAX 1.000000 NONZERO 16831 NUMVOX 54872| 491: -- PARSED_VALUE=|0.306732| 491: Not an error 521/578 Test #491: plm-threshold-a-check ................. Passed 0.10 sec 497: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-threshold-c-stats.stdout.txt 497: -- REGEX is NONZERO *([-0-9.]*) 497: -- LOWER_THRESH is 1206 497: -- UPPER_THRESH is 1206 497: -- PARSED VALUE=|MIN 0.000000 AVE 0.021978 MAX 1.000000 NONZERO 1206 NUMVOX 54872| 497: -- PARSED_VALUE=|1206| 497: Not an error 522/578 Test #497: plm-threshold-c-check ................. Passed 0.09 sec 498: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 498: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-a.fcsv 498: EXPECTED_ERRNO is 499: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 499: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-xf.txt;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-b.txt 499: EXPECTED_ERRNO is 500: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 500: PARMS is warp;--xf;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/landmark-warp-c-vf.mha;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv;--output-pointset;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-landmark-c.fcsv 500: EXPECTED_ERRNO is 503: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-a-stats.stdout.txt 503: -- REGEX is Mean: *([-0-9.]*) 503: -- LOWER_THRESH is 5.77 503: -- UPPER_THRESH is 5.78 503: -- PARSED VALUE=|Mean: 5.773 0.002 0.002| 503: -- PARSED_VALUE=|5.773| 503: Not an error 523/578 Test #503: plm-warp-a-check ...................... Passed 0.08 sec 506: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-stats-1.stdout.txt 506: -- REGEX is Mean: *([-0-9.]*) 506: -- LOWER_THRESH is 5.77 506: -- UPPER_THRESH is 5.78 506: -- PARSED VALUE=|Mean: 5.773 0.002 0.002| 506: -- PARSED_VALUE=|5.773| 506: Not an error 524/578 Test #506: plm-warp-b-check-1 .................... Passed 0.07 sec 508: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-b-stats-2.stdout.txt 508: -- REGEX is AVE *([-0-9.]*) 508: -- LOWER_THRESH is -775.7 508: -- UPPER_THRESH is -775.6 508: -- PARSED VALUE=|MIN -999.876892 AVE -775.668274 MAX 0.000000 NONZERO 49099 NUMVOX 54872| 508: -- PARSED_VALUE=|-775.668274| 508: Not an error 511: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-c-stats.stdout.txt 511: -- REGEX is AVE *([-0-9.]*) 511: -- LOWER_THRESH is 9.2 511: -- UPPER_THRESH is 9.3 511: -- PARSED VALUE=|MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872| 511: -- PARSED_VALUE=|9.220003| 511: Not an error 525/578 Test #511: plm-warp-c-check ...................... Passed 0.06 sec 514: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-d-stats.stdout.txt 514: -- REGEX is AVE *([-0-9.]*) 514: -- LOWER_THRESH is 9.2 514: -- UPPER_THRESH is 9.3 514: -- PARSED VALUE=|MIN 0.000000 AVE 9.220003 MAX 255.000000 NONZERO 1984 NUMVOX 54872| 514: -- PARSED_VALUE=|9.220003| 514: Not an error test 539 Start 539: plm-xf-convert-g 539: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=plm-xf-convert-g" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-vf.nrrd;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-g;--fixed-rcs;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 539: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 539: Test timeout computed to be: 1500 test 542 Start 542: plm-xf-convert-h-check 542: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h-stats.stdout.txt" "-DREGEX=Min: *([-0-9.]*)" "-DLOWER_THRESH=20" "-DUPPER_THRESH=20" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 542: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 542: Test timeout computed to be: 1500 test 545 Start 545: plm-xf-convert-i-check 545: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-stats.stdout.txt" "-DREGEX=Min: *([-0-9.]*)" "-DLOWER_THRESH=7.155" "-DUPPER_THRESH=7.165" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 545: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 545: Test timeout computed to be: 1500 test 548 Start 548: xf-invert-vf-zero-1-check 548: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1-stats.stdout.txt" "-DREGEX=Mean abs: *([-0-9.]*)" "-DLOWER_THRESH=0.000" "-DUPPER_THRESH=0.000" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 548: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 548: Test timeout computed to be: 1500 test 551 Start 551: xf-invert-vf-trans-1-check 551: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1-stats.stdout.txt" "-DREGEX=Mean: *([-0-9.]*)" "-DLOWER_THRESH=-10.0" "-DUPPER_THRESH=-9.9" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 551: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 551: Test timeout computed to be: 1500 test 553 Start 553: xf-invert-vrs-a-check 553: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-a.tfm" "-DREGEX=^Parameters: *(.*)$" "-DMATCH_STRING=0 0 0 -20 0 0" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckString.cmake" 553: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 553: Test timeout computed to be: 1500 test 555 Start 555: xf-invert-vrs-b-check 555: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-b.tfm" "-DREGEX=^Parameters: *([-0-9.]*) *0 *0 *0 *0 *0 *$" "-DLOWER_THRESH=-0.52361" "-DUPPER_THRESH=-0.52359" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 555: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 555: Test timeout computed to be: 1500 test 558 Start 558: proton-dose-1-check 558: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.140" "-DUPPER_THRESH=0.145" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 558: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 558: Test timeout computed to be: 1500 test 561 Start 561: proton-dose-4a-check 561: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.26" "-DUPPER_THRESH=0.27" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 561: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 561: Test timeout computed to be: 1500 test 564 Start 564: proton-dose-4d-check 564: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.38" "-DUPPER_THRESH=0.39" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 564: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 564: Test timeout computed to be: 1500 test 573 Start 573: proton-dose-6a-check 573: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.26" "-DUPPER_THRESH=0.27" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 573: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 573: Test timeout computed to be: 1500 517: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-f-stats-1.stdout.txt 517: -- REGEX is Direction = *[-0-9.]* *[-0-9.]* *([-0-9.]*) 517: -- LOWER_THRESH is -0.379 517: -- UPPER_THRESH is -0.378 517: -- PARSED VALUE=|Direction = 0.9254 0.0180 -0.3785 0.1632 0.8826 0.4410 0.3420 -0.4698 0.8138| 517: -- PARSED_VALUE=|-0.3785| 517: Not an error 364: RETVAL: 0 364: STDOUT: Loading fixed image [0]: gauss-1.mha 364: Loading moving image [0]: gauss-2.mha 364: Launching registration worker thread 364: Inside registration worker thread 364: Doing registration stage 364: [1] xf_in->m_type = 0, xf_out->m_type = 0 364: RESAMPLE 1 1: (2 2 2), (2 2 2) 364: RESAMPLE 1 1: (2 2 2), (2 2 2) 364: volume_calc_grad complete. 364: bspline_xform_initialize 364: rdims = (2,2,2) 364: vox_per_rgn = (11,11,11) 364: cdims = (5 5 5) 364: Algorithm flavor = h 364: Threading = 0 364: >> Checking JH allocation 364: BSPLINE PARMS 364: max_its = 5 364: max_feval = 5 364: BSPLINE XFORM HEADER 364: vox_per_rgn = 11 11 11 364: roi_offset = 0 0 0 364: roi_dim = 19 19 19 364: img_dc = 1 0 0 0 1 0 0 0 1 364: BST METRICS 364: MET 110100 MSE 1.000000 364: Setting nmax, mmax = 375 21 364: >>> START 364: This problem is unconstrained. 364: [ 0, 0] MSE 18756.236 NV 6859 GM -2980.067 GN 852 [ 0.004 s ] 364: CMIN 0.00 CAVG 0.00 CMAX 0.00 364: LSD 0.00 364: [ 0, 1] MSE 17838.633 NV 6859 GM -2882.393 GN 824 [ 0.004 s ] 364: CMIN -0.07 CAVG 0.01 CMAX 0.68 364: LSD 1.00 364: [ 0, 2] MSE 14464.859 NV 6858 GM -2822.149 GN 824 [ 0.004 s ] 364: CMIN -0.35 CAVG 0.05 CMAX 3.40 364: LSD 5.00 364: [ 0, 3] MSE 3829.066 NV 6286 GM -1585.570 GN 459 [ 0.004 s ] 364: CMIN -1.48 CAVG 0.20 CMAX 14.26 364: LSD 21.00 364: [ 1, 4] MSE 3098.538 NV 5455 GM 1176.092 GN 399 [ 0.003 s ] 364: CMIN -1.74 CAVG 0.44 CMAX 32.50 364: LSD 27.95 364: [ 2, 5] MSE 282.038 NV 5851 GM 54.495 GN 43.4 [ 0.006 s ] 364: CMIN -1.73 CAVG 0.34 CMAX 23.99 364: LSD 13.11 364: [2] xf_out->m_type = 9, xf_in->m_type = 0 364: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 364: bspline_xform_initialize 364: rdims = (2,2,2) 364: vox_per_rgn = (22,22,22) 364: cdims = (5 5 5) 364: ** Registration worker thread finished. 364: Writing transformation ... 364: Load: 0.0404661 364: Run: 0.0360739 364: Save: 0.00490594 364: Total: 0.0814459 364: Finished! 364: 364: STDERR: 364: Not an error 520: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-g-stats-1.stdout.txt 520: -- REGEX is AVE *([-0-9.]*) 520: -- LOWER_THRESH is -764.0 520: -- UPPER_THRESH is -763.6 520: -- PARSED VALUE=|MIN -1000.000000 AVE -763.820862 MAX 0.000000 NONZERO 42085 NUMVOX 54872| 520: -- PARSED_VALUE=|-763.820862| 520: Not an error 523: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-h-stats-1.stdout.txt 523: -- REGEX is AVE *([-0-9.]*) 523: -- LOWER_THRESH is 113.5 523: -- UPPER_THRESH is 114.0 523: -- PARSED VALUE=|MIN 0.000000 AVE 113.750511 MAX 996.000000 NONZERO 42867 NUMVOX 54872| 523: -- PARSED_VALUE=|113.750511| 523: Not an error 526: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-i-stats-1.stdout.txt 526: -- REGEX is AVE *([-0-9.]*) 526: -- LOWER_THRESH is 114.4 526: -- UPPER_THRESH is 114.7 526: -- PARSED VALUE=|MIN 0.000000 AVE 114.545189 MAX 996.552368 NONZERO 43320 NUMVOX 54872| 526: -- PARSED_VALUE=|114.545189| 526: Not an error 529: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 529: PARMS is xf-convert;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-b.txt;--output;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-c-vf.mha;--output-type;vf;--dim;4 4 4;--origin;-187.5 -187.5 -187.5;--spacing;125 125 125 529: EXPECTED_ERRNO is 533: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-1-stats.stdout.txt 533: -- REGEX is AVE *([-0-9.]*) 533: -- LOWER_THRESH is -745.8 533: -- UPPER_THRESH is -744.8 533: -- PARSED VALUE=|MIN -999.979248 AVE -745.231567 MAX 0.000000 NONZERO 5851 NUMVOX 6859| 533: -- PARSED_VALUE=|-745.231567| 533: Not an error 536: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-d-warp-2-stats.stdout.txt 536: -- REGEX is AVE *([-0-9.]*) 536: -- LOWER_THRESH is -751.0 536: -- UPPER_THRESH is -744.8 536: -- PARSED VALUE=|MIN -999.988708 AVE -745.347717 MAX 0.000000 NONZERO 46833 NUMVOX 54872| 536: -- PARSED_VALUE=|-745.347717| 536: Not an error 526/578 Test #364: plm-bsp-itk-output .................... Passed 0.39 sec 527/578 Test #508: plm-warp-b-check-2 .................... Passed 0.11 sec 528/578 Test #514: plm-warp-d-check ...................... Passed 0.11 sec 529/578 Test #517: plm-warp-f-check-1 .................... Passed 0.10 sec 530/578 Test #520: plm-warp-g-check-1 .................... Passed 0.10 sec 531/578 Test #523: plm-warp-h-check-1 .................... Passed 0.09 sec 532/578 Test #526: plm-warp-i-check-1 .................... Passed 0.08 sec 533/578 Test #536: plm-xf-convert-d-warp-2-check ......... Passed 0.07 sec 534/578 Test #533: plm-xf-convert-d-warp-1-check ......... Passed 0.08 sec 537: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 537: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-e;--fixed-rcs;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom 537: EXPECTED_ERRNO is 538: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 538: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/itk-rigid-a.tfm;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-f;--fixed-image;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha;--moving-image;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 538: EXPECTED_ERRNO is 566: RETVAL: 0 566: STDOUT: MIN 0.000000 AVE 0.266122 MAX 100.000000 NONZERO 932 NUMVOX 216000 566: 566: STDERR: 566: Not an error 535/578 Test #566: proton-dose-5a-stats .................. Passed 0.33 sec 539: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 539: PARMS is xf-convert;--filenames-without-uids;--input;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-rect-vf.nrrd;--output-dicom;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-g;--fixed-rcs;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2-dicom;--moving-rcs;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3-dicom 539: EXPECTED_ERRNO is 542: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-h-stats.stdout.txt 542: -- REGEX is Min: *([-0-9.]*) 542: -- LOWER_THRESH is 20 542: -- UPPER_THRESH is 20 542: -- PARSED VALUE=|Min: 20.000 0.000 0.000| 542: -- PARSED_VALUE=|20.000| 542: Not an error 536/578 Test #542: plm-xf-convert-h-check ................ Passed 0.04 sec 545: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-i-stats.stdout.txt 545: -- REGEX is Min: *([-0-9.]*) 545: -- LOWER_THRESH is 7.155 545: -- UPPER_THRESH is 7.165 545: -- PARSED VALUE=|Min: 7.161 -0.245 -0.245| 545: -- PARSED_VALUE=|7.161| 545: Not an error 537/578 Test #545: plm-xf-convert-i-check ................ Passed 0.04 sec 548: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-zero-1-stats.stdout.txt 548: -- REGEX is Mean abs: *([-0-9.]*) 548: -- LOWER_THRESH is 0.000 548: -- UPPER_THRESH is 0.000 548: -- PARSED VALUE=|Mean abs: 0.000 0.000 0.000| 548: -- PARSED_VALUE=|0.000| 548: Not an error 538/578 Test #548: xf-invert-vf-zero-1-check ............. Passed 0.03 sec 553: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-a.tfm 553: -- REGEX is ^Parameters: *(.*)$ 553: -- MATCH_STRING is 0 0 0 -20 0 0 553: -- PARSED VALUE=|Parameters: 0 0 0 -20 0 0| 553: -- PARSED_VALUE=|0 0 0 -20 0 0| 553: -- LENGTH=13 553: -- |0 0 0 -20 0 0|0 0 0 -20 0 0| 553: Not an error test 567 Start 567: proton-dose-5a-check 567: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.26" "-DUPPER_THRESH=0.27" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 567: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 567: Test timeout computed to be: 1500 555: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vrs-b.tfm 555: -- REGEX is ^Parameters: *([-0-9.]*) *0 *0 *0 *0 *0 *$ 555: -- LOWER_THRESH is -0.52361 555: -- UPPER_THRESH is -0.52359 555: -- PARSED VALUE=|Parameters: -0.5236 0 0 0 0 0| 555: -- PARSED_VALUE=|-0.5236| 555: Not an error 551: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/xf-invert-vf-trans-1-stats.stdout.txt 551: -- REGEX is Mean: *([-0-9.]*) 551: -- LOWER_THRESH is -10.0 551: -- UPPER_THRESH is -9.9 551: -- PARSED VALUE=|Mean: -9.999 0.000 0.000| 551: -- PARSED_VALUE=|-9.999| 551: Not an error 539/578 Test #553: xf-invert-vrs-a-check ................. Passed 0.03 sec 558: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-1-stats.stdout.txt 558: -- REGEX is AVE *([-0-9.]*) 558: -- LOWER_THRESH is 0.140 558: -- UPPER_THRESH is 0.145 558: -- PARSED VALUE=|MIN 0.000000 AVE 0.143515 MAX 70.000000 NONZERO 775 NUMVOX 216000| 558: -- PARSED_VALUE=|0.143515| 558: Not an error 561: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4a-stats.stdout.txt 561: -- REGEX is AVE *([-0-9.]*) 561: -- LOWER_THRESH is 0.26 561: -- UPPER_THRESH is 0.27 561: -- PARSED VALUE=|MIN 0.000000 AVE 0.266114 MAX 100.000000 NONZERO 932 NUMVOX 216000| 561: -- PARSED_VALUE=|0.266114| 561: Not an error 564: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-4d-stats.stdout.txt 564: -- REGEX is AVE *([-0-9.]*) 564: -- LOWER_THRESH is 0.38 564: -- UPPER_THRESH is 0.39 564: -- PARSED VALUE=|MIN 0.000000 AVE 0.386816 MAX 100.000000 NONZERO 3614 NUMVOX 216000| 564: -- PARSED_VALUE=|0.386816| 564: Not an error 540/578 Test #551: xf-invert-vf-trans-1-check ............ Passed 0.04 sec 541/578 Test #555: xf-invert-vrs-b-check ................. Passed 0.04 sec 542/578 Test #564: proton-dose-4d-check .................. Passed 0.02 sec 573: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-6a-stats.stdout.txt 573: -- REGEX is AVE *([-0-9.]*) 573: -- LOWER_THRESH is 0.26 573: -- UPPER_THRESH is 0.27 573: -- PARSED VALUE=|MIN 0.000000 AVE 0.266122 MAX 100.000000 NONZERO 932 NUMVOX 216000| 573: -- PARSED_VALUE=|0.266122| 543/578 Test #558: proton-dose-1-check ................... Passed 0.03 sec 573: Not an error 544/578 Test #561: proton-dose-4a-check .................. Passed 0.03 sec 545/578 Test #573: proton-dose-6a-check .................. Passed 0.02 sec 378: RETVAL: 0 378: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-2.mha 378: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha 378: Loading fixed landmarks: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-2.fcsv 378: Loading moving landmarks: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/Data/fiducials-rect-3.fcsv 378: Launching registration worker thread 378: Inside registration worker thread 378: Doing registration stage 378: [1] xf_in->m_type = 0, xf_out->m_type = 0 378: RESAMPLE 1 1: (2 2 2), (2 2 2) 378: RESAMPLE 1 1: (2 2 2), (2 2 2) 378: volume_calc_grad complete. 378: bspline_xform_initialize 378: Warning: vox_per_rgn was less than 4. 378: Warning: vox_per_rgn was less than 4. 378: Warning: vox_per_rgn was less than 4. 378: rdims = (5,5,5) 378: vox_per_rgn = (4,4,4) 378: cdims = (8 8 8) 378: Algorithm flavor = h 378: Threading = 0 378: Landmarks: 8 fixed, 8 moving, lambda = 1.000000 378: >> Checking JH allocation 378: Computing landmark grid coordinates 378: image dc=1 0 0 0 1 0 0 0 1 378: image or=-236.842 -236.842 -236.842 378: image dm=19 19 19 378: [0], (-26.2717 -52.1629 46.0528) -> (8.001675 7.017809 10.750006) 378: [1], (65.8702 -52.5436 46.053) -> (11.503067 7.003343 10.750014) 378: [2], (65.8702 52.5439 46.053) -> (11.503067 10.996667 10.750014) 378: [3], (-25.5102 53.6862 46.053) -> (8.030612 11.040074 10.750014) 378: [4], (-25.891 -52.1629 -46.0525) -> (8.016141 7.017809 7.250004) 378: [5], (66.6317 -53.3051 -46.053) -> (11.532004 6.974406 7.249985) 378: [6], (65.8702 53.3054 -46.053) -> (11.503067 11.025604 7.249985) 378: [7], (-25.1295 53.6862 -46.053) -> (8.045078 11.040074 7.249985) 378: BSPLINE PARMS 378: max_its = 5 378: max_feval = 5 378: BSPLINE XFORM HEADER 378: vox_per_rgn = 4 4 4 378: roi_offset = 0 0 0 378: roi_dim = 19 19 19 378: img_dc = 1 0 0 0 1 0 0 0 1 378: BST METRICS 378: MET 110100 MSE 1.000000 378: Setting nmax, mmax = 1536 41 378: >>> START 378: This problem is unconstrained. 378: [ 0, 0] SCORE 3407.677 NV 6859 GM 84.848 GN 25 [ 0.004 s ] 378: MSE 2961.435 LM 446.242 378: CMIN 0.00 CAVG 0.00 CMAX 0.00 378: LSD 0.00 378: [ 0, 1] SCORE 3361.326 NV 6859 GM 83.763 GN 24.7 [ 0.004 s ] 378: MSE 2923.708 LM 437.617 378: CMIN -0.50 CAVG -0.00 CMAX 0.07 378: LSD 1.00 378: [ 0, 2] SCORE 3181.879 NV 6859 GM 79.422 GN 23.5 [ 0.004 s ] 378: MSE 2777.757 LM 404.122 378: CMIN -2.48 CAVG -0.01 CMAX 0.34 378: LSD 5.00 378: [ 0, 3] SCORE 2557.441 NV 6859 GM 62.038 GN 18.9 [ 0.005 s ] 378: MSE 2271.265 LM 286.176 378: CMIN -10.41 CAVG -0.05 CMAX 1.44 378: LSD 21.00 378: [ 1, 4] SCORE 1117.771 NV 6859 GM -1.799 GN 6.83 [ 0.009 s ] 378: MSE 1009.222 LM 108.548 378: CMIN -45.97 CAVG -0.19 CMAX 12.05 378: LSD 76.81 378: [ 2, 5] SCORE 848.407 NV 6859 GM -12.697 GN 4.53 [ 0.005 s ] 378: MSE 667.771 LM 180.635 378: CMIN -54.81 CAVG -0.22 CMAX 17.65 378: LSD 34.30 378: [2] xf_out->m_type = 9, xf_in->m_type = 0 378: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 378: bspline_xform_initialize 378: rdims = (5,5,5) 378: vox_per_rgn = (8,8,8) 378: cdims = (8 8 8) 378: ** Registration worker thread finished. 378: Writing transformation ... 378: Warping... 378: Running: plm_warp_native 378: Converting input image... 378: Converting xform... 378: bspline_xform_initialize 378: rdims = (5,5,5) 378: vox_per_rgn = (8,8,8) 378: cdims = (8 8 8) 378: Creating output vf... 378: Creating output volume... 378: Running native warper... 378: bspline_warp complete. 378: Back convert to original type... 378: > Convert vf to itk 378: > Conversion complete. 378: plm_warp_native is complete. 378: Saving image... 378: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a-img.mha 378: Saving warped landmarks... 378: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a-warped.fcsv 378: Saving vf... 378: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-bsp-landmark-a-vf.mha 378: Load: 0.0586469 378: Run: 0.0394728 378: Save: 0.041224 378: Total: 0.139344 378: Finished! 378: 378: STDERR: 378: Not an error 567: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5a-stats.stdout.txt 567: -- REGEX is AVE *([-0-9.]*) 567: -- LOWER_THRESH is 0.26 567: -- UPPER_THRESH is 0.27 567: -- PARSED VALUE=|MIN 0.000000 AVE 0.266122 MAX 100.000000 NONZERO 932 NUMVOX 216000| 567: -- PARSED_VALUE=|0.266122| 567: Not an error 546/578 Test #378: plm-bsp-landmark-a .................... Passed 0.39 sec 419: RETVAL: 0 419: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha 419: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha 419: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha 419: Loading moving roi [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha 419: Launching registration worker thread 419: Inside registration worker thread 419: Doing registration stage 419: [1] xf_in->m_type = 0, xf_out->m_type = 0 419: [2] xf_out->m_type = 1, xf_in->m_type = 0 419: Doing registration stage 419: [1] xf_in->m_type = 1, xf_out->m_type = 0 419: Fixed image for this stage: 419: Dim = 15 25 15 419: Origin = -14 -24 -14 419: Spacing = 2 2 2 419: Direction Cosines = 419: 1 0 0 419: 0 1 0 419: 0 0 1 419: Moving image for this stage: 419: Dim = 15 25 15 419: Origin = -14 -24 -14 419: Spacing = 2 2 2 419: Direction Cosines = 419: 1 0 0 419: 0 1 0 419: 0 0 1 419: Initial Parameters = [0, 0, 0] 419: Starting ITK registration 419: StartEvent: [0, 0, 0] 419: EndEvent: [0, 0, 0] 419: RegularStepGradientDescentOptimizer: Gradient magnitude tolerance met after 0 iterations. Gradient magnitude (0) is less than gradient magnitude tolerance (0.0001). 419: ITK registration complete 419: [2] xf_out->m_type = 1, xf_in->m_type = 1 419: ** Registration worker thread finished. 419: Writing transformation ... 419: Warping... 419: plm_warp_itk: xform_to_itk_vf 419: plm_warp_itk: convert_to_itk 419: plm_warp_itk: warping... 419: Saving image... 419: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b-img.mha 419: Saving vf... 419: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-b-vf.mha 419: Load: 0.05547 419: Run: 0.0301759 419: Save: 0.0126631 419: Total: 0.098309 419: Finished! 419: 419: STDERR: 547/578 Test #567: proton-dose-5a-check .................. Passed 0.03 sec 419: Not an error 548/578 Test #419: plm-reg-roi-b ......................... Passed 0.32 sec 445: RETVAL: 0 445: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-vf.mha) 445: Setting PIH from VF 445: PIH is: 445: Origin = -25.0000 -25.0000 -25.0000 445: Size = 38 38 38 445: Spacing = 1.3158 1.3158 1.3158 445: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 445: Rt_study_warp: Warping m_img 445: plm_warp_itk: xform_to_itk_vf 445: plm_warp_itk: convert_to_itk 445: plm_warp_itk: warping... 445: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha) 445: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-a-warp.mha 445: Rt_study_warp: warp and save ss. 445: Finished! 445: 445: STDERR: 445: Not an error 498: RETVAL: 0 498: STDOUT: bspline_xform_initialize 498: rdims = (5,5,5) 498: vox_per_rgn = (8,8,8) 498: cdims = (8 8 8) 498: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-a.fcsv 498: 498: STDERR: 549/578 Test #445: plm-compose-a-warp .................... Passed 0.28 sec 498: Not an error 449: RETVAL: 0 449: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-vf.mha) 449: Setting PIH from VF 449: PIH is: 449: Origin = -25.0000 -25.0000 -25.0000 449: Size = 38 38 38 449: Spacing = 1.3158 1.3158 1.3158 449: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 449: Rt_study_warp: Warping m_img 449: plm_warp_itk: xform_to_itk_vf 449: plm_warp_itk: convert_to_itk 449: plm_warp_itk: warping... 449: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha) 449: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-b-warp.mha 449: Rt_study_warp: warp and save ss. 449: Finished! 449: 449: STDERR: 449: Not an error 550/578 Test #498: plm-warp-pointset-a ................... Passed 0.20 sec 551/578 Test #449: plm-compose-b-warp .................... Passed 0.28 sec 453: RETVAL: 0 453: STDOUT: Loading xform (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-vf.mha) 453: Setting PIH from VF 453: PIH is: 453: Origin = -25.0000 -25.0000 -25.0000 453: Size = 38 38 38 453: Spacing = 1.3158 1.3158 1.3158 453: Direction = 1.0000 0.0000 0.0000 0.0000 1.0000 0.0000 0.0000 0.0000 1.0000 453: Rt_study_warp: Warping m_img 453: plm_warp_itk: xform_to_itk_vf 453: plm_warp_itk: convert_to_itk 453: plm_warp_itk: warping... 453: Rt_study_warp: Saving m_img (/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha) 453: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-compose-c-warp.mha 453: Rt_study_warp: warp and save ss. 453: Finished! 453: 453: STDERR: 453: Not an error 552/578 Test #453: plm-compose-c-warp .................... Passed 0.28 sec 529: RETVAL: 0 529: STDOUT: bspline_xform_initialize 529: rdims = (1,1,1) 529: vox_per_rgn = (4,4,4) 529: cdims = (4 4 4) 529: about to xform_convert 529: Converting to (itk) vector field 529: did xform_convert 529: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-c-vf.mha 529: 529: STDERR: 529: Not an error 553/578 Test #529: plm-xf-convert-c ...................... Passed 0.21 sec 499: RETVAL: 0 499: STDOUT: bspline_xform_initialize 499: rdims = (5,5,5) 499: vox_per_rgn = (8,8,8) 499: cdims = (8 8 8) 499: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-pointset-b.txt 499: 499: STDERR: 499: Not an error 554/578 Test #499: plm-warp-pointset-b ................... Passed 0.28 sec 500: RETVAL: 0 500: STDOUT: Trying to save: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-warp-landmark-c.fcsv 500: 500: STDERR: 500: Not an error 555/578 Test #500: plm-warp-pointset-c ................... Passed 0.29 sec 568: RETVAL: 0 568: STDOUT: 568: [PLAN] 568: patient : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha 568: target : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/ptv-1.mha 568: dose_out : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.mha 568: debug : 0 568: dose norm : 100 568: 568: [SETTINGS] 568: flavor: d ** 568: homo_approx: n ** 568: ray_step: 1 ** 568: aperture_out: ** 568: proj_dose_out: ** 568: proj_img_out: ** 568: range_comp_out: ** 568: sigma_out: ** 568: wed_out: ** 568: beam_weight: 1 ** 568: 568: [GEOMETRY & APERTURE] 568: source: 0 -2000 0 ** 568: isocenter: 0 0 0 ** 568: vup: 0 0 1 ** 568: offset: 1500 ** 568: ap_center in pixels: 20 20 ** 568: i_res: 41 41 ** 568: spacing: 3.75 3.75 ** 568: source_size: 0 ** 568: ap_file_in: ** 568: rc_file_in: ** 568: smearing: 5 ** 568: 568: [PEAK] 568: E0: P0 568: spread: P0 568: weight: P0 568: 568: Start dose calculation Beam 1 568: Plan_calc::compute_beam_dose(beam) entry -- 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: Priority 5. Target detected. 568: Compute target wepl_min_max... 568: Apply lateral smearing to the target... 568: Smearing = 5.000000, Smearing_ap = 3.750000 568: Strel size = (1,1), (3,3) 568: 0 1 0 568: 1 1 1 568: 0 1 0 568: Apply proximal and distal ... 568: Compute max wed... 568: Compute the aperture... 568: Max wed in the target is 117.554 mm. 568: Min wed in the target is 88.5523 mm. 568: Min and max depths in the PTV (target + margins): 88.5523 mm and 117.554 mm. 568: Min and max energies for treating the PTV: 109 MeV and 130 MeV. 568: 568: 22 Mono-energetic BP used: 568: 130 129 128 127 126 125 124 123 122 121 120 119 118 117 116 115 114 113 112 111 110 109 568: Optimization of the particle number map for any mono-energetic slice in progress... 568: Adding peak to sobp (130.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (129.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (128.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (127.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (126.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (125.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (124.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (123.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (122.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (121.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (120.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (119.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (118.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (117.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (116.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (115.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (114.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (113.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (112.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (111.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (110.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: Adding peak to sobp (109.000000, 1.000000, 1.000000) [0.010000, 140.000000] 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.87445 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.87445 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.86823 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.86823 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.81247 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.81247 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.80639 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.80639 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.74919 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.74919 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.69289 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.69289 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.68596 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.68596 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.62886 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.62886 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.57127 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.57127 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.56307 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.56307 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.50537 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.50537 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.49685 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.49685 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.4384 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.4384 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.42949 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.42949 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.37035 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.37035 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.36098 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.36098 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.30119 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.30119 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.29132 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.29132 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.23096 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.23096 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.22053 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.22053 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.15969 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.15969 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: sigma_img: 41 41 302 568: dim: 41 41 302 568: Sigma patient computed - sigma_pt_max = 2.14863 mm. 568: Sigma source computed - sigma_src_max = 0 mm. (Source size <= 0) 568: Sigma range compensator computed - sigma_rc_max = 0 mm. 568: Global sigma computed - Global sigma_max = 2.14863 mm. 568: Setting RVRTS = 1 568: FPD = 347.500001, BPD = 649.116731 568: 41 41 302 568: Raw dose at the maximum (0, 5, 0) : 10.689 A.U. 568: Dose normalized at the maximum to 1 x 100%. 568: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm 568: Trying to write mebs in /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d-pn.txt 568: Ap 41 41 568: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.mha 568: Sigma: 0.189707 seconds 568: Calc: 3.471136 seconds 568: IO: 0.268645 seconds 568: Reformat: 0.025131 seconds 568: Misc: 0.079666 seconds 568: done. 568: 568: Total execution time : 4.034587 seconds. 568: 568: STDERR: 568: Not an error 556/578 Test #568: proton-dose-5d ........................ Passed 4.74 sec test 569 Start 569: proton-dose-5d-stats 569: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-5d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 569: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 569: Test timeout computed to be: 1500 test 574 Start 574: proton-dose-8d 574: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-8d" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 574: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 574: Test timeout computed to be: 1500 420: RETVAL: 0 420: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha 420: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha 420: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-01.mha 420: Launching registration worker thread 420: Inside registration worker thread 420: Doing registration stage 420: [1] xf_in->m_type = 0, xf_out->m_type = 0 420: RESAMPLE 1 1: (2 2 2), (2 2 2) 420: RESAMPLE 1 1: (2 2 2), (2 2 2) 420: volume_calc_grad complete. 420: bspline_xform_initialize 420: rdims = (3,5,3) 420: vox_per_rgn = (5,5,5) 420: cdims = (6 8 6) 420: Algorithm flavor = g 420: Threading = 0 420: Regularization: flavor = c lambda = 0.100000 420: Regularizer initialized 420: >> Checking JH allocation 420: BSPLINE PARMS 420: max_its = 10 420: max_feval = 10 420: BSPLINE XFORM HEADER 420: vox_per_rgn = 5 5 5 420: roi_offset = 0 0 0 420: roi_dim = 15 25 15 420: img_dc = 1 0 0 0 1 0 0 0 1 420: BST METRICS 420: MET 110110 MSE 1.000000 420: Setting nmax, mmax = 864 31 420: >>> START 420: This problem is unconstrained. 420: [ 0, 0] SCORE 0.0000000 NV 1690 GM 0.000 GN 0 [ 0.068 s ] 420: MSE 0.0000000 RM 0.000 [ 0.038 | 0.030 ] 420: CMIN 0.00 CAVG 0.00 CMAX 0.00 420: LSD 0.00 420: * * * 420: 420: Tit = total number of iterations 420: Tnf = total number of function evaluations 420: Tnint = total number of segments explored during Cauchy searches 420: Skip = number of BFGS updates skipped 420: Nact = number of active bounds at final generalized Cauchy point 420: Projg = norm of the final projected gradient 420: F = final function value 420: 420: * * * 420: N Tit Tnf Tnint Skip Nact Projg F 420: 864 0 1 0 0 0 0 0 420: CONVERGENCE: NORM_OF_PROJECTED_GRADIENT_<=_PGTOL 420: Total User time 0 seconds. 420: [2] xf_out->m_type = 9, xf_in->m_type = 0 420: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 420: bspline_xform_initialize 420: rdims = (3,5,3) 420: vox_per_rgn = (10,10,10) 420: cdims = (6 8 6) 420: ** Registration worker thread finished. 420: Writing transformation ... 420: Warping... 420: Running: plm_warp_native 420: Converting input image... 420: Converting xform... 420: bspline_xform_initialize 420: rdims = (3,5,3) 420: vox_per_rgn = (10,10,10) 420: cdims = (6 8 6) 420: Creating output vf... 420: Creating output volume... 420: Running native warper... 420: bspline_warp complete. 420: Back convert to original type... 420: > Convert vf to itk 420: > Conversion complete. 420: plm_warp_native is complete. 420: Saving image... 420: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c-img.mha 420: Saving vf... 420: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-c-vf.mha 420: Load: 0.083854 420: Run: 0.0812862 420: Save: 0.0462599 420: Total: 0.2114 420: Finished! 420: 420: STDERR: 420: Not an error 557/578 Test #420: plm-reg-roi-c ......................... Passed 0.49 sec 574: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 574: PARMS is dose;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.txt 574: EXPECTED_ERRNO is 569: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 569: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d.mha 569: EXPECTED_ERRNO is 111: RETVAL: 0 111: STDOUT: Reconstructing... 111: Processing image 0 111: Processing image 1 111: Processing image 2 111: Processing image 3 111: Processing image 4 111: Processing image 5 111: Processing image 6 111: Processing image 7 111: Processing image 8 111: Processing image 9 111: Processing image 10 111: Processing image 11 111: Processing image 12 111: Processing image 13 111: Processing image 14 111: Processing image 15 111: Processing image 16 111: Processing image 17 111: Processing image 18 111: Processing image 19 111: I/O time (total) = 0.00642848 111: I/O time (per image) = 0.000321424 111: Filter time = 0 111: Filter time (per image) = 0 111: Backprojection time = 4.17246 111: Backprojection time (per image) = 0.208623 111: Writing output volume(s)... 111: done. 111: 111: 111: STDERR: 111: Not an error 558/578 Test #111: fdk-cpu-d ............................. Passed 4.83 sec test 112 Start 112: fdk-cpu-d-stats 112: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=fdk-cpu-d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 112: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 112: Test timeout computed to be: 1500 537: RETVAL: 0 537: STDOUT: Loading fixed... 537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146147.1771237091.957358RTDOSE 537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146147.1771237091.957359RTSTRUCT 537: Found DCM_ReferencedFrameOfReferenceSequence! 537: Found DCM_RTReferencedStudySequence! 537: Trying to load rt dose. 537: Load: DoseGridScaling = 0.000000 537: RTDOSE: dim = 38 38 38 537: ipp = -243.421005 -243.421005 -243.421005 537: spc = 13.157900 13.157900 13.157900 537: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 537: Bits_alloc: 32 537: Bits_stored: 32 537: High_bit: 31 537: Pixel_rep: 0 537: rc = 1, length = 109744, npix = 54872 537: Trying to load rt structure set. 537: Adding structure (1), Foreground 537: Structure 1 has color 255\0\0 537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146147.1771237091.957358RTDOSE 537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146147.1771237091.957359RTSTRUCT 537: Found DCM_ReferencedFrameOfReferenceSequence! 537: Found DCM_RTReferencedStudySequence! 537: Trying to load rt dose. 537: Load: DoseGridScaling = 0.000000 537: RTDOSE: dim = 38 38 38 537: ipp = -243.421005 -243.421005 -243.421005 537: spc = 13.157900 13.157900 13.157900 537: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 537: Bits_alloc: 32 537: Bits_stored: 32 537: High_bit: 31 537: Pixel_rep: 0 537: rc = 1, length = 109744, npix = 54872 537: Trying to load rt structure set. 537: Adding structure (1), Foreground 537: Structure 1 has color 255\0\0 537: Loading moving... 537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916104RTDOSE 537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916105RTSTRUCT 537: Found DCM_ReferencedFrameOfReferenceSequence! 537: Found DCM_RTReferencedStudySequence! 537: Trying to load rt dose. 537: Load: DoseGridScaling = 0.000000 537: RTDOSE: dim = 38 38 38 537: ipp = -243.421005 -243.421005 -243.421005 537: spc = 13.157900 13.157900 13.157900 537: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 537: Bits_alloc: 32 537: Bits_stored: 32 537: High_bit: 31 537: Pixel_rep: 0 537: rc = 1, length = 109744, npix = 54872 537: Trying to load rt structure set. 537: Adding structure (1), Foreground 537: Structure 1 has color 255\0\0 537: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916104RTDOSE 537: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916105RTSTRUCT 537: Found DCM_ReferencedFrameOfReferenceSequence! 537: Found DCM_RTReferencedStudySequence! 537: Trying to load rt dose. 537: Load: DoseGridScaling = 0.000000 537: RTDOSE: dim = 38 38 38 537: ipp = -243.421005 -243.421005 -243.421005 537: spc = 13.157900 13.157900 13.157900 537: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 537: Bits_alloc: 32 537: Bits_stored: 32 537: High_bit: 31 537: Pixel_rep: 0 537: rc = 1, length = 109744, npix = 54872 537: Trying to load rt structure set. 537: Adding structure (1), Foreground 537: Structure 1 has color 255\0\0 537: Saving sro 537: ITK_AFF_OFF 537: 20.000000 0.000000 0.000000 537: SRO 537: 1.000000\0.000000\0.000000\-20.000000\0.000000\1.000000\0.000000\-0.000000\0.000000\0.000000\1.000000\-0.000000\0.0\0.0\0.0\1.0 537: Trying to save SRO: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-e/sro.dcm 537: Done saving sro 537: 537: STDERR: 537: Not an error 559/578 Test #537: plm-xf-convert-e ...................... Passed 0.39 sec 112: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 112: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d.mha 112: EXPECTED_ERRNO is 538: RETVAL: 0 538: STDOUT: Loading fixed... 538: Loading moving... 538: Saving sro 538: ITK_AFF_OFF 538: 20.000000 0.000000 0.000000 538: SRO 538: 1.000000\0.000000\0.000000\-20.000000\0.000000\1.000000\0.000000\-0.000000\0.000000\0.000000\1.000000\-0.000000\0.0\0.0\0.0\1.0 538: Trying to save SRO: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-f/sro.dcm 538: Done saving sro 538: 538: STDERR: 538: Not an error 560/578 Test #538: plm-xf-convert-f ...................... Passed 0.42 sec 442: RETVAL: 0 442: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-2.mha 442: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-3.mha 442: Loading fixed pointset [1]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-convert-prefix-fcsv/sphere-7.fcsv 442: Loading moving image [1]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-dmap-b.mha 442: Launching registration worker thread 442: Inside registration worker thread 442: Doing registration stage 442: [1] xf_in->m_type = 0, xf_out->m_type = 0 442: RESAMPLE 1 1: (1 1 1), (1 1 1) 442: RESAMPLE 1 1: (1 1 1), (1 1 1) 442: volume_calc_grad complete. 442: RESAMPLE 1 1: (1 1 1), (1 1 1) 442: volume_calc_grad complete. 442: bspline_xform_initialize 442: Warning: vox_per_rgn was less than 4. 442: Warning: vox_per_rgn was less than 4. 442: Warning: vox_per_rgn was less than 4. 442: rdims = (10,10,10) 442: vox_per_rgn = (4,4,4) 442: cdims = (13 13 13) 442: Algorithm flavor = g 442: Threading = 0 442: >> Checking JH allocation 442: BSPLINE PARMS 442: max_its = 5 442: max_feval = 5 442: BSPLINE XFORM HEADER 442: vox_per_rgn = 4 4 4 442: roi_offset = 0 0 0 442: roi_dim = 38 38 38 442: img_dc = 1 0 0 0 1 0 0 0 1 442: BST METRICS 442: MET 110100 MSE 1.000000 442: MET 010100 PDM 30.000000 442: Setting nmax, mmax = 6591 83 442: >>> START 442: This problem is unconstrained. 442: [ 0, 0] SCORE 5752.552 NV 54872 GM 5.543 GN 45.1 [ 0.039 s ] 442: MSE 5540.166 PDM 7.0795197 CMIN 0.00 CAVG 0.00 CMAX 0.00 442: LSD 0.00 442: [ 0, 1] SCORE 5663.708 NV 54872 GM 0.170 GN 43.8 [ 0.033 s ] 442: MSE 5452.803 PDM 7.0301509 CMIN -0.20 CAVG -0.00 CMAX 0.16 442: LSD 1.00 442: [ 0, 2] SCORE 5319.446 NV 54872 GM -0.447 GN 42 [ 0.036 s ] 442: MSE 5114.376 PDM 6.8356566 CMIN -1.00 CAVG -0.00 CMAX 0.78 442: LSD 5.00 442: [ 0, 3] SCORE 4111.230 NV 54872 GM -2.786 GN 35.2 [ 0.024 s ] 442: MSE 3928.063 PDM 6.1055741 CMIN -4.21 CAVG -0.00 CMAX 3.26 442: LSD 21.00 442: [ 1, 4] SCORE 1404.270 NV 54872 GM 1.576 GN 10.3 [ 0.026 s ] 442: MSE 1228.705 PDM 5.8521819 CMIN -19.53 CAVG 0.01 CMAX 16.23 442: LSD 76.08 442: [ 2, 5] SCORE 1282.464 NV 54872 GM 13.580 GN 4.68 [ 0.029 s ] 442: MSE 1058.280 PDM 7.4727950 CMIN -25.04 CAVG 0.01 CMAX 19.49 442: LSD 32.00 442: [2] xf_out->m_type = 9, xf_in->m_type = 0 442: ** Registration worker thread finished. 442: Warping... 442: Running: plm_warp_native 442: Converting input image... 442: Converting xform... 442: bspline_xform_initialize 442: rdims = (10,10,10) 442: vox_per_rgn = (4,4,4) 442: cdims = (13 13 13) 442: Creating output vf... 442: Creating output volume... 442: Running native warper... 442: bspline_warp complete. 442: Back convert to original type... 442: > Convert vf to itk 442: > Conversion complete. 442: plm_warp_native is complete. 442: Saving image... 442: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a-img.nrrd 442: Saving vf... 442: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-point-dmap-a-vf.nrrd 442: Load: 0.0740681 442: Run: 0.195914 442: Save: 0.13571 442: Total: 0.405692 442: Finished! 442: 442: STDERR: 442: Not an error 561/578 Test #442: plm-reg-point-dmap-a .................. Passed 0.64 sec 569: RETVAL: 0 569: STDOUT: MIN 0.000000 AVE 0.386816 MAX 100.000000 NONZERO 3614 NUMVOX 216000 569: 569: STDERR: 569: Not an error 562/578 Test #569: proton-dose-5d-stats .................. Passed 0.27 sec test 570 Start 570: proton-dose-5d-check 570: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d-stats.stdout.txt" "-DREGEX=AVE *([-0-9.]*)" "-DLOWER_THRESH=0.38" "-DUPPER_THRESH=0.39" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 570: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 570: Test timeout computed to be: 1500 418: RETVAL: 0 418: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10.mha 418: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11.mha 418: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-10-roi-1.mha 418: Loading moving roi [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-11-roi.mha 418: Launching registration worker thread 418: Inside registration worker thread 418: Doing registration stage 418: [1] xf_in->m_type = 0, xf_out->m_type = 0 418: RESAMPLE 1 1: (1 1 1), (1 1 1) 418: RESAMPLE 1 1: (1 1 1), (1 1 1) 418: volume_calc_grad complete. 418: bspline_xform_initialize 418: Warning: vox_per_rgn was less than 4. 418: Warning: vox_per_rgn was less than 4. 418: Warning: vox_per_rgn was less than 4. 418: rdims = (10,10,10) 418: vox_per_rgn = (4,4,4) 418: cdims = (13 13 13) 418: Algorithm flavor = h 418: Threading = 0 418: >> Checking JH allocation 418: >> Performing JH allocation 418: BSPLINE PARMS 418: max_its = 5 418: max_feval = 5 418: BSPLINE XFORM HEADER 418: vox_per_rgn = 4 4 4 418: roi_offset = 0 0 0 418: roi_dim = 38 38 38 418: img_dc = 1 0 0 0 1 0 0 0 1 418: BST METRICS 418: MET 110111 MI 1.000000 418: >> Performing JH initialization 418: Setting nmax, mmax = 6591 83 418: >>> START 418: This problem is unconstrained. 418: [ 0, 0] MI -0.0060547 NV 729 GM 0.008 GN 0.0011 [ 0.135 s ] 418: CMIN 0.01 CAVG 0.01 CMAX 0.01 418: LSD 0.00 418: [ 0, 1] MI -0.0496013 NV 569 GM -0.020 GN 0.00349 [ 0.079 s ] 418: CMIN -0.30 CAVG 0.01 CMAX 0.04 418: LSD 1.00 418: [ 1, 2] MI -0.0061482 NV 729 GM 0.000 GN 0.00024 [ 0.060 s ] 418: CMIN -0.30 CAVG 0.01 CMAX 0.05 418: LSD 0.25 418: [ 1, 3] MI -0.0496042 NV 569 GM -0.020 GN 0.00349 [ 0.065 s ] 418: CMIN -0.30 CAVG 0.01 CMAX 0.04 418: LSD 0.00 418: [ 1, 4] MI -0.0496071 NV 569 GM -0.020 GN 0.00349 [ 0.034 s ] 418: CMIN -0.30 CAVG 0.01 CMAX 0.04 418: LSD 0.00 418: [ 1, 5] MI -0.0020808 NV 629 GM -0.002 GN 0.000318 [ 0.044 s ] 418: CMIN -0.30 CAVG 0.01 CMAX 0.05 418: LSD 0.12 418: [2] xf_out->m_type = 9, xf_in->m_type = 0 418: ** Registration worker thread finished. 418: Writing transformation ... 418: Warping... 418: Running: plm_warp_native 418: Converting input image... 418: Converting xform... 418: bspline_xform_initialize 418: rdims = (10,10,10) 418: vox_per_rgn = (4,4,4) 418: cdims = (13 13 13) 418: Creating output vf... 418: Creating output volume... 418: Running native warper... 418: bspline_warp complete. 418: Back convert to original type... 418: > Convert vf to itk 418: > Conversion complete. 418: plm_warp_native is complete. 418: Saving image... 418: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a-img.mha 418: Saving vf... 418: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-a-vf.mha 418: Load: 0.050302 418: Run: 0.428946 418: Save: 0.048933 418: Total: 0.528181 418: Finished! 418: 418: STDERR: 418: Not an error 563/578 Test #418: plm-reg-roi-a ......................... Passed 0.75 sec 570: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-5d-stats.stdout.txt 570: -- REGEX is AVE *([-0-9.]*) 570: -- LOWER_THRESH is 0.38 570: -- UPPER_THRESH is 0.39 570: -- PARSED VALUE=|MIN 0.000000 AVE 0.386816 MAX 100.000000 NONZERO 3614 NUMVOX 216000| 570: -- PARSED_VALUE=|0.386816| 570: Not an error 564/578 Test #570: proton-dose-5d-check .................. Passed 0.03 sec 539: RETVAL: 0 539: STDOUT: Loading fixed... 539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916104RTDOSE 539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916105RTSTRUCT 539: Found DCM_ReferencedFrameOfReferenceSequence! 539: Found DCM_RTReferencedStudySequence! 539: Trying to load rt dose. 539: Load: DoseGridScaling = 0.000000 539: RTDOSE: dim = 38 38 38 539: ipp = -243.421005 -243.421005 -243.421005 539: spc = 13.157900 13.157900 13.157900 539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 539: Bits_alloc: 32 539: Bits_stored: 32 539: High_bit: 31 539: Pixel_rep: 0 539: rc = 1, length = 109744, npix = 54872 539: Trying to load rt structure set. 539: Adding structure (1), Foreground 539: Structure 1 has color 255\0\0 539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916104RTDOSE 539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146141.1771237091.916105RTSTRUCT 539: Found DCM_ReferencedFrameOfReferenceSequence! 539: Found DCM_RTReferencedStudySequence! 539: Trying to load rt dose. 539: Load: DoseGridScaling = 0.000000 539: RTDOSE: dim = 38 38 38 539: ipp = -243.421005 -243.421005 -243.421005 539: spc = 13.157900 13.157900 13.157900 539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 539: Bits_alloc: 32 539: Bits_stored: 32 539: High_bit: 31 539: Pixel_rep: 0 539: rc = 1, length = 109744, npix = 54872 539: Trying to load rt structure set. 539: Adding structure (1), Foreground 539: Structure 1 has color 255\0\0 539: Loading moving... 539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146147.1771237091.957358RTDOSE 539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146147.1771237091.957359RTSTRUCT 539: Found DCM_ReferencedFrameOfReferenceSequence! 539: Found DCM_RTReferencedStudySequence! 539: Trying to load rt dose. 539: Load: DoseGridScaling = 0.000000 539: RTDOSE: dim = 38 38 38 539: ipp = -243.421005 -243.421005 -243.421005 539: spc = 13.157900 13.157900 13.157900 539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 539: Bits_alloc: 32 539: Bits_stored: 32 539: High_bit: 31 539: Pixel_rep: 0 539: rc = 1, length = 109744, npix = 54872 539: Trying to load rt structure set. 539: Adding structure (1), Foreground 539: Structure 1 has color 255\0\0 539: Found RTDOSE, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146147.1771237091.957358RTDOSE 539: Found RTSTUCT, UID=1.2.826.0.1.3680043.8.274.1.1.8323329.1146147.1771237091.957359RTSTRUCT 539: Found DCM_ReferencedFrameOfReferenceSequence! 539: Found DCM_RTReferencedStudySequence! 539: Trying to load rt dose. 539: Load: DoseGridScaling = 0.000000 539: RTDOSE: dim = 38 38 38 539: ipp = -243.421005 -243.421005 -243.421005 539: spc = 13.157900 13.157900 13.157900 539: dc = 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 539: Bits_alloc: 32 539: Bits_stored: 32 539: High_bit: 31 539: Pixel_rep: 0 539: rc = 1, length = 109744, npix = 54872 539: Trying to load rt structure set. 539: Adding structure (1), Foreground 539: Structure 1 has color 255\0\0 539: Saving sro 539: Trying to save SRO: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-xf-convert-g/dro.dcm 539: Done saving sro 539: 539: STDERR: 539: Not an error 423: RETVAL: 0 423: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-19.mha 423: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/sphere-4.mha 423: Loading fixed stiffness: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/roi-1.mha 423: Launching registration worker thread 423: Inside registration worker thread 423: Doing registration stage 423: [1] xf_in->m_type = 0, xf_out->m_type = 0 423: RESAMPLE 1 1: (2 2 2), (2 2 2) 423: RESAMPLE 1 1: (2 2 2), (2 2 2) 423: volume_calc_grad complete. 423: bspline_xform_initialize 423: Warning: vox_per_rgn was less than 4. 423: Warning: vox_per_rgn was less than 4. 423: Warning: vox_per_rgn was less than 4. 423: rdims = (5,5,5) 423: vox_per_rgn = (4,4,4) 423: cdims = (8 8 8) 423: RESAMPLE 1 1: (2 2 2), (2 2 2) 423: Algorithm flavor = g 423: Threading = 0 423: Regularization: flavor = a lambda = 0.100000 423: >> Checking JH allocation 423: BSPLINE PARMS 423: max_its = 5 423: max_feval = 5 423: BSPLINE XFORM HEADER 423: vox_per_rgn = 4 4 4 423: roi_offset = 0 0 0 423: roi_dim = 19 19 19 423: img_dc = 1 0 0 0 1 0 0 0 1 423: BST METRICS 423: MET 110100 MSE 1.000000 423: Setting nmax, mmax = 1536 41 423: >>> START 423: This problem is unconstrained. 423: [ 0, 0] SCORE 74227.273 NV 6859 GM 0.000 GN 188 [ 0.122 s ] 423: MSE 74227.273 RM 0.000 [ 0.029 | 0.093 ] 423: CMIN 0.00 CAVG 0.00 CMAX 0.00 423: LSD 0.00 423: [ 0, 1] SCORE 73948.398 NV 6859 GM 0.045 GN 187 [ 0.072 s ] 423: MSE 73948.391 RM 0.010 [ 0.022 | 0.051 ] 423: CMIN -0.14 CAVG -0.00 CMAX 0.15 423: LSD 1.00 423: [ 0, 2] SCORE 72846.922 NV 6859 GM 0.264 GN 183 [ 0.071 s ] 423: MSE 72846.680 RM 0.242 [ 0.026 | 0.045 ] 423: CMIN -0.69 CAVG -0.00 CMAX 0.76 423: LSD 5.00 423: [ 0, 3] SCORE 68660.922 NV 6859 GM 1.168 GN 166 [ 0.058 s ] 423: MSE 68656.656 RM 4.268 [ 0.020 | 0.038 ] 423: CMIN -2.91 CAVG -0.00 CMAX 3.18 423: LSD 21.00 423: [ 1, 4] SCORE 42095.320 NV 6859 GM -11.876 GN 58.8 [ 0.065 s ] 423: MSE 41780.070 RM 315.248 [ 0.022 | 0.043 ] 423: CMIN -25.44 CAVG -0.01 CMAX 25.37 423: LSD 160.09 423: [ 2, 5] SCORE 33075.488 NV 6859 GM 41.190 GN 77.9 [ 0.059 s ] 423: MSE 32300.393 RM 775.097 [ 0.019 | 0.040 ] 423: CMIN -39.12 CAVG 0.00 CMAX 38.06 423: LSD 114.34 423: [2] xf_out->m_type = 9, xf_in->m_type = 0 423: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 423: bspline_xform_initialize 423: rdims = (5,5,5) 423: vox_per_rgn = (8,8,8) 423: cdims = (8 8 8) 423: ** Registration worker thread finished. 423: Writing transformation ... 423: Warping... 423: Running: plm_warp_native 423: Converting input image... 423: Converting xform... 423: bspline_xform_initialize 423: rdims = (5,5,5) 423: vox_per_rgn = (8,8,8) 423: cdims = (8 8 8) 423: Creating output vf... 423: Creating output volume... 423: Running native warper... 423: bspline_warp complete. 423: Back convert to original type... 423: > Convert vf to itk 423: > Conversion complete. 423: plm_warp_native is complete. 423: Saving image... 423: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a-img.mha 423: Saving vf... 423: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-stiffness-a-vf.mha 423: Load: 0.0707328 423: Run: 0.464514 423: Save: 0.0405781 423: Total: 0.575825 423: Finished! 423: 423: STDERR: 423: Not an error 421: RETVAL: 0 421: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha 421: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha 421: Loading fixed roi [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-m-02.mha 421: Launching registration worker thread 421: Inside registration worker thread 421: Doing registration stage 421: [1] xf_in->m_type = 0, xf_out->m_type = 0 421: RESAMPLE 1 1: (2 2 2), (2 2 2) 421: RESAMPLE 1 1: (2 2 2), (2 2 2) 421: volume_calc_grad complete. 421: bspline_xform_initialize 421: rdims = (3,5,3) 421: vox_per_rgn = (5,5,5) 421: cdims = (6 8 6) 421: Algorithm flavor = g 421: Threading = 0 421: Regularization: flavor = c lambda = 0.100000 421: Regularizer initialized 421: >> Checking JH allocation 421: BSPLINE PARMS 421: max_its = 10 421: max_feval = 10 421: BSPLINE XFORM HEADER 421: vox_per_rgn = 5 5 5 421: roi_offset = 0 0 0 421: roi_dim = 15 25 15 421: img_dc = 1 0 0 0 1 0 0 0 1 421: BST METRICS 421: MET 110110 MSE 1.000000 421: Setting nmax, mmax = 864 31 421: >>> START 421: This problem is unconstrained. 421: [ 0, 0] SCORE 66568.047 NV 1690 GM 14792.900 GN 3.94e+03 [ 0.077 s ] 421: MSE 66568.047 RM 0.000 [ 0.034 | 0.042 ] 421: CMIN 0.00 CAVG 0.00 CMAX 0.00 421: LSD 0.00 421: [ 0, 1] SCORE 60779.625 NV 1690 GM 13427.228 GN 3.59e+03 [ 0.071 s ] 421: MSE 60779.609 RM 0.015 [ 0.036 | 0.035 ] 421: CMIN -0.46 CAVG -0.00 CMAX 0.10 421: LSD 1.00 421: [ 0, 2] SCORE 43202.340 NV 1690 GM 16992.866 GN 4.39e+03 [ 0.058 s ] 421: MSE 43201.965 RM 0.376 [ 0.029 | 0.028 ] 421: CMIN -2.30 CAVG -0.02 CMAX 0.50 421: LSD 5.00 421: [ 0, 3] SCORE 11325.080 NV 1619 GM -932.100 GN 1.45e+03 [ 0.053 s ] 421: MSE 11318.452 RM 6.628 [ 0.024 | 0.029 ] 421: CMIN -9.66 CAVG -0.09 CMAX 2.11 421: LSD 21.00 421: [ 1, 4] SCORE 5165.491 NV 1647 GM 1195.560 GN 605 [ 0.048 s ] 421: MSE 5160.030 RM 5.461 [ 0.029 | 0.019 ] 421: CMIN -7.99 CAVG -0.09 CMAX 1.46 421: LSD 4.95 421: [ 2, 5] SCORE 5370.420 NV 1649 GM -3582.381 GN 910 [ 0.043 s ] 421: MSE 5363.509 RM 6.911 [ 0.017 | 0.026 ] 421: CMIN -8.90 CAVG -0.10 CMAX 1.42 421: LSD 5.04 421: [ 2, 6] SCORE 4305.869 NV 1649 GM -1305.969 GN 395 [ 0.038 s ] 421: MSE 4299.880 RM 5.989 [ 0.014 | 0.023 ] 421: CMIN -7.75 CAVG -0.10 CMAX 1.44 421: LSD 2.37 421: [ 3, 7] SCORE 4280.987 NV 1653 GM 1734.354 GN 474 [ 0.039 s ] 421: MSE 4275.453 RM 5.534 [ 0.022 | 0.017 ] 421: CMIN -7.64 CAVG -0.09 CMAX 1.40 421: LSD 1.62 421: [ 4, 8] SCORE 4194.305 NV 1651 GM 205.505 GN 129 [ 0.035 s ] 421: MSE 4188.512 RM 5.794 [ 0.015 | 0.020 ] 421: CMIN -7.74 CAVG -0.10 CMAX 1.43 421: LSD 0.60 421: [ 5, 9] SCORE 4196.242 NV 1645 GM 115.154 GN 112 [ 0.031 s ] 421: MSE 4190.442 RM 5.800 [ 0.015 | 0.015 ] 421: CMIN -7.66 CAVG -0.10 CMAX 1.43 421: LSD 0.26 421: [ 5, 10] SCORE 4195.648 NV 1649 GM 201.989 GN 124 [ 0.021 s ] 421: MSE 4189.854 RM 5.795 [ 0.008 | 0.013 ] 421: CMIN -7.72 CAVG -0.10 CMAX 1.43 421: LSD 0.06 421: [2] xf_out->m_type = 9, xf_in->m_type = 0 421: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 421: bspline_xform_initialize 421: rdims = (3,5,3) 421: vox_per_rgn = (10,10,10) 421: cdims = (6 8 6) 421: ** Registration worker thread finished. 421: Writing transformation ... 421: Warping... 421: Running: plm_warp_native 421: Converting input image... 421: Converting xform... 421: bspline_xform_initialize 421: rdims = (3,5,3) 421: vox_per_rgn = (10,10,10) 421: cdims = (6 8 6) 421: Creating output vf... 421: Creating output volume... 421: Running native warper... 421: bspline_warp complete. 421: Back convert to original type... 421: > Convert vf to itk 421: > Conversion complete. 421: plm_warp_native is complete. 421: Saving image... 421: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-d-img.mha 421: Saving vf... 421: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-d-vf.mha 421: Load: 0.057893 421: Run: 0.525786 421: Save: 0.028161 421: Total: 0.61184 421: Finished! 421: 421: STDERR: 565/578 Test #539: plm-xf-convert-g ...................... Passed 0.58 sec 421: Not an error 566/578 Test #421: plm-reg-roi-d ......................... Passed 0.82 sec 567/578 Test #423: plm-reg-stiffness-a ................... Passed 0.81 sec 422: RETVAL: 0 422: STDOUT: Loading fixed image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-01.mha 422: Loading moving image [0]: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rectarr-02.mha 422: Launching registration worker thread 422: Inside registration worker thread 422: Doing registration stage 422: [1] xf_in->m_type = 0, xf_out->m_type = 0 422: Fixed image for this stage: 422: Dim = 15 25 15 422: Origin = -14 -24 -14 422: Spacing = 2 2 2 422: Direction Cosines = 422: 1 0 0 422: 0 1 0 422: 0 0 1 422: Moving image for this stage: 422: Dim = 15 25 15 422: Origin = -14 -24 -14 422: Spacing = 2 2 2 422: Direction Cosines = 422: 1 0 0 422: 0 1 0 422: 0 0 1 422: Initial Parameters = [0, 0, 0] 422: Starting ITK registration 422: StartEvent: [0, 0, 0] 422: MSE [ 0, 0, 1.00] 20000.000 [-0.9999999727511648, 0.00023344735891123153, 0] 422: :: [0, 0, 0] 422: * 422: MSE [ 1, 1, 1.00] 16666.407 [-1.9999999583532024, 0.00006375373999510409, -1.0184177300406575e-17] -3333.59 422: :: [-0.9999999727511648, 0.00023344735891123153, 0] 422: * 422: MSE [ 2, 2, 1.00] 21428.450 [-2.9999999539450632, 0.00015764878267369732, 1.1988331301321566e-16] 4762.04 422: MSE [ 3, 3, 0.50] 17856.955 [-2.4999999789370184, -4.3965600468777325e-7, 1.3363734991268503e-16] -3571.49 422: MSE [ 4, 4, 0.50] 18749.999 [-1.9999999790242364, -0.000009778710908836102, 1.9323364181246773e-16] 893.04 422: MSE [ 5, 5, 0.25] 21428.553 [-2.2499999446638332, 0.00012129455271897703, 2.1274376341143324e-16] 2678.55 422: MSE [ 6, 6, 0.12] 19865.879 [-2.1250000509246822, -0.00004169379354036178, 2.2582084929206e-16] -1562.67 422: MSE [ 7, 7, 0.06] 20591.445 [-2.187499942399231, 0.00007477796101175552, 2.3619285107730225e-16] 725.57 422: MSE [ 8, 8, 0.03] 20214.720 [-2.1562503690872257, -0.00008852487918588618, 1.9519086807274486e-16] -376.73 422: MSE [ 9, 9, 0.02] 20399.540 [-2.1718751050913467, 0.000002303538879451012, 1.9662323051212797e-16] 184.82 422: EndEvent: [-2.1718751050913467, 0.000002303538879451012, 1.9662323051212797e-16] 422: RegularStepGradientDescentOptimizer: Maximum number of iterations (10) exceeded. 422: ITK registration complete 422: [2] xf_out->m_type = 1, xf_in->m_type = 0 422: Doing registration stage 422: [1] xf_in->m_type = 1, xf_out->m_type = 0 422: RESAMPLE 1 1: (2 2 2), (2 2 2) 422: RESAMPLE 1 1: (2 2 2), (2 2 2) 422: volume_calc_grad complete. 422: bspline_xform_initialize 422: rdims = (3,5,3) 422: vox_per_rgn = (5,5,5) 422: cdims = (6 8 6) 422: Algorithm flavor = g 422: Threading = 0 422: Regularization: flavor = c lambda = 0.100000 422: Regularizer initialized 422: >> Checking JH allocation 422: BSPLINE PARMS 422: max_its = 5 422: max_feval = 5 422: BSPLINE XFORM HEADER 422: vox_per_rgn = 5 5 5 422: roi_offset = 0 0 0 422: roi_dim = 15 25 15 422: img_dc = 1 0 0 0 1 0 0 0 1 422: BST METRICS 422: MET 110100 MSE 1.000000 422: Setting nmax, mmax = 864 31 422: >>> START 422: This problem is unconstrained. 422: [ 0, 0] SCORE 17856.865 NV 5250 GM 596.305 GN 997 [ 0.069 s ] 422: MSE 17856.865 RM 0.000 [ 0.035 | 0.034 ] 422: CMIN -1.00 CAVG -0.33 CMAX 0.00 422: LSD 0.00 422: [ 0, 1] SCORE 15761.621 NV 5415 GM 4002.270 GN 1.58e+03 [ 0.059 s ] 422: MSE 15761.603 RM 0.019 [ 0.033 | 0.026 ] 422: CMIN -1.35 CAVG -0.33 CMAX 0.11 422: LSD 1.00 422: [ 0, 2] SCORE 11419.833 NV 5415 GM 3904.956 GN 1.2e+03 [ 0.046 s ] 422: MSE 11419.360 RM 0.473 [ 0.020 | 0.026 ] 422: CMIN -2.76 CAVG -0.34 CMAX 0.57 422: LSD 5.00 422: [ 0, 3] SCORE 11865.492 NV 5349 GM 4432.436 GN 1.31e+03 [ 0.040 s ] 422: MSE 11857.157 RM 8.335 [ 0.018 | 0.022 ] 422: CMIN -8.39 CAVG -0.35 CMAX 4.37 422: LSD 21.00 422: [ 1, 4] SCORE 2624.840 NV 5330 GM 1520.288 GN 405 [ 0.044 s ] 422: MSE 2620.351 RM 4.489 [ 0.023 | 0.021 ] 422: CMIN -7.51 CAVG -0.37 CMAX 1.81 422: LSD 7.90 422: [ 2, 5] SCORE 2070.753 NV 5316 GM -1231.525 GN 432 [ 0.042 s ] 422: MSE 2064.967 RM 5.786 [ 0.021 | 0.022 ] 422: CMIN -8.62 CAVG -0.39 CMAX 1.40 422: LSD 4.35 422: [2] xf_out->m_type = 9, xf_in->m_type = 1 422: Doing registration stage 422: [1] xf_in->m_type = 9, xf_out->m_type = 0 422: RESAMPLE 1 1: (2 2 2), (2 2 2) 422: RESAMPLE 1 1: (2 2 2), (2 2 2) 422: volume_calc_grad complete. 422: bspline_xform_initialize 422: rdims = (3,5,3) 422: vox_per_rgn = (5,5,5) 422: cdims = (6 8 6) 422: Algorithm flavor = g 422: Threading = 0 422: Regularization: flavor = c lambda = 0.100000 422: Regularizer initialized 422: >> Checking JH allocation 422: BSPLINE PARMS 422: max_its = 5 422: max_feval = 5 422: BSPLINE XFORM HEADER 422: vox_per_rgn = 5 5 5 422: roi_offset = 0 0 0 422: roi_dim = 15 25 15 422: img_dc = 1 0 0 0 1 0 0 0 1 422: BST METRICS 422: MET 110100 MSE 1.000000 422: Setting nmax, mmax = 864 31 422: >>> START 422: This problem is unconstrained. 422: [ 0, 0] SCORE 2070.753 NV 5316 GM -1231.525 GN 432 [ 0.034 s ] 422: MSE 2064.967 RM 5.786 [ 0.012 | 0.022 ] 422: CMIN -8.62 CAVG -0.39 CMAX 1.40 422: LSD 0.00 422: [ 0, 1] SCORE 1741.366 NV 5318 GM -709.336 GN 291 [ 0.027 s ] 422: MSE 1736.001 RM 5.365 [ 0.014 | 0.013 ] 422: CMIN -8.13 CAVG -0.39 CMAX 1.38 422: LSD 1.00 422: [ 1, 2] SCORE 1448.726 NV 5351 GM 553.138 GN 184 [ 0.039 s ] 422: MSE 1444.063 RM 4.664 [ 0.020 | 0.018 ] 422: CMIN -7.05 CAVG -0.38 CMAX 1.33 422: LSD 2.47 422: [ 2, 3] SCORE 1411.069 NV 5344 GM 258.307 GN 92.3 [ 0.025 s ] 422: MSE 1406.122 RM 4.946 [ 0.011 | 0.014 ] 422: CMIN -7.20 CAVG -0.39 CMAX 1.33 422: LSD 0.62 422: [ 3, 4] SCORE 1391.029 NV 5340 GM -132.885 GN 63.2 [ 0.022 s ] 422: MSE 1385.782 RM 5.247 [ 0.012 | 0.010 ] 422: CMIN -7.41 CAVG -0.39 CMAX 1.30 422: LSD 0.81 422: [ 4, 5] SCORE 1380.556 NV 5338 GM 21.541 GN 39.1 [ 0.025 s ] 422: MSE 1375.316 RM 5.240 [ 0.013 | 0.012 ] 422: CMIN -7.42 CAVG -0.39 CMAX 1.30 422: LSD 0.36 422: [2] xf_out->m_type = 9, xf_in->m_type = 9 422: Doing registration stage 422: [1] xf_in->m_type = 9, xf_out->m_type = 0 422: RESAMPLE 1 1: (2 2 2), (2 2 2) 422: RESAMPLE 1 1: (2 2 2), (2 2 2) 422: volume_calc_grad complete. 422: bspline_xform_initialize 422: rdims = (3,5,3) 422: vox_per_rgn = (5,5,5) 422: cdims = (6 8 6) 422: Algorithm flavor = g 422: Threading = 0 422: Regularization: flavor = c lambda = 0.100000 422: Regularizer initialized 422: >> Checking JH allocation 422: BSPLINE PARMS 422: max_its = 5 422: max_feval = 5 422: BSPLINE XFORM HEADER 422: vox_per_rgn = 5 5 5 422: roi_offset = 0 0 0 422: roi_dim = 15 25 15 422: img_dc = 1 0 0 0 1 0 0 0 1 422: BST METRICS 422: MET 110100 MSE 1.000000 422: Setting nmax, mmax = 864 31 422: >>> START 422: This problem is unconstrained. 422: [ 0, 0] SCORE 1380.556 NV 5338 GM 21.541 GN 39.1 [ 0.009 s ] 422: MSE 1375.316 RM 5.240 [ 0.006 | 0.003 ] 422: CMIN -7.42 CAVG -0.39 CMAX 1.30 422: LSD 0.00 422: [ 0, 1] SCORE 1360.810 NV 5336 GM 259.462 GN 115 [ 0.009 s ] 422: MSE 1355.755 RM 5.056 [ 0.004 | 0.005 ] 422: CMIN -7.23 CAVG -0.39 CMAX 1.32 422: LSD 1.00 422: [ 0, 2] SCORE 1363.081 NV 5336 GM 215.275 GN 64.4 [ 0.009 s ] 422: MSE 1357.933 RM 5.148 [ 0.004 | 0.005 ] 422: CMIN -7.33 CAVG -0.39 CMAX 1.31 422: LSD 0.47 422: [ 1, 3] SCORE 1355.968 NV 5336 GM 93.286 GN 47.5 [ 0.009 s ] 422: MSE 1350.760 RM 5.209 [ 0.004 | 0.005 ] 422: CMIN -7.36 CAVG -0.39 CMAX 1.31 422: LSD 0.24 422: [ 2, 4] SCORE 1327.456 NV 5313 GM -133.711 GN 39.2 [ 0.008 s ] 422: MSE 1321.881 RM 5.575 [ 0.004 | 0.005 ] 422: CMIN -7.53 CAVG -0.39 CMAX 1.33 422: LSD 1.49 422: [ 3, 5] SCORE 1315.612 NV 5295 GM -129.321 GN 46.1 [ 0.008 s ] 422: MSE 1309.647 RM 5.965 [ 0.004 | 0.005 ] 422: CMIN -7.65 CAVG -0.40 CMAX 1.39 422: LSD 1.60 422: [2] xf_out->m_type = 9, xf_in->m_type = 9 422: RESTORE NATIVE RESOLUTION: (2 2 2), (1 1 1) 422: bspline_xform_initialize 422: rdims = (3,5,3) 422: vox_per_rgn = (10,10,10) 422: cdims = (6 8 6) 422: ** Registration worker thread finished. 422: Writing transformation ... 422: Warping... 422: Running: plm_warp_native 422: Converting input image... 422: Converting xform... 422: bspline_xform_initialize 422: rdims = (3,5,3) 422: vox_per_rgn = (10,10,10) 422: cdims = (6 8 6) 422: Creating output vf... 422: Creating output volume... 422: Running native warper... 422: bspline_warp complete. 422: Back convert to original type... 422: > Convert vf to itk 422: > Conversion complete. 422: plm_warp_native is complete. 422: Saving image... 422: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-e-img.mha 422: Saving vf... 422: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-reg-roi-e-vf.mha 422: Load: 0.0474491 422: Run: 0.624911 422: Save: 0.0153461 422: Total: 0.687706 422: Finished! 422: 422: STDERR: 422: Not an error 568/578 Test #422: plm-reg-roi-e ......................... Passed 0.89 sec 574: RETVAL: 0 574: STDOUT: 574: [PLAN] 574: patient : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/rect-17.mha 574: target : 574: dose_out : /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.mha 574: debug : 0 574: dose norm : 100 574: 574: [SETTINGS] 574: flavor: d ** 574: homo_approx: n ** 574: ray_step: 1 ** 574: aperture_out: ** 574: proj_dose_out: ** 574: proj_img_out: ** 574: range_comp_out: ** 574: sigma_out: ** 574: wed_out: ** 574: beam_weight: 1 ** 574: 574: [GEOMETRY & APERTURE] 574: source: 0 -2000 0 ** 574: isocenter: 0 0 0 ** 574: vup: 0 0 1 ** 574: offset: 1500 ** 574: ap_center in pixels: 20 20 ** 574: i_res: 41 41 ** 574: spacing: 3.75 3.75 ** 574: source_size: 0 ** 574: ap_file_in: ** 574: rc_file_in: ** 574: smearing: 5 ** 574: 574: [PEAK] 574: E0: P0 574: spread: P0 574: weight: P0 574: 574: Start dose calculation Beam 1 574: Plan_calc::compute_beam_dose(beam) entry -- 574: Setting RVRTS = 1 574: FPD = 347.500001, BPD = 649.116731 574: 41 41 302 574: Setting RVRTS = 1 574: FPD = 347.500001, BPD = 649.116731 574: 41 41 302 574: FPD = 347.500001, BPD = 649.116731 574: 41 41 302 574: Setting RVRTS = 1 574: FPD = 347.500001, BPD = 649.116731 574: 41 41 302 574: Priority 1. Beamlet map file detected: Any manual peaks set, depth prescription, target or range compensator will not be considered. 574: Dose is null in the entire volume. Please check your input conditions. 574: 1 x 100%. 574: Primary PB num. x, y: 41, 41, primary PB res. x, y: 0.266667 PB/mm, 0.266667 PB/mm 574: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.mha 574: Sigma: 0.000000 seconds 574: Calc: 0.077941 seconds 574: IO: 0.065939 seconds 574: Reformat: 0.011861 seconds 574: Misc: 0.003405 seconds 574: done. 574: 574: Total execution time : 0.159377 seconds. 574: 574: STDERR: 574: Not an error 569/578 Test #574: proton-dose-8d ........................ Passed 0.45 sec test 575 Start 575: proton-dose-8d-stats 575: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=proton-dose-8d-stats" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.mha" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 575: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 575: Test timeout computed to be: 1500 575: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 575: PARMS is stats;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/proton-dose-8d.mha 575: EXPECTED_ERRNO is 112: RETVAL: 0 112: STDOUT: MIN -1000.000000 AVE -999.848633 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600 112: 112: STDERR: 112: Not an error 570/578 Test #112: fdk-cpu-d-stats ....................... Passed 0.36 sec test 113 Start 113: fdk-cpu-d-check 113: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d-stats.stdout.txt" "-DREGEX=MAX *([-0-9.]*)" "-DLOWER_THRESH=-987.5" "-DUPPER_THRESH=-986.5" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckInterval.cmake" 113: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 113: Test timeout computed to be: 1500 113: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/fdk-cpu-d-stats.stdout.txt 113: -- REGEX is MAX *([-0-9.]*) 113: -- LOWER_THRESH is -987.5 113: -- UPPER_THRESH is -986.5 113: -- PARSED VALUE=|MIN -1000.000000 AVE -999.848633 MAX -987.021973 NONZERO 6553600 NUMVOX 6553600| 113: -- PARSED_VALUE=|-987.021973| 113: Not an error 571/578 Test #113: fdk-cpu-d-check ....................... Passed 0.02 sec 575: RETVAL: 0 575: STDOUT: MIN 0.000000 AVE 0.000000 MAX 0.000000 NONZERO 0 NUMVOX 216000 575: 575: STDERR: 575: Not an error 572/578 Test #575: proton-dose-8d-stats .................. Passed 0.17 sec 576: RETVAL: 0 576: STDOUT: Skin file defined. Modifying input ct... 576: FPD = 320.500029, BPD = 821.195355 576: 100 100 501 576: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.nrrd 576: Computing wed ct volume... 576: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-wed-ct.mha 576: done. 576: 100 100 501 576: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-ct.nrrd 576: 576: STDERR: 576: Not an error 573/578 Test #576: wed-a ................................. Passed 2.33 sec test 577 Start 577: wed-b 577: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=wed-b" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=wed;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-b.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 577: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 577: Test timeout computed to be: 1500 test 578 Start 578: wed-c 578: Test command: /usr/bin/cmake "-DPLM_TEST_NAME=wed-c" "-DPLM_TEST_COMMAND=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch" "-DPLM_TESTING_SOURCE_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing" "-DPLM_BUILD_TESTING_DIR=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing" "-DPARMS=wed;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-c.txt" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/cmake/RUN_CTEST.cmake" 578: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 578: Test timeout computed to be: 1500 577: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 577: PARMS is wed;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-b.txt 577: EXPECTED_ERRNO is 578: PLM_TEST_COMMAND is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/plastimatch 578: PARMS is wed;--command-file;/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-c.txt 578: EXPECTED_ERRNO is 578: RETVAL: 0 578: STDOUT: Loading rpl 578: -> /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.mha 578: -> /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.mha-> /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.mha.projv 578: Error opening /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.mha.projv for readCouldn't open /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.mha.nrrd for read 578: Done. 578: Skin file defined. Modifying input ct... 578: FPD = 320.500029, BPD = 821.195355 578: 100 100 501 578: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-c-dew-ct.mha 578: 578: STDERR: 578: Not an error 574/578 Test #578: wed-c ................................. Passed 0.59 sec 577: RETVAL: 0 577: STDOUT: Loading rpl 577: -> /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.rpl 577: -> /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed-> /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-a-proj-wed.projv 577: Error loading projv file 577: image_dim=100 100 577: Done. 577: Skin file defined. Modifying input ct... 577: FPD = 320.500029, BPD = 821.195355 577: 100 100 501 577: Computing wed ct volume... 577: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-b-wed-ct.mha 577: done. 577: 100 100 501 577: Trying to write image to /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/wed-b-proj-ct.nrrd 577: 577: STDERR: 577: Not an error 575/578 Test #577: wed-b ................................. Passed 1.27 sec 471: RETVAL: 0 471: STDOUT: Contrast threshold = 0.030000 471: Curvature threshold = 172.302505 471: Computing Octave Level 0... (100 100 100 ...Computing Gradient......Done 471: Setting Up Gaussian Filter 0-0...scale: 0 sigma: 2 471: Setting Up Gaussian Filter 0-1...scale: 1 sigma: 1.53284 471: Done 471: Setting Up DoG Filter 0-1...Done 471: Setting Up Gaussian Filter 0-2...scale: 2 sigma: 1.93126 471: Done 471: Setting Up DoG Filter 0-2...Done 471: Setting Up Gaussian Filter 0-3...scale: 3 sigma: 2.43323 471: Done 471: Setting Up DoG Filter 0-3...Done 471: Setting Up Gaussian Filter 0-4...scale: 4 sigma: 3.06568 471: Done 471: Setting Up DoG Filter 0-4...Done 471: Setting Up Gaussian Filter 0-5...scale: 5 sigma: 3.86252 471: Done 471: Setting Up DoG Filter 0-5...Done 471: Searching for Extrema in DoG Image 0-1 ( 100 100 100 ) Scale 0.5 471: Acc. Num Max: 0 471: Acc. Num Min: 0 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 0-2 ( 100 100 100 ) Scale 0.5 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 0-3 ( 100 100 100 ) Scale 0.5 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Computing Octave Level 1... (50 50 50 ...Computing Gradient......Done 471: Setting Up Gaussian Filter 1-0...scale: 0 sigma: 2 471: Setting Up Gaussian Filter 1-1...scale: 1 sigma: 1.53284 471: Done 471: Setting Up DoG Filter 1-1...Done 471: Setting Up Gaussian Filter 1-2...scale: 2 sigma: 1.93126 471: Done 471: Setting Up DoG Filter 1-2...Done 471: Setting Up Gaussian Filter 1-3...scale: 3 sigma: 2.43323 471: Done 471: Setting Up DoG Filter 1-3...Done 471: Setting Up Gaussian Filter 1-4...scale: 4 sigma: 3.06568 471: Done 471: Setting Up DoG Filter 1-4...Done 471: Setting Up Gaussian Filter 1-5...scale: 5 sigma: 3.86252 471: Done 471: Setting Up DoG Filter 1-5...Done 471: Searching for Extrema in DoG Image 1-1 ( 50 50 50 ) Scale 1 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 1-2 ( 50 50 50 ) Scale 1 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 1-3 ( 50 50 50 ) Scale 1 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Computing Octave Level 2... (25 25 25 ...Computing Gradient......Done 471: Setting Up Gaussian Filter 2-0...scale: 0 sigma: 2 471: Setting Up Gaussian Filter 2-1...scale: 1 sigma: 1.53284 471: Done 471: Setting Up DoG Filter 2-1...Done 471: Setting Up Gaussian Filter 2-2...scale: 2 sigma: 1.93126 471: Done 471: Setting Up DoG Filter 2-2...Done 471: Setting Up Gaussian Filter 2-3...scale: 3 sigma: 2.43323 471: Done 471: Setting Up DoG Filter 2-3...Done 471: Setting Up Gaussian Filter 2-4...scale: 4 sigma: 3.06568 471: Done 471: Setting Up DoG Filter 2-4...Done 471: Setting Up Gaussian Filter 2-5...scale: 5 sigma: 3.86252 471: Done 471: Setting Up DoG Filter 2-5...Done 471: Searching for Extrema in DoG Image 2-1 ( 25 25 25 ) Scale 2 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 2-2 ( 25 25 25 ) Scale 2 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 2-3 ( 25 25 25 ) Scale 2 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Total Num Max: 0 471: Total Num Min: 24 471: Total Num Reject: 0 471: Contrast threshold = 0.030000 471: Curvature threshold = 172.302505 471: Computing Octave Level 0... (100 100 100 ...Computing Gradient......Done 471: Setting Up Gaussian Filter 0-0...scale: 0 sigma: 2 471: Setting Up Gaussian Filter 0-1...scale: 1 sigma: 1.53284 471: Done 471: Setting Up DoG Filter 0-1...Done 471: Setting Up Gaussian Filter 0-2...scale: 2 sigma: 1.93126 471: Done 471: Setting Up DoG Filter 0-2...Done 471: Setting Up Gaussian Filter 0-3...scale: 3 sigma: 2.43323 471: Done 471: Setting Up DoG Filter 0-3...Done 471: Setting Up Gaussian Filter 0-4...scale: 4 sigma: 3.06568 471: Done 471: Setting Up DoG Filter 0-4...Done 471: Setting Up Gaussian Filter 0-5...scale: 5 sigma: 3.86252 471: Done 471: Setting Up DoG Filter 0-5...Done 471: Searching for Extrema in DoG Image 0-1 ( 100 100 100 ) Scale 0.5 471: Acc. Num Max: 0 471: Acc. Num Min: 0 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 0-2 ( 100 100 100 ) Scale 0.5 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 0-3 ( 100 100 100 ) Scale 0.5 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Computing Octave Level 1... (50 50 50 ...Computing Gradient......Done 471: Setting Up Gaussian Filter 1-0...scale: 0 sigma: 2 471: Setting Up Gaussian Filter 1-1...scale: 1 sigma: 1.53284 471: Done 471: Setting Up DoG Filter 1-1...Done 471: Setting Up Gaussian Filter 1-2...scale: 2 sigma: 1.93126 471: Done 471: Setting Up DoG Filter 1-2...Done 471: Setting Up Gaussian Filter 1-3...scale: 3 sigma: 2.43323 471: Done 471: Setting Up DoG Filter 1-3...Done 471: Setting Up Gaussian Filter 1-4...scale: 4 sigma: 3.06568 471: Done 471: Setting Up DoG Filter 1-4...Done 471: Setting Up Gaussian Filter 1-5...scale: 5 sigma: 3.86252 471: Done 471: Setting Up DoG Filter 1-5...Done 471: Searching for Extrema in DoG Image 1-1 ( 50 50 50 ) Scale 1 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 1-2 ( 50 50 50 ) Scale 1 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 1-3 ( 50 50 50 ) Scale 1 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Computing Octave Level 2... (25 25 25 ...Computing Gradient......Done 471: Setting Up Gaussian Filter 2-0...scale: 0 sigma: 2 471: Setting Up Gaussian Filter 2-1...scale: 1 sigma: 1.53284 471: Done 471: Setting Up DoG Filter 2-1...Done 471: Setting Up Gaussian Filter 2-2...scale: 2 sigma: 1.93126 471: Done 471: Setting Up DoG Filter 2-2...Done 471: Setting Up Gaussian Filter 2-3...scale: 3 sigma: 2.43323 471: Done 471: Setting Up DoG Filter 2-3...Done 471: Setting Up Gaussian Filter 2-4...scale: 4 sigma: 3.06568 471: Done 471: Setting Up DoG Filter 2-4...Done 471: Setting Up Gaussian Filter 2-5...scale: 5 sigma: 3.86252 471: Done 471: Setting Up DoG Filter 2-5...Done 471: Searching for Extrema in DoG Image 2-1 ( 25 25 25 ) Scale 2 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 2-2 ( 25 25 25 ) Scale 2 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Searching for Extrema in DoG Image 2-3 ( 25 25 25 ) Scale 2 471: Acc. Num Max: 0 471: Acc. Num Min: 24 471: Acc. Num Reject: 0 471: Total Num Max: 0 471: Total Num Min: 24 471: Total Num Reject: 0 471: Keypoints1 Found: 24 471: Keypoints2 Found: 24 471: ***Keypoint Matches*** 471: [7.5, -7.5, -17.5] => [7.5, -7.5, -22.5] 471: [-7.5, 7.5, -17.5] => [-7.5, 7.5, -22.5] 471: [7.5, 7.5, -17.5] => [7.5, 7.5, -22.5] 471: [-7.5, -17.5, -7.5] => [-7.5, -17.5, -12.5] 471: [7.5, -17.5, -7.5] => [7.5, -17.5, -12.5] 471: [-17.5, -7.5, -7.5] => [-17.5, -7.5, -12.5] 471: [17.5, -7.5, -7.5] => [17.5, -7.5, -12.5] 471: [-17.5, 7.5, -7.5] => [-17.5, 7.5, -12.5] 471: [17.5, 7.5, -7.5] => [17.5, 7.5, -12.5] 471: [-7.5, 17.5, -7.5] => [-7.5, 17.5, -12.5] 471: [7.5, 17.5, -7.5] => [7.5, 17.5, -12.5] 471: [-7.5, -17.5, 7.5] => [-7.5, -17.5, 2.5] 471: [7.5, -17.5, 7.5] => [7.5, -17.5, 2.5] 471: [-17.5, -7.5, 7.5] => [-17.5, -7.5, 2.5] 471: [17.5, -7.5, 7.5] => [17.5, -7.5, 2.5] 471: [-17.5, 7.5, 7.5] => [-17.5, 7.5, 2.5] 471: [17.5, 7.5, 7.5] => [17.5, 7.5, 2.5] 471: [-7.5, 17.5, 7.5] => [-7.5, 17.5, 2.5] 471: [7.5, 17.5, 7.5] => [7.5, 17.5, 2.5] 471: [-7.5, -7.5, 17.5] => [-7.5, -7.5, 12.5] 471: [7.5, -7.5, 17.5] => [7.5, -7.5, 12.5] 471: [-7.5, 7.5, 17.5] => [-7.5, 7.5, 12.5] 471: [7.5, 7.5, 17.5] => [7.5, 7.5, 12.5] 471: 471: ***Features Matches: 23 471: 471: STDERR: 471: Not an error 576/578 Test #471: plm-sift-a ............................ Passed 5.48 sec test 472 Start 472: plm-sift-a-check-1 472: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-1.fcsv" "-DREGEX=^p1-1,(.*)" "-DMATCH_STRING=-7.500,7.500,-17.500" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckString.cmake" 472: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 472: Test timeout computed to be: 1500 test 473 Start 473: plm-sift-a-check-2 473: Test command: /usr/bin/cmake "-DINFILE=/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-2.fcsv" "-DREGEX=^p1-1,(.*)" "-DMATCH_STRING=-7.500,7.500,-22.500" "-P" "/build/reproducible-path/plastimatch-1.9.4+dfsg.1/Testing/PlmCheckString.cmake" 473: Working Directory: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing 473: Test timeout computed to be: 1500 472: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-1.fcsv 472: -- REGEX is ^p1-1,(.*) 472: -- MATCH_STRING is -7.500,7.500,-17.500 472: -- PARSED VALUE=|p1-1,-7.500,7.500,-17.500| 472: -- PARSED_VALUE=|-7.500,7.500,-17.500| 472: -- LENGTH=20 472: -- |-7.500,7.500,-17.500|-7.500,7.500,-17.500| 472: Not an error 473: -- INFILE is /build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu/Testing/plm-sift-a-match-2.fcsv 473: -- REGEX is ^p1-1,(.*) 473: -- MATCH_STRING is -7.500,7.500,-22.500 473: -- PARSED VALUE=|p1-1,-7.500,7.500,-22.500| 473: -- PARSED_VALUE=|-7.500,7.500,-22.500| 473: -- LENGTH=20 473: -- |-7.500,7.500,-22.500|-7.500,7.500,-22.500| 473: Not an error 577/578 Test #472: plm-sift-a-check-1 .................... Passed 0.02 sec 578/578 Test #473: plm-sift-a-check-2 .................... Passed 0.01 sec 100% tests passed, 0 tests failed out of 578 Total Test time (real) = 10.83 sec make[2]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1' dh_auto_install cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/plastimatch-1.9.4\+dfsg.1/debian/plastimatch AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/plastimatch-1.9.4+dfsg.1 -B/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RELEASE" -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/share/doc/plastimatch/README.TXT -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/share/doc/plastimatch/COPYRIGHT.TXT -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/liblbfgs.a -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libdevillard.a -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libinih.a -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libspecfun.a -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libnkidecompress.a -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends-release.cmake -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfigVersion.cmake -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmbase.so.1.9 -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmbase.so -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmbase_config.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/aperture.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/astroid_dose.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/beam_geometry.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_header.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_interpolate.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform_legacy.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_io.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_stats.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkAndConstantToImageFilter.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_bbox.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_clone.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_header_compare.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_load.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_origin.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_shift_scale.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_type.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/make_string.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/mc_dose.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/metadata.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/mha_io.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/nki_io.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_p.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_set.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset_warp.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_volume.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/pwlut.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_probe.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume_lut.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_beam.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/segmentation.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_img_extract.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_jacobian.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_stats.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_behavior.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_conv.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_gaussian.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_stats.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct_transform.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_demographic.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_patient.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_structures.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_studyset.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtplan.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_util.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmsys.so.1.9 -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmsys.so -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_config.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmsys_config.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dlib_threads.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/path_util.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_fwrite.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_va_copy.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/string_util.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload_legacy.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmutil.so.1.9 -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmutil.so -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmutil_config.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dvh.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/hausdorff_distance.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_boundary.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_adjust.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_histogram_matching.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_intersect.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_local_intensity_correction.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_union.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_warp.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_adjust.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_type.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xf_invert.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/zcrop.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/gabor.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/bin/plastimatch -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmdose.so.1.9 -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmdose.so -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmreconstruct.so.1.9 -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmreconstruct.so -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmregister.so.1.9 -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmregister.so -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmsegment.so.1.9 -- Installing: /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libplmsegment.so make[2]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/obj-x86_64-linux-gnu' rm -rfv /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/*.a removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libdevillard.a' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libinih.a' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/liblbfgs.a' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libnkidecompress.a' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/libspecfun.a' rm -rfv /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends-release.cmake' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfigVersion.cmake' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchConfig.cmake' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch/PlastimatchLibraryDepends.cmake' removed directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake/plastimatch' removed directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/lib/cmake' rm -rfv /build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_metadata.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_return_code.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_union.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_probe.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_region.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/geometry_chooser.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_save.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/gaussian.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/parameter_parser.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_matrices.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_sleep.h' removed 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'/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_warp.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_endian.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_file.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume_lut.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtss.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm_p.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/direction_cosines.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/print_and_exit.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_interpolate.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_volume_header.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rpl_volume.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_exception.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterize_slice.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_set.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_extract.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_warp.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/gabor.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rtdose.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_pointset.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_macros.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_itk.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_roi.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/threading.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_limit.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/delayload.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_module.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_timer_p.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/compiler_warnings.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_callback.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plmutil_config.h' removed 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'/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_fill.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_macros.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io_p.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_uid_prefix.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_resample.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_legacy.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_directions.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series_map.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/slice_list.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dlib_threads.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_metadata.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_boundary.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_patient.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_math.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/nki_io.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_trace_probe.h' removed 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'/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_bbox.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/gamma_dose_comparison.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ramp_filter.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/float_pair_list.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dice_statistics.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_point.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_int.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_ct.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkClampCastImageFilter.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study_p.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_matrix.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_grad.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rdd.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/logfile.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_file_format.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dose.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_plan.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_point.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_intersect.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/cxt_extract.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_shift_scale.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_stats.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_create.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_type.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_p.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/raw_pointset.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan_control_pt.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ray_data.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_sro.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_header_compare.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/option_range.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/ss_list_io.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/hnd_io.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/smart_pointer.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/pointset.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtss_contour.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_stats.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf_convolve.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rasterizer.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform_convert.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_header.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xf_invert.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/double_align8.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dicom_util.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_type.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_resample.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xio_dir.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_histogram_matching.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_header.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_cast.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rt_study_warp.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_series.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_metadata.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/volume_boundary_behavior.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_warp.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/clamp.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/rtplan.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_uid.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/interpolate_macros.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xpm.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/vf.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/proj_image_dir.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itkAndConstantToImageFilter.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/bspline_xform.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_local_intensity_correction.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/file_util.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/plm_image_header.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_rt_study.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/thumbnail.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/itk_image_accumulate.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dcmtk_config.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/dir_list.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/xform.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/image_center.h' removed '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch/zcrop.h' removed directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include/plastimatch' removed directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1/debian/plastimatch/usr/include' make[1]: Leaving directory '/build/reproducible-path/plastimatch-1.9.4+dfsg.1' dh_installdocs dh_installchangelogs dh_installman dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: deprecated use of LD_LIBRARY_PATH with private library directory which interferes with cross-building, please use -l option instead dpkg-shlibdeps: warning: deprecated use of LD_LIBRARY_PATH with private library directory which interferes with cross-building, please use -l option instead dpkg-shlibdeps: warning: deprecated use of LD_LIBRARY_PATH with private library directory which interferes with cross-building, please use -l option instead dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'plastimatch' in '../plastimatch_1.9.4+dfsg.1-3_amd64.deb'. dpkg-deb: building package 'plastimatch-dbgsym' in '../plastimatch-dbgsym_1.9.4+dfsg.1-3_amd64.deb'. dpkg-genbuildinfo --build=binary -O../plastimatch_1.9.4+dfsg.1-3_amd64.buildinfo dpkg-genchanges --build=binary -O../plastimatch_1.9.4+dfsg.1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/922745 and its subdirectories I: Current time: Sun Feb 15 22:19:32 -12 2026 I: pbuilder-time-stamp: 1771237172 Tue Jan 14 03:56:34 UTC 2025 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Tue Jan 14 03:56:34 UTC 2025 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Tue Jan 14 04:24:08 UTC 2025 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Tue Jan 14 04:24:09 UTC 2025 I: plastimatch_1.9.4+dfsg.1-3_amd64.changes: Format: 1.8 Date: Fri, 26 Jul 2024 10:31:35 +0200 Source: plastimatch Binary: plastimatch plastimatch-dbgsym Architecture: amd64 Version: 1.9.4+dfsg.1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Pierre Gruet Description: plastimatch - medical image reconstruction and registration Closes: 1075793 Changes: plastimatch (1.9.4+dfsg.1-3) unstable; urgency=medium . * Team upload * Removing obsolete RTSTRUCT DICOM tags to build against DCMTK/3.6.8 (Closes: #1075793) * Raising Standards version to 4.7.0 (no change) * Fixing d/watch file after change in Gitlab's layout Checksums-Sha1: 6c834b1bda5f414b048217ff2df434560f09d340 67103080 plastimatch-dbgsym_1.9.4+dfsg.1-3_amd64.deb b331a5d970348d18b35279cf7f62d468507be4d2 27173 plastimatch_1.9.4+dfsg.1-3_amd64.buildinfo 20708699568a0a7f3deb3df65ae9c52b24e9ab0e 3055312 plastimatch_1.9.4+dfsg.1-3_amd64.deb Checksums-Sha256: b061aee9c84784b75777e616a838a84a597662541d735660c7a1d1a81220d192 67103080 plastimatch-dbgsym_1.9.4+dfsg.1-3_amd64.deb 8ec3243727a246f7cd7bb53395ca608d23feb18c20777fbcf9e86d2bb39dcc1c 27173 plastimatch_1.9.4+dfsg.1-3_amd64.buildinfo 6dad9a36fb05cef3f6e47fae0d434c0256aa016e1f10a67b72fc4a8452603281 3055312 plastimatch_1.9.4+dfsg.1-3_amd64.deb Files: 83e918e9e41578ac2ae2115295afc93e 67103080 debug optional plastimatch-dbgsym_1.9.4+dfsg.1-3_amd64.deb 671afaef0ae56d9150f8c79ed752b3fd 27173 science optional plastimatch_1.9.4+dfsg.1-3_amd64.buildinfo 345b6704ef58767368401213a50564e9 3055312 science optional plastimatch_1.9.4+dfsg.1-3_amd64.deb Tue Jan 14 04:24:11 UTC 2025 I: diffoscope 284 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_10-28070.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.OHZfhANt/plastimatch_1.9.4+dfsg.1-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.OHZfhANt/plastimatch_1.9.4+dfsg.1-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.OHZfhANt/plastimatch_1.9.4+dfsg.1-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.OHZfhANt/b1/plastimatch_1.9.4+dfsg.1-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.OHZfhANt/b2/plastimatch_1.9.4+dfsg.1-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 1.021s) 1.021s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.720s) 0.720s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1.303s CPU time consumed: 1.254s Tue Jan 14 04:24:13 UTC 2025 I: diffoscope 284 found no differences in the changes files, and a .buildinfo file also exists. Tue Jan 14 04:24:13 UTC 2025 I: plastimatch from unstable built successfully and reproducibly on amd64. Tue Jan 14 04:24:15 UTC 2025 I: Submitting .buildinfo files to external archives: Tue Jan 14 04:24:15 UTC 2025 I: Submitting 28K b1/plastimatch_1.9.4+dfsg.1-3_amd64.buildinfo.asc Tue Jan 14 04:24:16 UTC 2025 I: Submitting 28K b2/plastimatch_1.9.4+dfsg.1-3_amd64.buildinfo.asc Tue Jan 14 04:24:17 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Jan 14 04:24:17 UTC 2025 I: Done submitting .buildinfo files. Tue Jan 14 04:24:17 UTC 2025 I: Removing signed plastimatch_1.9.4+dfsg.1-3_amd64.buildinfo.asc files: removed './b1/plastimatch_1.9.4+dfsg.1-3_amd64.buildinfo.asc' removed './b2/plastimatch_1.9.4+dfsg.1-3_amd64.buildinfo.asc'